-
1
-
-
60549112066
-
Functional genomics opens doors to understanding metamorphosis in nonmodel invertebrate organisms
-
Medina M, (2009) Functional genomics opens doors to understanding metamorphosis in nonmodel invertebrate organisms. Molecular Ecology 18: 763-764.
-
(2009)
Molecular Ecology
, vol.18
, pp. 763-764
-
-
Medina, M.1
-
2
-
-
33746152412
-
Unifying concepts learned from methyl farnesoate for invertebrate reproduction and post-embryonic development
-
Laufer H, Biggers WJ, (2001) Unifying concepts learned from methyl farnesoate for invertebrate reproduction and post-embryonic development. American Zoologist 41: 442-457.
-
(2001)
American Zoologist
, vol.41
, pp. 442-457
-
-
Laufer, H.1
Biggers, W.J.2
-
3
-
-
33845333158
-
Identification of a juvenile hormone-like compound in a crustacean
-
Laufer H, Borst D, Baker FC, Reuter CC, Tsai LW, et al. (1987) Identification of a juvenile hormone-like compound in a crustacean. Science 235: 202-205.
-
(1987)
Science
, vol.235
, pp. 202-205
-
-
Laufer, H.1
Borst, D.2
Baker, F.C.3
Reuter, C.C.4
Tsai, L.W.5
-
4
-
-
1642529589
-
CYP15A1, the cytochrome P450 that catalyzes epoxidation of methyl farnesoate to juvenile hormone III in cockroach corpora allata
-
Helvig C, Koener JF, Unnithan GC, Feyereisen R, (2004) CYP15A1, the cytochrome P450 that catalyzes epoxidation of methyl farnesoate to juvenile hormone III in cockroach corpora allata. Proceedings of the National Academy of Science of the United States of America 101: 4024-4029.
-
(2004)
Proceedings of the National Academy of Science of the United States of America
, vol.101
, pp. 4024-4029
-
-
Helvig, C.1
Koener, J.F.2
Unnithan, G.C.3
Feyereisen, R.4
-
5
-
-
0033619231
-
The origins of insect metamorphosis
-
Truman JW, Riddiford LM, (1999) The origins of insect metamorphosis. Nature 401: 447-452.
-
(1999)
Nature
, vol.401
, pp. 447-452
-
-
Truman, J.W.1
Riddiford, L.M.2
-
6
-
-
0025871371
-
Methyl farnesoate in the prawn Macrobrachium rosenbergii: Synthesis by the mandibular organ in vitro, and titers in the hemolymph
-
Sagi A, Homola E, Laufer H, (1991) Methyl farnesoate in the prawn Macrobrachium rosenbergii: Synthesis by the mandibular organ in vitro, and titers in the hemolymph. Comparative Biochemistry and Physiology Part B: Comparative Biochemistry 99: 879-882.
-
(1991)
Comparative Biochemistry and Physiology Part B: Comparative Biochemistry
, vol.99
, pp. 879-882
-
-
Sagi, A.1
Homola, E.2
Laufer, H.3
-
7
-
-
0031760113
-
Effect of methyl farnesoate on late larval development and metamorphosis in the prawn Macrobrachium rosenbergii (Decapoda, Palaemonidae): A juvenoid-like effect?
-
Abdu U, Takac P, Laufer H, Sagi A, (1998) Effect of methyl farnesoate on late larval development and metamorphosis in the prawn Macrobrachium rosenbergii (Decapoda, Palaemonidae): A juvenoid-like effect? Biological Bulletin 195: 112-119.
-
(1998)
Biological Bulletin
, vol.195
, pp. 112-119
-
-
Abdu, U.1
Takac, P.2
Laufer, H.3
Sagi, A.4
-
8
-
-
0035577854
-
Hedgehog signaling in animal development: paradigms and principles
-
Ingham PW, McMahon AP, (2001) Hedgehog signaling in animal development: paradigms and principles. Genes & Development 15: 3059-3087.
-
(2001)
Genes & Development
, vol.15
, pp. 3059-3087
-
-
Ingham, P.W.1
McMahon, A.P.2
-
10
-
-
84863387019
-
Involvement of Wnt signaling pathways in the metamorphosis of the bryozoan Bugula neritina
-
Wong YH, Wang H, Ravasi T, Qian PY, (2012) Involvement of Wnt signaling pathways in the metamorphosis of the bryozoan Bugula neritina. PLoS ONE 7: e33323.
