Metabolic aspects of epigenome: Coupling of S-adenosylmethionine synthesis and gene regulation on chromatin by SAMIT module

Sub-Cellular Biochemistry

Volumn 61, Issue , 2013, Pages 105-118

  Igarashi, Kazuhiko ^a   Katoh, Yasutake ^a  

^a TOHOKU UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

MAMMALIA;

DNA METHYLTRANSFERASE; HISTONE; METHIONINE ADENOSYLTRANSFERASE; S ADENOSYLMETHIONINE; TRANSCRIPTION FACTOR MAFK;

ANIMAL; BIOSYNTHESIS; CELL NUCLEUS; CHROMATIN; CHROMATIN ASSEMBLY AND DISASSEMBLY; DNA METHYLATION; ENZYMOLOGY; EPIGENETICS; GENE EXPRESSION REGULATION; GENETIC EPIGENESIS; GENETIC TRANSCRIPTION; HUMAN; METABOLISM; METHODOLOGY; REVIEW;

ANIMALS; CELL NUCLEUS; CHROMATIN; CHROMATIN ASSEMBLY AND DISASSEMBLY; DNA METHYLATION; DNA MODIFICATION METHYLASES; EPIGENESIS, GENETIC; EPIGENOMICS; GENE EXPRESSION REGULATION; HISTONES; HUMANS; MAFK TRANSCRIPTION FACTOR; METHIONINE ADENOSYLTRANSFERASE; S-ADENOSYLMETHIONINE; TRANSCRIPTION, GENETIC;

EID: 84873285079     PISSN: 03060225     EISSN: None     Source Type: Journal    
DOI: 10.1007/978-94-007-4525-4_5     Document Type: Article

References (38)

