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Volumn 172, Issue , 2013, Pages 61-67

Thermodynamic parameters of anion binding to halorhodopsin from Natronomonas pharaonis by isothermal titration calorimetry

Author keywords

Anion binding; ITC; Microbial rhodopsin; Opsin; Thermodynamic parameters

Indexed keywords

ANION; HALORHODOPSIN; OPSIN; SCHIFF BASE;

EID: 84873464445     PISSN: 03014622     EISSN: 18734200     Source Type: Journal    
DOI: 10.1016/j.bpc.2013.01.001     Document Type: Article
Times cited : (8)

References (41)
  • 1
    • 0017694434 scopus 로고
    • Two possible roles of bacteriorhodopsin; a comparative study of strains of Halobacterium halobium differing in pigmentation
    • DOI 10.1016/0006-291X(77)91245-1
    • A. Matsuno-Yagi, and Y. Mukohata Two possible roles of bacteriorhodopsin; A comparative study of strains of Halobacterium halobium differing in pigmentation Biochemical and Biophysical Research Communications 78 1977 237 243 (Pubitemid 8186173)
    • (1977) Biochemical and Biophysical Research Communications , vol.78 , Issue.1 , pp. 237-243
    • Matsuno Yagi, A.1    Mukohata, Y.2
  • 2
  • 3
    • 0025304015 scopus 로고
    • Halorhodopsin, a light-driven electrogenic chloride-transport system
    • J.K. Lanyi Halorhodopsin, a light-driven electrogenic chloride-transport system Physiological Reviews 70 1990 319 330 (Pubitemid 20140184)
    • (1990) Physiological Reviews , vol.70 , Issue.2 , pp. 319-330
    • Lanyi, J.K.1
  • 4
    • 0342484454 scopus 로고    scopus 로고
    • Analogies between halorhodopsin and bacteriorhodopsin
    • G. Váró Analogies between halorhodopsin and bacteriorhodopsin Biochimica et Biophysica Acta 1460 2000 220 229
    • (2000) Biochimica et Biophysica Acta , vol.1460 , pp. 220-229
    • Váró, G.1
  • 5
    • 0036667739 scopus 로고    scopus 로고
    • Halorhodopsin: Light-driven ion pumping made simple?
    • L.O. Essen Halorhodopsin: light-driven ion pumping made simple? Current Opinion in Structural Biology 12 2002 516 522
    • (2002) Current Opinion in Structural Biology , vol.12 , pp. 516-522
    • Essen, L.O.1
  • 6
    • 0015244581 scopus 로고
    • Rhodopsin-like protein from the purple membrane of Halobacterium halobium
    • D. Oesterhelt, and W. Stoecknius Rhodopsin-like protein from the purple membrane of Halobacterium halobium Nature: New Biology 233 1971 149 152
    • (1971) Nature: New Biology , vol.233 , pp. 149-152
    • Oesterhelt, D.1    Stoecknius, W.2
  • 7
    • 0032987196 scopus 로고    scopus 로고
    • Closing in on bacteriorhodopsin: Progress in understanding the molecule
    • DOI 10.1146/annurev.biophys.28.1.367
    • U. Haupts, J. Tittor, and D. Oesterhelt Closing in on bacteriorhodopsin: progress in understanding the molecule Annual Review of Biophysics and Biomolecular Structure 28 1999 367 399 (Pubitemid 29319263)
    • (1999) Annual Review of Biophysics and Biomolecular Structure , vol.28 , pp. 367-399
    • Haupts, U.1    Tittor, J.2    Oesterhelt, D.3
  • 8
    • 2342460436 scopus 로고    scopus 로고
    • Bacteriorhodopsin
    • DOI 10.1146/annurev.physiol.66.032102.150049
    • J.K. Lanyi Bacteriorhodopsin Annual Review of Physiology 66 2004 665 688 (Pubitemid 40614459)
    • (2004) Annual Review of Physiology , vol.66 , pp. 665-688
    • Lanyi, J.K.1
  • 10
    • 0024968418 scopus 로고
