-
1
-
-
15944402920
-
Small regulatory RNAs in mammals
-
DOI 10.1093/hmg/ddi101
-
Mattick JS, Makunin I V. Small regulatory RNAs in mammals. Hum Mol Genet 2005; 14(Spec No 1):R121-32; PMID:15809264; http://dx.doi. org/10.1093/hmg/ ddi101. (Pubitemid 40542628)
-
(2005)
Human Molecular Genetics
, vol.14
, Issue.SPEC. ISS. 1
-
-
Mattick, J.S.1
Makunin, I.V.2
-
2
-
-
20644449571
-
An abundance of RNA regulators
-
DOI 10.1146/annurev.biochem.74.082803.133136
-
Storz G, Altuvia S, Wassarman KM. An abundance of RNA regulators. Annu Rev Biochem 2005; 74:199-217; PMID:15952886; http://dx.doi.org/10.1146/annurev. biochem.74.082803.133136. (Pubitemid 40995506)
-
(2005)
Annual Review of Biochemistry
, vol.74
, pp. 199-217
-
-
Storz, G.1
Altuvia, S.2
Wassarman, K.M.3
-
3
-
-
33745586429
-
Versatile roles of small RNA regulators in bacteria
-
Storz G, Gottesman S. Versatile roles of small RNA regulators in bacteria. The RNA world 3rd ed 2006; 567-94.
-
(2006)
The RNA World 3rd Ed
, pp. 567-594
-
-
Storz, G.1
Gottesman, S.2
-
4
-
-
77955155869
-
Base pairing small RNAs and their roles in global regulatory networks
-
PMID:20662934
-
Beisel CL, Storz G. Base pairing small RNAs and their roles in global regulatory networks. FEMS Microbiol Rev 2010; 34:866-82; PMID:20662934.
-
(2010)
FEMS Microbiol Rev
, vol.34
, pp. 866-882
-
-
Beisel, C.L.1
Storz, G.2
-
5
-
-
34247158257
-
Mechanism of RNA silencing by Hfq-binding small RNAs
-
DOI 10.1016/j.mib.2007.03.010, PII S1369527407000276, Cell Regulation (RNA Special Issue)
-
Aiba H. Mechanism of RNA silencing by Hfq-binding small RNAs. Curr Opin Microbiol 2007; 10:134-9; PMID:17383928; http://dx.doi.org/10.1016/j. mib.2007.03.010. (Pubitemid 46590050)
-
(2007)
Current Opinion in Microbiology
, vol.10
, Issue.2
, pp. 134-139
-
-
Aiba, H.1
-
6
-
-
84863924309
-
Bacterial small RNA regulators: Versatile roles and rapidly evolving variations
-
PMID:20980440
-
Gottesman S, Storz G. Bacterial small RNA regulators: versatile roles and rapidly evolving variations. Cold Spring Harb Perspect Biol 2011; 3:a003798; PMID:20980440; http://dx.doi.org/10.1101/cshper-spect.a003798.
-
(2011)
Cold Spring Harb Perspect Biol
, vol.3
-
-
Gottesman, S.1
Storz, G.2
-
7
-
-
0036371843
-
Antisense RNAs in bacteria and their genetic elements
-
PMID:11931231
-
Wagner EG, Altuvia S, Romby P. Antisense RNAs in bacteria and their genetic elements. Adv Genet 2002; 46:361-98; PMID:11931231; http://dx.doi. org/10.1016/S0065-2660(02)46013-0.
-
(2002)
Adv Genet
, vol.46
, pp. 361-398
-
-
Wagner, E.G.1
Altuvia, S.2
Romby, P.3
-
8
-
-
34247099372
-
Regulatory mechanisms employed by cis-encoded antisense RNAs
-
DOI 10.1016/j.mib.2007.03.012, PII S136952740700029X, Cell Regulation (RNA Special Issue)
-
Brantl S. Regulatory mechanisms employed by cis-encoded antisense RNAs. Curr Opin Microbiol 2007; 10:102-9; PMID:17387036; http://dx.doi. org/10.1016/j.mib.2007.03.012. (Pubitemid 46590052)
-
(2007)
Current Opinion in Microbiology
, vol.10
, Issue.2
, pp. 102-109
-
-
Brantl, S.1
-
9
-
-
0019547284
-
Inhibition of ColE1 RNA primer formation by a plasmid-specified small RNA
-
PMID:6165011
-
Tomizawa J, Itoh T, Selzer G, Som T. Inhibition of ColE1 RNA primer formation by a plasmid-specified small RNA. Proc Natl Acad Sci USA 1981; 78:1421-5; PMID:6165011; http://dx.doi.org/10.1073/pnas.78.3.1421.
