-
1
-
-
62549125109
-
High-dimensional sparse factor modelling: applications in gene expression genomics
-
10.1198/016214508000000869, 3017385, 21218139
-
Carvalho CM, Chang J, Lucas JE, Nevins JR, Wang Q, West M. High-dimensional sparse factor modelling: applications in gene expression genomics. J Am Stat Assoc 2008, 103(484):1438-1456. 10.1198/016214508000000869, 3017385, 21218139.
-
(2008)
J Am Stat Assoc
, vol.103
, Issue.484
, pp. 1438-1456
-
-
Carvalho, C.M.1
Chang, J.2
Lucas, J.E.3
Nevins, J.R.4
Wang, Q.5
West, M.6
-
3
-
-
78049501828
-
Bayesian inference of the number of factors in gene-expression analysis: application to human virus challenge studies
-
10.1186/1471-2105-11-552, 3098097, 21062443
-
Chen B, Chen M, Paisley J, Zaas A, Woods C, Ginsburg GS, Hero AO, Lucas J, Dunson D, Carin L. Bayesian inference of the number of factors in gene-expression analysis: application to human virus challenge studies. BMC Bioinformatics 2010, 11:552. 10.1186/1471-2105-11-552, 3098097, 21062443.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 552
-
-
Chen, B.1
Chen, M.2
Paisley, J.3
Zaas, A.4
Woods, C.5
Ginsburg, G.S.6
Hero, A.O.7
Lucas, J.8
Dunson, D.9
Carin, L.10
-
4
-
-
0242295767
-
Bayesian Factor regression models in the " Large p, Small n" paradigm
-
Oxford University Press
-
West M. Bayesian Factor regression models in the " Large p, Small n" paradigm. Bayesian Statistics 7 2003, 723-732. Oxford University Press.
-
(2003)
Bayesian Statistics 7
, pp. 723-732
-
-
West, M.1
-
5
-
-
0034800371
-
Principal component analysis for clustering gene expression data
-
10.1093/bioinformatics/17.9.763, 11590094
-
Yeung KY, Ruzzo WL. Principal component analysis for clustering gene expression data. Bioinformatics 2001, 17(9):763-774. 10.1093/bioinformatics/17.9.763, 11590094.
-
(2001)
Bioinformatics
, vol.17
, Issue.9
, pp. 763-774
-
-
Yeung, K.Y.1
Ruzzo, W.L.2
-
6
-
-
16444373735
-
Vertex component analysis: A fast algorithm to unmix hyperspectral data
-
Nascimento JM, Bioucas-Dias JM. Vertex component analysis: A fast algorithm to unmix hyperspectral data. IEEE Trans Geosci Remote Sensing 2005, 43(4):898-910.
-
(2005)
IEEE Trans Geosci Remote Sensing
, vol.43
, Issue.4
, pp. 898-910
-
-
Nascimento, J.M.1
Bioucas-Dias, J.M.2
-
7
-
-
0001093042
-
Algorithms for non-negative matrix factorization
-
Lee DD, Seung HS. Algorithms for non-negative matrix factorization. Proc Neural Info Process Syst 2000, 13:556-562.
-
(2000)
Proc Neural Info Process Syst
, vol.13
, pp. 556-562
-
-
Lee, D.D.1
Seung, H.S.2
-
8
-
-
33845903308
-
Inferential, robust non-negative matrix factorization analysis of microarray data
-
10.1093/bioinformatics/btl550, 17092989
-
Fogel P, Young SS, Hawkins DM, Ledirac N. Inferential, robust non-negative matrix factorization analysis of microarray data. Bioinformatics 2007, 23:44-49. 10.1093/bioinformatics/btl550, 17092989.