    • Transient spectroscopy of bacterial rhodopsins with an optical multichannel analyzer. 1. Comparison of the photocycles of bacteriorhodopsin and halorhodopsin
    • L. Zimányi, L. Keszthelyi, and J.K. Lanyi Transient spectroscopy of bacterial rhodopsins with an optical multichannel analyzer. 1. Comparison of the photocycles of bacteriorhodopsin and halorhodopsin Biochemistry 28 1989 5165 5172
    • (1989) Biochemistry , vol.28 , pp. 5165-5172
    • Zimányi, L.1    Keszthelyi, L.2    Lanyi, J.K.3
  • 12
    • 0028869129 scopus 로고
    • Light-driven chloride ion transport by halorhodopsin from Natronobacterium pharaonis. 1. The photochemical Cycle
    • G. Váró, L.S. Brown, J. Sasaki, H. Kandori, A. Maeda, R. Needleman, and J.K. Lanyi Light-driven chloride ion transport by halorhodopsin from Natronobacterium pharaonis. 1. The photochemical Cycle Biochemistry 34 1995 14490 14499
    • (1995) Biochemistry , vol.34 , pp. 14490-14499
    • Váró, G.1    Brown, L.S.2    Sasaki, J.3    Kandori, H.4    Maeda, A.5    Needleman, R.6    Lanyi, J.K.7
  • 13
    • 0034874537 scopus 로고    scopus 로고
    • Temperature and halide dependence of the photocycle of halorhodopsin from Natronobacterium pharaonis
    • I. Chizhov, and M. Engelhard Temperature and halide dependence of the photocycle of halorhodopsin from Natronobacterium pharaonis Biophysical Journal 81 2001 1600 1612 (Pubitemid 32783600)
    • (2001) Biophysical Journal , vol.81 , Issue.3 , pp. 1600-1612
    • Chizhov, I.1    Engelhard, M.2
  • 14
    • 0028808334 scopus 로고
    • Light-driven chloride ion transport by halorhodopsin from Natronobacterium pharaonis. 2. Chloride release and uptake, protein conformation change, and thermodynamics
    • G. Váró, R. Needleman, and J.K. Lanyi Light-driven chloride ion transport by halorhodopsin from Natronobacterium pharaonis. 2. Chloride release and uptake, protein conformation change, and thermodynamics Biochemistry 34 1995 14500 14507
    • (1995) Biochemistry , vol.34 , pp. 14500-14507
    • Váró, G.1    Needleman, R.2    Lanyi, J.K.3
  • 15
    • 0032992449 scopus 로고    scopus 로고
    • Time-resolved measurements of photovoltage generation by bacteriorhodopsin and halorhodopsin adsorbed on a thin polymer film
    • E. Muneyuki, C. Shibazaki, H. Ohtani, D. Okuno, M. Asaumi, and T. Mogi Time-resolved measurements of photovoltage generation by bacteriorhodopsin and halorhodopsin adsorbed on a thin polymer film Journal of Biochemistry 125 1999 270 276 (Pubitemid 29112291)
    • (1999) Journal of Biochemistry , vol.125 , Issue.2 , pp. 270-276
    • Muneyuki, E.1    Shibazaki, C.2    Ohtani, H.3    Okuno, D.4    Asaumi, M.5    Mogi, T.6
  • 16
    • 0034075676 scopus 로고    scopus 로고
    • Charge motions during the photocycle of pharaonis halorhodopsin
    • K. Ludmann, G. Ibron, J.K. Lanyi, and G. Váró Charge motions during the photocycle of pharaonis halorhodopsin Biophysical Journal 78 2000 959 966 (Pubitemid 30211853)
    • (2000) Biophysical Journal , vol.78 , Issue.2 , pp. 959-966
    • Ludmann, K.1    Ibron, G.2    Lanyi, J.K.3    Varo, G.4
  • 18
    • 0034717007 scopus 로고    scopus 로고
    • Structure of the light-driven chloride pump halorhodopsin at 1.8 Å Resolution
    • DOI 10.1126/science.288.5470.1390
    • M. Kolbe, H. Besir, L.-O. Essen, and D. Oesterhelt Structure of the light-driven chloride pump halorhodopsin at 1.8 Å resolution Science 288 2000 1390 1396 (Pubitemid 30366319)
    • (2000) Science , vol.288 , Issue.5470 , pp. 1390-1396
