-
1
-
-
0029989855
-
FtsH (HflB) is an ATP-dependent protease selectively acting on SecY and some other membrane proteins
-
Akiyama, Y., Kihara, A., Tokuda, H., and Ito, K. 1996. FtsH (HflB) is an ATP-dependent protease selectively acting on SecY and some other membrane proteins. J. Biol. Chem. 271:31196-32201.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 31196-32201
-
-
Akiyama, Y.1
Kihara, A.2
Tokuda, H.3
Ito, K.4
-
2
-
-
38949185102
-
Peptide-assisted degradation of the Salmonella MgtC virulence factor
-
Alix, E., and Blanc-Potard, A. B. 2008. Peptide-assisted degradation of the Salmonella MgtC virulence factor. EMBO (Eur. Mol. Biol. Organ.) J. 27:546-557.
-
(2008)
EMBO (Eur. Mol. Biol. Organ.) J.
, vol.27
, pp. 546-557
-
-
Alix, E.1
Blanc-Potard, A.B.2
-
3
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D. J. 1997. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
4
-
-
42149140023
-
Heterogeneic dynamics of the structures of multiple gene clusters in two pathogenetically different lines originating from the same phytoplasma
-
Arashida, R., Kakizawa, S., Hoshi, A., Ishii, Y., Jung, H. Y., Kagiwada, S., Yamaji, Y., Oshima, K., and Namba, S. 2008. Heterogeneic dynamics of the structures of multiple gene clusters in two pathogenetically different lines originating from the same phytoplasma. DNA Cell Biol. 27:209-217.
-
(2008)
DNA Cell Biol.
, vol.27
, pp. 209-217
-
-
Arashida, R.1
Kakizawa, S.2
Hoshi, A.3
Ishii, Y.4
Jung, H.Y.5
Kagiwada, S.6
Yamaji, Y.7
Oshima, K.8
Namba, S.9
-
5
-
-
33644847226
-
Living with genome instability: The adaptation of phytoplasmas to diverse environments of their insect and plant hosts
-
Bai, X., Zhang, J. H., Ewing, A., Miller, S. A., Radek, A. J., Shevchenko, D. V., Tsukerman, K., Walunas, T., Lapidus, A., Campbell, J. W., and Hogenhout, S. A. 2006. Living with genome instability: The adaptation of phytoplasmas to diverse environments of their insect and plant hosts. J. Bacteriol. 188:3682-3696.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 3682-3696
-
-
Bai, X.1
Zhang, J.H.2
Ewing, A.3
Miller, S.A.4
Radek, A.J.5
Shevchenko, D.V.6
Tsukerman, K.7
Walunas, T.8
Lapidus, A.9
Campbell, J.W.10
Hogenhout, S.A.11
-
6
-
-
0002951334
-
Relation of pear decline to rootstocks and sieve-tube necrosis
-
Batjer, L. P., and Schneider, H. 1960. Relation of pear decline to rootstocks and sieve-tube necrosis. Proc. Am. Soc. Hortic. Sci. 76:85-97.
-
(1960)
Proc. Am. Soc. Hortic. Sci.
, vol.76
, pp. 85-97
-
-
Batjer, L.P.1
Schneider, H.2
-
7
-
-
58149193411
-
Behavior of pear decline disease on different stock-scion combinations
-
Blodgett, E. C., Schneider, H., and Aichele, M. D. 1962. Behavior of pear decline disease on different stock-scion combinations. Phytopathology 52:679-684.
-
(1962)
Phytopathology
, vol.52
, pp. 679-684
-
-
Blodgett, E.C.1
Schneider, H.2
Aichele, M.D.3
-
8
-
-
0000548654
-
Histopathology of phloem necrosis in Ulmus americana
-
Braun, E. J., and Sinclair, W. A. 1976. Histopathology of phloem necrosis in Ulmus americana. Phytopathology 66:598-607.
-
(1976)
Phytopathology
, vol.66
, pp. 598-607
-
-
Braun, E.J.1
Sinclair, W.A.2
-
9
-
-
0000270410
-
Translocation in phloem necrosisdiseased American elm seedlings
-
Braun, E. J., and Sinclair, W. A. 1978. Translocation in phloem necrosisdiseased American elm seedlings. Phytopathology 68:1733-1737.
