메뉴 건너뛰기




Volumn 52, Issue 5, 2013, Pages 773-785

Interconverting conformations of slipped-DNA junctions formed by trinucleotide repeats affect repair outcome

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY STRAND; DNA REPAIR PROTEINS; HIGHER EFFICIENCY; NEUROLOGICAL DISEASE; TRANSIENT INTERMEDIATE;

EID: 84873330287     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi301369b     Document Type: Article
Times cited : (31)

References (61)
  • 2
    • 25844438495 scopus 로고    scopus 로고
    • Repeat instability: Mechanisms of dynamic mutations
    • DOI 10.1038/nrg1689
    • Pearson, C. E., Nichol Edamura, K., and Cleary, J. D. (2005) Repeat instability: Mechanisms of dynamic mutations Nat. Rev. Genet. 6, 729-742 (Pubitemid 41400831)
    • (2005) Nature Reviews Genetics , vol.6 , Issue.10 , pp. 729-742
    • Pearson, C.E.1    Edamura, K.N.2    Cleary, J.D.3
  • 3
    • 34250878426 scopus 로고    scopus 로고
    • Expandable DNA repeats and human disease
    • DOI 10.1038/nature05977, PII NATURE05977
    • Mirkin, S. M. (2007) Expandable DNA repeats and human disease Nature 447, 932-940 (Pubitemid 46975760)
    • (2007) Nature , vol.447 , Issue.7147 , pp. 932-940
    • Mirkin, S.M.1
  • 4
    • 77649144557 scopus 로고    scopus 로고
    • Repeat instability as the basis for human diseases and as a potential target for therapy
    • Lopez Castel, A., Cleary, J. D., and Pearson, C. E. (2010) Repeat instability as the basis for human diseases and as a potential target for therapy Nat. Rev. Mol. Cell Biol. 11, 165-170
    • (2010) Nat. Rev. Mol. Cell Biol. , vol.11 , pp. 165-170
    • Lopez Castel, A.1    Cleary, J.D.2    Pearson, C.E.3
  • 5
    • 79956016292 scopus 로고    scopus 로고
    • Huntington's and myotonic dystrophy hESCs: Down-regulated trinucleotide repeat instability and mismatch repair machinery expression upon differentiation
    • Seriola, A., Spits, C., Simard, J. P., Hilven, P., Haentjens, P., Pearson, C. E., and Sermon, K. (2011) Huntington's and myotonic dystrophy hESCs: Down-regulated trinucleotide repeat instability and mismatch repair machinery expression upon differentiation Hum. Mol. Genet. 20, 176-185
    • (2011) Hum. Mol. Genet. , vol.20 , pp. 176-185
    • Seriola, A.1    Spits, C.2    Simard, J.P.3    Hilven, P.4    Haentjens, P.5    Pearson, C.E.6    Sermon, K.7
  • 7
    • 0029883805 scopus 로고    scopus 로고
    • Alternative structures in duplex DNA formed within the trinucleotide repeats of the myotonic dystrophy and fragile X loci
    • DOI 10.1021/bi9601013
    • Pearson, C. E. and Sinden, R. R. (1996) Alternative structures in duplex DNA formed within the trinucleotide repeats of the myotonic dystrophy and fragile X loci Biochemistry 35, 5041-5053 (Pubitemid 26126721)
    • (1996) Biochemistry , vol.35 , Issue.15 , pp. 5041-5053
    • Pearson, C.E.1    Sinden, R.R.2
  • 8
    • 0030752987 scopus 로고    scopus 로고
    • Human MSH2 binds to trinucleotide repeat DNA structures associated with neurodegenerative diseases
    • DOI 10.1093/hmg/6.7.1117
    • Pearson, C. E., Ewel, A., Acharya, S., Fishel, R. A., and Sinden, R. R. (1997) Human MSH2 binds to trinucleotide repeat DNA structures associated with neurodegenerative diseases Hum. Mol. Genet. 6, 1117-1123 (Pubitemid 27308398)
    • (1997) Human Molecular Genetics , vol.6 , Issue.7 , pp. 1117-1123
    • Pearson, C.E.1    Ewel, A.2    Acharya, S.3    Fishel, R.A.4    Sinden, R.R.5
  • 9
    • 2642689662 scopus 로고    scopus 로고
