메뉴 건너뛰기




Volumn 14, Issue 1, 2013, Pages

Extensive genomic characterization of a set of near-isogenic lines for heterotic QTL in maize (Zea mays L.)

Author keywords

Genome wide genotyping; Heterosis; Linkage drag; Maize; Near isogenic lines; Single nucleotide polymorphism

Indexed keywords

ALLELE; ARTICLE; CONTROLLED STUDY; GENE LOCATION; GENE SEGREGATION; GENETIC ASSOCIATION; GENETIC ENGINEERING; GENETIC LINKAGE; GENOME ANALYSIS; GENOTYPE; HETEROSIS; INTROGRESSION; MAIZE; NEAR ISOGENIC LINE; NONHUMAN; PLANT GENOME; QUANTITATIVE TRAIT LOCUS; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 84872933238     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-14-61     Document Type: Article
Times cited : (15)

References (38)
  • 2
    • 34548395815 scopus 로고    scopus 로고
    • Towards the molecular basis of heterosis
    • 10.1016/j.tplants.2007.08.005, 17720610
    • Hochholdinger F, Hoecker N. Towards the molecular basis of heterosis. Trends Plant Sci 2007, 12:427-432. 10.1016/j.tplants.2007.08.005, 17720610.
    • (2007) Trends Plant Sci , vol.12 , pp. 427-432
    • Hochholdinger, F.1    Hoecker, N.2
  • 3
    • 33846543858 scopus 로고    scopus 로고
    • Heterosis: revisiting the magic
    • 10.1016/j.tig.2006.12.006, 17188398
    • Lippman ZB, Zamir D. Heterosis: revisiting the magic. Trends Genet 2007, 23:60-66. 10.1016/j.tig.2006.12.006, 17188398.
    • (2007) Trends Genet , vol.23 , pp. 60-66
    • Lippman, Z.B.1    Zamir, D.2
  • 4
    • 34548587365 scopus 로고    scopus 로고
    • Classical genetic and quantitative trait loci analyses of heterosis in a maize hybrid between two elite inbred lines
    • 10.1534/genetics.106.064493, 1893040, 17339211
    • Frascaroli E, Canè MA, Landi P, Pea G, Gianfranceschi L, Villa M, Morgante M, Pè ME. Classical genetic and quantitative trait loci analyses of heterosis in a maize hybrid between two elite inbred lines. Genetics 2007, 176:625-644. 10.1534/genetics.106.064493, 1893040, 17339211.
    • (2007) Genetics , vol.176 , pp. 625-644
    • Frascaroli, E.1    Canè, M.A.2    Landi, P.3    Pea, G.4    Gianfranceschi, L.5    Villa, M.6    Morgante, M.7    Pè, M.E.8
  • 5
    • 0041975060 scopus 로고    scopus 로고
    • Genetic basis of heterosis explored by simple sequence repeat markers in a random-mated maize population
    • 10.1007/s00122-003-1271-7, 12759730
    • Lu H, Romero-Severson J, Bernardo R. Genetic basis of heterosis explored by simple sequence repeat markers in a random-mated maize population. Theor Appl Genet 2003, 107:494-502. 10.1007/s00122-003-1271-7, 12759730.
    • (2003) Theor Appl Genet , vol.107 , pp. 494-502
    • Lu, H.1    Romero-Severson, J.2    Bernardo, R.3
  • 6
    • 0026670272 scopus 로고
    • Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers
    • 1205218, 1468633
    • Stuber CW, Lincoln SE, Wolff DW, Helentjaris T, Lander ES. Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers. Genetics 1992, 132:823-839. 1205218, 1468633.
    • (1992) Genetics , vol.132 , pp. 823-839
    • Stuber, C.W.1    Lincoln, S.E.2    Wolff, D.W.3    Helentjaris, T.4    Lander, E.S.5
  • 7
    • 0038235211 scopus 로고    scopus 로고
    • Heterosis for biomass yield and related traits in five hybrids of Arabidopsis thaliana L
    • Barth S, Busimi AK, Friedrich Utz H, Melchinger AE. Heterosis for biomass yield and related traits in five hybrids of Arabidopsis thaliana L. Heynh Heredity 2003, 91:36-42.
    • (2003) Heynh Heredity , vol.91 , pp. 36-42
    • Barth, S.1    Busimi, A.K.2    Friedrich Utz, H.3    Melchinger, A.E.4
  • 8
    • 35349011689 scopus 로고    scopus 로고
    • Progress in research and development on hybrid rice: a super-domesticate in China
