Bacteriophages and phage-encoded proteins: Prospects in food quality and safety

Natural Antimicrobials in Food Safety and Quality

Volumn , Issue , 2011, Pages 10-26

  García, Pilar ^a   Martínez, Beatriz ^a   Rodríguez, Lorena ^a   Rodríguez, Ana ^a  

^a DEPARTMENT OF MICROBIOLOGY AND BIOCHEMISTRY OF DAIRY PRODUCTS   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84872859725     PISSN: None     EISSN: None     Source Type: Book    
DOI: None     Document Type: Chapter

References (91)

1. Abedon, S.T. (2009) Phage evolution and ecology. Advances in Applied Microbiology 67, 1-45.
2. Abuladze, T., Li, M., Menetrez, M.Y., Dean, T., Senecal, A. and Sulakvelidze, A. (2008) Bacteriophages reduce experimental contamination of hard surfaces, tomato, spinach, broccoli, and ground beef by Escherichia coli O157:H7. Applied and Environmental Microbiology 74, 6230-6238.
3. Ackerman, H.W. (1998) Tailed bacteriophages: the Caudovirales. Advances in Virus Research 51, 135-201.
4. Ackerman, H.W. (2007) 5500 Phages examined in the electron microscope. Archives of Virology 152, 227-243.
5. Atterbury, R.J. (2009) Bacteriophage biocontrol in animals and meat products. Microbial Biotechnology doi :10.1111/j.1751-7915.2009.00089.
6. Azeredo, J. and Sutherland, I. (2008) The use of phages for the removal of infectious biofilms. Current Pharmaceutical Biotechnology 9, 261-266.
7. Bigwood, T., Hudson, J.A. and Billington, C. (2009) Influence of host and bacteriophage concentrations on the inactivation of food-borne pathogenic bacteria by two phages. FEMS Microbiology Letters 291, 59-64.
8. Borysowski, J., Weber-Dabrowska, B. and Górski, A. (2006) Bacteriophage endolysins as a novel class of antibacterial agents. Experimental Biology and Medicine 231, 366-377.
9. Boulanger, P., Jacquot, P., Plançon, L., Chami, M., Engel, A., Parquet, C., Herbeuval, C. and Letellier, L. (2008) Phage T5 straight tail fiber is a multifunctional protein acting as a tape measure and carrying fusogenic and muralytic activities. Journal of Biological Chemistry 283, 13556-13564.
10. Boyd, E.F. and Brüssow, H. (2002) Common themes among bacteriophage-encoded virulence factors and diversity among the bacteriophages involved. Trends in Microbiology 10, 521-529.
11. Brüssow, H., Canchaya, C. and Hardt, W.D. (2004) Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion. Microbiology and Molecular Biology Reviews 68, 560-602.
12. Bruttin, A. and Brüssow, H. (2005) Human volunteers receiving Escherichia coli phage T4 orally: a safety test of phage therapy. Antimicrobial Agents and Chemotherapy 49, 2874-2878.
13. Cairns, B.J., Timms, A.R., Jansen, V.A., Connerton, I.F. and Payne, R.J. (2009) Quantitative models of in vitro bacteriophage-host dynamics and their application to phage therapy. PLoS Pathogens 5(1), e1000253.
14. Carlton, R.M., Noordman, W.H., Biswas, B., de Meester, E.D. and Loessner, M.J. (2005) Bacteriophage P100 for control of Listeria monocytogenes in foods: Genome sequence, bioinformatic analyses, oral toxicity study, and application. Regulatory Toxicology and Pharmacology 43, 301-312.
15. Chen, J. and Novick, R.P. (2009) Phage-mediated intergeneric transfer of toxin genes. Science 323, 139-141.
16. Chibani-Chennoufi, S., Bruttin, A., Dillmann, M.L. and Brüssow, H. (2004) Phage-host interaction: an ecological perspective. Journal of Bacteriology 186, 3677-3686.
17. Corbitt, A.J., Bennion, N. and Forsythe, S.J. (2000) Adenylate kinase amplification of ATP bioluminescence for hygiene monitoring in the food and beverage industry. Letters in Applied Microbiology 30, 443-447.
18. Denou, E., Bruttin, A., Barretto, C., Ngom-Bru, C., Brüssow, H. and Zuber, S. (2009) T4 phages against Escherichia coli diarrhea: potential and problems. Virology 388, 21-30.