    • Structural analysis of slipped-strand DNA (S-DNA) formed in (CTG)(n)·(CAG)(n) repeats from the myotonic dystrophy locus
    • DOI 10.1093/nar/26.3.816
    • n repeats from the myotonic dystrophy locus Nucleic Acids Res. 26, 816-823 (Pubitemid 28291282)
    • (1998) Nucleic Acids Research , vol.26 , Issue.3 , pp. 816-823
    • Pearson, C.E.1    Wang, Y.-H.2    Griffith, J.D.3    Sinden, R.R.4
  • 10
    • 0032562132 scopus 로고    scopus 로고
    • Interruptions in the triplet repeats of SCA1 and FRAXA reduce the propensity and complexity of slipped strand DNA (S-DNA) formation
    • DOI 10.1021/bi972546c
    • Pearson, C. E., Eichler, E. E., Lorenzetti, D., Kramer, S. F., Zoghbi, H. Y., Nelson, D. L., and Sinden, R. R. (1998) Interruptions in the triplet repeats of SCA1 and FRAXA reduce the propensity and complexity of slipped strand DNA (S-DNA) formation Biochemistry 37, 2701-2708 (Pubitemid 28119348)
    • (1998) Biochemistry , vol.37 , Issue.8 , pp. 2701-2708
    • Pearson, C.E.1    Eichler, E.E.2    Lorenzetti, D.3    Kramer, S.F.4    Zoghbi, H.Y.5    Nelson, D.L.6    Sinden, R.R.7
  • 11
    • 0037109206 scopus 로고    scopus 로고
    • Slipped-strand DNAs formed by long (CAG)·(CTG) repeats: Slipped-out repeats and slip-out junctions
    • Pearson, C. E., Tam, M., Wang, Y. H., Montgomery, S. E., Dar, A. C., Cleary, J. D., and Nichol, K. (2002) Slipped-strand DNAs formed by long (CAG)(CTG) repeats: Slipped-out repeats and slip-out junctions Nucleic Acids Res. 30, 4534-4547 (Pubitemid 35277264)
    • (2002) Nucleic Acids Research , vol.30 , Issue.20 , pp. 4534-4547
    • Pearson, C.E.1    Tam, M.2    Wang, Y.-H.3    Montgomery, S.E.4    Dar, A.C.5    Cleary, J.D.6    Nichol, K.7
  • 12
    • 0141780849 scopus 로고    scopus 로고
    • Fidelity of primate cell repair of a double-strand break within a (CTG)·(CAG) tract: Effect of slipped DNA structures
    • DOI 10.1074/jbc.M304284200
    • Marcadier, J. L. and Pearson, C. E. (2003) Fidelity of primate cell repair of a double-strand break within a (CTG)·(CAG) tract. Effect of slipped DNA structures J. Biol. Chem. 278, 33848-33856 (Pubitemid 37553219)
    • (2003) Journal of Biological Chemistry , vol.278 , Issue.36 , pp. 33848-33856
    • Marcadier, J.L.1    Pearson, C.E.2
  • 13
    • 0141905026 scopus 로고    scopus 로고
    • Slipped (CTG)·(CAG) repeats of the myotonic dystrophy locus: Surface probing with Anti-DNA antibodies
    • DOI 10.1016/S0022-2836(03)00880-5
    • Tam, M., Erin Montgomery, S., Kekis, M., Stollar, B. D., Price, G. B., and Pearson, C. E. (2003) Slipped (CTG)·(CAG) repeats of the myotonic dystrophy locus: Surface probing with anti-DNA antibodies J. Mol. Biol. 332, 585-600 (Pubitemid 37075983)
    • (2003) Journal of Molecular Biology , vol.332 , Issue.3 , pp. 585-600
    • Tam, M.1    Montgomery, S.E.2    Kekis, M.3    Stollar, B.D.4    Price, G.B.5    Pearson, C.E.6
  • 14
    • 25844524498 scopus 로고    scopus 로고
    • Slipped (CTG)•(CAG) repeats can be correctly repaired, escape repair or undergo error-prone repair
    • DOI 10.1038/nsmb959, PII NSMB959
    • Panigrahi, G. B., Lau, R., Montgomery, S. E., Leonard, M. R., and Pearson, C. E. (2005) Slipped (CTG)*(CAG) repeats can be correctly repaired, escape repair or undergo error-prone repair Nat. Struct. Mol. Biol. 12, 654-662 (Pubitemid 43086270)
    • (2005) Nature Structural and Molecular Biology , vol.12 , Issue.8 , pp. 654-662
