-
1
-
-
0032837860
-
Mouse ENU mutagenesis
-
Justice MJ, Noveroske JK, Weber JS, Zheng B, Bradley A, (1999) Mouse ENU mutagenesis. Hum Mol Genet 8: 1955-1963.
-
(1999)
Hum Mol Genet
, vol.8
, pp. 1955-1963
-
-
Justice, M.J.1
Noveroske, J.K.2
Weber, J.S.3
Zheng, B.4
Bradley, A.5
-
2
-
-
52949150758
-
ENU mutagenesis, a way forward to understand gene function
-
Acevedo-Arozena A, Wells S, Potter P, Kelly M, Cox RD, et al. (2008) ENU mutagenesis, a way forward to understand gene function. Annual review of genomics and human genetics 9: 49-69.
-
(2008)
Annual Review of Genomics and Human Genetics
, vol.9
, pp. 49-69
-
-
Acevedo-Arozena, A.1
Wells, S.2
Potter, P.3
Kelly, M.4
Cox, R.D.5
-
3
-
-
17844408438
-
Unraveling innate immunity using large scale N-ethyl-N-nitrosourea mutagenesis
-
Hoebe K, Beutler B, (2005) Unraveling innate immunity using large scale N-ethyl-N-nitrosourea mutagenesis. Tissue antigens 65: 395-401.
-
(2005)
Tissue Antigens
, vol.65
, pp. 395-401
-
-
Hoebe, K.1
Beutler, B.2
-
4
-
-
29444433527
-
Connecting mammalian genome with phenome by ENU mouse mutagenesis: gene combinations specifying the immune system
-
Papathanasiou P, Goodnow CC, (2005) Connecting mammalian genome with phenome by ENU mouse mutagenesis: gene combinations specifying the immune system. Annu Rev Genet 39: 241-262.
-
(2005)
Annu Rev Genet
, vol.39
, pp. 241-262
-
-
Papathanasiou, P.1
Goodnow, C.C.2
-
5
-
-
79955767052
-
An ENU-mutagenesis screen in the mouse: identification of novel developmental gene functions
-
doi:10.1371/journal.pone.0019357
-
Wansleeben C, van Gurp L, Feitsma H, Kroon C, Rieter E, et al. (2011) An ENU-mutagenesis screen in the mouse: identification of novel developmental gene functions. PLoS ONE 6: e19357 doi:10.1371/journal.pone.0019357.
-
(2011)
PLoS ONE
, vol.6
-
-
Wansleeben, C.1
van Gurp, L.2
Feitsma, H.3
Kroon, C.4
Rieter, E.5
-
6
-
-
84864384202
-
Multiplex Chromosomal Exome Sequencing Accelerates Identification of ENU-Induced Mutations in the Mouse
-
Sun M, Mondal K, Patel V, Horner VL, Long AB, et al. (2012) Multiplex Chromosomal Exome Sequencing Accelerates Identification of ENU-Induced Mutations in the Mouse. G3 (Bethesda, Md) 2: 143-150.
-
(2012)
G3 (Bethesda, Md)
, vol.2
, pp. 143-150
-
-
Sun, M.1
Mondal, K.2
Patel, V.3
Horner, V.L.4
Long, A.B.5
-
7
-
-
79953217082
-
Rapid identification of a disease allele in mouse through whole genome sequencing and bulk segregation analysis
-
Arnold CN, Xia Y, Lin P, Ross C, Schwander M, et al. (2011) Rapid identification of a disease allele in mouse through whole genome sequencing and bulk segregation analysis. Genetics 187: 633-641.
-
(2011)
Genetics
, vol.187
, pp. 633-641
-
-
Arnold, C.N.1
Xia, Y.2
Lin, P.3
Ross, C.4
Schwander, M.5
-
8
-
-
80052865430
-
Mutation discovery in mice by whole exome sequencing
-
Fairfield H, Gilbert GJ, Barter M, Corrigan RR, Curtain M, et al. (2011) Mutation discovery in mice by whole exome sequencing. Genome Biol 12: R86.