    • Kolbe, M.1    Besir, H.2    Essen, L.-O.3    Oesterhelt, D.4
  • 20
    • 0028286154 scopus 로고
    • Blue halorhodopsin from Natronobacterium pharaonis: Wavelength regulation by anions
    • B. Scharf, and M. Engelhard Blue halorhodopsin from Natronobacterium pharaonis: wavelength regulation by anions Biochemistry 33 1994 (6387-6393.K)
    • (1994) Biochemistry , vol.33 , pp. 6387-6393
    • Scharf, B.1    Engelhard, M.2
  • 21
    • 0033609065 scopus 로고    scopus 로고
    • Chloride concentration dependency of the electrogenic activity of halorhodopsin
    • D. Okuno, M. Asami, and E. Muneyuki Chloride concentration dependency of the electrogenic activity of halorhodopsin Biochemistry 38 1999 5422 5429
    • (1999) Biochemistry , vol.38 , pp. 5422-5429
    • Okuno, D.1    Asami, M.2    Muneyuki, E.3
  • 22
    • 33846466033 scopus 로고    scopus 로고
    • The protonated Schiff base of halorhodopsin from Natronobacterium pharaonis is hydrolyzed at elevated temperatures
    • DOI 10.1562/2005-12-16-RA-756
    • K. Mevorat-Kaplan, V. Brumfeld, M. Engelhard, and M. Scheves The protonated Schiff base of halorhodopsin from Natronobacterium pharaonis is hydrolyzed at elevated temperature Photochemistry and Photobiology 82 2006 1414 1421 (Pubitemid 46158827)
    • (2006) Photochemistry and Photobiology , vol.82 , Issue.6 , pp. 1414-1421
    • Mevorat-Kaplan, K.1    Brumfeld, V.2    Engelhard, M.3    Sheves, M.4
  • 23
    • 0032963356 scopus 로고    scopus 로고
    • Purification of histidine tagged bacteriorhodopsin, pharaonis halorhodopsin and pharaonis sensory rhodopsin II functionally expressed in Escherichia coli
    • DOI 10.1016/S0014-5793(98)01659-7, PII S0014579398016597
    • I.P. Hohenfeld, A.A. Wegener, and M. Engelhard Purification of histidine tagged bacteriorhodopsin, pharaonis halorhodopsin and pharaonis sensory rhodopsin II functionally expressed in Escherichia coli FEBS Letters 442 1999 198 202 (Pubitemid 29070833)
    • (1999) FEBS Letters , vol.442 , Issue.2-3 , pp. 198-202
    • Hohenfeld, I.P.1    Wegener, A.A.2    Engelhard, M.3
  • 24
    • 0037133298 scopus 로고    scopus 로고
    • Stopped-flow analysis on anion binding to blue-form halorhodopsin from Natronobacterium pharaonis: Comparison with the anion-uptake process during the photocycle
    • DOI 10.1021/bi011788g
    • M. Sato, T. Kanamori, N. Kamo, M. Demura, and K. Nitta Stopped-flow analysis on anion binding to blue-form halorhodopsin from Natronobacterium pharaonis: comparison with the anion-uptake process during the photocycle Biochemistry 41 2002 2452 2458 (Pubitemid 34160909)
    • (2002) Biochemistry , vol.41 , Issue.7 , pp. 2452-2458
    • Sato, M.1    Kanamori, T.2    Kamo, N.3    Demura, M.4    Nitta, K.5
  • 25
    • 25444496709 scopus 로고    scopus 로고
    • Disassembling and bleaching of chloride-free pharaonis halorhodopsin by octyl-β-glucoside
    • DOI 10.1021/bi0511235
    • M. Kubo, M. Sato, T. Aizawa, C. Kojima, N. Kamo, M. Mizuguchi, K. Kawano, and M. Demura Disassembling and bleaching of chloride-free pharaonis halorhodopsin by octyl-β-glucoside Biochemistry 44 2005 12923 12931 (Pubitemid 41377273)
    • (2005) Biochemistry , vol.44 , Issue.39 , pp. 12923-12931
    • Kubo, M.1    Sato, M.2    Aizawa, T.3    Kojima, C.4    Kamo, N.5    Mizuguchi, M.6    Kawano, K.7    Demura, M.8
  • 26
    • 0038692912 scopus 로고    scopus 로고