    • Panigrahi, G.B.1    Lau, R.2    Montgomery, S.E.3    Leonard, M.R.4    Pearson, C.E.5
  • 15
    • 77955439716 scopus 로고    scopus 로고
    • Isolated short CTG/CAG DNA slip-outs are repaired efficiently by hMutSbeta, but clustered slip-outs are poorly repaired
    • Panigrahi, G. B., Slean, M. M., Simard, J. P., Gileadi, O., and Pearson, C. E. (2010) Isolated short CTG/CAG DNA slip-outs are repaired efficiently by hMutSbeta, but clustered slip-outs are poorly repaired Proc. Natl. Acad. Sci. U.S.A. 107, 12593-12598
    • (2010) Proc. Natl. Acad. Sci. U.S.A. , vol.107 , pp. 12593-12598
    • Panigrahi, G.B.1    Slean, M.M.2    Simard, J.P.3    Gileadi, O.4    Pearson, C.E.5
  • 16
    • 0028595722 scopus 로고
    • Binding of mismatched microsatellite DNA sequences by the human MSH2 protein
    • Fishel, R., Ewel, A., Lee, S., Lescoe, M. K., and Griffith, J. (1994) Binding of mismatched microsatellite DNA sequences by the human MSH2 protein Science 266, 1403-1405
    • (1994) Science , vol.266 , pp. 1403-1405
    • Fishel, R.1    Ewel, A.2    Lee, S.3    Lescoe, M.K.4    Griffith, J.5
  • 17
    • 0027988576 scopus 로고
    • DNA loop repair by human cell extracts
    • Umar, A., Boyer, J. C., and Kunkel, T. A. (1994) DNA loop repair by human cell extracts Science 266, 814-816 (Pubitemid 24359292)
    • (1994) Science , vol.266 , Issue.5186 , pp. 814-816
    • Umar, A.1    Boyer, J.C.2    Kunkel, T.A.3
  • 19
    • 0026032501 scopus 로고
    • Stability and structure of three-way DNA junctions containing unpaired nucleotides
    • Leontis, N. B., Kwok, W., and Newman, J. S. (1991) Stability and structure of three-way DNA junctions containing unpaired nucleotides Nucleic Acids Res. 19, 759-766 (Pubitemid 21913148)
    • (1991) Nucleic Acids Research , vol.19 , Issue.4 , pp. 759-766
    • Leontis, N.B.1    Kwok, W.2    Newman, J.S.3
  • 20
    • 0034388126 scopus 로고    scopus 로고
    • Solution structure of a DNA three-way junction containing two unpaired thymidine bases. Identification of sequence features that decide conformer selection
    • van Buuren, B. N., Overmars, F. J., Ippel, J. H., Altona, C., and Wijmenga, S. S. (2000) Solution structure of a DNA three-way junction containing two unpaired thymidine bases. Identification of sequence features that decide conformer selection J. Mol. Biol. 304, 371-383
    • (2000) J. Mol. Biol. , vol.304 , pp. 371-383
    • Van Buuren, B.N.1    Overmars, F.J.2    Ippel, J.H.3    Altona, C.4    Wijmenga, S.S.5
  • 21
    • 0024344098 scopus 로고
    • RNA-protein interactions in 30S ribosomal subunits: Folding and function of 16S rRNA
    • Stern, S., Powers, T., Changchien, L. M., and Noller, H. F. (1989) RNA-protein interactions in 30S ribosomal subunits: Folding and function of 16S rRNA Science 244, 783-790 (Pubitemid 19164701)
    • (1989) Science , vol.244 , Issue.4906 , pp. 783-790
    • Stern, S.1    Powers, T.2    Changchien, L.-M.3    Noller, H.F.4
  • 24
    • 57449116795 scopus 로고    scopus 로고
    • DNA energy landscapes via calorimetric detection of microstate ensembles of metastable macrostates and triplet repeat diseases
    • Volker, J., Klump, H. H., and Breslauer, K. J. (2008) DNA energy landscapes via calorimetric detection of microstate ensembles of metastable macrostates and triplet repeat diseases Proc. Natl. Acad. Sci. U.S.A. 105, 18326-18330
    • (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , pp. 18326-18330
    • Volker, J.1    Klump, H.H.2    Breslauer, K.J.3
  • 25
