-
1
-
-
0030667702
-
DNA damage-induced phosphorylation of p53 alleviates inhibition by MDM2
-
Shieh SY, Ikeda M, Taya Y, Prives C (1997) DNA damage-induced phosphorylation of p53 alleviates inhibition by MDM2. Cell 91(3):325-334.
-
(1997)
Cell
, vol.91
, Issue.3
, pp. 325-334
-
-
Shieh, S.Y.1
Ikeda, M.2
Taya, Y.3
Prives, C.4
-
2
-
-
0035339357
-
ATM-dependent phosphorylation of Mdm2 on serine 395: Role in p53 activation by DNA damage
-
Maya R, et al. (2001) ATM-dependent phosphorylation of Mdm2 on serine 395: Role in p53 activation by DNA damage. Genes Dev 15(9):1067-1077.
-
(2001)
Genes Dev
, vol.15
, Issue.9
, pp. 1067-1077
-
-
Maya, R.1
-
3
-
-
4344601100
-
YY1 inhibits the activation of the p53 tumor suppressor in response to genotoxic stress
-
Grönroos E, Terentiev AA, Punga T, Ericsson J (2004) YY1 inhibits the activation of the p53 tumor suppressor in response to genotoxic stress. Proc Natl Acad Sci USA 101(33): 12165-12170.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, Issue.33
, pp. 12165-12170
-
-
Grönroos, E.1
Terentiev, A.A.2
Punga, T.3
Ericsson, J.4
-
4
-
-
84862270480
-
P53 dynamics control cell fate
-
Purvis JE, et al. (2012) p53 dynamics control cell fate. Science 336(6087):1440-1444.
-
(2012)
Science
, vol.336
, Issue.6087
, pp. 1440-1444
-
-
Purvis, J.E.1
-
6
-
-
33646140913
-
P53 stabilization and transactivation by a von Hippel-Lindau protein
-
Roe JS, et al. (2006) p53 stabilization and transactivation by a von Hippel-Lindau protein. Mol Cell 22(3):395-405.
-
(2006)
Mol Cell
, vol.22
, Issue.3
, pp. 395-405
-
-
Roe, J.S.1
-
7
-
-
0028294605
-
WAF1/CIP1 is induced in p53-mediated G1 arrest and apoptosis
-
el-Deiry WS, et al. (1994) WAF1/CIP1 is induced in p53-mediated G1 arrest and apoptosis. Cancer Res 54(5):1169-1174.
-
(1994)
Cancer Res
, vol.54
, Issue.5
, pp. 1169-1174
-
-
El-Deiry, W.S.1
-
8
-
-
0029890017
-
Expression of p53 in normal and gamma-irradiated rat testis suggests a role for p53 in meiotic recombination and repair
-
Sjöblom T, Lähdetie J (1996) Expression of p53 in normal and gamma-irradiated rat testis suggests a role for p53 in meiotic recombination and repair. Oncogene 12(12): 2499-2505.
-
(1996)
Oncogene
, vol.12
, Issue.12
, pp. 2499-2505
-
-
Sjöblom, T.1
Lähdetie, J.2
-
9
-
-
33644927601
-
P53 in recombination and repair
-
Gatz SA, Wiesmüller L (2006) p53 in recombination and repair. Cell Death Differ 13(6): 1003-1016.
-
(2006)
Cell Death Differ
, vol.13
, Issue.6
, pp. 1003-1016
-
-
Gatz, S.A.1
Wiesmüller, L.2
-
10
-
-
0034640281
-
Noxa, a BH3-only member of the Bcl-2 family and candidate mediator of p53-induced apoptosis
-
Oda E, et al. (2000) Noxa, a BH3-only member of the Bcl-2 family and candidate mediator of p53-induced apoptosis. Science 288(5468):1053-1058.