    • Ser-130 of Natronobacterium pharaonis halorhodopsin is important for the chloride binding
    • DOI 10.1016/S0301-4622(02)00368-X, PII S030146220200368X
    • M. Sato, T. Kikukawa, T. Araiso, H. Okita, K. Shimono, N. Kamo, M. Demura, and K. Nitta Ser-130 of Natronobacterium pharaonis halorhodopsin is important for the chloride binding Biophysical Chemistry 104 2003 209 216 (Pubitemid 36794472)
    • (2003) Biophysical Chemistry , vol.104 , Issue.1 , pp. 209-216
    • Sato, M.1    Kikukawa, T.2    Araiso, T.3    Okita, H.4    Shimono, K.5    Kamo, N.6    Demura, M.7    Nitta, K.8
  • 27
    • 0042821607 scopus 로고    scopus 로고
    • Roles of ser130 and Thr126 in chloride binding and photocycle of pharaonis halorhodopsin
    • DOI 10.1093/jb/mvg123
    • M. Sato, T. Kikukawa, T. Araiso, H. Okita, K. Shimono, N. Kamo, M. Demura, and K. Nitta Role of Ser130 and Thr126 in chloride binding and photocycle of pharaonis halorhodopsin Journal of Biochemistry 134 2003 151 158 (Pubitemid 37071191)
    • (2003) Journal of Biochemistry , vol.134 , Issue.1 , pp. 151-158
    • Sato, M.1    Kikukawa, T.2    Araiso, T.3    Okita, H.4    Shimono, K.5    Kamo, N.6    Demura, M.7    Nitta, K.8
  • 28
    • 15444378199 scopus 로고    scopus 로고
    • Role of putative anion-binding sites in cytoplasmic and extracellular channels of Natronomonas pharaonis halorhodopsin
    • DOI 10.1021/bi047500f
    • M. Sato, M. Kubo, T. Aizawa, N. Kamo, T. Kikukawa, K. Nitta, and M. Demura Role of putative anion-binding sites in cytoplasmic and extracellular channels of Natronomonas pharaonis halorhodopsin Biochemistry 44 2005 4775 4784 (Pubitemid 40396756)
    • (2005) Biochemistry , vol.44 , Issue.12 , pp. 4775-4784
    • Sato, M.1    Kubo, M.2    Aizawa, T.3    Kamo, N.4    Kikukawa, T.5    Nitta, K.6    Demura, M.7
  • 30
    • 1542743836 scopus 로고    scopus 로고
    • Proton Release and Uptake of pharaonis Phoborhodopsin (Sensory Rhodopsin II) Reconstituted into Phospholipids
    • DOI 10.1021/bi035960n
    • M. Iwamoto, C. Hasegawa, Y. Sudo, K. Shimono, T. Araiso, and N. Kamo Proton release and uptake of pharaonis phoborhodopsin (sensory rhodopsin II) reconstituted into phospholipids Biochemistry 43 2004 3195 3203 (Pubitemid 38352268)
    • (2004) Biochemistry , vol.43 , Issue.11 , pp. 3195-3203
    • Iwamoto, M.1    Hasegawa, C.2    Sudo, Y.3    Shimono, K.4    Araiso, T.5    Kamo, N.6
  • 31
    • 60849127263 scopus 로고    scopus 로고
    • A tin oxide transparent electrode provides the means for rapid time-resolved pH measurements: Application to photoinduced proton transfer of bacteriorhodopsin and proteorhodopsin
    • J. Tamogami, T. Kikukawa, S. Miyauchi, E. Muneyuki, and N. Kamo A tin oxide transparent electrode provides the means for rapid time-resolved pH measurements: application to photoinduced proton transfer of bacteriorhodopsin and proteorhodopsin Photochemistry and Photobiology 85 2009 578 589
    • (2009) Photochemistry and Photobiology , vol.85 , pp. 578-589
    • Tamogami, J.1    Kikukawa, T.2    Miyauchi, S.3    Muneyuki, E.4    Kamo, N.5
  • 32
    • 0025311055 scopus 로고
    • Anion binding to the chloride pump, halorhodopsin, and its implications for the transport mechanism
    • DOI 10.1016/0014-5793(90)80869-K
    • J.K. Lanyi, A. Duschl, G. Váro, and L. Zimányi Anion binding to the chloride pump, halorhodopsin, and its implications for the transport mechanism FEBS Letters 265 1990 1 6 (Pubitemid 20189380)