-
(2007)
Bioinformatics
, vol.23
, pp. 44-49
-
-
Fogel, P.1
Young, S.S.2
Hawkins, D.M.3
Ledirac, N.4
-
9
-
-
0036203115
-
A mixture model-based approach to the clustering of microarray expression data
-
10.1093/bioinformatics/18.3.413, 11934740
-
McLachlan GJ, Bean RW, Peel D. A mixture model-based approach to the clustering of microarray expression data. Bioinformatics 2002, 18(3):413-422. 10.1093/bioinformatics/18.3.413, 11934740.
-
(2002)
Bioinformatics
, vol.18
, Issue.3
, pp. 413-422
-
-
McLachlan, G.J.1
Bean, R.W.2
Peel, D.3
-
10
-
-
79954535330
-
Mixtures of common t-factor analyzers for clustering high-dimensional microarray data
-
10.1093/bioinformatics/btr112, 21372081
-
Baek J, McLachlan GJ. Mixtures of common t-factor analyzers for clustering high-dimensional microarray data. Bioinformatics 2011, 27:1269-1276. 10.1093/bioinformatics/btr112, 21372081.
-
(2011)
Bioinformatics
, vol.27
, pp. 1269-1276
-
-
Baek, J.1
McLachlan, G.J.2
-
11
-
-
0035999975
-
Application of Bayesian decomposition for analysing microarray data
-
10.1093/bioinformatics/18.4.566, 12016054
-
Moloshok TD, Klevecz RR, Grant JD, Manion FJ, Speier WF, Ochs MF. Application of Bayesian decomposition for analysing microarray data. Bioinformatics 2002, 18:566-575. 10.1093/bioinformatics/18.4.566, 12016054.
-
(2002)
Bioinformatics
, vol.18
, pp. 566-575
-
-
Moloshok, T.D.1
Klevecz, R.R.2
Grant, J.D.3
Manion, F.J.4
Speier, W.F.5
Ochs, M.F.6
-
12
-
-
77958479692
-
CoGAPS: an R/C++ package to identify patterns and biological process activity in transcriptomic data
-
10.1093/bioinformatics/btq503, 3025742, 20810601
-
Fertig EJ, Ding J, Favorov AV, Parmigiani G, Ochs MF. CoGAPS: an R/C++ package to identify patterns and biological process activity in transcriptomic data. Bioinformatics 2010, 26:2792-2793. 10.1093/bioinformatics/btq503, 3025742, 20810601.
-
(2010)
Bioinformatics
, vol.26
, pp. 2792-2793
-
-
Fertig, E.J.1
Ding, J.2
Favorov, A.V.3
Parmigiani, G.4
Ochs, M.F.5
-
13
-
-
70350493345
-
Joint Bayesian endmember extraction and linear unmixing for hyperspectral imagery
-
Dobigeon N, Moussaoui S, Coulon M, Tourneret JY, Hero AO. Joint Bayesian endmember extraction and linear unmixing for hyperspectral imagery. IEEE Trans Signal Process 2009, 57(11):4355-4368.
-
(2009)
IEEE Trans Signal Process
, vol.57
, Issue.11
, pp. 4355-4368
-
-
Dobigeon, N.1
Moussaoui, S.2
Coulon, M.3
Tourneret, J.Y.4
Hero, A.O.5
-
14
-
-
80052320333
-
Temporal dynamics of host molecular responses differentiate symptomatic and asymptomatic influenza A infection
-
Huang Y, Zaas AK, Rao A, Dobigeon N, Woolf PJ, Veldman T, Oien NC, McClain MT, Varkey JB, Nicholson B, Carin L, Kingsmore S, Woods CW, Ginsburg GS, Hero A. Temporal dynamics of host molecular responses differentiate symptomatic and asymptomatic influenza A infection. PLoS Genet 2011, 8(7):e1002234.