-
(2000)
Science
, vol.288
, Issue.5468
, pp. 1053-1058
-
-
Oda, E.1
-
11
-
-
0037452759
-
PUMA mediates the apoptotic response to p53 in colorectal cancer cells
-
Yu J, Wang Z, Kinzler KW, Vogelstein B, Zhang L (2003) PUMA mediates the apoptotic response to p53 in colorectal cancer cells. Proc Natl Acad Sci USA 100(4): 1931-1936.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.4
, pp. 1931-1936
-
-
Yu, J.1
Wang, Z.2
Kinzler, K.W.3
Vogelstein, B.4
Zhang, L.5
-
12
-
-
0037080980
-
Acute glucose starvation activates the nuclear localization signal of a stress-specific yeast transcription factor
-
Görner W, et al. (2002) Acute glucose starvation activates the nuclear localization signal of a stress-specific yeast transcription factor. EMBO J 21(1-2):135-144.
-
(2002)
EMBO J
, vol.21
, Issue.1-2
, pp. 135-144
-
-
Görner, W.1
-
13
-
-
0034708436
-
The transcriptional response of Saccharomyces cerevisiae to osmotic shock. Hot1p and Msn2p/Msn4p are required for the induction of subsets of high osmolarity glycerol pathway-dependent genes
-
Rep M, Krantz M, Thevelein JM, Hohmann S (2000) The transcriptional response of Saccharomyces cerevisiae to osmotic shock. Hot1p and Msn2p/Msn4p are required for the induction of subsets of high osmolarity glycerol pathway-dependent genes. J Biol Chem 275(12):8290-8300.
-
(2000)
J Biol Chem
, vol.275
, Issue.12
, pp. 8290-8300
-
-
Rep, M.1
Krantz, M.2
Thevelein, J.M.3
Hohmann, S.4
-
14
-
-
52949098296
-
Frequency-modulated nuclear localization bursts coordinate gene regulation
-
Cai L, Dalal CK, Elowitz MB (2008) Frequency-modulated nuclear localization bursts coordinate gene regulation. Nature 455(7212):485-490.
-
(2008)
Nature
, vol.455
, Issue.7212
, pp. 485-490
-
-
Cai, L.1
Dalal, C.K.2
Elowitz, M.B.3
-
15
-
-
0030003064
-
Msn2p, a zinc finger DNA-binding protein, is the transcriptional activator of the multistress response in Saccharomyces cerevisiae
-
Schmitt AP, McEntee K (1996) Msn2p, a zinc finger DNA-binding protein, is the transcriptional activator of the multistress response in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 93(12):5777-5782.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, Issue.12
, pp. 5777-5782
-
-
Schmitt, A.P.1
McEntee, K.2
-
16
-
-
14244256556
-
Genome-wide analysis of the general stress response network in Escherichia coli: SigmaS-dependent genes, promoters, and sigma factor selectivity
-
Weber H, Polen T, Heuveling J, Wendisch VF, Hengge R (2005) Genome-wide analysis of the general stress response network in Escherichia coli: SigmaS-dependent genes, promoters, and sigma factor selectivity. J Bacteriol 187(5):1591-1603.
-
(2005)
J Bacteriol
, vol.187
, Issue.5
, pp. 1591-1603
-
-
Weber, H.1
Polen, T.2
Heuveling, J.3
Wendisch, V.F.4
Hengge, R.5
-
17
-
-
35848954992
-
SigB-dependent general stress response in Bacillus subtilis and related gram-positive bacteria
-
Hecker M, Pané-Farré J, Völker U (2007) SigB-dependent general stress response in Bacillus subtilis and related gram-positive bacteria. Annu Rev Microbiol 61:215-236.
-
(2007)
Annu Rev Microbiol
, vol.61
, pp. 215-236
-
-
Hecker, M.1
Pané-Farré, J.2
Völker, U.3
-
18
-
-
67650376275
-
Adaptive prediction of environmental changes bymicroorganisms
-
Mitchell A, et al. (2009) Adaptive prediction of environmental changes bymicroorganisms. Nature 460(7252):220-224.
