-
1
-
-
0028947257
-
Funnels, pathways, and the energy landscape of protein-folding-a synthesis
-
Bryngelson J.D., Onuchic J.N., Socci N.D., Wolynes P.G. Funnels, pathways, and the energy landscape of protein-folding-a synthesis. Proteins 1995, 21:167-195.
-
(1995)
Proteins
, vol.21
, pp. 167-195
-
-
Bryngelson, J.D.1
Onuchic, J.N.2
Socci, N.D.3
Wolynes, P.G.4
-
3
-
-
0023449962
-
Spin-glasses and the statistical-mechanics of protein folding
-
Bryngelson J.D., Wolynes P.G. Spin-glasses and the statistical-mechanics of protein folding. Proc Natl Acad Sci U S A 1987, 84:7524-7528.
-
(1987)
Proc Natl Acad Sci U S A
, vol.84
, pp. 7524-7528
-
-
Bryngelson, J.D.1
Wolynes, P.G.2
-
4
-
-
63449129633
-
Insights from coarse-grained go models for protein folding and dynamics
-
Hills R.D., Brooks C.L. Insights from coarse-grained go models for protein folding and dynamics. Int J Mol Sci 2009, 10:889-905.
-
(2009)
Int J Mol Sci
, vol.10
, pp. 889-905
-
-
Hills, R.D.1
Brooks, C.L.2
-
5
-
-
42449102160
-
Probing invisible, low-populated states of protein molecules by relaxation dispersion NMR spectroscopy: an application to protein folding
-
Korzhnev D.M., Kay L.E. Probing invisible, low-populated states of protein molecules by relaxation dispersion NMR spectroscopy: an application to protein folding. Acc Chem Res 2008, 41:442-451.
-
(2008)
Acc Chem Res
, vol.41
, pp. 442-451
-
-
Korzhnev, D.M.1
Kay, L.E.2
-
6
-
-
66149191304
-
Use of protein engineering techniques to elucidate protein folding pathways
-
Mallam A.L., Jackson S.E. Use of protein engineering techniques to elucidate protein folding pathways. Molecular Biology of Protein Folding 2008, vol 84:57.
-
(2008)
Molecular Biology of Protein Folding
, vol.84
, pp. 57
-
-
Mallam, A.L.1
Jackson, S.E.2
-
7
-
-
84862839278
-
Single molecule force spectroscopy using polyproteins
-
Hoffmann T., Dougan L. Single molecule force spectroscopy using polyproteins. Chem Soc Rev 2012, 41:4781-4796.
-
(2012)
Chem Soc Rev
, vol.41
, pp. 4781-4796
-
-
Hoffmann, T.1
Dougan, L.2
-
9
-
-
79551684199
-
The folding of single domain proteins-have we reached a consensus?
-
Sosnick T.R., Barrick D. The folding of single domain proteins-have we reached a consensus?. Curr Opin Struct Biol 2011, 21:12-24.
-
(2011)
Curr Opin Struct Biol
, vol.21
, pp. 12-24
-
-
Sosnick, T.R.1
Barrick, D.2
-
10
-
-
0001261542
-
A single-sweep, nanosecond time resolution laser temperature-jump apparatus
-
Ballew R.M., Sabelko J., Reiner C., Gruebele M. A single-sweep, nanosecond time resolution laser temperature-jump apparatus. Rev Sci Instrum 1996, 67:3694-3699.
-
(1996)
Rev Sci Instrum
, vol.67
, pp. 3694-3699
-
-
Ballew, R.M.1
Sabelko, J.2
Reiner, C.3
Gruebele, M.4
-
11
-
-
12644293454
-
Ultrafast laser induced temperature jump experiments on proteins
-
Phillips C.M., Hochstrasser R.M. Ultrafast laser induced temperature jump experiments on proteins. Biophys J 1996, 70:MP136.
-
(1996)
Biophys J
, vol.70
-
-
Phillips, C.M.1
Hochstrasser, R.M.2
-
12
-
-
0030046906
-
Fast events in protein folding: helix melting and formation in a small peptide
-
Williams S., Causgrove T.P., Gilmanshin R., Fang K.S., Callender R.H., Woodruff W.H., Dyer R.B. Fast events in protein folding: helix melting and formation in a small peptide. Biochemistry 1996, 35:691-697.