-
(1981)
Proc Natl Acad Sci USA
, vol.78
, pp. 1421-1425
-
-
Tomizawa, J.1
Itoh, T.2
Selzer, G.3
Som, T.4
-
10
-
-
0031455172
-
Antisense RNA-regulated programmed cell death
-
DOI 10.1146/annurev.genet.31.1.1
-
Gerdes K, Gultyaev A P, Franch T, Pedersen K, Mikkelsen ND. Antisense RNA-regulated programmed cell death. Annu Rev Genet 1997; 31:1-31; PMID:9442888; http://dx.doi.org/10.1146/annurev. genet.31.1.1. (Pubitemid 28023700)
-
(1997)
Annual Review of Genetics
, vol.31
, pp. 1-31
-
-
Gerdes, K.1
Gultyaev, A.P.2
Franck, T.3
Pedersen, K.4
Mikkelsen, N.D.5
-
12
-
-
0028963606
-
Programmed cell death in bacterial populations
-
PMID:7846528
-
Yarmolinsky MB. Programmed cell death in bacterial populations. Science 1995; 267:836-7; PMID:7846528; http://dx.doi.org/10.1126/sci-ence.7846528.
-
(1995)
Science
, vol.267
, pp. 836-837
-
-
Yarmolinsky, M.B.1
-
13
-
-
0033036731
-
Multiple hok genes on the chromosome of Escherichia coli
-
DOI 10.1046/j.1365-2958.1999.01431.x
-
Pedersen K, Gerdes K. Multiple hok genes on the chromosome of Escherichia coli. Mol Microbiol 1999; 32:1090-102; PMID:10361310; http://dx.doi. org/10.1046/j.1365-2958.1999.01431.x. (Pubitemid 29255774)
-
(1999)
Molecular Microbiology
, vol.32
, Issue.5
, pp. 1090-1102
-
-
Pedersen, K.1
Gerdes, K.2
-
14
-
-
0036062728
-
Molecular characterization of long direct repeat (LDR) sequences expressing a stable mRNA encoding for a 35-amino-acid cell-killing peptide and a cis-encoded small antisense RNA in Escherichia coli
-
DOI 10.1046/j.1365-2958.2002.03042.x
-
Kawano M, Oshima T, Kasai H, Mori H. Molecular characterization of long direct repeat (LDR) sequences expressing a stable mRNA encoding for a 35-ami-no-acid cell-killing peptide and a cis-encoded small antisense RNA in Escherichia coli. Mol Microbiol 2002; 45:333-49; PMID:12123448; http://dx.doi. org/10.1046/j.1365-2958.2002.03042.x. (Pubitemid 34779828)
-
(2002)
Molecular Microbiology
, vol.45
, Issue.2
, pp. 333-349
-
-
Kawano, M.1
Oshima, T.2
Kasai, H.3
Mori, H.4
-
15
-
-
33845623300
-
Competitive inhibition of natural antisense Sok-RNA interactions activates Hok-mediated cell killing in Escherichia coli
-
DOI 10.1093/nar/gkl750
-
Faridani OR, Nikravesh A, Pandey D P, Gerdes K, Good L. Competitive inhibition of natural antisense Sok-RNA interactions activates Hok-mediated cell killing in Escherichia coli. Nucleic Acids Res 2006; 34:5915-22; PMID:17065468; http://dx.doi.org/10.1093/nar/gkl750. (Pubitemid 44941170)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.20
, pp. 5915-5922
-
-
Faridani, O.R.1
Nikravesh, A.2
Pandey, D.P.3
Gerdes, K.4
Good, L.5
-
16
-
-
34247148876
-
RNA antitoxins
-
DOI 10.1016/j.mib.2007.03.003, PII S1369527407000203, Cell Regulation (RNA Special Issue)
-
Gerdes K, Wagner EG. RNA antitoxins. Curr Opin Microbiol 2007; 10:117-24; PMID:17376733; http://dx.doi.org/10.1016/j.mib.2007.03.003. (Pubitemid 46590043)
-
(2007)
Current Opinion in Microbiology
, vol.10
, Issue.2
, pp. 117-124
-
-
Gerdes, K.1
Wagner, E.G.H.2
-
17
-
-
34247489752
-
An antisense RNA controls synthesis of an SOS-induced toxin evolved from an antitoxin
-
DOI 10.1111/j.1365-2958.2007.05688.x
-
Kawano M, Aravind L, Storz G. An antisense RNA controls synthesis of an SOS-induced toxin evolved from an antitoxin. Mol Microbiol 2007; 64:738-54; PMID:17462020; http://dx.doi.org/10.1111/j.1365-2958.2007.05688.x. (Pubitemid 46653211)
-
(2007)
Molecular Microbiology
, vol.64
, Issue.3
, pp. 738-754
-
-
Kawano, M.1
Aravind, L.2
Storz, G.3
-
18
-
-
80755144025
-
Toxin-antitoxin systems in bacteria and archaea
-
PMID:22060041
-
Yamaguchi Y, Park JH, Inouye M. Toxin-antitoxin systems in bacteria and archaea. Annu Rev Genet 2011; 45:61-79; PMID:22060041; http://dx.doi. org/10.1146/annurev-genet-110410-132412.