19. d'Herelle, F. (1917) Sur un microbe invisible antagoniste des bacilles dysentériques. Comptes Rendus l'Academie des Sciences Paris 165, 373-375.
20. Donovan, D.M. and Foster-Frey, J. (2008) LambdaSa2prophage endolysin requires Cpl-7-binding domains and amidase-5 domain for antimicrobial lysis of streptococci. FEMS Microbiology Letters 287, 22-33.
21. Donovan, D.M., Lardeo, M. and Foster-Frey, J. (2006a) Lysis of staphylococcal mastitis pathogens by bacteriophage phi11 endolysin. FEMS Microbiology Letters 265, 133-139.
22. Donovan, D.M., Dong, S., Garrett, W., Rousseau, G.M., Moineau, S. and Pritchard, D.G. (2006b) Peptidoglycan hydrolase fusions maintain their parental specificities. Applied and Environmental Microbiology 72, 2988-2996.
23. Donovan, D.M., Foster-Frey, J., Dong, S., Rousseau, G.M., Moineau, S. and Pritchard, D.G. (2006c) The cell lysis activity of the Streptococcus agalactiae bacteriophage B30 endolysin relies on the cysteine, histidine-dependent amidohydrolase/peptidase domain. Applied and Environmental Microbiology 72, 5108-5112.
24. Dusthackeer, A., Hassan, V.N. and Kumar, V. (2008) Tape measure protein having MT3 motif facilitates phage entry into stationary phase cells of Mycobacterium tuberculosis. Computational Biology and Chemistry 32, 367-369.
25. EFSA (2009) Scientific Opinion of the Panel on Biological Hazards on a request from European Commission on the use and mode of action of bacteriophages in food production. EFSA Journal 1076, 1-26.
26. Fischetti, V.A. (2005) Bacteriophage lytic enzymes: novel anti-infectives. Trends in Microbiology 13, 491-496.
27. Fujinami, Y., Hirai, Y., Sakai, I., Yoshino, M. and Yasuda, J. (2007) Sensitive detection of Bacillus anthracis using a binding protein originating from gamma-phage. Microbiology and Immunology 51, 163-169.
28. Funatsu, T., Taniyama, T., Tajima, T., Tadakuma, H. and Namiki, H. (2002) Rapid and sensitive detection method of a bacterium by using a GFP reporter phage. Microbiology and Immunology 46, 365-369.
29. Gaeng, S., Scherer, S., Neve, H. and Loessner, M.J. (2000) Gene cloning and expression and secretion of Listeria monocytogenes bacteriophage-lytic enzymes in Lactococcus lactis. Applied and Environmental Microbiology 66, 2951-2958.
30. García, P., Madera, C., Martínez, B. and Rodríguez, A. (2007) Biocontrol of Staphylococcus aureus in curd manufacturing processes using bacteriophages. International Dairy Journal 17, 1232-1239.
31. García, P., Madera, C., Martínez, B., Rodríguez, A. and Suárez, J.E. (2009) Prevalence of bacteriophages infecting Staphylococcus aureus in dairy samples and their potential as biocontrol agents. Journal of Dairy Science 92, 3019-3026.
32. Gill, J.J., Pacan, J.C., Carson, M.E., Leslie, K.E., Griffiths, M.W. and Sabour, P.M. (2006) Efficacy and pharmacokinetics of bacteriophage therapy in treatment of subclinical Staphylococcus aureus mastitis in lactating dairy cattle. Antimicrobial Agents and Chemotherapy 50, 2912-2918.
33. Goodridge, L., Chen, J. and Griffiths, M. (1999) Development and characterization of a fluorescentbacteriophage assay for detection of Escherichia coli O157:H7. Applied and Environmental Microbiology 65, 1397-1404.
34. Greer, G.G. (2005) Bacteriophage control of foodborne bacteria. Journal of Food Protection 68, 1102-1111.
35. Greer, G.G. and Dilts, B.D. (2002) Control of Brochothrix thermosphacta spoilage of pork adipose tissue using bacteriophages. Journal of Food Protection 65, 861-863.
36. Guenther, S., Huwyler, D., Richard, S. and Loessner, M.J. (2009) Virulent bacteriophage for efficient biocontrol of Listeria monocytogenes in ready-to-eat foods. Applied and Environmental Microbiology 75, 93-100.