-
(2011)
Genome Biol
, vol.12
-
-
Fairfield, H.1
Gilbert, G.J.2
Barter, M.3
Corrigan, R.R.4
Curtain, M.5
-
9
-
-
84864581937
-
Mutation mapping and identification by whole-genome sequencing
-
Leshchiner I, Alexa K, Kelsey P, Adzhubei I, Austin-Tse CA, et al. (2012) Mutation mapping and identification by whole-genome sequencing. Genome Res.
-
(2012)
Genome Res
-
-
Leshchiner, I.1
Alexa, K.2
Kelsey, P.3
Adzhubei, I.4
Austin-Tse, C.A.5
-
10
-
-
0000803318
-
Construction of multilocus genetic linkage maps in humans
-
Lander ES, Green P, (1987) Construction of multilocus genetic linkage maps in humans. Proc Natl Acad Sci U S A 84: 2363-2367.
-
(1987)
Proc Natl Acad Sci U S A
, vol.84
, pp. 2363-2367
-
-
Lander, E.S.1
Green, P.2
-
11
-
-
61449176058
-
A kinase-dead allele of Lyn attenuates autoimmune disease normally associated with Lyn deficiency
-
Verhagen AM, Wallace ME, Goradia A, Jones SA, Croom HA, et al. (2009) A kinase-dead allele of Lyn attenuates autoimmune disease normally associated with Lyn deficiency. J Immunol 182: 2020-2029.
-
(2009)
J Immunol
, vol.182
, pp. 2020-2029
-
-
Verhagen, A.M.1
Wallace, M.E.2
Goradia, A.3
Jones, S.A.4
Croom, H.A.5
-
12
-
-
0033120081
-
Cutting edge: Toll-like receptor 4 (TLR4)-deficient mice are hyporesponsive to lipopolysaccharide: evidence for TLR4 as the Lps gene product
-
Hoshino K, Takeuchi O, Kawai T, Sanjo H, Ogawa T, et al. (1999) Cutting edge: Toll-like receptor 4 (TLR4)-deficient mice are hyporesponsive to lipopolysaccharide: evidence for TLR4 as the Lps gene product. J Immunol 162: 3749-3752.
-
(1999)
J Immunol
, vol.162
, pp. 3749-3752
-
-
Hoshino, K.1
Takeuchi, O.2
Kawai, T.3
Sanjo, H.4
Ogawa, T.5
-
13
-
-
77951640946
-
A method and server for predicting damaging missense mutations
-
Adzhubei IA, Schmidt S, Peshkin L, Ramensky VE, Gerasimova A, et al. (2010) A method and server for predicting damaging missense mutations. Nat Methods 7: 248-249.
-
(2010)
Nat Methods
, vol.7
, pp. 248-249
-
-
Adzhubei, I.A.1
Schmidt, S.2
Peshkin, L.3
Ramensky, V.E.4
Gerasimova, A.5
-
14
-
-
0025338542
-
A dose-response analysis of ethylnitrosourea-induced recessive specific-locus mutations in treated spermatogonia of the mouse
-
Favor J, Sund M, Neuhauser-Klaus A, Ehling UH, (1990) A dose-response analysis of ethylnitrosourea-induced recessive specific-locus mutations in treated spermatogonia of the mouse. Mutation research 231: 47-54.
-
(1990)
Mutation Research
, vol.231
, pp. 47-54
-
-
Favor, J.1
Sund, M.2
Neuhauser-Klaus, A.3
Ehling, U.H.4
-
15
-
-
0025785269
-
ENU mutagenesis in the mouse electrophoretic specific-locus test, 1. Dose-response relationship of electrophoretically-detected mutations arising from mouse spermatogonia treated with ethylnitrosourea
-
Lewis SE, Barnett LB, Sadler BM, Shelby MD, (1991) ENU mutagenesis in the mouse electrophoretic specific-locus test, 1. Dose-response relationship of electrophoretically-detected mutations arising from mouse spermatogonia treated with ethylnitrosourea. Mutation research 249: 311-315.