-
(2012)
PLoS ONE
, vol.7
-
-
Wong, Y.H.1
Wang, H.2
Ravasi, T.3
Qian, P.Y.4
-
11
-
-
84861569715
-
Transcriptome profiling of the demosponge Amphimedon queenslandica reveals genome-wide events that accompany major life cycle transitions
-
Conaco C, Neveu P, Zhou H, Arcila ML, Degnan SM, et al. (2012) Transcriptome profiling of the demosponge Amphimedon queenslandica reveals genome-wide events that accompany major life cycle transitions. BMC Genomics 13: 209.
-
(2012)
BMC Genomics
, vol.13
, pp. 209
-
-
Conaco, C.1
Neveu, P.2
Zhou, H.3
Arcila, M.L.4
Degnan, S.M.5
-
12
-
-
34547700777
-
Gene expression profile during the life cycle of the urochordate Ciona intestinalis
-
Azumi K, Sabau SV, Fujie M, Usami T, Koyanagi R, et al. (2007) Gene expression profile during the life cycle of the urochordate Ciona intestinalis. Developmental Biology 308: 572-582.
-
(2007)
Developmental Biology
, vol.308
, pp. 572-582
-
-
Azumi, K.1
Sabau, S.V.2
Fujie, M.3
Usami, T.4
Koyanagi, R.5
-
13
-
-
58949090247
-
Microarray analysis identifies candidate genes for key roles in coral development
-
Grasso LC, Maindonald J, Rudd S, Hayward DC, Saint R, et al. (2008) Microarray analysis identifies candidate genes for key roles in coral development. BMC Genomics 9: 540.
-
(2008)
BMC Genomics
, vol.9
, pp. 540
-
-
Grasso, L.C.1
Maindonald, J.2
Rudd, S.3
Hayward, D.C.4
Saint, R.5
-
14
-
-
79955019810
-
The biology of coral metamorphosis: molecular responses of larvae to inducers of settlement and metamorphosis
-
Grasso LC, Negri AP, Foret S, Saint R, Hayward DC, et al. (2011) The biology of coral metamorphosis: molecular responses of larvae to inducers of settlement and metamorphosis. Developmental Biology 353: 411-419.
-
(2011)
Developmental Biology
, vol.353
, pp. 411-419
-
-
Grasso, L.C.1
Negri, A.P.2
Foret, S.3
Saint, R.4
Hayward, D.C.5
-
15
-
-
79951574787
-
Developmental transcriptome of Aplysia californica
-
Heyland A, Vue Z, Voolstra CR, Medina M, Moroz LL, (2011) Developmental transcriptome of Aplysia californica. Journal of Experimental Zoology 316B: 113-134.
-
(2011)
Journal of Experimental Zoology
, vol.316 B
, pp. 113-134
-
-
Heyland, A.1
Vue, Z.2
Voolstra, C.R.3
Medina, M.4
Moroz, L.L.5
-
16
-
-
71649110546
-
Gene expression microarray analysis encompassing metamorphosis and the onset of calcification in the scleractinian coral Montastraea faveolata
-
Reyes-Bermudez A, Desalvo MK, Voolstra CR, Sunagawa S, Szmant AM, et al. (2009) Gene expression microarray analysis encompassing metamorphosis and the onset of calcification in the scleractinian coral Montastraea faveolata. Marine Genomics 2: 149-159.
-
(2009)
Marine Genomics
, vol.2
, pp. 149-159
-
-
Reyes-Bermudez, A.1
Desalvo, M.K.2
Voolstra, C.R.3
Sunagawa, S.4
Szmant, A.M.5
-
17
-
-
60549099038
-
Widespread transcriptional changes pre-empt the critical pelagic-benthic transition in the vetigastropod Haliotis asinina
-
Williams EA, Degnan BM, Gunter H, Jackson DJ, Woodcroft BJ, et al. (2009) Widespread transcriptional changes pre-empt the critical pelagic-benthic transition in the vetigastropod Haliotis asinina. Molecular Ecology 18: 1006-1025.
-
(2009)
Molecular Ecology
, vol.18
, pp. 1006-1025
-
-
Williams, E.A.1
Degnan, B.M.2
Gunter, H.3
Jackson, D.J.4
Woodcroft, B.J.5
-
18
-
-
63749107527
-
Microarray analysis of female- and larval-specific gene expression in the horn fly (Diptera: Muscidae)
-
Guerrero FD, Dowd SE, Sun Y, Saldivar L, Wiley GB, et al. (2009) Microarray analysis of female- and larval-specific gene expression in the horn fly (Diptera: Muscidae). Journal of Medical Entomology 46: 257-270.
