메뉴 건너뛰기




Volumn 51, Issue 3, 2013, Pages 880-886

Evaluation of a benchtop HIV ultradeep pyrosequencing drug resistance assay in the clinical laboratory

Author keywords

[No Author keywords available]

Indexed keywords

ABACAVIR; DARUNAVIR; DARUNAVIR PLUS RITONAVIR; DIDANOSINE; EFAVIRENZ; EMTRICITABINE; FOSAMPRENAVIR PLUS RITONAVIR; HUMAN IMMUNODEFICIENCY VIRUS PROTEINASE INHIBITOR; INDINAVIR PLUS RITONAVIR; LAMIVUDINE; LOPINAVIR PLUS RITONAVIR; NONNUCLEOSIDE REVERSE TRANSCRIPTASE INHIBITOR; RNA DIRECTED DNA POLYMERASE INHIBITOR; STAVUDINE; TENOFOVIR; ZIDOVUDINE;

EID: 84874069503     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.02652-12     Document Type: Article
Times cited : (33)

References (28)
  • 1
    • 79959338709 scopus 로고    scopus 로고
    • Genotypic resistance testing in routine clinical care
    • Dunn DT, Coughlin K, Cane PA. 2011. Genotypic resistance testing in routine clinical care. Curr. Opin. HIV AIDS 6:251-257.
    • (2011) Curr. Opin. HIV AIDS , vol.6 , pp. 251-257
    • Dunn, D.T.1    Coughlin, K.2    Cane, P.A.3
  • 5
    • 61849160367 scopus 로고    scopus 로고
    • Low-abundance drug-resistance HIV-1 variants: Finding significance in an Era of abundant diagnostic and therapeutic options
    • Shafer RW. 2009. Low-abundance drug-resistance HIV-1 variants: finding significance in an Era of abundant diagnostic and therapeutic options. J. Infect. Dis. 199:610-612.
    • (2009) J. Infect. Dis , vol.199 , pp. 610-612
    • Shafer, R.W.1
  • 7
    • 20844451906 scopus 로고    scopus 로고
    • Emergence of drug-resistant HIV-1 after Intrapartum administration of single-dose nevirapine is substantially underestimated
    • Johnson JA, Li Morris J-FL, Martinon N, Gray G, Mclntyre J, Heneine W. 2005. Emergence of drug-resistant HIV-1 after Intrapartum administration of single-dose nevirapine is substantially underestimated. J. Infect. Dis. 192:16 -23.
    • (2005) J. Infect. Dis , vol.192 , pp. 16-23
    • Johnson, J.A.1    Morris J-Fl, L.2    Martinon, N.3    Gray, G.4    McLntyre, J.5    Heneine, W.6
  • 12
    • 82255181690 scopus 로고    scopus 로고
    • Applications of next-generation sequencing technologies to diagnostic virology
    • Barzon L, Lavezzo E, Militello V, Toppo S, Palu' G. 2011. Applications of next-generation sequencing technologies to diagnostic virology. Int. J., Mol. Sci. 12:7861-7884.
    • (2011) Int. J., Mol. Sci , vol.12 , pp. 7861-7884
    • Barzon, L.1    Lavezzo, E.2    Militello, V.3    Toppo, S.4    Palu, G.5
  • 14
    • 77955402078 scopus 로고    scopus 로고
    • Dynamics of HIV-1 quasispecies during antiviral treatment dissected using ultra-deep pyrosequencing
    • doi:10.1371/journal.pone.0011345
    • Hedskog C, Mild M, Jernberg J, Sherwood E, Bratt G, Leitner T, Lundeberg J, Andersson B, Albert J. 2010. Dynamics of HIV-1 quasispecies during antiviral treatment dissected using ultra-deep pyrosequencing. PLoS One 5:e11345. doi:10.1371/journal.pone.0011345.
    • (2010) PLoS One , vol.5
    • Hedskog, C.1    Mild, M.2    Jernberg, J.3    Sherwood, E.4    Bratt, G.5    Leitner, T.6    Lundeberg, J.7    Andersson, B.8    Albert, J.9
  • 19
    • 84861205409 scopus 로고    scopus 로고
    • K65R in subtype C HIV isolates from patients falling on a first-line regimen including d4T or AZT: Comparison of Sanger and UDP sequence data
    • doi:10.1371/journal.pone.0036549
    • Recordon-Pinson P, Papuchon J, Reigadas S, Deshpande A, Fleury H. 2012. K65R in subtype C HIV isolates from patients falling on a first-line regimen including d4T or AZT: comparison of Sanger and UDP sequence data. PLoS One 7:e36549. doi:10.1371/journal.pone.0036549.