-
(2009)
Nature
, vol.460
, Issue.7252
, pp. 220-224
-
-
Mitchell, A.1
-
19
-
-
0026662473
-
Stress proteins and cross-protection by heat shock and salt stress in Bacillus subtilis
-
Völker U, Mach H, Schmid R, Hecker M (1992) Stress proteins and cross-protection by heat shock and salt stress in Bacillus subtilis. J Gen Microbiol 138(10):2125-2135.
-
(1992)
J Gen Microbiol
, vol.138
, Issue.10
, pp. 2125-2135
-
-
Völker, U.1
Mach, H.2
Schmid, R.3
Hecker, M.4
-
20
-
-
0842287245
-
Cross-resistance to antibiotics of Escherichia coli adapted to benzalkonium chloride or exposed to stress-inducers
-
Langsrud S, Sundheim G, Holck AL (2004) Cross-resistance to antibiotics of Escherichia coli adapted to benzalkonium chloride or exposed to stress-inducers. J Appl Microbiol 96(1):201-208.
-
(2004)
J Appl Microbiol
, vol.96
, Issue.1
, pp. 201-208
-
-
Langsrud, S.1
Sundheim, G.2
Holck, A.L.3
-
21
-
-
0036956818
-
Bile stress response in Listeria monocytogenes LO28: Adaptation, cross-protection, and identification of genetic loci involved in bile resistance
-
Begley M, Gahan CG, Hill C (2002) Bile stress response in Listeria monocytogenes LO28: Adaptation, cross-protection, and identification of genetic loci involved in bile resistance. Appl Environ Microbiol 68(12):6005-6012.
-
(2002)
Appl Environ Microbiol
, vol.68
, Issue.12
, pp. 6005-6012
-
-
Begley, M.1
Gahan, C.G.2
Hill, C.3
-
22
-
-
84857710573
-
Defining the structure of the general stress regulon of Bacillus subtilis using targeted microarray analysis and random forest classification
-
Nannapaneni P, et al. (2012) Defining the structure of the general stress regulon of Bacillus subtilis using targeted microarray analysis and random forest classification. Microbiology 158(Pt 3):696-707.
-
(2012)
Microbiology
, vol.158
, Issue.PART 3
, pp. 696-707
-
-
Nannapaneni, P.1
-
23
-
-
80054837496
-
Stochastic pulse regulation in bacterial stress response
-
Locke JC, Young JW, Fontes M, Hernández Jiménez MJ, Elowitz MB (2011) Stochastic pulse regulation in bacterial stress response. Science 334(6054):366-369.
-
(2011)
Science
, vol.334
, Issue.6054
, pp. 366-369
-
-
Locke, J.C.1
Young, J.W.2
Fontes, M.3
Hernández, J.M.J.4
Elowitz, M.B.5
-
24
-
-
0029007416
-
Separate mechanisms activate sigma B of Bacillus subtilis in response to environmental and metabolic stresses
-
Voelker U, et al. (1995) Separate mechanisms activate sigma B of Bacillus subtilis in response to environmental and metabolic stresses. J Bacteriol 177(13):3771-3780.
-
(1995)
J Bacteriol
, vol.177
, Issue.13
, pp. 3771-3780
-
-
Voelker, U.1
-
25
-
-
0027401048
-
Bacillus subtilis sigma B is regulated by a binding protein (RsbW) that blocks its association with core RNA polymerase
-
Benson AK, Haldenwang WG (1993) Bacillus subtilis sigma B is regulated by a binding protein (RsbW) that blocks its association with core RNA polymerase. Proc Natl Acad Sci USA 90(6):2330-2334.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, Issue.6
, pp. 2330-2334
-
-
Benson, A.K.1
Haldenwang, W.G.2
-
26
-
-
0035685281
-
Catalytic function of an alpha/beta hydrolase is required for energy stress activation of the sigma(B) transcription factor in Bacillus subtilis
-
Brody MS, Vijay K, Price CW (2001) Catalytic function of an alpha/beta hydrolase is required for energy stress activation of the sigma(B) transcription factor in Bacillus subtilis. J Bacteriol 183(21):6422-6428.