-
(2009)
Journal of Medical Entomology
, vol.46
, pp. 257-270
-
-
Guerrero, F.D.1
Dowd, S.E.2
Sun, Y.3
Saldivar, L.4
Wiley, G.B.5
-
19
-
-
34547395799
-
Life cycle transcriptome of the malaria mosquito Anopheles gambiae and comparison with the fruitfly Drosophila melanogaster
-
Koutsos AC, Blass C, Meister S, Schmidt S, MacCallum RM, et al. (2007) Life cycle transcriptome of the malaria mosquito Anopheles gambiae and comparison with the fruitfly Drosophila melanogaster. Proceedings of the National Academy of Science of the United States of America 104: 11304-11309.
-
(2007)
Proceedings of the National Academy of Science of the United States of America
, vol.104
, pp. 11304-11309
-
-
Koutsos, A.C.1
Blass, C.2
Meister, S.3
Schmidt, S.4
MacCallum, R.M.5
-
20
-
-
82055175733
-
De novo assembly and characterization of a maternal and developmental transcriptome for the emerging model crustacean Parhyale hawaiensis
-
Zeng V, Villanueva KE, Ewen-Campen BS, Alwes F, Browne WE, et al. (2011) De novo assembly and characterization of a maternal and developmental transcriptome for the emerging model crustacean Parhyale hawaiensis. BMC Genomics 12: 581.
-
(2011)
BMC Genomics
, vol.12
, pp. 581
-
-
Zeng, V.1
Villanueva, K.E.2
Ewen-Campen, B.S.3
Alwes, F.4
Browne, W.E.5
-
21
-
-
79960901079
-
Toward an understanding of the molecular mechanisms of barnacle larval settlement: a comparative transcriptomic approach
-
Chen ZF, Matsumura K, Wang H, Arellano SM, Yan X, et al. (2011) Toward an understanding of the molecular mechanisms of barnacle larval settlement: a comparative transcriptomic approach. PLoS ONE 6: e22913.
-
(2011)
PLoS ONE
, vol.6
-
-
Chen, Z.F.1
Matsumura, K.2
Wang, H.3
Arellano, S.M.4
Yan, X.5
-
22
-
-
39649117755
-
The impact of next-generation sequencing technology on genetics
-
Mardis ER, (2008) The impact of next-generation sequencing technology on genetics. Trends in Genetics 24: 133-141.
-
(2008)
Trends in Genetics
, vol.24
, pp. 133-141
-
-
Mardis, E.R.1
-
23
-
-
82955187842
-
Transcriptomics of a giant freshwater prawn (Macrobrachium rosenbergii): de novo assembly, annotation and marker discovery
-
Jung H, Lyons RE, Dinh H, Hurwood DA, McWilliam S, et al. (2011) Transcriptomics of a giant freshwater prawn (Macrobrachium rosenbergii): de novo assembly, annotation and marker discovery. PLoS ONE 6: e27938.
-
(2011)
PLoS ONE
, vol.6
-
-
Jung, H.1
Lyons, R.E.2
Dinh, H.3
Hurwood, D.A.4
McWilliam, S.5
-
24
-
-
84862649983
-
Transcriptome analysis of the oriental river prawn, Macrobrachium nipponense using 454 pyrosequencing for discovery of genes and markers
-
Ma K, Qiu G, Feng J, Li J, (2012) Transcriptome analysis of the oriental river prawn, Macrobrachium nipponense using 454 pyrosequencing for discovery of genes and markers. PLoS ONE 7: e39727.
-
(2012)
PLoS ONE
, vol.7
-
-
Ma, K.1
Qiu, G.2
Feng, J.3
Li, J.4
-
25
-
-
0001310490
-
Larval development of Macrobrachium rosenbergii (de Man) reared in the laboratory
-
Uno Y, Chin Soo K, (1969) Larval development of Macrobrachium rosenbergii (de Man) reared in the laboratory. Tokyo University of Fisheries 55: 179-190.