    • (1990) FEBS Letters , vol.265 , Issue.1-2 , pp. 1-6
    • Lanyi, J.K.1    Duschl, A.2    Varo, G.3    Zimanyi, L.4
  • 34
    • 0030694042 scopus 로고    scopus 로고
    • --dependent photovoltage responses of bacteriorhodopsin: Comparison of the D85T and D85S mutants and wild-type acid purple form
    • DOI 10.1016/S0014-5793(97)01390-2, PII S0014579397013902
    • I.V. Kalaidzidis, and A.D. Kaulen Cl-dependent photovoltage responses of bacteriorhodopsin: comparison of the D85T and D85S mutants and wild-type acid purple form FEBS Letters 418 1997 239 242 (Pubitemid 27515932)
    • (1997) FEBS Letters , vol.418 , Issue.3 , pp. 239-242
    • Kalaidzidis, I.V.1    Kaulen, A.D.2
  • 35
    • 0031583474 scopus 로고    scopus 로고
    • Chloride and proton transport in bacteriorhodopsin mutant D85T: Different modes of ion translocation in a retinal protein
    • DOI 10.1006/jmbi.1997.1204
    • J. Tittor, U. Haupts, C. Haupts, D. Oesterhelt, A. Becker, and E. Bamberg Chloride and proton transport in bacteriorhodopsin mutant D85T: different modes of ion translocation in a retinal protein Journal of Molecular Biology 271 1997 405 416 (Pubitemid 27348507)
    • (1997) Journal of Molecular Biology , vol.271 , Issue.3 , pp. 405-416
    • Tittor, J.1    Haupts, U.2    Haupts, C.3    Oesterhelt, D.4    Becker, A.5    Bamberg, E.6
  • 37
    • 0037974251 scopus 로고    scopus 로고
    • Crystal structure of the bromide-bound D85S mutant of bacteriorhodopsin: Principles of ion pumping
    • M.T. Facciotti, V.S. Cheung, D. Nguyen, S. Rouhani, and R.M. Glaeser Crystal structure of the bromide-bound D85S mutant of bacteriorhodopsin: principles of ion pumping Biophysical Journal 85 2003 451 458 (Pubitemid 36753649)
    • (2003) Biophysical Journal , vol.85 , Issue.1 , pp. 451-458
    • Facciotti, M.T.1    Cheung, V.S.2    Nguyen, D.3    Rouhani, S.4    Glaeser, R.M.5
  • 38
    • 2142700032 scopus 로고    scopus 로고
    • Specificity of Anion Binding in the Substrate Pocket of Bacteriorhodopsin
    • DOI 10.1021/bi035757s
    • M.T. Facciotti, V.S. Cheung, C.S. Lunde, S. Rouhani, N.S. Baliga, and R.M. Glaeser Specificity of anion binding in the substrate pocket of bacteriorhodopsin Biochemistry 43 2004 4934 4943 (Pubitemid 38544447)
    • (2004) Biochemistry , vol.43 , Issue.17 , pp. 4934-4943
    • Facciotti, M.T.1    Cheung, V.S.2    Lunde, C.S.3    Rouhani, S.4    Baliga, N.S.5    Glaeser, R.M.6
  • 39
    • 0039355490 scopus 로고    scopus 로고
    • Specific arginine and threonine residues control anion binding and transport in the light-driven chloride pump halorhodopsin
    • DOI 10.1093/emboj/16.13.3813
    • M. Rüdiger, and D. Oesterhelt Specific arginine and threonine residues control anion binding and transport in the light-driven chloride pump halorhodopsin EMBO Journal 16 1997 3813 3821 (Pubitemid 27280997)
    • (1997) EMBO Journal , vol.16 , Issue.13 , pp. 3813-3821
    • Rudiger, M.1    Oesterhelt, D.2
  • 41
    • 0030015010 scopus 로고    scopus 로고
    • Proton transport by halorhodopsin
    • DOI 10.1021/bi9601159
    • G. Váró, L.S. Brown, R. Needleman, and J.K. Lanyi Proton transport by halorhodopsin Biochemistry 35 1996 6604 6611 (Pubitemid 26172418)
    • (1996) Biochemistry , vol.35 , Issue.21 , pp. 6604-6611
    • Varo, G.1    Brown, L.S.2    Needleman, R.3    Lanyi, J.K.4


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