37. Hagens, S. and Loessner, M.J. (2007) Application of bacteriophages for detection and control of foodborne pathogens. Applied Microbiology and Biotechnology 76, 513-519.
38. Hendrix, R.W., Lawrence, J.G., Hatfull, G.F. and Casjens, S. (2000) The origins and ongoing evolution of viruses. Trends in Microbiology 8, 504-508.
39. Hudson, J.A., Billington, C., Carey-Smith, C. and Greening, G. (2005) Bacteriophages as biocontrol agents in food. Journal of Food Protection. 68, 426-437.
40. Johnson, R.P., Gyles, C.L., Huff, W.E., Ojha, S., Huff, G.R., Rath, N.C. and Donoghue, A.M. (2008) Bacteriophages for prophylaxis and therapy in cattle, poultry and pigs. Animal Health Research Reviews 9, 201-215.
41. Kakikawa, M., Yokoi, K.J., Kimoto, H., Nakano, M., Kawasaki, K., Taketo, A. and Kodaira, K. (2002) Molecular analysis of the lysis protein Lys encoded by Lactobacillus plantarum phage ?g1e. Gene 299, 227-234.
42. Kim, K.P., Klumpp, J. and Loessner, M.J. (2007) Enterobacter sakazakii bacteriophages can prevent bacterial growth in reconstituted infant formula. International Journal of Food Microbiology 115, 195-203.
43. Kocharunchitt, C., Ross, T. and McNeil, D.L. (2009) Use of bacteriophages as biocontrol agents to control Salmonella associated with seed sprouts. International Journal of Food Microbiology 128, 453-459.
44. Kodikara, C.P., Crew, H.H. and Stewart, G.S. (1991) Near on-line detection of enteric bacteria using lux recombinant bacteriophage. FEMS Microbiology Letters 67, 261-265.
45. Kretzer, J.W., Lehmann, R., Schmelcher, M., Banz, M., Kim, K., Korn, C. and Loessner, M.J. (2007) Use of high-affinity cell wall-binding domains of bacteriophage endolysins for immobilization and separation of bacterial cells. Applied and Environmental Microbiology 73, 1992-2000.
46. Lavigne, R., Seto, D., Mahadevan, P., Ackermann, H.W. and Kropinski, A.M. (2008) Unifying classical and molecular taxonomic classification: analysis of the Podoviridae using BLASTP-based tools. Research in Microbiology 159, 406-414.
47. Leverentz, B., Conway, W.S., Alavidze, Z., Janisiewicz, W.J., Fuchs, Y., Camp, M.J., Chighladze, E. and Sulakvelidze, A. (2001) Examination of bacteriophage as a biocontrol method for Salmonella on fresh-cut fruit: a model study. Journal of Food Protection 64, 1116-1121.
48. Loeffler J.M. and Fischetti, V.A. (2003) Synergistic lethal effect of a combination of phage lytic enzymes with different activities on penicillin-sensitive and -resistant Streptococcus pneumoniae strains. Antimicrobial Agents and Chemotherapy 47, 375-377.
49. Loeffler, J.M., Nelson, D. and Fischetti, V.A. (2001) Rapid killing of Streptococcus pneumoniae with a bacteriophage cell wall hydrolase. Science 294, 2170-2172.
50. Loessner, M.J., Kramer, K., Ebel, F. and Scherer, S. (2002) C-terminal domains of Listeria monocytogenes bacteriophage murein hydrolases determine specific recognition and high-affinity binding to bacterial cell wall carbohydrates. Molecular Microbiology 44, 335-349.
51. Loeffler, J.M., Djurkovic, S. and Fischetti, V.A. (2003) Phage lytic enzyme Cpl-1 as a novel antimicrobial for pneumococcal bacteremia. Infection and Immunity 71, 6199-6204.
52. Lopez, R., Garcia, E., Garcia, P. and Garcia, J.L. (1997) The pneumococcal cell wall degrading enzymes: a modular design to create new lysins? Microbial Drug Resistance 3, 199-211.
53. Lu, T. and Collins, J. (2007) Dispersing biofilms with engineered enzymatic bacteriophage. Proceedings of the National Academy of Sciences of the United States of America 104, 11197-11202.
54. Mahichi, F., Synnott, A.J., Yamamichi, K., Osada, T. and Tanji, Y. (2009) Site-specific recombination of T2 phage using IP008 long tail fiber genes provides a targeted method for expanding host range while retaining lytic activity. FEMS Microbiology Letters 295, 211-217.