-
(1996)
Biochemistry
, vol.35
, pp. 691-697
-
-
Williams, S.1
Causgrove, T.P.2
Gilmanshin, R.3
Fang, K.S.4
Callender, R.H.5
Woodruff, W.H.6
Dyer, R.B.7
-
13
-
-
70449693698
-
Laser temperature jump studies of the helix-coil transition of an alanine-based peptide
-
Thompson P.A., Eaton A., Hofrichter J. Laser temperature jump studies of the helix-coil transition of an alanine-based peptide. Biophys J 1997, 72:WP377.
-
(1997)
Biophys J
, vol.72
-
-
Thompson, P.A.1
Eaton, A.2
Hofrichter, J.3
-
14
-
-
84873526374
-
Fast folding dynamics in peptides initiated by laser-induced temperature jumps
-
Vitols S.E., Chapin C., Callender R.H., Woodruff W.H., Dyer R.B. Fast folding dynamics in peptides initiated by laser-induced temperature jumps. Biophys J 1997, 72:WP369.
-
(1997)
Biophys J
, vol.72
-
-
Vitols, S.E.1
Chapin, C.2
Callender, R.H.3
Woodruff, W.H.4
Dyer, R.B.5
-
15
-
-
0034121798
-
Stepwise formation of alpha-helices during cytochrome c folding
-
Akiyama S., Takahashi S., Ishimori K., Morishima I. Stepwise formation of alpha-helices during cytochrome c folding. Nat Struct Biol 2000, 7:514-520.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 514-520
-
-
Akiyama, S.1
Takahashi, S.2
Ishimori, K.3
Morishima, I.4
-
17
-
-
0041321045
-
Single-molecule measurement of protein folding kinetics
-
Lipman E.A., Schuler B., Bakajin O., Eaton W.A. Single-molecule measurement of protein folding kinetics. Science 2003, 301:1233-1235.
-
(2003)
Science
, vol.301
, pp. 1233-1235
-
-
Lipman, E.A.1
Schuler, B.2
Bakajin, O.3
Eaton, W.A.4
-
18
-
-
10644294906
-
Femtomole mixer for microsecond kinetic studies of protein folding
-
Hertzog D.E., Michalet X., Jager M., Kong X.X., Santiago J.G., Weiss S., Bakajin O. Femtomole mixer for microsecond kinetic studies of protein folding. Anal Chem 2004, 76:7169-7178.
-
(2004)
Anal Chem
, vol.76
, pp. 7169-7178
-
-
Hertzog, D.E.1
Michalet, X.2
Jager, M.3
Kong, X.X.4
Santiago, J.G.5
Weiss, S.6
Bakajin, O.7
-
19
-
-
34547779884
-
Improvements in mixing time and mixing uniformity in devices designed for studies of protein folding kinetics
-
Yao S., Bakajin O. Improvements in mixing time and mixing uniformity in devices designed for studies of protein folding kinetics. Anal Chem 2007, 79:5753-5759.
-
(2007)
Anal Chem
, vol.79
, pp. 5753-5759
-
-
Yao, S.1
Bakajin, O.2
-
20
-
-
58149119845
-
Microfluidic mixers for the investigation of rapid protein folding kinetics using synchrotron radiation circular dichroism spectroscopy
-
Kane A.S., Hoffmann A., Baumgartel P., Seckler R., Reichardt G., Horsley D.A., Schuler B., Bakajin O. Microfluidic mixers for the investigation of rapid protein folding kinetics using synchrotron radiation circular dichroism spectroscopy. Anal Chem 2008, 80:9534-9541.
-
(2008)
Anal Chem
, vol.80
, pp. 9534-9541
-
-
Kane, A.S.1
Hoffmann, A.2
Baumgartel, P.3
Seckler, R.4
Reichardt, G.5
Horsley, D.A.6
Schuler, B.7
Bakajin, O.8
-
21
-
-
33745728441
-
Achieving uniform mixing in a microfluidic device: hydrodynamic focusing prior to mixing
-
Park H.Y., Qiu X.Y., Rhoades E., Korlach J., Kwok L.W., Zipfel W.R., Webb W.W., Pollack L. Achieving uniform mixing in a microfluidic device: hydrodynamic focusing prior to mixing. Anal Chem 2006, 78:4465-4473.