-
(2001)
J Bacteriol
, vol.183
, Issue.21
, pp. 6422-6428
-
-
Brody, M.S.1
Vijay, K.2
Price, C.W.3
-
27
-
-
79955041203
-
In vivo phosphorylation patterns of key stressosome proteins define a second feedback loop that limits activation of Bacillus subtilis σB
-
Eymann C, et al. (2011) In vivo phosphorylation patterns of key stressosome proteins define a second feedback loop that limits activation of Bacillus subtilis σB. Mol Microbiol 80(3):798-810.
-
(2011)
Mol Microbiol
, vol.80
, Issue.3
, pp. 798-810
-
-
Eymann, C.1
-
28
-
-
53349176566
-
Molecular architecture of the "stressosome, " a signal integration and transduction hub
-
Marles-Wright J, et al. (2008) Molecular architecture of the "stressosome, " a signal integration and transduction hub. Science 322(5898):92-96.
-
(2008)
Science
, vol.322
, Issue.5898
, pp. 92-96
-
-
Marles-Wright, J.1
-
29
-
-
33749021097
-
Blue light activates the sigmaB-dependent stress response of Bacillus subtilis via YtvA
-
Avila-Pérez M, Hellingwerf KJ, Kort R (2006) Blue light activates the sigmaB-dependent stress response of Bacillus subtilis via YtvA. J Bacteriol 188(17):6411-6414.
-
(2006)
J Bacteriol
, vol.188
, Issue.17
, pp. 6411-6414
-
-
Avila-Pérez, M.1
Hellingwerf, K.J.2
Kort, R.3
-
30
-
-
33749014144
-
The blue-light receptor YtvA acts in the environmental stress signaling pathway of Bacillus subtilis
-
Gaidenko TA, Kim TJ, Weigel AL, Brody MS, Price CW (2006) The blue-light receptor YtvA acts in the environmental stress signaling pathway of Bacillus subtilis. J Bacteriol 188(17):6387-6395.
-
(2006)
J Bacteriol
, vol.188
, Issue.17
, pp. 6387-6395
-
-
Gaidenko, T.A.1
Kim, T.J.2
Weigel, A.L.3
Brody, M.S.4
Price, C.W.5
-
31
-
-
84860653367
-
Measuring single-cell gene expression dynamics in bacteria using fluorescence time-lapse microscopy
-
Young JW, et al. (2012) Measuring single-cell gene expression dynamics in bacteria using fluorescence time-lapse microscopy. Nat Protoc 7(1):80-88.
-
(2012)
Nat Protoc
, vol.7
, Issue.1
, pp. 80-88
-
-
Young, J.W.1
-
32
-
-
64749116742
-
Using movies to analyse gene circuit dynamics in single cells
-
Locke JC, Elowitz MB (2009) Using movies to analyse gene circuit dynamics in single cells. Nat Rev Microbiol 7(5):383-392.
-
(2009)
Nat Rev Microbiol
, vol.7
, Issue.5
, pp. 383-392
-
-
Locke, J.C.1
Elowitz, M.B.2
-
33
-
-
77953383994
-
Measurement of single-cell dynamics
-
Spiller DG, Wood CD, Rand DA, White MR (2010) Measurement of single-cell dynamics. Nature 465(7299):736-745.
-
(2010)
Nature
, vol.465
, Issue.7299
, pp. 736-745
-
-
Spiller, D.G.1
Wood, C.D.2
Rand, D.A.3
White, M.R.4
-
34
-
-
0027331361
-
Stress-induced activation of the sigma B transcription factor of Bacillus subtilis
-
Boylan SA, Redfield AR, Brody MS, Price CW (1993) Stress-induced activation of the sigma B transcription factor of Bacillus subtilis. J Bacteriol 175(24):7931-7937.
-
(1993)
J Bacteriol
, vol.175
, Issue.24
, pp. 7931-7937
-
-
Boylan, S.A.1
Redfield, A.R.2
Brody, M.S.3
Price, C.W.4
-
35
-
-
0036138908
-
A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications
-
Nagai T, et al. (2002) A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications. Nat Biotechnol 20(1):87-90.