55. Manoharadas, S., Witte, A. and Bläsi, U. (2009) Antimicrobial activity of a chimeric enzybiotic towards Staphylococcus aureus. Journal of Biotechnology 139, 118-123.
56. Matsuzaki, S., Rashel, M., Uchiyama, J., Sakurai, S., Ujihara, T., Kuroda, M., Ikeuchi, M., Tani, T., Fujieda, M., Wakiguchi, H. and Imai, S. (2005) Bacteriophage therapy: a revitalized therapy against bacterial infectious diseases. Journal of Infection and Chemotherapy 11, 211-219.
57. Moak, M. and Molineux, I.J. (2004) Peptidoglycan hydrolytic activities associated with bacteriophage virions. Molecular Microbiology 51, 1169-1183.
58. Modi, R., Hirvi, Y., Hill, A. and Griffiths, M.W. (2001) Effect of phage on survival of Salmonella Enteritidis during manufacture and storage of Cheddar cheese made from raw and pasteurized milk. Journal of Food Protection 64, 927-933.
59. Navarre, W.W., Ton-That, H., Faull, K.F. and Schneewind, O. (1999) Multiple enzymatic activities of the murein hydrolase from staphylococcal phage ?11. Journal of Biological Chemistry 274, 15847-15856.
60. Obeso, J.M., Martínez, B., Rodríguez, A. and García, P. (2008) Lytic activity of the recombinant staphylococcal bacteriophage phiH5 endolysin active against Staphylococcus aureus in milk. International Journal of Food Microbiology 128, 212-218.
61. Oda, M., Morita, M., Unno, H. and Tanji, Y. (2004) Rapid detection of Escherichia coli O157:H7 by using green fluorescent protein labeled PP01 bacteriophage. Applied and Environmental Microbiology 70, 527-534.
62. Orito, Y., Morita, M., Hori, K., Unno, H. and Tanji, Y. (2004) Bacillus amyloliquefaciens phage endolysin can enhance permeability of Pseudomonas aeruginosa outer membrane and induce cell lysis. Applied Microbiology and Biotechnology 65, 105-109.
63. Park, S.C. and Nakai, T. (2003) Bacteriophage control of Pseudomonas plecoglossicida infection in ayu Plecoglossus altivelis. Diseases of Aquatic Organisms 53, 33-39.
64. Petrenko, V.A. and Vodyanoy, V.J. (2003) Phage display for detection of biological threat agents. Journal of Microbiological Methods 53, 253-262.
65. Pritchard, D.G., Dong, S., Baker, J.R. and Engler, J.A. (2004) The bifunctional peptidoglycan lysin of Streptococcus agalactiae bacteriophage B30. Microbiology 150, 2079-2087.
66. Rashel, M., Uchiyama, J., Ujihara, T., Uehara, Y., Kuramoto, S., Sugihara, S., Yagyu, K., Muraoka, A.,
67. Sugai, M., Hiramatsu, K., Honke, K. and Matsuzaki, S. (2007) Efficient elimination of multidrugresistant Staphylococcus aureus by cloned lysin derived from bacteriophage MR11. Journal of Infectious Diseases 196, 1237-1247.
68. Rashel, M., Uchiyama, J., Takemura, I., Hoshiba, H., Ujihara, T., Takatsuji, H., Honke, K. and Matsuzaki, S. (2008) Tail-associated structural protein gp61 of Staphylococcus aureus phage ?MR11 has bifunctional lytic activity. FEMS Microbiology Letters 284, 9-16.
69. Rees, C.E.D. and Dodd, C.E.R. (2006) Phage for rapid detection and control of bacterial pathogens in food. Advances in Applied Microbiology 59, 159-186.
70. Roy, B., Ackermann, H.W., Pandian, S., Picard, G. and Goulet, J. (1993) Biological inactivation of adhering Listeria monocytogenes by listeria phages and a quaternary ammonium compound. Applied and Environmental Microbiology 59, 2914-2917.
71. Sainathrao, S., Mohan, K.V. and Atreya, C. (2009) Gamma-phage lysin PlyG sequence-based synthetic peptides coupled with Qdot-nanocrystals are useful for developing detection methods for Bacillus anthracis by using its surrogates, B. anthracis-Sterne and B. cereus-4342. BMC Biotechnology 22, 67.