-
(2011)
Annu Rev Genet
, vol.45
, pp. 61-79
-
-
Yamaguchi, Y.1
Park, J.H.2
Inouye, M.3
-
19
-
-
80053474881
-
Toxins-antitoxins: Diversity, evolution and function
-
PMID:21819231
-
Hayes F, Van Melderen L. Toxins-antitoxins: diversity, evolution and function. Crit Rev Biochem Mol Biol 2011; 46:386-408; PMID:21819231; http://dx.doi.org/10.3109/10409238.2011.600437.
-
(2011)
Crit Rev Biochem Mol Biol
, vol.46
, pp. 386-408
-
-
Hayes, F.1
Van Melderen, L.2
-
20
-
-
0021992145
-
Stable inheritance of plasmid R1 requires two different loci
-
Gerdes K, Larsen JE, Molin S. Stable inheritance of plasmid R1 requires two different loci. J Bacteriol 1985; 161:292-8; PMID:2981804. (Pubitemid 15157342)
-
(1985)
Journal of Bacteriology
, vol.161
, Issue.1
, pp. 292-298
-
-
Gerdes, K.1
Larsen, J.E.L.2
Molin, S.3
-
21
-
-
0023901767
-
Nucleotide sequence and transcriptional analysis of a third function (Flm) involved in F-plasmid maintenance
-
PMID:3049248
-
Loh SM, Cram DS, Skurray RA. Nucleotide sequence and transcriptional analysis of a third function (Flm) involved in F-plasmid maintenance. Gene 1988; 66:259-68; PMID:3049248; http://dx.doi. org/10.1016/0378-1119(88)90362-9.
-
(1988)
Gene
, vol.66
, pp. 259-268
-
-
Loh, S.M.1
Cram, D.S.2
Skurray, R.A.3
-
22
-
-
0024098379
-
The F factor of Escherichia coli carries a locus of stable plasmid inheritance stm, similar to the parB locus of plasmid RI
-
PMID:3070354
-
Golub EI, Panzer HA. The F factor of Escherichia coli carries a locus of stable plasmid inheritance stm, similar to the parB locus of plasmid RI. Mol Gen Genet 1988; 214:353-7; PMID:3070354; http://dx.doi.org/10.1007/BF00337735.
-
(1988)
Mol Gen Genet
, vol.214
, pp. 353-357
-
-
Golub, E.I.1
Panzer, H.A.2
-
23
-
-
0016439430
-
F factor promotes turnover of stable RNA in escherichia coli
-
PMID:1089310
-
Onishi Y. F factor promotes turnover of stable RNA in escherichia coli. Science 1975; 187:257-8; PMID:1089310; http://dx.doi.org/10.1126/sci-ence. 1089310.