-
(2002)
Nat Biotechnol
, vol.20
, Issue.1
, pp. 87-90
-
-
Nagai, T.1
-
36
-
-
0028860092
-
The Bacillus subtilis rsbU gene product is necessary for RsbX-dependent regulation of sigma B
-
Voelker U, Dufour A, Haldenwang WG (1995) The Bacillus subtilis rsbU gene product is necessary for RsbX-dependent regulation of sigma B. J Bacteriol 177(1):114-122.
-
(1995)
J Bacteriol
, vol.177
, Issue.1
, pp. 114-122
-
-
Voelker, U.1
Dufour, A.2
Haldenwang, W.G.3
-
37
-
-
79960165588
-
Negative auto-regulation increases the input dynamic-range of the arabinose system of Escherichia coli
-
Madar D, Dekel E, Bren A, Alon U (2011) Negative auto-regulation increases the input dynamic-range of the arabinose system of Escherichia coli. BMC Syst Biol 5:111.
-
(2011)
BMC Syst Biol
, vol.5
, pp. 111
-
-
Madar, D.1
Dekel, E.2
Bren, A.3
Alon, U.4
-
38
-
-
62549083590
-
Negative autoregulation linearizes the dose-response and suppresses the heterogeneity of gene expression
-
Nevozhay D, Adams RM, Murphy KF, Josic K, Balázsi G (2009) Negative autoregulation linearizes the dose-response and suppresses the heterogeneity of gene expression. Proc Natl Acad Sci USA 106(13):5123-5128.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.13
, pp. 5123-5128
-
-
Nevozhay, D.1
Adams, R.M.2
Murphy, K.F.3
Josic, K.4
Balázsi, G.5
-
39
-
-
33846108256
-
Noise in transcription negative feedback loops: Simulation and experimental analysis
-
Dublanche Y, Michalodimitrakis K, Kümmerer N, Foglierini M, Serrano L (2006) Noise in transcription negative feedback loops: Simulation and experimental analysis. Mol Syst Biol 2:41.
-
(2006)
Mol Syst Biol
, vol.2
, pp. 41
-
-
Dublanche, Y.1
Michalodimitrakis, K.2
Kümmerer, N.3
Foglierini, M.4
Serrano, L.5
-
40
-
-
0026748430
-
Activation of Bacillus subtilis transcription factor sigma B by a regulatory pathway responsive to stationary-phase signals
-
Boylan SA, Rutherford A, Thomas SM, Price CW (1992) Activation of Bacillus subtilis transcription factor sigma B by a regulatory pathway responsive to stationary-phase signals. J Bacteriol 174(11):3695-3706.
-
(1992)
J Bacteriol
, vol.174
, Issue.11
, pp. 3695-3706
-
-
Boylan, S.A.1
Rutherford, A.2
Thomas, S.M.3
Price, C.W.4
-
41
-
-
0031871413
-
Osmoregulation of the opuE proline transport gene from Bacillus subtilis: Contributions of the sigma A-and sigma B-dependent stressresponsive promoters
-
Spiegelhalter F, Bremer E (1998) Osmoregulation of the opuE proline transport gene from Bacillus subtilis: Contributions of the sigma A- and sigma B-dependent stressresponsive promoters. Mol Microbiol 29(1):285-296.
-
(1998)
Mol Microbiol
, vol.29
, Issue.1
, pp. 285-296
-
-
Spiegelhalter, F.1
Bremer, E.2
-
42
-
-
0032867398
-
The katX gene of Bacillus subtilis is under dual control of sigmaB and sigmaF
-
Petersohn A, Engelmann S, Setlow P, Hecker M (1999) The katX gene of Bacillus subtilis is under dual control of sigmaB and sigmaF. Mol Gen Genet 262(1): 173-179.