    • 10.1093/aob/mcm121, 2759200, 17704538
    • Cheng S-H, Zhuang J-Y, Fan Y-Y, Du J-H, Cao L-Y. Progress in research and development on hybrid rice: a super-domesticate in China. Ann Bot 2007, 100:959-966. 10.1093/aob/mcm121, 2759200, 17704538.
    • (2007) Ann Bot , vol.100 , pp. 959-966
    • Cheng, S.-H.1    Zhuang, J.-Y.2    Fan, Y.-Y.3    Du, J.-H.4    Cao, L.-Y.5
  • 9
    • 0037418206 scopus 로고    scopus 로고
    • Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid
    • 10.1073/pnas.0437907100, 151382, 12604771
    • Hua J, Xing Y, Wu W, Xu C, Sun X, Yu S, Zhang Q. Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid. Proc Natl Acad Sci USA 2003, 100:2574-2579. 10.1073/pnas.0437907100, 151382, 12604771.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 2574-2579
    • Hua, J.1    Xing, Y.2    Wu, W.3    Xu, C.4    Sun, X.5    Yu, S.6    Zhang, Q.7
  • 10
    • 37249047891 scopus 로고    scopus 로고
    • Heterosis for biomass-related traits in Arabidopsis investigated by quantitative trait loci analysis of the triple testcross design with recombinant inbred lines
    • 10.1534/genetics.107.077628, 2147944, 18039885
    • Kusterer B, Piepho HP, Utz HF, Schon CC, Muminovic J, Meyer RC, Altmann T, Melchinger AE. Heterosis for biomass-related traits in Arabidopsis investigated by quantitative trait loci analysis of the triple testcross design with recombinant inbred lines. Genetics 2007, 177:1839-1850. 10.1534/genetics.107.077628, 2147944, 18039885.
    • (2007) Genetics , vol.177 , pp. 1839-1850
    • Kusterer, B.1    Piepho, H.P.2    Utz, H.F.3    Schon, C.C.4    Muminovic, J.5    Meyer, R.C.6    Altmann, T.7    Melchinger, A.E.8
  • 11
  • 12
    • 0034845083 scopus 로고    scopus 로고
    • Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. II. Grain yield components
    • 1461757, 11514460
    • Luo LJ, Li ZK, Mei HW, Shu QY, Tabien R, Zhong DB. Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. II. Grain yield components. Genetics 2001, 158:1755-1771. 1461757, 11514460.
    • (2001) Genetics , vol.158 , pp. 1755-1771
    • Luo, L.J.1    Li, Z.K.2    Mei, H.W.3    Shu, Q.Y.4    Tabien, R.5    Zhong, D.B.6
  • 13
    • 37249074279 scopus 로고    scopus 로고
    • Genetic basis of heterosis for growth-related traits in Arabidopsis investigated by testcross progenies of near-isogenic lines reveals a significant role of epistasis
    • 10.1534/genetics.107.080564, 2147963, 18039884
    • Melchinger AE, Piepho HP, Utz HF, Muminovic J, Wegenast T, Torjek O, Altmann T, Kusterer B. Genetic basis of heterosis for growth-related traits in Arabidopsis investigated by testcross progenies of near-isogenic lines reveals a significant role of epistasis. Genetics 2007, 177:1827-1837. 10.1534/genetics.107.080564, 2147963, 18039884.
    • (2007) Genetics , vol.177 , pp. 1827-1837
    • Melchinger, A.E.1    Piepho, H.P.2    Utz, H.F.3    Muminovic, J.4    Wegenast, T.5    Torjek, O.6    Altmann, T.7    Kusterer, B.8
  • 14
    • 1942533595 scopus 로고    scopus 로고
    • Heterosis of biomass production in Arabidopsis, Establishment during early development
    • 10.1104/pp.103.033001, 419853, 15064384
    • Meyer RC, Torjek O, Becher M, Altmann T. Heterosis of biomass production in Arabidopsis, Establishment during early development. Plant Physiol 2004, 134:1813-1823. 10.1104/pp.103.033001, 419853, 15064384.
    • (2004) Plant Physiol , vol.134 , pp. 1813-1823
    • Meyer, R.C.1    Torjek, O.2    Becher, M.3    Altmann, T.4
  • 16
    • 15544371510 scopus 로고    scopus 로고
    • Molecular marker genotypes, heterozygosity and genetic interactions explain heterosis in Arabidopsis thaliana
    • 10.1038/sj.hdy.6800558, 2041864, 15316557