-
(1975)
Science
, vol.187
, pp. 257-258
-
-
Onishi, Y.1
-
24
-
-
0017761812
-
Genetic mapping of the F plasmid gene that promotes degradation of stable ribonucleic acid in Escherichia coli
-
Ohnishi Y, Iguma H, Ono T, Nagaishi H, Clark AJ. Genetic mapping of the F plasmid gene that promotes degradation of stable ribonucleic acid in Escherichia coli. J Bacteriol 1977; 132:784-9; PMID:336605. (Pubitemid 8241646)
-
(1977)
Journal of Bacteriology
, vol.132
, Issue.3
, pp. 784-789
-
-
Ohnishi, Y.1
Iguma, H.2
Ono, T.3
-
25
-
-
0019258811
-
I-like R plasmids promote degradation of stable ribonucleic acid in Escherichia coli
-
Ohnishi Y, Akimoto S. I-like R plasmids promote degradation of stable ribonucleic acid in Escherichia coli. J Bacteriol 1980; 144:833-5; PMID:6159347. (Pubitemid 11163316)
-
(1980)
Journal of Bacteriology
, vol.144
, Issue.2
, pp. 833-835
-
-
Ohnishi, Y.1
Akimoto, S.2
-
26
-
-
0025800149
-
The rifampicin-inducible genes srnB from F and pnd from R483 are regulated by antisense RNAs and mediate plasmid maintenance by killing of plasmid-free segregants
-
Nielsen AK, Thorsted P, Thisted T, Wagner EG, Gerdes K. The rifampicin-inducible genes srnB from F and pnd from R483 are regulated by antisense RNAs and mediate plasmid maintenance by killing of plasmid-free segregants. Mol Microbiol 1991; 5:1961-73; PMID:1722558; http://dx.doi. org/10.1111/j.1365-2958.1991.tb00818.x. (Pubitemid 21896226)
-
(1991)
Molecular Microbiology
, vol.5
, Issue.8
, pp. 1961-1973
-
-
Nielsen, A.K.1
Thorsted, P.2
Thisted, T.3
Wagner, E.G.H.4
Gerdes, K.5
-
27
-
-
0025667824
-
The hok killer gene family in gram-negative bacteria
-
PMID:2101633
-
Gerdes K, Poulsen LK, Thisted T, Nielsen AK, Martinussen J, Andreasen PH. The hok killer gene family in gram-negative bacteria. New Biol 1990; 2:946-56; PMID:2101633.
-
(1990)
New Biol
, vol.2
, pp. 946-956
-
-
Gerdes, K.1
Poulsen, L.K.2
Thisted, T.3
Nielsen, A.K.4
Martinussen, J.5
Andreasen, P.H.6
-
28
-
-
0022764432
-
Mechanism of postseg-regational killing by the hok gene product of the parB system of plasmid R1 and its homology with the relF gene product of the E. coli relB operon
-
PMID:3019679
-
Gerdes K, Bech FW, Jørgensen S T, Løbner-Olesen A, Rasmussen PB, Atlung T, et al. Mechanism of postseg-regational killing by the hok gene product of the parB system of plasmid R1 and its homology with the relF gene product of the E. coli relB operon. EMBO J 1986; 5:2023-9; PMID:3019679.
-
(1986)
EMBO J
, vol.5
, pp. 2023-2029
-
-
Gerdes, K.1
Bech, F.W.2
Jørgensen, S.T.3
Løbner-Olesen, A.4
Rasmussen, P.B.5
Atlung, T.6
-
30
-
-
0023901767
-
Nucleotide sequence and transcriptional analysis of a third function (Flm) involved in F-plasmid maintenance
-
PMID:3049248
-
Loh SM, Cram DS, Skurray RA. Nucleotide sequence and transcriptional analysis of a third function (Flm) involved in F-plasmid maintenance. Gene 1988; 66:259-68; PMID:3049248; http://dx.doi. org/10.1016/0378-1119(88)90362-9.
-
(1988)
Gene
, vol.66
, pp. 259-268
-
-
Loh, S.M.1
Cram, D.S.2
Skurray, R.A.3
-
31
-
-
0026571483
-
Mechanism of post-segregational killing by the hok/sok system of plasmid R1. Sok antisense RNA regulates hok gene expression indirectly through the overlapping mok gene
-
PMID:1370544
-
Thisted T, Gerdes K. Mechanism of post-segregational killing by the hok/sok system of plasmid R1. Sok antisense RNA regulates hok gene expression indirectly through the overlapping mok gene. J Mol Biol 1992; 223:41-54; PMID:1370544; http://dx.doi. org/10.1016/0022-2836(92)90714-U.
-
(1992)
J Mol Biol
, vol.223
, pp. 41-54
-
-
Thisted, T.1
Gerdes, K.2
-
32
-
-
0023777994
-
Translational control and differential RNA decay are key elements regulating postsegregational expression of the killer protein encoded by the parB locus of plasmid R1
-
PMID:2460630
-
Gerdes K, Helin K, Christensen OW, Løbner-Olesen A. Translational control and differential RNA decay are key elements regulating postsegregational expression of the killer protein encoded by the parB locus of plasmid R1. J Mol Biol 1988; 203:119-29; PMID:2460630; http://dx.doi.org/10.1016/0022-2836(88) 90096-4.