-
(1978)
Phytopathology
, vol.68
, pp. 1733-1737
-
-
Braun, E.J.1
Sinclair, W.A.2
-
10
-
-
0002352734
-
Transmission of the possible agent of apple proliferation to Vi n c a r o s e a by dodder
-
Carraro, L., Osler, R., Refatti E., and Poggi Pollini, C. 1988. Transmission of the possible agent of apple proliferation to Vi n c a r o s e a by dodder. Riv. Patol. Veg. Ser. 4 24:43-52.
-
(1988)
Riv. Patol. Veg. Ser. 4
, vol.24
, pp. 43-52
-
-
Carraro, L.1
Osler, R.2
Refatti, E.3
Poggi Pollini, C.4
-
11
-
-
0036720126
-
Membrane protein degradation by FtsH can be initiated from either end
-
Chiba, S., Akiyama, Y., and Ito, K. 2002. Membrane protein degradation by FtsH can be initiated from either end. J. Bacteriol. 184:4775-4782.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 4775-4782
-
-
Chiba, S.1
Akiyama, Y.2
Ito, K.3
-
12
-
-
0035986857
-
Ratios of radical to conservative amino acid replacement are affected by mutational and compositional factors and may not be indicative of positive Darwinian selection
-
Dagan, T., Talmor, Y., and Graur, D. 2002. Ratios of radical to conservative amino acid replacement are affected by mutational and compositional factors and may not be indicative of positive Darwinian selection. Mol. Biol. Evol. 19:1022-1025.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1022-1025
-
-
Dagan, T.1
Talmor, Y.2
Graur, D.3
-
13
-
-
33745041480
-
Evolutionary relationships and structural mechanisms of AAA+ proteins
-
Erzberger, J. P., and Berger, J. M. 2006. Evolutionary relationships and structural mechanisms of AAA+ proteins. Annu. Rev. Biophys. Biomol. Struct. 35:93-114.
-
(2006)
Annu. Rev. Biophys. Biomol. Struct.
, vol.35
, pp. 93-114
-
-
Erzberger, J.P.1
Berger, J.M.2
-
14
-
-
0036796467
-
CDART: Protein homology by domain architecture
-
Geer, L. Y., Domrachev, M., Lipman, D. J., and Bryant, S. H. 2002. CDART: Protein homology by domain architecture. Genome Res. 12:1619-1623.
-
(2002)
Genome Res.
, vol.12
, pp. 1619-1623
-
-
Geer, L.Y.1
Domrachev, M.2
Lipman, D.J.3
Bryant, S.H.4
-
16
-
-
25844525796
-
Cellular functions, mechanism of action, and regulation of FtsH protease
-
Ito, K., and Akiyama, Y. 2005. Cellular functions, mechanism of action, and regulation of FtsH protease. Annu. Rev. Microbiol. 59:211-231.
-
(2005)
Annu. Rev. Microbiol.
, vol.59
, pp. 211-231
-
-
Ito, K.1
Akiyama, Y.2
-
17
-
-
33646263381
-
Positive selection acting on a surface membrane protein of the plantpathogenic phytoplasmas
-
Kakizawa, S., Oshima, K., Jung, H. Y., Suzuki, S., Nishigawa, H., Arashida, R., Miyata, S., Ugaki, M., Kishino, H., and Namba, S. 2006. Positive selection acting on a surface membrane protein of the plantpathogenic phytoplasmas. J. Bacteriol. 188:3424-3428.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 3424-3428
-
-
Kakizawa, S.1
Oshima, K.2
Jung, H.Y.3
Suzuki, S.4
Nishigawa, H.5
Arashida, R.6
Miyata, S.7
Ugaki, M.8
Kishino, H.9
Namba, S.10
-
18
-
-
2142657817
-
A combined transmembrane topology and signal peptide prediction method
-
Käll, L., Krogh, A., and Sonnhammer, E. L. L. 2004. A combined transmembrane topology and signal peptide prediction method. J. Mol. Biol. 338:1027-1036.
-
(2004)
J. Mol. Biol.
, vol.338
, pp. 1027-1036
-
-
Käll, L.1
Krogh, A.2
Sonnhammer, E.L.L.3
-
19
-
-
34547584314
-
Advantages of combined transmembrane topology and signal peptide prediction-The Phobius web server
-
Käll, L., Krogh, A., and Sonnhammer, E. L. L. 2007. Advantages of combined transmembrane topology and signal peptide prediction-The Phobius web server. Nucleic Acids Res. 35(Suppl. 2):W429-W432.