    • 2942683101 scopus 로고    scopus 로고
    • Global structure of a DNA three-way junction by solution NMR: Towards prediction of 3H fold
    • DOI 10.1093/nar/gkh645
    • Wu, B., Girard, F., van Buuren, B., Schleucher, J., Tessari, M., and Wijmenga, S. (2004) Global structure of a DNA three-way junction by solution NMR: Towards prediction of 3H fold Nucleic Acids Res. 32, 3228-3239 (Pubitemid 39028861)
    • (2004) Nucleic Acids Research , vol.32 , Issue.10 , pp. 3228-3239
    • Wu, B.1    Girard, F.2    Van Buuren, B.3    Schleucher, J.4    Tessari, M.5    Wijmenga, S.6
  • 27
    • 0026569275 scopus 로고
    • Specific binding of chromosomal protein HMG1 to DNA damaged by the anticancer drug cisplatin
    • Pil, P. M. and Lippard, S. J. (1992) Specific binding of chromosomal protein HMG1 to DNA damaged by the anticancer drug cisplatin Science 256, 234-237
    • (1992) Science , vol.256 , pp. 234-237
    • Pil, P.M.1    Lippard, S.J.2
  • 28
    • 0024584528 scopus 로고
    • Specific recognition of cruciform DNA by nuclear protein HMGl
    • Bianchi, M. E., Beltrame, M., and Paonessa, G. (1989) Specific recognition of cruciform DNA by nuclear protein HMG1 Science 243, 1056-1059 (Pubitemid 19072581)
    • (1989) Science , vol.243 , Issue.4894 , pp. 1056-1059
    • Bianchi, M.E.1    Beltrame, M.2    Paonessa, G.3
  • 29
    • 0028278444 scopus 로고
    • Association of poly(CA)·poly(TG) DNA fragments into four-stranded complexes bound by HMG1 and 2
    • Gaillard, C. and Strauss, F. (1994) Association of poly(CA) ·poly(TG) DNA fragments into four-stranded complexes bound by HMG1 and 2 Science 264, 433-436 (Pubitemid 24178908)
    • (1994) Science , vol.264 , Issue.5157 , pp. 433-436
    • Gaillard, C.1    Strauss, F.2
  • 30
    • 0037059761 scopus 로고    scopus 로고
    • Protein kinase CK2 differentially phosphorylates maize chromosomal high mobility group B (HMGB) proteins modulating their stability and DNA interactions
    • DOI 10.1074/jbc.M109503200
    • Stemmer, C., Schwander, A., Bauw, G., Fojan, P., and Grasser, K. D. (2002) Protein kinase CK2 differentially phosphorylates maize chromosomal high mobility group B (HMGB) proteins modulating their stability and DNA interactions J. Biol. Chem. 277, 1092-1098 (Pubitemid 34968855)
    • (2002) Journal of Biological Chemistry , vol.277 , Issue.2 , pp. 1092-1098
    • Stemmer, C.1    Schwander, A.2    Bauw, G.3    Fojan, P.4    Grasser, K.D.5
  • 31
    • 33745671288 scopus 로고    scopus 로고
    • Mismatch Repair Factor MSH2-MSH3 Binds and Alters the Conformation of Branched DNA Structures Predicted to form During Genetic Recombination
    • DOI 10.1016/j.jmb.2006.05.032, PII S0022283606006140
    • Surtees, J. A. and Alani, E. (2006) Mismatch repair factor MSH2-MSH3 binds and alters the conformation of branched DNA structures predicted to form during genetic recombination J. Mol. Biol. 360, 523-536 (Pubitemid 43975113)
    • (2006) Journal of Molecular Biology , vol.360 , Issue.3 , pp. 523-536
    • Surtees, J.A.1    Alani, E.2
  • 32
    • 79960343567 scopus 로고    scopus 로고
    • Regulation of endonuclease activity in human nucleotide excision repair
    • Fagbemi, A. F., Orelli, B., and Scharer, O. D. (2011) Regulation of endonuclease activity in human nucleotide excision repair DNA Repair 10, 722-729
    • (2011) DNA Repair , vol.10 , pp. 722-729
    • Fagbemi, A.F.1    Orelli, B.2    Scharer, O.D.3
  • 33
    • 50649090679 scopus 로고    scopus 로고