-
(1988)
J Mol Biol
, vol.203
, pp. 119-129
-
-
Gerdes, K.1
Helin, K.2
Christensen, O.W.3
Løbner-Olesen, A.4
-
33
-
-
0025173633
-
Mechanism of post-segregational killing by the hok/sok system of plasmid R1: Sok antisense RNA regulates formation of a hok mRNA species correlated with killing of plasmid-free cells
-
PMID:1707122
-
Gerdes K, Thisted T, Martinussen J. Mechanism of post-segregational killing by the hok/sok system of plasmid R1: sok antisense RNA regulates formation of a hok mRNA species correlated with killing of plasmid-free cells. Mol Microbiol 1990; 4:1807-18; PMID:1707122; http://dx.doi. org/10.1111/j.1365- 2958.1990.tb02029.x.
-
(1990)
Mol Microbiol
, vol.4
, pp. 1807-1818
-
-
Gerdes, K.1
Thisted, T.2
Martinussen, J.3
-
34
-
-
0031576356
-
Programmed cell death by hok/sok of plasmid R1: Processing at the hok mRNA 3'-end triggers structural rearrangements that allow translation and antisense RNA binding
-
DOI 10.1006/jmbi.1997.1294
-
Franch T, Gultyaev A P, Gerdes K. Programmed cell death by hok/sok of plasmid R1: processing at the hok mRNA 3'-end triggers structural rearrangements that allow translation and antisense RNA binding. J Mol Biol 1997; 273:38-51; PMID:9367744; http://dx.doi. org/10.1006/jmbi.1997.1294. (Pubitemid 27460212)
-
(1997)
Journal of Molecular Biology
, vol.273
, Issue.1
, pp. 38-51
-
-
Franch, T.1
Gultyaev, A.P.2
Gerdes, K.3
-
35
-
-
0026571483
-
Mechanism of post-segregational killing by the hok/sok system of plasmid R1. Sok antisense RNA regulates hok gene expression indirectly through the overlapping mok gene
-
PMID:1370544
-
Thisted T, Gerdes K. Mechanism of post-segregational killing by the hok/sok system of plasmid R1. Sok antisense RNA regulates hok gene expression indirectly through the overlapping mok gene. J Mol Biol 1992; 223:41-54; PMID:1370544; http://dx.doi. org/10.1016/0022-2836(92)90714-U.
-
(1992)
J Mol Biol
, vol.223
, pp. 41-54
-
-
Thisted, T.1
Gerdes, K.2
-
36
-
-
0026746407
-
Mechanism of killer gene activation. Antisense RNA-dependent RNase III cleavage ensures rapid turn-over of the stable hok, srnB and pndA effector messenger RNAs
-
PMID:1380562
-
Gerdes K, Nielsen A, Thorsted P, Wagner EG. Mechanism of killer gene activation. Antisense RNA-dependent RNase III cleavage ensures rapid turn-over of the stable hok, srnB and pndA effector messenger RNAs. J Mol Biol 1992; 226:637-49; PMID:1380562; http://dx.doi.org/10.1016/0022-2836(92)90621-P.
-
(1992)
J Mol Biol
, vol.226
, pp. 637-649
-
-
Gerdes, K.1
Nielsen, A.2
Thorsted, P.3
Wagner, E.G.4
-
37
-
-
0028346279
-
Mechanism of post-segregational killing: Translation of Hok, SrnB and Pnd mRNAs of plasmids R1, F and R483 is activated by 3'-end processing
-
PMID:8168492
-
Thisted T, Nielsen AK, Gerdes K. Mechanism of post-segregational killing: translation of Hok, SrnB and Pnd mRNAs of plasmids R1, F and R483 is activated by 3'-end processing. EMBO J 1994; 13:1950-9; PMID:8168492.
-
(1994)
EMBO J
, vol.13
, pp. 1950-1959
-
-
Thisted, T.1
Nielsen, A.K.2
Gerdes, K.3
-
38
-
-
0028923019
-
Surprises at the 3' end of prokaryotic RNA
-
PMID:7535193
-
Cohen SN. Surprises at the 3' end of prokaryotic RNA. Cell 1995; 80:829-32; PMID:7535193; http://dx.doi. org/10.1016/0092-8674(95)90284-8.