-
(2006)
Anal Chem
, vol.78
, pp. 4465-4473
-
-
Park, H.Y.1
Qiu, X.Y.2
Rhoades, E.3
Korlach, J.4
Kwok, L.W.5
Zipfel, W.R.6
Webb, W.W.7
Pollack, L.8
-
22
-
-
63649116693
-
Design and evaluation of a passive alcove-based microfluidic mixer
-
Egawa T., Durand J.L., Hayden E.Y., Rousseau D.L., Yeh S.R. Design and evaluation of a passive alcove-based microfluidic mixer. Anal Chem 2009, 81:1622-1627.
-
(2009)
Anal Chem
, vol.81
, pp. 1622-1627
-
-
Egawa, T.1
Durand, J.L.2
Hayden, E.Y.3
Rousseau, D.L.4
Yeh, S.R.5
-
23
-
-
84859465192
-
Direct observation of multiple misfolding pathways in a single prion protein molecule
-
Yu H., Liu X., Neupane K., Gupta A.N., Brigley A.M., Solanki A., Sosova I., Woodside M.T. Direct observation of multiple misfolding pathways in a single prion protein molecule. Proc Natl Acad Sci U S A 2012, 109:5283-5288.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 5283-5288
-
-
Yu, H.1
Liu, X.2
Neupane, K.3
Gupta, A.N.4
Brigley, A.M.5
Solanki, A.6
Sosova, I.7
Woodside, M.T.8
-
24
-
-
80055033153
-
Single-molecule fluorescence spectroscopy maps the folding landscape of a large protein
-
Pirchi M., Ziv G., Riven I., Cohen S.S., Zohar N., Barak Y., Haran G. Single-molecule fluorescence spectroscopy maps the folding landscape of a large protein. Nat Commun 2011, 2.
-
(2011)
Nat Commun
, vol.2
-
-
Pirchi, M.1
Ziv, G.2
Riven, I.3
Cohen, S.S.4
Zohar, N.5
Barak, Y.6
Haran, G.7
-
25
-
-
79551533112
-
A photoprotection strategy for microsecond-resolution single-molecule fluorescence spectroscopy
-
Campos L.A., Liu J.W., Wang X., Ramanathan R., English D.S., Munoz V. A photoprotection strategy for microsecond-resolution single-molecule fluorescence spectroscopy. Nat Methods 2011, 8:143-163.
-
(2011)
Nat Methods
, vol.8
, pp. 143-163
-
-
Campos, L.A.1
Liu, J.W.2
Wang, X.3
Ramanathan, R.4
English, D.S.5
Munoz, V.6
-
26
-
-
84862907744
-
Exploring one-state downhill protein folding in single molecules
-
Liu J.W., Campos L.A., Cerminara M., Wang X., Ramanathan R., English D.S., Munoz V. Exploring one-state downhill protein folding in single molecules. Proc Natl Acad Sci U S A 2012, 109:179-184.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 179-184
-
-
Liu, J.W.1
Campos, L.A.2
Cerminara, M.3
Wang, X.4
Ramanathan, R.5
English, D.S.6
Munoz, V.7
-
27
-
-
84859266139
-
Small-angle X-ray scattering and single-molecule fret spectroscopy produce highly divergent views of the low-denaturant unfolded state
-
Yoo T.Y., Meisburger S.P., Hinshaw J., Pollack L., Haran G., Sosnick T.R., Plaxco K. Small-angle X-ray scattering and single-molecule fret spectroscopy produce highly divergent views of the low-denaturant unfolded state. J Mol Biol 2012, 418:226-236.