-
(2007)
Nucleic Acids Res.
, vol.35
, Issue.SUPPL. 2
-
-
Käll, L.1
Krogh, A.2
Sonnhammer, E.L.L.3
-
20
-
-
0035116848
-
Probing the mechanism of AT P hydrolysis and substrate translocation in the AAA protease FtsH by modelling and mutagenesis
-
Karata, K., Verma, C. S., Wilkinson, A. J., and Ogura, T. 2001. Probing the mechanism of AT P hydrolysis and substrate translocation in the AAA protease FtsH by modelling and mutagenesis. Mol. Microbiol. 39:890-903.
-
(2001)
Mol. Microbiol.
, vol.39
, pp. 890-903
-
-
Karata, K.1
Verma, C.S.2
Wilkinson, A.J.3
Ogura, T.4
-
21
-
-
84940174126
-
Histopathology of apple proliferation in Malus taxa and hybrids of different susceptibility
-
Kartte, S., and Seemüller, E. 1991. Histopathology of apple proliferation in Malus taxa and hybrids of different susceptibility. J. Phytopathol. 131:149-160.
-
(1991)
J. Phytopathol.
, vol.131
, pp. 149-160
-
-
Kartte, S.1
Seemüller, E.2
-
22
-
-
47249123775
-
The linear chromosome of the plant-pathogenic mycoplasma 'Candidatus Phytoplasma mali'
-
Kube, M., Schneider, B., Kuhl, H., Dandekar, T., Heitmann, K., Migdoll, A., Reinhardt, R., and Seemüller, E. 2008. The linear chromosome of the plant-pathogenic mycoplasma 'Candidatus Phytoplasma mali'. BMC Genomics 9:306
-
(2008)
BMC Genomics
, vol.9
, pp. 306
-
-
Kube, M.1
Schneider, B.2
Kuhl, H.3
Dandekar, T.4
Heitmann, K.5
Migdoll, A.6
Reinhardt, R.7
Seemüller, E.8
-
23
-
-
84855198122
-
Structure and function of the bacterial AAA protease FtsH
-
Langklotz, S., Baumann, U., and Narberhaus, F. 2012. Structure and function of the bacterial AAA protease FtsH. Biochim. Biophys. Acta 1823:40-48.
-
(2012)
Biochim. Biophys. Acta
, vol.1823
, pp. 40-48
-
-
Langklotz, S.1
Baumann, U.2
Narberhaus, F.3
-
24
-
-
0032818369
-
Effect of phytoplasmal infection on concentration and translocation of carbohydrates and amino acids in periwinkle and tobacco
-
Lepka, P., Stitt, M., Moll, E., and Seemüller, E. 1999. Effect of phytoplasmal infection on concentration and translocation of carbohydrates and amino acids in periwinkle and tobacco. Physiol. Mol. Plant Pathol. 55:59-68.
-
(1999)
Physiol. Mol. Plant Pathol.
, vol.55
, pp. 59-68
-
-
Lepka, P.1
Stitt, M.2
Moll, E.3
Seemüller, E.4
-
25
-
-
1242296225
-
Role of the hprT-ftsH locus in Staphylococcus aureus
-
Lithgow, J. K., Ingham, E., and Foster, S. J. 2004. Role of the hprT-ftsH locus in Staphylococcus aureus. Microbiology 150:373-381.
-
(2004)
Microbiology
, vol.150
, pp. 373-381
-
-
Lithgow, J.K.1
Ingham, E.2
Foster, S.J.3
-
26
-
-
64049093033
-
A framework for evolutionary systems biology
-
Loewe, L. 2009. A framework for evolutionary systems biology. BMC Syst. Biol. 3:27.
-
(2009)
BMC Syst. Biol.
, vol.3
, pp. 27
-
-
Loewe, L.1
-
27
-
-
84981014564
-
Untersuchungen zur Übertragbarkeit des möglichen Erregers der Triebsucht des Apfels auf einen krautigen Wirt
-
Marwitz, R., Petzold, H., and Özel, M. 1974. Untersuchungen zur Übertragbarkeit des möglichen Erregers der Triebsucht des Apfels auf einen krautigen Wirt. Phytopathol. Z. 81:85-91.