-
(1995)
Cell
, vol.80
, pp. 829-832
-
-
Cohen, S.N.1
-
39
-
-
0003395950
-
Polynucleotide phosphorylase and ribonuclease II are required for cell viability and mRNA turnover in Escherichia coli K-12
-
Donovan W P, Kushner SR. Polynucleotide phosphor-ylase and ribonuclease II are required for cell viability and mRNA turnover in Escherichia coli K-12. Proc Natl Acad Sci USA 1986; 83:120-4; PMID:2417233; http://dx.doi.org/10.1073/ pnas.83.1.120. (Pubitemid 16141625)
-
(1986)
Proceedings of the National Academy of Sciences of the United States of America
, vol.83
, Issue.1
, pp. 120-124
-
-
Donovan, W.P.1
Kushner, S.R.2
-
40
-
-
0025740223
-
mRNA degradation by processive 3′-5′ exoribonucleases in vitro and the implications for prokaryotic mRNA decay in vivo
-
McLaren RS, Newbury S F, Dance GS, Causton HC, Higgins C F. mRNA degradation by processive 3'-5' exoribonucleases in vitro and the implications for prokaryotic mRNA decay in vivo. J Mol Biol 1991; 221:81-95; PMID:1920421. (Pubitemid 121003560)
-
(1991)
Journal of Molecular Biology
, vol.221
, Issue.1
, pp. 81-95
-
-
McLaren, R.S.1
Newbury, S.F.2
Dance, G.S.C.3
Causton, H.C.4
Higgins, C.F.5
-
41
-
-
14244257879
-
Detection of 5′- and 3′-UTR-derived small RNAs and cis-encoded antisense RNAs in Escherichia coli
-
DOI 10.1093/nar/gki256
-
Kawano M, Reynolds AA, Miranda-Rios J, Storz G. Detection of 5'-and 3'-UTR-derived small RNAs and cis-encoded antisense RNAs in Escherichia coli. Nucleic Acids Res 2005; 33:1040-50; PMID:15718303; http://dx.doi.org/10.1093/ nar/gki256. (Pubitemid 41430524)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.3
, pp. 1040-1050
-
-
Kawano, M.1
Reynolds, A.A.2
Miranda-Rios, J.3
Storz, G.4
-
42
-
-
0030606599
-
A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map (supplement)
-
PMID:8905239
-
Oshima T, Aiba H, Baba T, Fujita K, Hayashi K, Honjo A, et al. A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map (supplement). DNA Res 1996; 3:211-23; PMID:8905239; http://dx.doi. org/10.1093/dnares/3.3.211.
-
(1996)
DNA Res
, vol.3
, pp. 211-223
-
-
Oshima, T.1
Aiba, H.2
Baba, T.3
Fujita, K.4
Hayashi, K.5
Honjo, A.6
-
43
-
-
0034607545
-
Color-coding reveals tandem repeats in the Escherichia coli genome
-
PMID:10772854
-
Yoshida T, Obata N, Oosawa K. Color-coding reveals tandem repeats in the Escherichia coli genome. J Mol Biol 2000; 298:343-9; PMID:10772854; http://dx.doi.org/10.1006/jmbi.2000.3667.
-
(2000)
J Mol Biol
, vol.298
, pp. 343-349
-
-
Yoshida, T.1
Obata, N.2
Oosawa, K.3
-
44
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
DOI 10.1126/science.277.5331.1453
-
rd, Bloch CA, Perna N T, Burland V, Riley M, et al. The complete genome sequence of Escherichia coli K-12. Science 1997; 277:1453-62; PMID:9278503; http://dx.doi. org/10.1126/science.277.5331. 1453. (Pubitemid 27449228)
-
(1997)
Science
, vol.277
, Issue.5331
, pp. 1453-1462
-
-
Blattner, F.R.1
Plunkett III, G.2
Bloch, C.A.3
Perna, N.T.4
Burland, V.5
Riley, M.6
Collado-Vides, J.7
Glasner, J.D.8
Rode, C.K.9
Mayhew, G.F.10
Gregor, J.11
Davis, N.W.12
Kirkpatrick, H.A.13
Goeden, M.A.14
Rose, D.J.15
Mau, B.16
Shao, Y.17
-
45
-
-
0036932524
-
Distribution of repetitive sequences on the leading and lagging strands of the Escherichia coli genome: Comparative study of long direct repeat (LDR) sequences
-
DOI 10.1093/dnares/9.1.1
-
Kawano M, Kanaya S, Oshima T, Masuda Y, Ara T, Mori H. Distribution of repetitive sequences on the leading and lagging strands of the Escherichia coli genome: comparative study of Long Direct Repeat (LDR) sequences. DNA Res 2002; 9:1-10; PMID:11939563; http://dx.doi.org/10.1093/dnares/9.1.1. (Pubitemid 36307047)
-
(2002)
DNA Research
, vol.9
, Issue.1
, pp. 1-10
-
-
Kawano, M.1
Kanaya, S.2
Oshima, T.3
Masuda, Y.4
Ara, T.5
Mori, H.6
-
46
-
-
77951619556
-
Abundance of type i toxin-antitoxin systems in bacteria: Searches for new candidates and discovery of novel families
-
PMID:20156992
-
Fozo EM, Makarova KS, Shabalina SA, Yutin N, Koonin E V, Storz G. Abundance of type I toxin-antitoxin systems in bacteria: searches for new candidates and discovery of novel families. Nucleic Acids Res 2010; 38:3743-59; PMID:20156992; http://dx.doi. org/10.1093/nar/gkq054.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 3743-3759
-
-
Fozo, E.M.1
Makarova, K.S.2
Shabalina, S.A.3
Yutin, N.4
Koonin, E.V.5
Storz, G.6
-
47
-
-
57349189421
-
Small toxic proteins and the antisense RNAs that repress them
-
PMID:19052321
-
Fozo EM, Hemm MR, Storz G. Small toxic proteins and the antisense RNAs that repress them. Microbiol Mol Biol Rev 2008; 72:579-89; PMID:19052321; http://dx.doi.org/10.1128/MMBR.00025-08.