-
(2012)
J Mol Biol
, vol.418
, pp. 226-236
-
-
Yoo, T.Y.1
Meisburger, S.P.2
Hinshaw, J.3
Pollack, L.4
Haran, G.5
Sosnick, T.R.6
Plaxco, K.7
-
28
-
-
33846839535
-
Characterizing the unfolded states of proteins using single-molecule fret spectroscopy and molecular simulations
-
Merchant K.A., Best R.B., Louis J.M., Gopich I.V., Eaton W.A. Characterizing the unfolded states of proteins using single-molecule fret spectroscopy and molecular simulations. Proc Natl Acad Sci U S A 2007, 104:1528-1533.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 1528-1533
-
-
Merchant, K.A.1
Best, R.B.2
Louis, J.M.3
Gopich, I.V.4
Eaton, W.A.5
-
29
-
-
33746823043
-
Coil-globule transition in the denatured state of a small protein
-
Sherman E., Haran G. Coil-globule transition in the denatured state of a small protein. Proc Natl Acad Sci U S A 2006, 103:11539-11543.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 11539-11543
-
-
Sherman, E.1
Haran, G.2
-
30
-
-
84864495493
-
Slow unfolded-state structuring in acyl-coa binding protein folding revealed by simulation and experiment
-
Voelz V.A., Jäger M., Yao S., Chen Y., Zhu L., Waldauer S.A., Bowman G.R., Friedrichs M., Bakajin O., Lapidus L.J., et al. Slow unfolded-state structuring in acyl-coa binding protein folding revealed by simulation and experiment. J Am Chem Soc 2012, 134:12565-12577.
-
(2012)
J Am Chem Soc
, vol.134
, pp. 12565-12577
-
-
Voelz, V.A.1
Jäger, M.2
Yao, S.3
Chen, Y.4
Zhu, L.5
Waldauer, S.A.6
Bowman, G.R.7
Friedrichs, M.8
Bakajin, O.9
Lapidus, L.J.10
-
31
-
-
70350020368
-
Direct observation of downhill folding of lambda-repressor in a microfluidic mixer
-
DeCamp S.J., Naganathan A.N., Waldauer S.A., Bakajin O., Lapidus L.J. Direct observation of downhill folding of lambda-repressor in a microfluidic mixer. Biophys J 2009, 97:1772-1777.
-
(2009)
Biophys J
, vol.97
, pp. 1772-1777
-
-
DeCamp, S.J.1
Naganathan, A.N.2
Waldauer, S.A.3
Bakajin, O.4
Lapidus, L.J.5
-
32
-
-
58549088131
-
Dynamics of one-state downhill protein folding
-
Li P., Oliva F.Y., Naganathan A.N., Munoz V. Dynamics of one-state downhill protein folding. Proc Natl Acad Sci U S A 2009, 106:103-108.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 103-108
-
-
Li, P.1
Oliva, F.Y.2
Naganathan, A.N.3
Munoz, V.4
-
33
-
-
14044258768
-
Kinetics are probe-dependent during downhill folding of an engineered lambda(6-85) protein
-
Ma H.R., Gruebele M. Kinetics are probe-dependent during downhill folding of an engineered lambda(6-85) protein. Proc Natl Acad Sci U S A 2005, 102:2283-2287.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 2283-2287
-
-
Ma, H.R.1
Gruebele, M.2
-
34
-
-
83755162489
-
Differential ordering of the protein backbone and side chains during protein folding revealed by site-specific recombinant infrared probes
-
Nagarajan S., Taskent-Sezgin H., Parul D., Carrico I., Raleigh D.P., Dyer R.B. Differential ordering of the protein backbone and side chains during protein folding revealed by site-specific recombinant infrared probes. J Am Chem Soc 2011, 133:20335-20340.
-
(2011)
J Am Chem Soc
, vol.133
, pp. 20335-20340
-
-
Nagarajan, S.1
Taskent-Sezgin, H.2
Parul, D.3
Carrico, I.4
Raleigh, D.P.5
Dyer, R.B.6
-
35
-
-
34247880253
-
Protein folding kinetics: barrier effects in chemical and thermal denaturation experiments
-
Naganathan A.N., Doshi U., Munoz V. Protein folding kinetics: barrier effects in chemical and thermal denaturation experiments. J Am Chem Soc 2007, 129:5673-5682.
-
(2007)
J Am Chem Soc
, vol.129
, pp. 5673-5682
-
-
Naganathan, A.N.1
Doshi, U.2
Munoz, V.3
-
36
-
-
34249887411
-
Probe-dependent and nonexponential relaxation kinetics: unreliable signatures of downhill protein folding
-
Hagen S.J. Probe-dependent and nonexponential relaxation kinetics: unreliable signatures of downhill protein folding. Proteins 2007, 68:205-217.
-
(2007)
Proteins
, vol.68
, pp. 205-217
-
-
Hagen, S.J.1
-
37
-
-
60349085890
-
A one-dimensional free energy surface does not account for two-probe folding kinetics of protein alpha d-3
-
Liu F., Dumont C., Zhu Y.J., DeGrado W.F., Gai F., Gruebele M. A one-dimensional free energy surface does not account for two-probe folding kinetics of protein alpha d-3. J Chem Phys 2009, 130.