-
(1974)
Phytopathol. Z.
, vol.81
, pp. 85-91
-
-
Marwitz, R.1
Petzold, H.2
Özel, M.3
-
28
-
-
9144247750
-
Reductive evolution suggested from the complete genome sequence of a plant-pathogenic phytoplasma
-
Oshima, K., Kakizawa, S., Nishigawa, H., Jung, H. Y., Wei, W., Suzuki, S., Arashida, R., Nakata, D., Miyata, S., Ugaki, M., and Namba, S. 2004. Reductive evolution suggested from the complete genome sequence of a plant-pathogenic phytoplasma. Nat. Genet. 36:27-29.
-
(2004)
Nat. Genet.
, vol.36
, pp. 27-29
-
-
Oshima, K.1
Kakizawa, S.2
Nishigawa, H.3
Jung, H.Y.4
Wei, W.5
Suzuki, S.6
Arashida, R.7
Nakata, D.8
Miyata, S.9
Ugaki, M.10
Namba, S.11
-
29
-
-
80053345905
-
SignalP 4.0: Discriminating signal peptides from transmembrane regions
-
Petersen, T. N., Brunak, S., Heinje, G., and Nielsen, H. 2011. SignalP 4.0: Discriminating signal peptides from transmembrane regions. Nat. Methods 8:785-786.
-
(2011)
Nat. Methods
, vol.8
, pp. 785-786
-
-
Petersen, T.N.1
Brunak, S.2
Heinje, G.3
Nielsen, H.4
-
30
-
-
0031770391
-
Molecular biology and pathogenicity of mycoplasmas
-
Razin, S., Yogev, D., and Naot, Y. 1998. Molecular biology and pathogenicity of mycoplasmas. Microbiol. Mol. Biol. Rev. 62:1094-1156.
-
(1998)
Microbiol. Mol. Biol. Rev.
, vol.62
, pp. 1094-1156
-
-
Razin, S.1
Yogev, D.2
Naot, Y.3
-
31
-
-
0034938908
-
Characterization and detection of several filamentous viruses of cherry: Adaptation of an alternative cloning method (DOP-PCR), and modification of an RNA extraction protocol
-
Rott, M. E., and Jelkmann, W. 2001. Characterization and detection of several filamentous viruses of cherry: Adaptation of an alternative cloning method (DOP-PCR), and modification of an RNA extraction protocol. Eur. J. Plant Pathol. 107:411-420.
-
(2001)
Eur. J. Plant Pathol.
, vol.107
, pp. 411-420
-
-
Rott, M.E.1
Jelkmann, W.2
-
32
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
S. Krawetz and S. Misener, eds. Humana Press, Totowa, NJ, U. S. A.
-
Rozen, S., and Skaletsky, H. J. 2000. Primer3 on the WWW for general users and for biologist programmers. Pages 365-386 in: Bioinformatics Methods and Protocols: Methods in Molecular Biology. S. Krawetz and S. Misener, eds. Humana Press, Totowa, NJ, U. S. A.
-
(2000)
Bioinformatics Methods and Protocols: Methods in Molecular Biology
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.J.2
-
33
-
-
68849122445
-
Strain differentiation of Candidatus Phytoplasma mali by SSCP and sequence analyses of the hflB gene
-
Schneider, B., and Seemüller, E. 2009. Strain differentiation of Candidatus Phytoplasma mali by SSCP and sequence analyses of the hflB gene. J. Plant Pathol. 91:103-112.
-
(2009)
J. Plant Pathol.
, vol.91
, pp. 103-112
-
-
Schneider, B.1
Seemüller, E.2
-
34
-
-
34547782387
-
Differences in virulence and genomic features of strains of 'Candidatus Phytoplasma mali', the apple proliferation agent
-
Seemüller, E., and Schneider, B. 2007. Differences in virulence and genomic features of strains of 'Candidatus Phytoplasma mali', the apple proliferation agent. Phytopathology 97:964-970.
-
(2007)
Phytopathology
, vol.97
, pp. 964-970
-
-
Seemüller, E.1
Schneider, B.2
-
35
-
-
0141589465
-
Mycoplasmas of plants and insects
-
S. Razin and R. Herrmann, eds. Kluwer Academic/Plenum Publishers, London
-
Seemüller, E., Garnier, M., and Schneider, B. 2002. Mycoplasmas of plants and insects. Pages 91-116 in: Molecular Biology and Pathology of Mycoplasmas. S. Razin and R. Herrmann, eds. Kluwer Academic/Plenum Publishers, London.