-
(2008)
Microbiol Mol Biol Rev
, vol.72
, pp. 579-589
-
-
Fozo, E.M.1
Hemm, M.R.2
Storz, G.3
-
48
-
-
0022764432
-
Mechanism of postseg-regational killing by the hok gene product of the parB system of plasmid R1 and its homology with the relF gene product of the E. coli relB operon
-
PMID:3019679
-
Gerdes K, Bech F W, Jørgensen S T, Løbner-Olesen A, Rasmussen PB, Atlung T, et al. Mechanism of postseg-regational killing by the hok gene product of the parB system of plasmid R1 and its homology with the relF gene product of the E. coli relB operon. EMBO J 1986; 5:2023-9; PMID:3019679.
-
(1986)
EMBO J
, vol.5
, pp. 2023-2029
-
-
Gerdes, K.1
Bech, F.W.2
Jørgensen, S.T.3
Løbner-Olesen, A.4
Rasmussen, P.B.5
Atlung, T.6
-
49
-
-
78649649439
-
Toxin-antitoxin systems: Why so many, what for?
-
PMID:21041110
-
Van Melderen L. Toxin-antitoxin systems: why so many, what for? Curr Opin Microbiol 2010; 13:781-5; PMID:21041110; http://dx.doi.org/10.1016/j. mib.2010.10.006.
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 781-785
-
-
Van Melderen, L.1
-
50
-
-
0032761905
-
Shaping the genome-restriction-modifi-cation systems as mobile genetic elements
-
PMID:10607611
-
Kobayashi I, Nobusato A, Kobayashi-Takahashi N, Uchiyama I. Shaping the genome-restriction-modifi-cation systems as mobile genetic elements. Curr Opin Genet Dev 1999; 9:649-56; PMID:10607611; http://dx.doi.org/10.1016/S0959- 437X(99)00026-X.
-
(1999)
Curr Opin Genet Dev
, vol.9
, pp. 649-656
-
-
Kobayashi, I.1
Nobusato, A.2
Kobayashi-Takahashi, N.3
Uchiyama, I.4
-
51
-
-
1642475095
-
Pathogenicity islands in bacterial pathogenesis
-
DOI 10.1128/CMR.17.1.14-56.2004
-
Schmidt H, Hensel M. Pathogenicity islands in bacterial pathogenesis. Clin Microbiol Rev 2004; 17:14-56; PMID:14726454; http://dx.doi.org/10.1128/CMR. 17.1.14-56.2004. (Pubitemid 38120928)
-
(2004)
Clinical Microbiology Reviews
, vol.17
, Issue.1
, pp. 14-56
-
-
Schmidt, H.1
Hensel, M.2
-
52
-
-
27944467869
-
Characteristics of Streptococcus mutans strains lacking the MazEF and RelBE toxin-antitoxin modules
-
DOI 10.1016/j.femsle.2005.09.045, PII S0378109705006816
-
Lemos JA, Brown TA Jr., Abranches J, Burne RA. Characteristics of Streptococcus mutans strains lacking the MazEF and RelBE toxin-antitoxin modules. FEMS Microbiol Lett 2005; 253:251-7; PMID:16243456; http://dx.doi.org/10.1016/j.femsle.2005.09.045. (Pubitemid 41674523)
-
(2005)
FEMS Microbiology Letters
, vol.253
, Issue.2
, pp. 251-257
-
-
Lemos, J.A.C.1
Brown Jr., T.A.2
Abranches, J.3
Burne, R.A.4
-
53
-
-
57349189421
-
Small toxic proteins and the antisense RNAs that repress them
-
PMID:19052321
-
Fozo EM, Hemm MR, Storz G. Small toxic proteins and the antisense RNAs that repress them. Microbiol Mol Biol Rev 2008; 72:579-89; PMID:19052321; http://dx.doi.org/10.1128/MMBR.00025-08.