-
(2009)
J Chem Phys
, vol.130
-
-
Liu, F.1
Dumont, C.2
Zhu, Y.J.3
DeGrado, W.F.4
Gai, F.5
Gruebele, M.6
-
38
-
-
70450235210
-
The transition state transit time of WW domain folding is controlled by energy landscape roughness
-
Liu F., Nakaema M., Gruebele M. The transition state transit time of WW domain folding is controlled by energy landscape roughness. J Chem Phys 2009, 131:195101-195109.
-
(2009)
J Chem Phys
, vol.131
, pp. 195101-195109
-
-
Liu, F.1
Nakaema, M.2
Gruebele, M.3
-
39
-
-
80055025470
-
Evidence of multiple folding pathways for the villin headpiece subdomain
-
Zhu L., Ghosh K., King M., Cellmer T., Bakajin O., Lapidus L.J. Evidence of multiple folding pathways for the villin headpiece subdomain. J Phys Chem B 2011, 115:12632-12637.
-
(2011)
J Phys Chem B
, vol.115
, pp. 12632-12637
-
-
Zhu, L.1
Ghosh, K.2
King, M.3
Cellmer, T.4
Bakajin, O.5
Lapidus, L.J.6
-
40
-
-
0033578370
-
The speed limit for protein folding measured by triplet-triplet energy transfer
-
Bieri O., Wirz J., Hellrung B., Schutkowski M., Drewello M., Kiefhaber T. The speed limit for protein folding measured by triplet-triplet energy transfer. Proc Natl Acad Sci U S A 1999, 96:9597-9601.
-
(1999)
Proc Natl Acad Sci U S A
, vol.96
, pp. 9597-9601
-
-
Bieri, O.1
Wirz, J.2
Hellrung, B.3
Schutkowski, M.4
Drewello, M.5
Kiefhaber, T.6
-
41
-
-
0034691198
-
Measuring the rate of intramolecular contact formation in polypeptides
-
Lapidus L.J., Eaton W.A., Hofrichter J. Measuring the rate of intramolecular contact formation in polypeptides. Proc Natl Acad Sci U S A 2000, 97:7220-7225.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 7220-7225
-
-
Lapidus, L.J.1
Eaton, W.A.2
Hofrichter, J.3
-
42
-
-
0037617492
-
Measurement of submicrosecond intramolecular contact formation in peptides at the single-molecule level
-
Neuweiler H., Schulz A., Bohmer M., Enderlein J., Sauer M. Measurement of submicrosecond intramolecular contact formation in peptides at the single-molecule level. J Am Chem Soc 2003, 125:5324-5330.
-
(2003)
J Am Chem Soc
, vol.125
, pp. 5324-5330
-
-
Neuweiler, H.1
Schulz, A.2
Bohmer, M.3
Enderlein, J.4
Sauer, M.5
-
43
-
-
0037038514
-
Effects of chain stiffness on the dynamics of loop formation in polypeptides. Appendix: testing a 1-dimensional diffusion model for peptide dynamics
-
Lapidus L.J., Steinbach P.J., Eaton W.A., Szabo A., Hofrichter J. Effects of chain stiffness on the dynamics of loop formation in polypeptides. Appendix: testing a 1-dimensional diffusion model for peptide dynamics. J Phys Chem B 2002, 106:11628-11640.
-
(2002)
J Phys Chem B
, vol.106
, pp. 11628-11640
-
-
Lapidus, L.J.1
Steinbach, P.J.2
Eaton, W.A.3
Szabo, A.4
Hofrichter, J.5
-
44
-
-
44949240469
-
Unfolded protein and peptide dynamics investigated with single-molecule fret and correlation spectroscopy from picoseconds to seconds
-
Nettels D., Hoffmann A., Schuler B. Unfolded protein and peptide dynamics investigated with single-molecule fret and correlation spectroscopy from picoseconds to seconds. J Phys Chem B 2008, 112:6137-6146.
-
(2008)
J Phys Chem B
, vol.112
, pp. 6137-6146
-
-
Nettels, D.1
Hoffmann, A.2
Schuler, B.3
-
45
-
-
0043237588
-
Dynamics of unfolded polypeptide chains as model for the earliest steps in protein folding
-
Krieger F., Fierz B., Bieri O., Drewello M., Kiefhaber T. Dynamics of unfolded polypeptide chains as model for the earliest steps in protein folding. J Mol Biol 2003, 332:265-274.