-
(2011)
PLoS Genet
, vol.8
, Issue.7
-
-
Huang, Y.1
Zaas, A.K.2
Rao, A.3
Dobigeon, N.4
Woolf, P.J.5
Veldman, T.6
Oien, N.C.7
McClain, M.T.8
Varkey, J.B.9
Nicholson, B.10
Carin, L.11
Kingsmore, S.12
Woods, C.W.13
Ginsburg, G.S.14
Hero, A.15
-
16
-
-
29144442380
-
Multi-way clustering of microarray data using probabilistic sparse matrix factorization
-
10.1093/bioinformatics/bth498, 15333460
-
Dueck D, Morris QD, Frey BJ. Multi-way clustering of microarray data using probabilistic sparse matrix factorization. Bioinformatics 2005, 21:144-151. 10.1093/bioinformatics/bth498, 15333460.
-
(2005)
Bioinformatics
, vol.21
, pp. 144-151
-
-
Dueck, D.1
Morris, Q.D.2
Frey, B.J.3
-
17
-
-
79955159094
-
A very fast algorithm for matrix factorization
-
Nikulin V, Huang TH, Ng SK, Rathnayake S, McLachlan GJ. A very fast algorithm for matrix factorization. Stat Probability Lett 2011, 81(7):773-782.
-
(2011)
Stat Probability Lett
, vol.81
, Issue.7
, pp. 773-782
-
-
Nikulin, V.1
Huang, T.H.2
Ng, S.K.3
Rathnayake, S.4
McLachlan, G.J.5
-
18
-
-
69949148793
-
Gene expression signatures diagnose influenza and other symptomatic respiratory viral infections in humans
-
10.1016/j.chom.2009.07.006, 2852511, 19664979
-
Zaas AK, Chen M, Varkey J, Veldman T, Hero AO, Lucas J, Huang Y, Turner R, Gilbert A, Lambkin-Williams R, Øien NC, Nicholson B, Kingsmore S, Carin L, Woods CW, Ginsburg GS. Gene expression signatures diagnose influenza and other symptomatic respiratory viral infections in humans. Cell Host Microbe 2009, 6(3):207-217. [http://www.ncbi.nlm.nih.gov/pubmed/19664979], 10.1016/j.chom.2009.07.006, 2852511, 19664979.
-
(2009)
Cell Host Microbe
, vol.6
, Issue.3
, pp. 207-217
-
-
Zaas, A.K.1
Chen, M.2
Varkey, J.3
Veldman, T.4
Hero, A.O.5
Lucas, J.6
Huang, Y.7
Turner, R.8
Gilbert, A.9
Lambkin-Williams, R.10
Øien, N.C.11
Nicholson, B.12
Kingsmore, S.13
Carin, L.14
Woods, C.W.15
Ginsburg, G.S.16
-
19
-
-
0033310314
-
N-FINDR: an algorithm for fast autonomous spectral end-member determination in hyperspectral data
-
Winter ME. N-FINDR: an algorithm for fast autonomous spectral end-member determination in hyperspectral data. Imaging Spectrometry V Proc SPIE 3753 1999, 266-275.
-
(1999)
Imaging Spectrometry V Proc SPIE 3753
, pp. 266-275
-
-
Winter, M.E.1
-
21
-
-
77956889087
-
Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
-
Green PJ. Reversible jump Markov chain Monte Carlo computation and Bayesian model determination. Biometrika 1995, 82(4):711-732.
-
(1995)
Biometrika
, vol.82
, Issue.4
, pp. 711-732
-
-
Green, P.J.1
-
22
-
-
84879106244
-
BFRM Software: bayesian factor regression modelling
-
BFRM Software: bayesian factor regression modelling. [http://www.stat.duke.edu/research/software/west/bfrm/download.html].
-
-
-
-
26
-
-
46749145829
-
Semi-supervised linear spectral unmixing using a hierarchical Bayesian model for hyperspectral imagery
-
Dobigeon N, Tourneret JY, Chang CI. Semi-supervised linear spectral unmixing using a hierarchical Bayesian model for hyperspectral imagery. IEEE Trans Signal Process 2008, 56(7):2684-2695.
-
(2008)
IEEE Trans Signal Process
, vol.56
, Issue.7
, pp. 2684-2695
-
-
Dobigeon, N.1
Tourneret, J.Y.2
Chang, C.I.3
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