    • Syed NH, Chen ZJ. Molecular marker genotypes, heterozygosity and genetic interactions explain heterosis in Arabidopsis thaliana. Heredity 2005, 94:295-304. 10.1038/sj.hdy.6800558, 2041864, 15316557.
    • (2005) Heredity , vol.94 , pp. 295-304
    • Syed, N.H.1    Chen, Z.J.2
  • 17
    • 0029035408 scopus 로고
    • Dominance is the major genetic basis of heterosis in rice as revealed by QTL analysis using molecular markers
    • 1206649, 7498751
    • Xiao J, Li J, Yuan L, Tanksley SD. Dominance is the major genetic basis of heterosis in rice as revealed by QTL analysis using molecular markers. Genetics 1995, 140:745-754. 1206649, 7498751.
    • (1995) Genetics , vol.140 , pp. 745-754
    • Xiao, J.1    Li, J.2    Yuan, L.3    Tanksley, S.D.4
  • 18
    • 0030829363 scopus 로고    scopus 로고
    • Importance of epistasis as the genetic basis of heterosis in an elite rice hybrid
    • 10.1073/pnas.94.17.9226, 23127, 11038567
    • Yu SB, Li JX, Xu CG, Tan YF, Gao YJ, Li XH, Zhang Q, Maroof MA. Importance of epistasis as the genetic basis of heterosis in an elite rice hybrid. Proc Natl Acad Sci USA 1997, 94:9226-9231. 10.1073/pnas.94.17.9226, 23127, 11038567.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 9226-9231
    • Yu, S.B.1    Li, J.X.2    Xu, C.G.3    Tan, Y.F.4    Gao, Y.J.5    Li, X.H.6    Zhang, Q.7    Maroof, M.A.8
  • 20
    • 0027137273 scopus 로고
    • Use of near-isogenic lines derived by backcrossing or selfing to map qualitative traits
    • Kaeppler SM, Phillips RL, Kim TS. Use of near-isogenic lines derived by backcrossing or selfing to map qualitative traits. Theor Appl Genet 1993, 87:233-237.
    • (1993) Theor Appl Genet , vol.87 , pp. 233-237
    • Kaeppler, S.M.1    Phillips, R.L.2    Kim, T.S.3
  • 21
    • 0025228806 scopus 로고
    • Fine mapping of quantitative trait loci using selected overlapping recombinant chromosomes, in an interspecies cross of tomato
    • 1203964, 1968874
    • Paterson AH, DeVerna JW, Lanini B, Tanksley SD. Fine mapping of quantitative trait loci using selected overlapping recombinant chromosomes, in an interspecies cross of tomato. Genetics 1990, 124:735-742. 1203964, 1968874.
    • (1990) Genetics , vol.124 , pp. 735-742
    • Paterson, A.H.1    DeVerna, J.W.2    Lanini, B.3    Tanksley, S.D.4
  • 22
    • 0028846653 scopus 로고
    • An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL
    • 1206837, 8582620
    • Eshed Y, Zamir D. An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL. Genetics 1995, 141:1147-1162. 1206837, 8582620.
    • (1995) Genetics , vol.141 , pp. 1147-1162
    • Eshed, Y.1    Zamir, D.2
  • 23
    • 34247847700 scopus 로고    scopus 로고
    • QTL mapping with near-isogenic lines in maize
    • 10.1007/s00122-007-0512-6, 17308934
    • Szalma S, Hostert B, LeDeaux J, Stuber C, Holland J. QTL mapping with near-isogenic lines in maize. Theor Appl Genet 2007, 114:1211. 10.1007/s00122-007-0512-6, 17308934.
    • (2007) Theor Appl Genet , vol.114 , pp. 1211
    • Szalma, S.1    Hostert, B.2    LeDeaux, J.3    Stuber, C.4    Holland, J.5
  • 24
    • 78650893977 scopus 로고    scopus 로고
    • Genetic dissection of maize phenology using an intraspecific introgression library
    • 10.1186/1471-2229-11-4, 3025946, 21211047
    • Salvi S, Corneti S, Bellotti M, Carraro N, Sanguineti MC, Castelletti S, Tuberosa R. Genetic dissection of maize phenology using an intraspecific introgression library. BMC Plant Biol 2011, 11:4. 10.1186/1471-2229-11-4, 3025946, 21211047.
    • (2011) BMC Plant Biol , vol.11 , pp. 4
    • Salvi, S.1    Corneti, S.2    Bellotti, M.3    Carraro, N.4    Sanguineti, M.C.5    Castelletti, S.6    Tuberosa, R.7
  • 26