-
(2002)
Molecular Biology and Pathology of Mycoplasmas
, pp. 91-116
-
-
Seemüller, E.1
Garnier, M.2
Schneider, B.3
-
36
-
-
77956760264
-
Multiple infection of apple trees by distinct strains of 'Candidatus Phytoplasma mali' and its pathological relevance
-
Seemüller, E., Kiss, E., Sule, S., and Schneider, B. 2010. Multiple infection of apple trees by distinct strains of 'Candidatus Phytoplasma mali' and its pathological relevance. Phytopathology 100:863-870.
-
(2010)
Phytopathology
, vol.100
, pp. 863-870
-
-
Seemüller, E.1
Kiss, E.2
Sule, S.3
Schneider, B.4
-
37
-
-
80052633330
-
HfIB genebased phytopathogenic classification of 'Candidatus Phytoplasma mali' strains and evidence that strain composition determines virulence in multiply infected apple trees
-
Seemüller, E., Kampmann, M. Kiss, E., and Schneider, B. 2011. HfIB genebased phytopathogenic classification of 'Candidatus Phytoplasma mali' strains and evidence that strain composition determines virulence in multiply infected apple trees. Mol. Plant-Microbe Interact. 24:1258-1266.
-
(2011)
Mol. Plant-Microbe Interact.
, vol.24
, pp. 1258-1266
-
-
Seemüller, E.1
Kampmann, M.2
Kiss, E.3
Schneider, B.4
-
38
-
-
0000841603
-
Occurrence of mycoplasma-like organisms in parenchyma cells of Cuscuta odorata (Ruiz et Pav.)
-
Siller, W., Kuhbandner, B., Marwitz, R., Petzold, H., and Seemüller, E. 1987. Occurrence of mycoplasma-like organisms in parenchyma cells of Cuscuta odorata (Ruiz et Pav.). J. Phytopathol. 119:147-159.
-
(1987)
J. Phytopathol.
, vol.119
, pp. 147-159
-
-
Siller, W.1
Kuhbandner, B.2
Marwitz, R.3
Petzold, H.4
Seemüller, E.5
-
39
-
-
65149084160
-
The AAA+ superfamily of functionally diverse proteins
-
Snider, J., Thibault, G., and Houry, W. A. 2008. The AAA+ superfamily of functionally diverse proteins. Genome Biol. 9:216.
-
(2008)
Genome Biol.
, vol.9
, pp. 216
-
-
Snider, J.1
Thibault, G.2
Houry, W.A.3
-
40
-
-
34547781750
-
MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
-
Tamura, K., Dudley, J., Nei, M., and Kumar, S. 2007. MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599.
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
41
-
-
0031574072
-
The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., Gibson, T. J. Plewniak, F., Jeanmougin, F., and Higgins, D. G. 1997. The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24:4876-4882.
-
(1997)
Nucleic Acids Res.
, vol.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
42
-
-
44349099865
-
Comparative genome analysis of 'Candidatus Phytoplasma australiense' (subgroup tuf-Australia I; rp-A) and 'Ca. Phytoplasma asteris' strains OY-M and AY-WB
-
Tran-Nguyen, L. T. T., Kube, M., Schneider, B., Reinhardt, R., and Gibb, K. S. 2008. Comparative genome analysis of 'Candidatus Phytoplasma australiense' (subgroup tuf-Australia I; rp-A) and 'Ca. Phytoplasma asteris' strains OY-M and AY-WB. J. Bacteriol. 190:3979-3991.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 3979-3991
-
-
Tran-Nguyen, L.T.T.1
Kube, M.2
Schneider, B.3
Reinhardt, R.4
Gibb, K.S.5
-
43
-
-
0033921902
-
Rates of conservative and radical nonsynonymous nucleotide substitutions in mammalian nuclear genes
-
Zhang, J. 2000. Rates of conservative and radical nonsynonymous nucleotide substitutions in mammalian nuclear genes. J. Mol. Evol. 50:56-68.
-
(2000)
J. Mol. Evol.
, vol.50
, pp. 56-68
-
-
Zhang, J.1
|