-
(1991)
Mutation Research
, vol.249
, pp. 311-315
-
-
Lewis, S.E.1
Barnett, L.B.2
Sadler, B.M.3
Shelby, M.D.4
-
16
-
-
0033860483
-
Effects of ENU dosage on mouse strains
-
Justice MJ, Carpenter DA, Favor J, Neuhauser-Klaus A, Hrabe de Angelis M, et al. (2000) Effects of ENU dosage on mouse strains. Mamm Genome 11: 484-488.
-
(2000)
Mamm Genome
, vol.11
, pp. 484-488
-
-
Justice, M.J.1
Carpenter, D.A.2
Favor, J.3
Neuhauser-Klaus, A.4
Hrabe de Angelis, M.5
-
17
-
-
0012156457
-
Specific-locus test shows ethylnitrosourea to be the most potent mutagen in the mouse
-
Russell WL, Kelly EM, Hunsicker PR, Bangham JW, Maddux SC, et al. (1979) Specific-locus test shows ethylnitrosourea to be the most potent mutagen in the mouse. Proc Natl Acad Sci U S A 76: 5818-5819.
-
(1979)
Proc Natl Acad Sci U S A
, vol.76
, pp. 5818-5819
-
-
Russell, W.L.1
Kelly, E.M.2
Hunsicker, P.R.3
Bangham, J.W.4
Maddux, S.C.5
-
18
-
-
0033866043
-
Sequence-based analysis of mutagenized mice
-
Beier DR, (2000) Sequence-based analysis of mutagenized mice. Mamm Genome 11: 594-597.
-
(2000)
Mamm Genome
, vol.11
, pp. 594-597
-
-
Beier, D.R.1
-
19
-
-
0036509698
-
A gene-driven approach to the identification of ENU mutants in the mouse
-
Coghill EL, Hugill A, Parkinson N, Davison C, Glenister P, et al. (2002) A gene-driven approach to the identification of ENU mutants in the mouse. Nat Genet 30: 255-256.
-
(2002)
Nat Genet
, vol.30
, pp. 255-256
-
-
Coghill, E.L.1
Hugill, A.2
Parkinson, N.3
Davison, C.4
Glenister, P.5
-
20
-
-
3943066275
-
A gene-driven ENU-based approach to generating an allelic series in any gene
-
Quwailid MM, Hugill A, Dear N, Vizor L, Wells S, et al. (2004) A gene-driven ENU-based approach to generating an allelic series in any gene. Mamm Genome 15: 585-591.
-
(2004)
Mamm Genome
, vol.15
, pp. 585-591
-
-
Quwailid, M.M.1
Hugill, A.2
Dear, N.3
Vizor, L.4
Wells, S.5
-
21
-
-
8544219682
-
Mutation rate and predicted phenotypic target sizes in ethylnitrosourea-treated mice
-
Concepcion D, Seburn KL, Wen G, Frankel WN, Hamilton BA, (2004) Mutation rate and predicted phenotypic target sizes in ethylnitrosourea-treated mice. Genetics 168: 953-959.
-
(2004)
Genetics
, vol.168
, pp. 953-959
-
-
Concepcion, D.1
Seburn, K.L.2
Wen, G.3
Frankel, W.N.4
Hamilton, B.A.5
-
22
-
-
34447550652
-
Mutational pattern and frequency of induced nucleotide changes in mouse ENU mutagenesis
-
Takahasi KR, Sakuraba Y, Gondo Y, (2007) Mutational pattern and frequency of induced nucleotide changes in mouse ENU mutagenesis. BMC Mol Biol 8: 52.
-
(2007)
BMC Mol Biol
, vol.8
, pp. 52
-
-
Takahasi, K.R.1
Sakuraba, Y.2
Gondo, Y.3
-
24
-
-
33847618925
-
Spectrum of ENU-induced mutations in phenotype-driven and gene-driven screens in the mouse
-
Barbaric I, Wells S, Russ A, Dear TN, (2007) Spectrum of ENU-induced mutations in phenotype-driven and gene-driven screens in the mouse. Environmental and Molecular Mutagenesis 48: 124-142.