    • 84856060589 scopus 로고    scopus 로고
    • Characterization of heterotic quantitative trait loci in maize by evaluation of near-isogenic lines and their crosses at two competition levels
    • 10.1007/s00122-011-1685-6, 21953207
    • Frascaroli E, Canè MA, Pè ME, Pea G, Landi P. Characterization of heterotic quantitative trait loci in maize by evaluation of near-isogenic lines and their crosses at two competition levels. Theor Appl Genet 2012, 124:35-47. 10.1007/s00122-011-1685-6, 21953207.
    • (2012) Theor Appl Genet , vol.124 , pp. 35-47
    • Frascaroli, E.1    Canè, M.A.2    Pè, M.E.3    Pea, G.4    Landi, P.5
  • 29
    • 79955783956 scopus 로고    scopus 로고
    • A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species
    • 10.1371/journal.pone.0019379, 3087801, 21573248
    • Elshire RJ, Glaubitz JC, Sun Q, Poland JA, Kawamoto K, Buckler ES, Mitchell SE. A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species. PLoS One 2011, 6:e19379. 10.1371/journal.pone.0019379, 3087801, 21573248.
    • (2011) PLoS One , vol.6
    • Elshire, R.J.1    Glaubitz, J.C.2    Sun, Q.3    Poland, J.A.4    Kawamoto, K.5    Buckler, E.S.6    Mitchell, S.E.7
  • 33
    • 84871920095 scopus 로고    scopus 로고
    • Genetic diversity analysis of elite European maize (Zea mays L.) inbred lines using AFLP, SSR, and SNP markers reveals ascertainment bias for a subset of SNPs
    • Frascaroli E, Schrag TA, Melchinger AE. Genetic diversity analysis of elite European maize (Zea mays L.) inbred lines using AFLP, SSR, and SNP markers reveals ascertainment bias for a subset of SNPs. Theor Appl Genet 2012, 126:133-141.
    • (2012) Theor Appl Genet , vol.126 , pp. 133-141
    • Frascaroli, E.1    Schrag, T.A.2    Melchinger, A.E.3
  • 34
    • 77953128783 scopus 로고    scopus 로고
    • Population structure and genetic diversity in a commercial maize breeding program assessed with SSR and SNP markers
    • 10.1007/s00122-009-1256-2, 2854351, 20063144
    • Van Inghelandt D, Melchinger AE, Lebreton C, Stich B. Population structure and genetic diversity in a commercial maize breeding program assessed with SSR and SNP markers. Theor Appl Genet 2010, 120:1289-1299. 10.1007/s00122-009-1256-2, 2854351, 20063144.
    • (2010) Theor Appl Genet , vol.120 , pp. 1289-1299
    • Van Inghelandt, D.1    Melchinger, A.E.2    Lebreton, C.3    Stich, B.4
  • 35
    • 0000922699 scopus 로고
    • Diversity and relationships among U.S. maize inbreds revealed by restriction-fragment-length-polymorphisms
    • Melchinger AE, Messmer MM, Lee M, Woodman WL, Lamkey KL. Diversity and relationships among U.S. maize inbreds revealed by restriction-fragment-length-polymorphisms. Crop Sci 1991, 31:669-678.
    • (1991) Crop Sci , vol.31 , pp. 669-678
    • Melchinger, A.E.1    Messmer, M.M.2    Lee, M.3    Woodman, W.L.4    Lamkey, K.L.5
  • 36
    • 0344809963 scopus 로고    scopus 로고
    • Genetic analysis of drought tolerance in maize by molecular markers, I. Yield components
    • Frova C, Krajewski P, di Fonzo N, Villa M, Sari-Gorla M. Genetic analysis of drought tolerance in maize by molecular markers, I. Yield components. Theor Appl Genet 1999, 99:280-288.
    • (1999) Theor Appl Genet , vol.99 , pp. 280-288
    • Frova, C.1    Krajewski, P.2    di Fonzo, N.3    Villa, M.4    Sari-Gorla, M.5
  • 38
    • 0001677717 scopus 로고
    • Controlling the False Discovery Rate: a practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. Controlling the False Discovery Rate: a practical and powerful approach to multiple testing. J R Stat Soc Ser B Stat Method 1995, 57:289-300.
    • (1995) J R Stat Soc Ser B Stat Method , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.