72. São-José, C., Parreira, R., Vieira, G. and Santos, M.A. (2000) The N-terminal region of the Oenococcus oeni bacteriophage fOg44 lysin behaves as a bona fide signal peptide in Escherichia coli and as a cis-inhibitory element, preventing lytic activity on oenococcal cells. Journal of Bacteriology 182, 5823-5831.
73. Sass, P. and Bierbaum, G. (2007) Lytic activity of recombinant bacteriophage ?11 and ?12 endolysins on whole cells and biofilms of Staphylococcus aureus. Applied and Environmental Microbiology 73, 347-352.
74. Schuch, R., Nelson, D. and Fischetti, V.A. (2002) A bacteriolytic enzyme that detects and kills Bacillus anthracis. Nature 418, 884-889.
75. Sillankorva, S., Neubauer, P. and Azeredo, J. (2008) Pseudomonas fluorescens biofilms subjected to phage phiIBB-PF7A. BMC Biotechnology 27, 79.
76. Singh, A., Glass, N., Tolba, M., Brovko, L., Griffiths, M. and Evoy, S. (2009) Immobilization of bacteriophages on gold surfaces for the specific capture of pathogens. Biosensors and Bioelectronics 24, 3645-3651.
77. Skovgaard, N. (2007) New trends in emerging pathogens. International Journal of Food Microbiology 120, 217-224.
78. Sorek, R., Kunin, V. and Hugenholtz, P. (2008) CRISPR-a widespread system that provides acquired resistance against phages in bacteria and archeae. Nature Reviews Microbiology 6, 181-186.
79. Stojković, E.A. and Rothman-Denes, L.B. (2007) Coliphage N4 N-acetylmuramidase defines a new family of murein hydrolases. Journal of Molecular Biology 366, 406-419.
80. Sulakvelidze, A. and Kutter, E. (2005) Bacteriophage therapy in humans. In: Kutter, E. and Sulakvelidze, A. (eds) Bacteriophages: Biology and Application. Boca Raton CRC Press, Palm Beach, Florida, pp. 381-436.
81. Tanji, Y., Furukawa, C., Na, S.H., Hijikata, T., Miyanaga, K. and Unno, H. (2004) Escherichia coli detection by GFP-labeled lysozyme-inactivated T4 bacteriophage. Journal of Biotechnology 114, 11-20.
82. Turner, M.S., Waldherr, F., Loessner, M.J. and Giffard, P.M. (2007) Antimicrobial activity of lysostaphin and a Listeria monocytogenes bacteriophage endolysin produced and secreted by lactic acid bacteria. Systematic and Applied Microbiology 30, 58-67.
83. Twort, F. W. (1915) An investigation on the nature of ultramicroscopic viruses. Lancet ii, 1241.
84. Walsh, C. and Fanning, S. (2008) Antimicrobial resistance in foodborne pathogens-a cause for concern? Current Drug Targets 9, 808-815.
85. Weinbauer, M.G. (2004) Ecology of prokaryotic viruses. FEMS Microbiology Reviews 28, 127-181.
86. Wesche, A.M., Gurtler, J.B., Marks, B.P. and Ryser, E.T. (2009) Stress, sublethal injury, resuscitation, and virulence of bacterial foodborne pathogens. Journal of Food Protection 72, 1121-1138.
87. Whichard, J.M., Sriranganathan, N. and Pierson, F. W. (2003) Suppression of Salmonella growth by wildtype and large-plaque variants of bacteriophage Felix O1 in liquid culture and on chicken frankfurters. Journal of Food Protection 66, 220-225.
88. Xu, M., Struck, D.K., Deaton, J., Wang, I.N. and Young, R.Y. (2004) A signal-arrest release sequence mediates export and control of the phage P1 endolysin. Proceedings of the National Academy of Sciences of the United States of America 101, 6415-6420.
89. Yokoi, K., Kawahigashi, N., Uchida, M., Sugahara, K., Shinohara, M., Kawasaki, K.I., Nakamura, S., Taketo, A. and Kodaira, K.I. (2005) The two component cell lysis genes holWMY and lysWMY of the
90. Staphylococcus warneri M phage var?WMY: cloning, sequencing, expression, and mutational analysis in Escherichia coli. Gene 351, 97-108.
91. Young, R.Y., Wang, I.N. and Roof, W.D. (2000) Phages will out: strategies of host cell lysis. Trends in Microbiology 8, 120-128.