-
(2007)
Environmental and Molecular Mutagenesis
, vol.48
, pp. 124-142
-
-
Barbaric, I.1
Wells, S.2
Russ, A.3
Dear, T.N.4
-
25
-
-
24644473688
-
Molecular characterization of ENU mouse mutagenesis and archives
-
Sakuraba Y, Sezutsu H, Takahasi KR, Tsuchihashi K, Ichikawa R, et al. (2005) Molecular characterization of ENU mouse mutagenesis and archives. Biochem Biophys Res Commun 336: 609-616.
-
(2005)
Biochem Biophys Res Commun
, vol.336
, pp. 609-616
-
-
Sakuraba, Y.1
Sezutsu, H.2
Takahasi, K.R.3
Tsuchihashi, K.4
Ichikawa, R.5
-
26
-
-
0026595075
-
In vitro DNA replication implicates O2-ethyldeoxythymidine in transversion mutagenesis by ethylating agents
-
Bhanot OS, Grevatt PC, Donahue JM, Gabrielides CN, Solomon JJ, (1992) In vitro DNA replication implicates O2-ethyldeoxythymidine in transversion mutagenesis by ethylating agents. Nucleic Acids Res 20: 587-594.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 587-594
-
-
Bhanot, O.S.1
Grevatt, P.C.2
Donahue, J.M.3
Gabrielides, C.N.4
Solomon, J.J.5
-
27
-
-
0025365311
-
Use of shuttle vectors to study the molecular processing of defined carcinogen-induced DNA damage: mutagenicity of single O4-ethylthymine adducts in HeLa cells
-
Klein JC, Bleeker MJ, Lutgerink JT, van Dijk WJ, Brugghe HF, et al. (1990) Use of shuttle vectors to study the molecular processing of defined carcinogen-induced DNA damage: mutagenicity of single O4-ethylthymine adducts in HeLa cells. Nucleic Acids Res 18: 4131-4137.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 4131-4137
-
-
Klein, J.C.1
Bleeker, M.J.2
Lutgerink, J.T.3
van Dijk, W.J.4
Brugghe, H.F.5
-
28
-
-
1542563409
-
Initial sequencing and comparative analysis of the mouse genome
-
Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, et al. (2002) Initial sequencing and comparative analysis of the mouse genome. Nature 420: 520-562.
-
(2002)
Nature
, vol.420
, pp. 520-562
-
-
Waterston, R.H.1
Lindblad-Toh, K.2
Birney, E.3
Rogers, J.4
Abril, J.F.5
-
29
-
-
80052833627
-
Reducing the exome search space for mendelian diseases using genetic linkage analysis of exome genotypes
-
Smith KR, Bromhead CJ, Hildebrand MS, Shearer AE, Lockhart PJ, et al. (2011) Reducing the exome search space for mendelian diseases using genetic linkage analysis of exome genotypes. Genome Biol 12: R85.
-
(2011)
Genome Biol
, vol.12
-
-
Smith, K.R.1
Bromhead, C.J.2
Hildebrand, M.S.3
Shearer, A.E.4
Lockhart, P.J.5
-
30
-
-
84866055384
-
Autosomal-Recessive Congenital Cerebellar Ataxia Is Caused by Mutations in Metabotropic Glutamate Receptor 1
-
Guergueltcheva V, Azmanov DN, Angelicheva D, Smith KR, Chamova T, et al. (2012) Autosomal-Recessive Congenital Cerebellar Ataxia Is Caused by Mutations in Metabotropic Glutamate Receptor 1. The American Journal of Human Genetics 91: 553-564.