-
(2003)
J Mol Biol
, vol.332
, pp. 265-274
-
-
Krieger, F.1
Fierz, B.2
Bieri, O.3
Drewello, M.4
Kiefhaber, T.5
-
46
-
-
14944346760
-
Effect of proline and glycine residues on dynamics and barriers of loop formation in polypeptide chains
-
Krieger F., Moglich A., Kiefhaber T. Effect of proline and glycine residues on dynamics and barriers of loop formation in polypeptide chains. J Am Chem Soc 2005, 127:3346-3352.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 3346-3352
-
-
Krieger, F.1
Moglich, A.2
Kiefhaber, T.3
-
47
-
-
33747623305
-
End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation
-
Moglich A., Joder K., Kiefhaber T. End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation. Proc Natl Acad Sci U S A 2006, 103:12394-12399.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 12394-12399
-
-
Moglich, A.1
Joder, K.2
Kiefhaber, T.3
-
48
-
-
76749155787
-
Hydrogen-bond driven loop-closure kinetics in unfolded polypeptide chains
-
Daidone I., Neuweiler H., Doose S., Sauer M., Smith J.C. Hydrogen-bond driven loop-closure kinetics in unfolded polypeptide chains. PLoS Comput Biol 2010, 6.
-
(2010)
PLoS Comput Biol
, vol.6
-
-
Daidone, I.1
Neuweiler, H.2
Doose, S.3
Sauer, M.4
Smith, J.C.5
-
49
-
-
78650166403
-
A general polymer model of unfolded proteins under folding conditions
-
Chen Y., Wedemeyer W.J., Lapidus L.J. A general polymer model of unfolded proteins under folding conditions. J Phys Chem B 2010, 114:15969-15975.
-
(2010)
J Phys Chem B
, vol.114
, pp. 15969-15975
-
-
Chen, Y.1
Wedemeyer, W.J.2
Lapidus, L.J.3
-
50
-
-
73449125917
-
Conformational properties of unfolded HypF-N
-
Chen Y.J., Parrini C., Taddei N., Lapidus L.J. Conformational properties of unfolded HypF-N. J Phys Chem B 2009, 113:16209-16213.
-
(2009)
J Phys Chem B
, vol.113
, pp. 16209-16213
-
-
Chen, Y.J.1
Parrini, C.2
Taddei, N.3
Lapidus, L.J.4
-
51
-
-
34548506753
-
Dynamic similarity of the unfolded states of proteins L and G
-
Singh V.R., Kopka M., Chen Y., Wedemeyer W.J., Lapidus L.J. Dynamic similarity of the unfolded states of proteins L and G. Biochemistry 2007, 46:10046-10054.
-
(2007)
Biochemistry
, vol.46
, pp. 10046-10054
-
-
Singh, V.R.1
Kopka, M.2
Chen, Y.3
Wedemeyer, W.J.4
Lapidus, L.J.5
-
52
-
-
84862076708
-
-
Quantifying internal friction in unfolded and intrinsically disordered proteins with single-molecule spectroscopy. Proc Natl Acad Sci U S A 2012, This paper is the second measurement of intramolecular diffusion before folding using a microfluidic mixer and a new coupling of theory and experiment to determine reconfiguration times
-
Soranno A, Buchli B, Nettels D, Cheng RR, Müller-Späth S, Pfeil SH, Hoffmann A, Lipman EA, Makarov DE, Schuler B: Quantifying internal friction in unfolded and intrinsically disordered proteins with single-molecule spectroscopy. Proc Natl Acad Sci U S A 2012, This paper is the second measurement of intramolecular diffusion before folding using a microfluidic mixer and a new coupling of theory and experiment to determine reconfiguration times. doi:10.1073/pnas.1117368109.