    • Analysis of branched nucleic acid structure using comparative gel electrophoresis
    • Lilley, D. M. (2008) Analysis of branched nucleic acid structure using comparative gel electrophoresis Q. Rev. Biophys. 41, 1-39
    • (2008) Q. Rev. Biophys. , vol.41 , pp. 1-39
    • Lilley, D.M.1
  • 36
    • 0025340001 scopus 로고
    • Strand-specific mismatch correction in nuclear extracts of human and Drosophila melanogaster cell lines
    • Holmes, J., Jr., Clark, S., and Modrich, P. (1990) Strand-specific mismatch correction in nuclear extracts of human and Drosophila melanogaster cell lines Proc. Natl. Acad. Sci. U.S.A. 87, 5837-5841
    • (1990) Proc. Natl. Acad. Sci. U.S.A. , vol.87 , pp. 5837-5841
    • Holmes Jr., J.1    Clark, S.2    Modrich, P.3
  • 38
    • 0034674476 scopus 로고    scopus 로고
    • Base stacking and even/odd behavior of hairpin loops in DNA triplet repeat slippage and expansion with DNA polymerase
    • Hartenstine, M. J., Goodman, M. F., and Petruska, J. (2000) Base stacking and even/odd behavior of hairpin loops in DNA triplet repeat slippage and expansion with DNA polymerase J. Biol. Chem. 275, 18382-18390 (Pubitemid 30414795)
    • (2000) Journal of Biological Chemistry , vol.275 , Issue.24 , pp. 18382-18390
    • Hartenstine, M.J.1    Goodman, M.F.2    Petruska, J.3
  • 39
    • 0032570797 scopus 로고    scopus 로고
    • Analysis of strand slippage in DNA polymerase expansions of CAG/CTG triplet repeats associated with neurodegenerative disease
    • DOI 10.1074/jbc.273.9.5204
    • Petruska, J., Hartenstine, M. J., and Goodman, M. F. (1998) Analysis of strand slippage in DNA polymerase expansions of CAG/CTG triplet repeats associated with neurodegenerative disease J. Biol. Chem. 273, 5204-5210 (Pubitemid 28108683)
    • (1998) Journal of Biological Chemistry , vol.273 , Issue.9 , pp. 5204-5210
    • Petruska, J.1    Hartenstine, M.J.2    Goodman, M.F.3
  • 40
    • 64849099452 scopus 로고    scopus 로고
    • Structural studies of a trinucleotide repeat sequence using 2-aminopurine
    • Degtyareva, N. N., Reddish, M. J., Sengupta, B., and Petty, J. T. (2009) Structural studies of a trinucleotide repeat sequence using 2-aminopurine Biochemistry 48, 2340-2346
    • (2009) Biochemistry , vol.48 , pp. 2340-2346
    • Degtyareva, N.N.1    Reddish, M.J.2    Sengupta, B.3    Petty, J.T.4
  • 41
    • 77950677495 scopus 로고    scopus 로고
    • Context dependence of trinucleotide repeat structures
    • Degtyareva, N. N., Barber, C. A., Sengupta, B., and Petty, J. T. (2010) Context dependence of trinucleotide repeat structures Biochemistry 49, 3024-3030
    • (2010) Biochemistry , vol.49 , pp. 3024-3030
    • Degtyareva, N.N.1    Barber, C.A.2    Sengupta, B.3    Petty, J.T.4
  • 42
    • 79952097563 scopus 로고    scopus 로고
    • Sequence length dictates repeated CAG folding in three-way junctions
    • Degtyareva, N. N., Barber, C. A., Reddish, M. J., and Petty, J. T. (2011) Sequence length dictates repeated CAG folding in three-way junctions Biochemistry 50, 458-465
    • (2011) Biochemistry , vol.50 , pp. 458-465
    • Degtyareva, N.N.1    Barber, C.A.2    Reddish, M.J.3    Petty, J.T.4
  • 44
    • 0029962991 scopus 로고    scopus 로고
    • NMR studies of DNA three-way junctions containing two unpaired thymidine bases: The influence of the sequence at the junction on the stability of the stacking conformers
    • DOI 10.1006/jmbi.1996.0057