-
(2012)
The American Journal of Human Genetics
, vol.91
, pp. 553-564
-
-
Guergueltcheva, V.1
Azmanov, D.N.2
Angelicheva, D.3
Smith, K.R.4
Chamova, T.5
-
31
-
-
0036338150
-
Merlin-rapid analysis of dense genetic maps using sparse gene ow trees
-
Abecasis GR, Cherny SS, Cookson WO, Cardon LR, (2001) Merlin-rapid analysis of dense genetic maps using sparse gene ow trees. Nat Genet 30: 97-101.
-
(2001)
Nat Genet
, vol.30
, pp. 97-101
-
-
Abecasis, G.R.1
Cherny, S.S.2
Cookson, W.O.3
Cardon, L.R.4
-
32
-
-
84860564877
-
Whole-Exome Sequencing and Homozygosity Analysis Implicate Depolarization-Regulated Neuronal Genes in Autism
-
doi:10.1371/journal.pgen.1002635
-
Chahrour MH, Yu TW, Lim ET, Ataman B, Coulter ME, et al. (2012) Whole-Exome Sequencing and Homozygosity Analysis Implicate Depolarization-Regulated Neuronal Genes in Autism. PLoS Genet 8: e1002635 doi:10.1371/journal.pgen.1002635.
-
(2012)
PLoS Genet
, vol.8
-
-
Chahrour, M.H.1
Yu, T.W.2
Lim, E.T.3
Ataman, B.4
Coulter, M.E.5
-
33
-
-
79952598349
-
Identity-by-descent filtering of exome sequence data for disease-gene identification in autosomal recessive disorders
-
Rodelsperger C, Krawitz P, Bauer S, Hecht J, Bigham AW, et al. (2011) Identity-by-descent filtering of exome sequence data for disease-gene identification in autosomal recessive disorders. Bioinformatics 27: 829-836.
-
(2011)
Bioinformatics
, vol.27
, pp. 829-836
-
-
Rodelsperger, C.1
Krawitz, P.2
Bauer, S.3
Hecht, J.4
Bigham, A.W.5
-
34
-
-
77951799158
-
Analysis of Genetic Inheritance in a Family Quartet by Whole-Genome Sequencing
-
Roach JC, Glusman G, Smit AFA, Huff CD, Hubley R, et al. (2010) Analysis of Genetic Inheritance in a Family Quartet by Whole-Genome Sequencing. Science 328: 636-639.
-
(2010)
Science
, vol.328
, pp. 636-639
-
-
Roach, J.C.1
Glusman, G.2
Smit, A.F.A.3
Huff, C.D.4
Hubley, R.5
-
35
-
-
33846082255
-
A series of ENU-induced single-base substitutions in a long-range cis-element altering Sonic hedgehog expression in the developing mouse limb bud
-
Masuya H, Sezutsu H, Sakuraba Y, Sagai T, Hosoya M, et al. (2007) A series of ENU-induced single-base substitutions in a long-range cis-element altering Sonic hedgehog expression in the developing mouse limb bud. Genomics 89: 207-214.
-
(2007)
Genomics
, vol.89
, pp. 207-214
-
-
Masuya, H.1
Sezutsu, H.2
Sakuraba, Y.3
Sagai, T.4
Hosoya, M.5
-
36
-
-
84864232091
-
Massively parallel sequencing of the mouse exome to accurately identify rare, induced mutations: an immediate source for thousands of new mouse models
-
Andrews TD, Whittle B, Field MA, Balakishnan B, Zhang Y, et al. (2012) Massively parallel sequencing of the mouse exome to accurately identify rare, induced mutations: an immediate source for thousands of new mouse models. Open biology 2: 120061.
-
(2012)
Open Biology
, vol.2
, pp. 120061
-
-
Andrews, T.D.1
Whittle, B.2
Field, M.A.3
Balakishnan, B.4
Zhang, Y.5
-
37
-
-
27144455205
-
Allegro version 2
-
Gudbjartsson DF, Thorvaldsson T, Kong A, Gunnarsson G, Ingolfsdottir A, (2005) Allegro version 2. Nat Genet 37: 1015-1016.