1. An S, Kumar R, Sheets ED, Benkovic SJ (2008) Reversible compartmentalization of de novo purine biosynthetic complexes in living cells. Science 320(5872): 103-106.
2. Attia RR, Gardner LA, Mahrous E, Taxman DJ, Legros L, Rowe S, Ting JP, Geller A, Kotb M (2008) Selective targeting of leukemic cell growth in vivo and in vitro using a gene silencing approach to diminish S-adenosylmethionine synthesis. J Biol Chem 283(45): 30788-30795.
3. Brown JM, Ball JG, Hogsett A, Williams T, Valentovic M (2010) Temporal study of acetaminophen (APAP) and S-adenosyl-L-methionine (SAMe) effects on subcellular hepatic SAMe levels and methionine adenosyltransferase (MAT) expression and activity. Toxicol Appl Pharmacol 247(1): 1-9.
4. Cantoni GL (1953) S-adenosylmethionine; a new intermediate formed enzymatically from L-methionine and adenosinetriphosphate. J Biol Chem 204: 403-416.
5. Cantoni GL (1975) Biological methylation: selected aspects. Annu Rev Biochem 44: 435-451.
6. Chiang PK, Cantoni GL (1977) Activation of methionine for transmethylation. Purification of the S-adenosylmethionine synthetase of bakers' yeast and its separation into two forms. J Biol Chem 252(13): 4506-4513.
7. Chiang PK, Gordon RK, Tal J, Zeng GC, Doctor BP, Pardhasaradhi K, McCann PP (1996) S-Adenosylmethionine and methylation. FASEB J 10(4): 471-480.
8. Chiba P, Wallner C, Kaiser E (1988) S-adenosylmethionine metabolism in HL-60 cells: effect of cell cycle and differentiation. Biochim Biophys Acta 971(1): 38-45.
9. Fernandez-Sanchez ME, Gonatopoulos-Pournatzis T, Preston G, Lawlor MA, Cowling VH (2009) S-adenosyl homocysteine hydrolase is required for Myc-induced mRNA cap methylation, protein synthesis, and cell proliferation. Mol Cell Biol 29(23): 6182-6191.
10. Fujiwara KT, Kataoka K, Nishizawa M (1993) Two new members of the maf oncogene family, mafK and mafF, encode nuclear b-Zip proteins lacking putative trans-activator domain. Oncogene 8(9): 2371-2380.
11. German DC, Bloch CA, Kredich NM (1983) Measurements of S-adenosylmethionine and L-homocysteine metabolism in cultured human lymphoid cells. J Biol Chem 258(18): 10997-11003.
12. Halim AB, LeGros L, Geller A, Kotb M (1999) Expression and functional interaction of the catalytic and regulatory subunits of human methionine adenosyltransferase in mammalian cells. J Biol Chem 274(42): 29720-29725.
13. Igarashi K, Sun J (2006) The heme-Bach1 pathway in the regulation of oxidative stress response and erythroid differentiation. Antioxid Redox Signal 8(1-2): 107-118.
14. Igarashi K, Kataoka K, Itoh K, Hayashi N, Nishizawa M, Yamamoto M (1994) Regulation of transcription by dimerization of erythroid factor NF-E2 p45 with small Maf proteins. Nature 367(6463): 568-572.
15. Katoh Y, Ikura T, Hoshikawa Y, Tashiro S, Ito T, Ohta M, Kera Y, Noda T, Igarashi K (2011) Methionine adenosyltransferase II serves as a transcriptional corepressor of Maf oncoprotein. Mol Cell 41(5): 554-566.
16. Kim T, Buratowski S (2009) Dimethylation of H3K4 by Set1 recruits the Set3 histone deacetylase complex to 5ʹ transcribed regions. Cell 137(2): 259-272.
17. Kotb M, Mudd SH, Mato JM, Geller AM, Kredich NM, Chou JY, Cantoni GL (1997) Consensus nomenclature for the mammalian methionine adenosyltransferase genes and gene products. Trends Genet 13(2): 51-52.
18. Lan F, Nottke AC, Shi Y (2008) Mechanisms involved in the regulation of histone lysine demethylases. Curr Opin Cell Biol 20(3): 316-325.
19. Larsson J, Rasmuson-Lestander A (1998) Somatic and germline clone analysis in mutants of the S-adenosylmethionine synthetase encoding gene in Drosophila melanogaster. FEBS Lett 427(1): 119-123.
20. Larsson J, Zhang J, Rasmuson-Lestander A (1996) Mutations in the Drosophila melanogaster gene encoding S-adenosylmethionine synthetase [corrected] suppress position-effect variegation. Genetics 143(2): 887-896.
21. LeGros HL Jr, Halim AB, Geller AM, Kotb M (2000) Cloning, expression, and functional characterization of the beta regulatory subunit of human methionine adenosyltransferase (MAT II). J Biol Chem 275(4): 2359-2366.
22. Malovannaya A, Lanz RB, Jung SY, Bulynko Y, Le NT, Chan DW, Ding C, Shi Y, Yucer N, Krenciute G et al (2011) Analysis of the human endogenous coregulator complexome. Cell 145(5): 787-799.
23. Markham GD, Pajares MA (2009) Structure-function relationships in methionine adenosyltransferases. Cell Mol Life Sci 66(4): 636-648.
24. Mato JM, Alvarez L, Ortiz P, Pajares MA (1997) S-adenosylmethionine synthesis: molecular mechanisms and clinical implications. Pharmacol Ther 73(3): 265-280.
25. Mitsui K, Teraoka H, Tsukada K (1988) Complete purification and immunochemical analysis of S-adenosylmethionine synthetase from bovine brain. J Biol Chem 263(23): 11211-11216.
26. Motohashi H, Yamamoto M (2007) Carcinogenesis and transcriptional regulation through Maf recognition elements. Cancer Sci 98(2): 135-139.
27. Niida H, Katsuno Y, Sengoku M, Shimada M, Yukawa M, Ikura M, Ikura T, Kohno K, Shima H, Suzuki H et al (2010) Essential role of Tip60-dependent recruitment of ribonucleotide reductase at DNA damage sites in DNA repair during G1 phase. Genes Dev 24(4): 333-338.
28. Person K (1976) Modification of the eye colour mutant zeste by suppressor, enhancer and minute genes in Drosophila melanogaster. Hereditas 82: 111-119.
29. Posnick LM, Samson LD (1999) Influence of S-adenosylmethionine pool size on spontaneous mutation, dam methylation, and cell growth of Escherichia coli. J Bacteriol 181(21): 6756-6762.
30. Radomski N, Kaufmann C, Dreyer C (1999) Nuclear accumulation of S-adenosylhomocysteine hydrolase in transcriptionally active cells during development of Xenopus laevis. Mol Biol Cell 10(12): 4283-4298.
31. Reytor E, Perez-Miguelsanz J, Alvarez L, Perez-Sala D, Pajares MA (2009) Conformational signals in the C-terminal domain of methionine adenosyltransferase I/III determine its nucleocytoplasmic distribution. FASEB J 23(10): 3347-3360.
32. Rydberg B, Lindahl T (1982) Nonenzymatic methylation of DNA by the intracellular methyl group donor S-adenosyl-L-methionine is a potentially mutagenic reaction. EMBO J 1: 211-216.
33. Sakata SF, Shelly LL, Ruppert S, Schutz G, Chou JY (1993) Cloning and expression of murine S-adenosylmethionine synthetase. J Biol Chem 268(19): 13978-13986.
34. Suma Y, Yamanaka Y, Tsukada K (1983) Synthesis of S-adenosylmethionine synthetase isozymes from rat and mouse livers. Immunochemical studies. Biochim Biophys Acta 755(2): 287-292.
35. Takahashi H, McCaffery JM, Irizarry RA, Boeke JD (2006) Nucleocytosolic acetyl-coenzyme a synthetase is required for histone acetylation and global transcription. Mol Cell 23(2): 207-217.
36. Wellen KE, Hatzivassiliou G, Sachdeva UM, Bui TV, Cross JR, Thompson CB (2009) ATP-citrate lyase links cellular metabolism to histone acetylation. Science 324(5930): 1076-1080.
37. Wu SC, Zhang Y (2010) Active DNA demethylation: many roads lead to Rome. Nat Rev Mol Cell Biol 11: 607-620.
38. Xia M, Chen Y, Wang LC, Zandi E, Yang H, Bemanian S, Martinez-Chantar ML, Mato JM, Lu SC (2010) Novel function and intracellular localization of methionine adenosyltransferase 2beta splicing variants. J Biol Chem 285(26): 20015-20021.