-
(2008)
Microbiol Mol Biol Rev
, vol.72
, pp. 579-589
-
-
Fozo, E.M.1
Hemm, M.R.2
Storz, G.3
-
54
-
-
80053474881
-
Toxins-antitoxins: Diversity, evolution and function
-
PMID:21819231
-
Hayes F, Van Melderent L. Toxins-antitoxins: diversity, evolution and function. Crit Rev Biochem Mol Biol 2011; 46:386-408; PMID:21819231; http://dx.doi.org/10.3109/10409238.2011.600437.
-
(2011)
Crit Rev Biochem Mol Biol
, vol.46
, pp. 386-408
-
-
Hayes, F.1
Van Melderent, L.2
-
55
-
-
9244259110
-
70 proteins in T4-type phages and bacteria that are similar to AsiA, a transcription inhibitor and co-activator of bacteriophage T4
-
DOI 10.1016/j.jmb.2004.10.003, PII S0022283604012847
-
Pineda M, Gregory BD, Szczypinski B, Baxter KR, Hochschild A, Miller ES, et al. A family of anti-sigma70 proteins in T4-type phages and bacteria that are similar to AsiA, a Transcription inhibitor and co-activator of bacteriophage T4. J Mol Biol 2004; 344:1183-97; PMID:15561138; http://dx.doi. org/10.1016/j.jmb.2004.10.003. (Pubitemid 39550472)
-
(2004)
Journal of Molecular Biology
, vol.344
, Issue.5
, pp. 1183-1197
-
-
Pineda, M.1
Gregory, B.D.2
Szczypinski, B.3
Baxter, K.R.4
Hochschild, A.5
Miller, E.S.6
Hinton, D.M.7
-
56
-
-
0029972435
-
Exclusion of T4 phage by the hok/sok killer locus from plasmid R1
-
Pecota DC, Wood TK. Exclusion of T4 phage by the hok/sok killer locus from plasmid R1. J Bacteriol 1996; 178:2044-50; PMID:8606182. (Pubitemid 26110551)
-
(1996)
Journal of Bacteriology
, vol.178
, Issue.7
, pp. 2044-2050
-
-
Pecota, D.C.1
Wood, T.K.2
-
57
-
-
14244266086
-
Toxin-antitoxin loci are highly abundant in free-living but lost from host-associated prokaryotes
-
DOI 10.1093/nar/gki201
-
Pandey D P, Gerdes K. Toxin-antitoxin loci are highly abundant in free-living but lost from host-associated prokaryotes. Nucleic Acids Res 2005; 33:966-76; PMID:15718296; http://dx.doi.org/10.1093/nar/gki201. (Pubitemid 41430517)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.3
, pp. 966-976
-
-
Pandey, D.P.1
Gerdes, K.2
-
58
-
-
34548488930
-
Hypothetical functions of toxin-antitoxin systems
-
DOI 10.1128/JB.00958-07
-
Magnuson RD. Hypothetical functions of toxin-antitoxin systems. J Bacteriol 2007; 189:6089-92; PMID:17616596; http://dx.doi.org/10.1128/JB.00958- 07. (Pubitemid 47378614)
-
(2007)
Journal of Bacteriology
, vol.189
, Issue.17
, pp. 6089-6092
-
-
Magnuson, R.D.1
-
59
-
-
78651266381
-
TADB: A web-based resource for Type 2 toxin-antitoxin loci in bacteria and archaea
-
PMID:20929871
-
Shao Y, Harrison EM, Bi D, Tai C, He X, Ou HY, et al. TADB: a web-based resource for Type 2 toxin-antitoxin loci in bacteria and archaea. Nucleic Acids Res 2011; 39(Database issue):D606-11; PMID:20929871; http://dx.doi.org/10.1093/ nar/gkq908.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.DATABASE ISSUE
-
-
Shao, Y.1
Harrison, E.M.2
Bi, D.3
Tai, C.4
He, X.5
Ou, H.Y.6
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