-
(2005)
Nat Genet
, vol.37
, pp. 1015-1016
-
-
Gudbjartsson, D.F.1
Thorvaldsson, T.2
Kong, A.3
Gunnarsson, G.4
Ingolfsdottir, A.5
-
38
-
-
84863879038
-
Fine-Scale Maps of Recombination Rates and Hotspots in the Mouse Genome
-
Brunschwig H, Levi L, Ben-David E, Williams RW, Yakir B, et al. (2012) Fine-Scale Maps of Recombination Rates and Hotspots in the Mouse Genome. Genetics 191: 757-764.
-
(2012)
Genetics
, vol.191
, pp. 757-764
-
-
Brunschwig, H.1
Levi, L.2
Ben-David, E.3
Williams, R.W.4
Yakir, B.5
-
39
-
-
67349172256
-
A new standard genetic map for the laboratory mouse
-
Cox A, Ackert-Bicknell CL, Dumont BL, Ding Y, Bell JT, et al. (2009) A new standard genetic map for the laboratory mouse. Genetics 182: 1335-1344.
-
(2009)
Genetics
, vol.182
, pp. 1335-1344
-
-
Cox, A.1
Ackert-Bicknell, C.L.2
Dumont, B.L.3
Ding, Y.4
Bell, J.T.5
-
40
-
-
0034813659
-
Genome-wide ENU mutagenesis to reveal immune regulators
-
Nelms KA, Goodnow CC, (2001) Genome-wide ENU mutagenesis to reveal immune regulators. Immunity 15: 409-418.
-
(2001)
Immunity
, vol.15
, pp. 409-418
-
-
Nelms, K.A.1
Goodnow, C.C.2
-
41
-
-
79956307251
-
Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads
-
Lunter G, Goodson M, (2011) Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads. Genome Res 21: 936-939.
-
(2011)
Genome Res
, vol.21
, pp. 936-939
-
-
Lunter, G.1
Goodson, M.2
-
42
-
-
77956534324
-
ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
-
Wang K, Li M, Hakonarson H, (2010) ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res 38: e164.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Wang, K.1
Li, M.2
Hakonarson, H.3
-
43
-
-
77951770756
-
BEDTools: a exible suite of utilities for comparing genomic features
-
Quinlan AR, Hall IM, (2010) BEDTools: a exible suite of utilities for comparing genomic features. Bioinformatics 26: 841-842.
-
(2010)
Bioinformatics
, vol.26
, pp. 841-842
-
-
Quinlan, A.R.1
Hall, I.M.2
-
44
-
-
0024610919
-
A Tutorial on Hidden Markov-Models and Selected Applications in Speech Recognition
-
Rabiner LR, (1989) A Tutorial on Hidden Markov-Models and Selected Applications in Speech Recognition. Proceedings of the Ieee 77: 257-286.
-
(1989)
Proceedings of the Ieee
, vol.77
, pp. 257-286
-
-
Rabiner, L.R.1
-
45
-
-
80053955756
-
Integration of SNP genotyping confidence scores in IBD inference
-
Markus B, Birk OS, Geiger D, (2011) Integration of SNP genotyping confidence scores in IBD inference. Bioinformatics 27: 2880-2887.
-
(2011)
Bioinformatics
, vol.27
, pp. 2880-2887
-
-
Markus, B.1
Birk, O.S.2
Geiger, D.3
-
46
-
-
84863150047
-
Imputation of Single-Nucleotide Polymorphisms in Inbred Mice Using Local Phylogeny
-
Wang JR, de Villena FPM, Lawson HA, Cheverud JM, Churchill GA, et al. (2012) Imputation of Single-Nucleotide Polymorphisms in Inbred Mice Using Local Phylogeny. Genetics 190: 449-458.
-
(2012)
Genetics
, vol.190
, pp. 449-458
-
-
Wang, J.R.1
de Villena, F.P.M.2
Lawson, H.A.3
Cheverud, J.M.4
Churchill, G.A.5
-
47
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics 25: 2078-2079.
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
|