    • Overmars, F. J., Pikkemaat, J. A., van den Elst, H., van Boom, J. H., and Altona, C. (1996) NMR studies of DNA three-way junctions containing two unpaired thymidine bases: The influence of the sequence at the junction on the stability of the stacking conformers J. Mol. Biol. 255, 702-713 (Pubitemid 26105579)
    • (1996) Journal of Molecular Biology , vol.255 , Issue.5 , pp. 702-713
    • Overmars, F.J.J.1    Pikkemaat, J.A.2    Van Den Elst, H.D.3    Van Boom, J.H.4    Altona, C.5
  • 45
    • 0033636685 scopus 로고    scopus 로고
    • Structures of helical junctions in nucleic acids
    • Lilley, D. M. (2000) Structures of helical junctions in nucleic acids Q. Rev. Biophys. 33, 109-159
    • (2000) Q. Rev. Biophys. , vol.33 , pp. 109-159
    • Lilley, D.M.1
  • 46
    • 0025248057 scopus 로고
    • The three-way DNA junction is a Y-shaped molecule in which there is no helix-helix stacking
    • Duckett, D. R. and Lilley, D. M. (1990) The three-way DNA junction is a Y-shaped molecule in which there is no helix-helix stacking EMBO J. 9, 1659-1664
    • (1990) EMBO J. , vol.9 , pp. 1659-1664
    • Duckett, D.R.1    Lilley, D.M.2
  • 48
  • 49
    • 67649980004 scopus 로고    scopus 로고
    • Stabilization of three-way junctions of DNA under molecular crowding conditions
    • Muhuri, S., Mimura, K., Miyoshi, D., and Sugimoto, N. (2009) Stabilization of three-way junctions of DNA under molecular crowding conditions J. Am. Chem. Soc. 131, 9268-9280
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 9268-9280
    • Muhuri, S.1    Mimura, K.2    Miyoshi, D.3    Sugimoto, N.4
  • 50
    • 0021687639 scopus 로고
    • Different base/base mismatches are corrected with different efficiencies by the methyl-directed DNA mismatch-repair system of E. coli
    • Kramer, B., Kramer, W., and Fritz, H. J. (1984) Different base/base mismatches are corrected with different efficiencies by the methyl-directed DNA mismatch-repair system of E. coli Cell 38, 879-887 (Pubitemid 15176117)
    • (1984) Cell , vol.38 , Issue.3 , pp. 879-887
    • Kramer, B.1    Kramer, W.2    Fritz, H.-J.3
  • 51
    • 0037423360 scopus 로고    scopus 로고
    • Bi-directional processing of DNA loops by mismatch repair-dependent and -independent pathways in human cells
    • DOI 10.1074/jbc.M210687200
    • McCulloch, S. D., Gu, L., and Li, G. M. (2003) Bi-directional processing of DNA loops by mismatch repair-dependent and -independent pathways in human cells J. Biol. Chem. 278, 3891-3896 (Pubitemid 36801119)
    • (2003) Journal of Biological Chemistry , vol.278 , Issue.6 , pp. 3891-3896
    • McCulloch, S.D.1    Gu, L.2    Li, G.-M.3
  • 53
    • 0033548703 scopus 로고    scopus 로고
    • Repair of large insertion/deletion heterologies in human nuclear extracts is directed by a 5′ single-strand break and is independent of the mismatch repair system
    • Littman, S. J., Fang, W. H., and Modrich, P. (1999) Repair of large insertion/deletion heterologies in human nuclear extracts is directed by a 5′ single-strand break and is independent of the mismatch repair system J. Biol. Chem. 274, 7474-7481
    • (1999) J. Biol. Chem. , vol.274 , pp. 7474-7481
    • Littman, S.J.1    Fang, W.H.2    Modrich, P.3
  • 54
    • 0023140012 scopus 로고
    • Repair of a mismatch is influenced by the base composition of the surrounding nucleotide sequence
    • Jones, M., Wagner, R., and Radman, M. (1987) Repair of a mismatch is influenced by the base composition of the surrounding nucleotide sequence Genetics 115, 605-610 (Pubitemid 17050663)