-
-
-
Soranno, A.1
Buchli, B.2
Nettels, D.3
Cheng, R.R.4
Müller-Späth, S.5
Pfeil, S.H.6
Hoffmann, A.7
Lipman, E.A.8
Makarov, D.E.9
Schuler, B.10
-
53
-
-
77957092799
-
Charge interactions can dominate the dimensions of intrinsically disordered proteins
-
Muller-Spath S., Soranno A., Hirschfeld V., Hofmann H., Ruegger S., Reymond L., Nettels D., Schuler B. Charge interactions can dominate the dimensions of intrinsically disordered proteins. Proc Natl Acad Sci U S A 2010, 107:14609-14614.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 14609-14614
-
-
Muller-Spath, S.1
Soranno, A.2
Hirschfeld, V.3
Hofmann, H.4
Ruegger, S.5
Reymond, L.6
Nettels, D.7
Schuler, B.8
-
54
-
-
0041735179
-
Kinetics of intramolecular contact formation in a denatured protein
-
Buscaglia M., Schuler B., Lapidus L.J., Eaton W.A., Hofrichter J. Kinetics of intramolecular contact formation in a denatured protein. J Mol Biol 2003, 332:9-12.
-
(2003)
J Mol Biol
, vol.332
, pp. 9-12
-
-
Buscaglia, M.1
Schuler, B.2
Lapidus, L.J.3
Eaton, W.A.4
Hofrichter, J.5
-
55
-
-
79955013716
-
Making connections between ultrafast protein folding kinetics and molecular dynamics simulations
-
Cellmer T., Buscaglia M., Henry E.R., Hofrichter J., Eaton W.A. Making connections between ultrafast protein folding kinetics and molecular dynamics simulations. Proc Natl Acad Sci U S A 2011, 108:6103-6108.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 6103-6108
-
-
Cellmer, T.1
Buscaglia, M.2
Henry, E.R.3
Hofrichter, J.4
Eaton, W.A.5
-
56
-
-
77950388103
-
An unlocking/relocking barrier in conformational fluctuations of villin headpiece subdomain
-
Reiner A., Henklein P., Kiefhaber T. An unlocking/relocking barrier in conformational fluctuations of villin headpiece subdomain. Proc Natl Acad Sci U S A 2010, 107:4955-4960.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 4955-4960
-
-
Reiner, A.1
Henklein, P.2
Kiefhaber, T.3
-
57
-
-
78650639374
-
Kinetics of chain motions within a protein-folding intermediate
-
Neuweiler H., Banachewicz W., Fersht A.R. Kinetics of chain motions within a protein-folding intermediate. Proc Natl Acad Sci U S A 2010, 107:22106-22110.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 22106-22110
-
-
Neuweiler, H.1
Banachewicz, W.2
Fersht, A.R.3
-
58
-
-
77956361829
-
Extremely slow intramolecular diffusion in unfolded protein L
-
Waldauer S.A., Bakajin O., Lapidus L.J. Extremely slow intramolecular diffusion in unfolded protein L. Proc Natl Acad Sci U S A 2010, 107:13713-13717.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 13713-13717
-
-
Waldauer, S.A.1
Bakajin, O.2
Lapidus, L.J.3
-
59
-
-
0001510938
-
Minimum energy compact structures of random sequences of heteropolymers
-
Camacho C.J., Thirumalai D. Minimum energy compact structures of random sequences of heteropolymers. Phys Rev Lett 1993, 71:2505-2508.
-
(1993)
Phys Rev Lett
, vol.71
, pp. 2505-2508
-
-
Camacho, C.J.1
Thirumalai, D.2
-
60
-
-
0030443105
-
Factors governing the foldability of proteins
-
Klimov D.K., Thirumalai D. Factors governing the foldability of proteins. Proteins 1996, 26:411-441.
-
(1996)
Proteins
, vol.26
, pp. 411-441
-
-
Klimov, D.K.1
Thirumalai, D.2
-
61
-
-
84857510185
-
Single-molecule fluorescence experiments determine protein folding transition path times
-
Chung H.S., McHale K., Louis J.M., Eaton W.A. Single-molecule fluorescence experiments determine protein folding transition path times. Science 2012, 335:981-984.
-
(2012)
Science
, vol.335
, pp. 981-984
-
-
Chung, H.S.1
McHale, K.2
Louis, J.M.3
Eaton, W.A.4
-
62
-
-
78149330136
-
Simple theory of protein folding kinetics
-
Pande V.S. Simple theory of protein folding kinetics. Phys Rev Lett 2010, 105.
-
(2010)
Phys Rev Lett
, vol.105
-
-
Pande, V.S.1
|