    • (2012) PLoS One , vol.7
    • Recordon-Pinson, P.1    Papuchon, J.2    Reigadas, S.3    Deshpande, A.4    Fleury, H.5
  • 20
    • 80053174701 scopus 로고    scopus 로고
    • Clinical pharmacogenic testing of kras braf and egfr mutations by high resolution melting analysis and ultra-deep pyrosequencing
    • doi:10.1186/1471-2407-11-406
    • Borras E, Juardo I, Hernan I, Jose M, Garmundi MJ, Dias M, Marti I, Mane B, Arcusa A, Agundez AGJ, Blanca M, Carballo M. 2011. Clinical pharmacogenic testing of KRAS, BRAF, and EGFR mutations by high resolution melting analysis and ultra-deep pyrosequencing. BMC Cancer 11:406-415. doi:10.1186/1471-2407-11- 406.
    • (2011) BMC Cancer , vol.11 , pp. 406-415
    • Borras, E.1    Juardo, I.2    Hernan, I.3    Jose, M.4    Garmundi, M.J.5    Dias, M.6    Marti, I.7    Mane, B.8    Arcusa, A.9    Agj, A.10    Blanca, M.11    Carballo, M.12
  • 22
    • 67650682133 scopus 로고    scopus 로고
    • Low-abundance HIV drugresistance viral variants in treatment-experienced persons correlate with historical antiretroviral use
    • doi:10.1371/journal.pone0006079
    • Le T, Chiarella J, Simen BB, Hanczaruk B, Egholm M, Landry ML, Dieckhaus K, Rosen MI, Kozal M. 2009. Low-abundance HIV drugresistance viral variants in treatment-experienced persons correlate with historical antiretroviral use. PLoS One 4:e6079. doi:10.1371/journal.pone .0006079.
    • (2009) PLoS One , vol.4
    • Le Chiarella, T.J.1    Simen, B.B.2    Hanczaruk, B.3    Egholm, M.4    Landry, M.L.5    Dieckhaus, K.6    Rosen, M.I.7    Kozal, M.8
  • 24
    • 69249215358 scopus 로고    scopus 로고
    • Molecular characterization of clinical isolates of human immunodeficiency virus resistant to the protease inhibitor darunavir
    • Saskova KG, Koziseq M, Rezakova P, Brynda J, Yashina T, Kagan RM, Konvalinka J. 2009. Molecular characterization of clinical isolates of human immunodeficiency virus resistant to the protease inhibitor darunavir. J. Virol. 83:8810-8818.
    • (2009) J. Virol , vol.83 , pp. 8810-8818
    • Saskova, K.G.1    Koziseq, M.2    Rezakova, P.3    Brynda, J.4    Yashina, T.5    Kagan, R.M.6    Konvalinka, J.7
  • 26
    • 84857074293 scopus 로고    scopus 로고
    • Virologic failures on initial boosted-PI regimen infrequently posses low-level variants with major PI resistance mutations by ultra-deep sequencing
    • doi: 10.1371/journal.pone.0030118
    • Lataillade M, Chiarella J, Yang R, DeGrosky M, Uy J, Seekins D, Simen B, St John E, Moreno E, Kozal M. 2012. Virologic failures on initial boosted-PI regimen infrequently posses low-level variants with major PI resistance mutations by ultra-deep sequencing. PLoS One 7:e30118. doi: 10.1371/journal. pone.0030118.
    • (2012) PLoS One , vol.7
    • Lataillade, M.1    Chiarella, J.2    Yang, R.3    Degrosky, M.4    Uy, J.5    Seekins, D.6    Simen, B.7    St John, E.8    Moreno, E.9    Kozal, M.10
  • 28
    • 84857691276 scopus 로고    scopus 로고
    • Rapid efficient human mutation detection using a benchtop nextgeneration DNA sequencer
    • Jiang Q, Turner T, Sosa MX, Rakha A, Arnold S, Chakravarti A. 2012. Rapid efficient human mutation detection using a benchtop nextgeneration DNA sequencer. Hum. Mutat. 33:281-289.
    • (2012) Hum. Mutat , vol.33 , pp. 281-289
    • Jiang, Q.1    Turner, T.2    Sosa, M.X.3    Rakha, A.4    Arnold, S.5    Chakravarti, A.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.