    • (1987) Genetics , vol.115 , Issue.4 , pp. 605-610
    • Jones, M.1    Wagner, R.2    Radman, M.3
  • 55
    • 0142092698 scopus 로고    scopus 로고
    • Initiation of repair of A/G mismatches is modulated by sequence context
    • DOI 10.1016/S1568-7864(03)00067-3
    • Sanchez, A. M., Volk, D. E., Gorenstein, D. G., and Lloyd, R. S. (2003) Initiation of repair of A/G mismatches is modulated by sequence context DNA Repair 2, 863-878 (Pubitemid 37297451)
    • (2003) DNA Repair , vol.2 , Issue.8 , pp. 863-878
    • Sanchez, A.M.1    Volk, D.E.2    Gorenstein, D.G.3    Lloyd, R.S.4
  • 56
    • 0035824554 scopus 로고    scopus 로고
    • Asymmetric recognition of DNA local distortion. Structure-based functional studies of eukaryotic Msh2-Msh6
    • Drotschmann, K., Yang, W., Brownewell, F. E., Kool, E. T., and Kunkel, T. A. (2001) Asymmetric recognition of DNA local distortion. Structure-based functional studies of eukaryotic Msh2-Msh6 J. Biol. Chem. 276, 46225-46229
    • (2001) J. Biol. Chem. , vol.276 , pp. 46225-46229
    • Drotschmann, K.1    Yang, W.2    Brownewell, F.E.3    Kool, E.T.4    Kunkel, T.A.5
  • 57
    • 77953441990 scopus 로고    scopus 로고
    • Functional studies and homology modeling of Msh2-Msh3 predict that mispair recognition involves DNA bending and strand separation
    • Dowen, J. M., Putnam, C. D., and Kolodner, R. D. (2010) Functional studies and homology modeling of Msh2-Msh3 predict that mispair recognition involves DNA bending and strand separation Mol. Cell. Biol. 30, 3321-3328
    • (2010) Mol. Cell. Biol. , vol.30 , pp. 3321-3328
    • Dowen, J.M.1    Putnam, C.D.2    Kolodner, R.D.3
  • 58
    • 65249160271 scopus 로고    scopus 로고
    • A tale of tails: Insights into the coordination of 3′ end processing during homologous recombination
    • Lyndaker, A. M. and Alani, E. (2009) A tale of tails: Insights into the coordination of 3′ end processing during homologous recombination BioEssays 31, 315-321
    • (2009) BioEssays , vol.31 , pp. 315-321
    • Lyndaker, A.M.1    Alani, E.2
  • 59
    • 84855463183 scopus 로고    scopus 로고
    • Mechanism of mismatch recognition revealed by human MutSβ bound to unpaired DNA loops
    • Gupta, S., Gellert, M., and Yang, W. (2011) Mechanism of mismatch recognition revealed by human MutSβ bound to unpaired DNA loops Nat. Struct. Mol. Biol. 19, 72-78
    • (2011) Nat. Struct. Mol. Biol. , vol.19 , pp. 72-78
    • Gupta, S.1    Gellert, M.2    Yang, W.3
  • 60
    • 84859368160 scopus 로고    scopus 로고
    • Energy landscapes of dynamic ensembles of rolling triplet repeat bulge loops: Implications for DNA expansion associated with disease states
    • Volker, J., Gindikin, V., Klump, H. H., Plum, G. E., and Breslauer, K. J. (2012) Energy landscapes of dynamic ensembles of rolling triplet repeat bulge loops: Implications for DNA expansion associated with disease states J. Am. Chem. Soc. 134, 6033-6044
    • (2012) J. Am. Chem. Soc. , vol.134 , pp. 6033-6044
    • Volker, J.1    Gindikin, V.2    Klump, H.H.3    Plum, G.E.4    Breslauer, K.J.5
  • 61
    • 0030575840 scopus 로고    scopus 로고
    • Classification of nucleic acid junctions
    • DOI 10.1006/jmbi.1996.0599
    • Altona, C. (1996) Classification of nucleic acid junctions J. Mol. Biol. 263, 568-581 (Pubitemid 26382076)
    • (1996) Journal of Molecular Biology , vol.263 , Issue.4 , pp. 568-581
    • Altona, C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.