-
(1999)
Mol Gen Genet
, vol.262
, Issue.1
, pp. 173-179
-
-
Petersohn, A.1
Engelmann, S.2
Setlow, P.3
Hecker, M.4
-
43
-
-
0020398978
-
Impulse responses in bacterial chemotaxis
-
Block SM, Segall JE, Berg HC (1982) Impulse responses in bacterial chemotaxis. Cell 31(1):215-226.
-
(1982)
Cell
, vol.31
, Issue.1
, pp. 215-226
-
-
Block, S.M.1
Segall, J.E.2
Berg, H.C.3
-
44
-
-
0033552946
-
Robustness in bacterial chemotaxis
-
Alon U, Surette MG, Barkai N, Leibler S (1999) Robustness in bacterial chemotaxis. Nature 397(6715):168-171.
-
(1999)
Nature
, vol.397
, Issue.6715
, pp. 168-171
-
-
Alon, U.1
Surette, M.G.2
Barkai, N.3
Leibler, S.4
-
45
-
-
71149092283
-
Dynamics and variability of ERK2 response to EGF in individual living cells
-
Cohen-Saidon C, Cohen AA, Sigal A, Liron Y, Alon U (2009) Dynamics and variability of ERK2 response to EGF in individual living cells. Mol Cell 36(5):885-893.
-
(2009)
Mol Cell
, vol.36
, Issue.5
, pp. 885-893
-
-
Cohen-Saidon, C.1
Cohen, A.A.2
Sigal, A.3
Liron, Y.4
Alon, U.5
-
46
-
-
71149092489
-
Evidence that fold-change, and not absolute level, of beta-catenin dictates Wnt signaling
-
Goentoro L, Kirschner MW (2009) Evidence that fold-change, and not absolute level, of beta-catenin dictates Wnt signaling. Mol Cell 36(5):872-884.
-
(2009)
Mol Cell
, vol.36
, Issue.5
, pp. 872-884
-
-
Goentoro, L.1
Kirschner, M.W.2
-
47
-
-
77950643420
-
Expression of, and in vivo stressosome formation by, single members of the RsbR protein family in bacillus subtilis
-
Reeves A, Martinez L, Haldenwang W (2010) Expression of, and in vivo stressosome formation by, single members of the RsbR protein family in Bacillus subtilis. Microbiology 156(Pt 4):990-998.
-
(2010)
Microbiology
, vol.156
, Issue.PART 4
, pp. 990-998
-
-
Reeves, A.1
Martinez, L.2
Haldenwang, W.3
-
48
-
-
0037244432
-
Specialized osmotic stress response systems involve multiple SigB-like sigma factors in Streptomyces coelicolor
-
Viollier PH, et al. (2003) Specialized osmotic stress response systems involve multiple SigB-like sigma factors in Streptomyces coelicolor. Mol Microbiol 47(3):699-714.
-
(2003)
Mol Microbiol
, vol.47
, Issue.3
, pp. 699-714
-
-
Viollier, P.H.1
-
49
-
-
64849104716
-
Pulsatile stimulation determines timing and specificity of NF-kappaB-dependent transcription
-
Ashall L, et al. (2009) Pulsatile stimulation determines timing and specificity of NF-kappaB-dependent transcription. Science 324(5924):242-246.
-
(2009)
Science
, vol.324
, Issue.5924
, pp. 242-246
-
-
Ashall, L.1
-
50
-
-
0001615271
-
Transformation of biochemically deficient strains of Bacillus subtilis by deoxyribonucleate
-
Spizizen J (1958) Transformation of biochemically deficient strains of Bacillus subtilis by deoxyribonucleate. Proc Natl Acad Sci USA 44(10):1072-1078.
-
(1958)
Proc Natl Acad Sci USA
, vol.44
, Issue.10
, pp. 1072-1078
-
-
Spizizen, J.1
-
51
-
-
77958471357
-
Differential expression analysis for sequence count data
-
Anders S, Huber W (2010) Differential expression analysis for sequence count data. Genome Biol 11(10):R106.
-
(2010)
Genome Biol
, vol.11
, Issue.10
-
-
Anders, S.1
Huber, W.2
|