-
(1969)
Tokyo University of Fisheries
, vol.55
, pp. 179-190
-
-
Uno, Y.1
Chin Soo, K.2
-
27
-
-
0037111011
-
Ontogenetic variation in digestive proteinase activity, RNA and DNA content of larval and postlarval white shrimp Litopenaeus schmitti
-
Lemos D, Garcia-Carreño FL, Hernández P, Navarrete del Toro A, (2002) Ontogenetic variation in digestive proteinase activity, RNA and DNA content of larval and postlarval white shrimp Litopenaeus schmitti. Aquaculture 214: 363-380.
-
(2002)
Aquaculture
, vol.214
, pp. 363-380
-
-
Lemos, D.1
Garcia-Carreño, F.L.2
Hernández, P.3
Navarrete del Toro, A.4
-
28
-
-
79956308325
-
Mechanisms and functions of Hedgehog signalling across the metazoa
-
Ingham PW, Nakano Y, Seger C, (2011) Mechanisms and functions of Hedgehog signalling across the metazoa. Nature Reviews Genetics 12: 393-406.
-
(2011)
Nature Reviews Genetics
, vol.12
, pp. 393-406
-
-
Ingham, P.W.1
Nakano, Y.2
Seger, C.3
-
29
-
-
79959262926
-
Temporal-spatial changes in Sonic Hedgehog expression and signaling reveal different potentials of ventral mesencephalic progenitors to populate distinct ventral midbrain nuclei
-
Blaess S, Bodea G, Kabanova A, Chanet S, Mugniery E, et al. (2011) Temporal-spatial changes in Sonic Hedgehog expression and signaling reveal different potentials of ventral mesencephalic progenitors to populate distinct ventral midbrain nuclei. Neural Development 6: 29 (19 pages).
-
(2011)
Neural Development
, vol.6
, pp. 29
-
-
Blaess, S.1
Bodea, G.2
Kabanova, A.3
Chanet, S.4
Mugniery, E.5
-
30
-
-
77954928435
-
Midline signaling and evolution of the forebrain in chordates: a focus on the lamprey Hedgehog case
-
Rétaux S, Kano S, (2010) Midline signaling and evolution of the forebrain in chordates: a focus on the lamprey Hedgehog case. Integrative and Comparative Biology 50: 98-109.
-
(2010)
Integrative and Comparative Biology
, vol.50
, pp. 98-109
-
-
Rétaux, S.1
Kano, S.2
-
31
-
-
0024254534
-
Requirements for hedgehog, a segmental polarity gene, in patterning larval and adult cuticle of Drosophila
-
Mohler J, (1988) Requirements for hedgehog, a segmental polarity gene, in patterning larval and adult cuticle of Drosophila. Genetics 120: 1061-1072.
-
(1988)
Genetics
, vol.120
, pp. 1061-1072
-
-
Mohler, J.1
-
32
-
-
55849125793
-
Wnt5a regulates ventral midbrain morphogenesis and the development of A9-A10 dopaminergic cells In Vivo
-
Andersson ER, Prakash N, Cajanek L, Minina E, Bryja V, et al. (2008) Wnt5a regulates ventral midbrain morphogenesis and the development of A9-A10 dopaminergic cells In Vivo. PLoS ONE 3: e3517.
-
(2008)
PLoS ONE
, vol.3
-
-
Andersson, E.R.1
Prakash, N.2
Cajanek, L.3
Minina, E.4
Bryja, V.5
-
33
-
-
43149115851
-
Velvet: algorithms for de novo short read assembly using de Bruijn graphs
-
Zerbino DR, Birney E, (2008) Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Research 18: 821-829.
-
(2008)
Genome Research
, vol.18
, pp. 821-829
-
-
Zerbino, D.R.1
Birney, E.2
-
34
-
-
84859768479
-
Oases: Robust de novo RNA-seq assembly across the dynamic range of expression levels
-
Schulz MH, Zerbino DR, Vingron M, Birney E, (2012) Oases: Robust de novo RNA-seq assembly across the dynamic range of expression levels. Bioinformatics 28: 1086-1092.
-
(2012)
Bioinformatics
, vol.28
, pp. 1086-1092
-
-
Schulz, M.H.1
Zerbino, D.R.2
Vingron, M.3
Birney, E.4
-
35
-
-
45549089420
-
High-throughput functional annotation and data mining with the Blast2GO suite
-
Götz S, Garcia-Gomez JM, Terol J, Williams TD, Nagaraj SH, et al. (2008) High-throughput functional annotation and data mining with the Blast2GO suite. Nucleic Acids Research 36: 3420-3435.
-
(2008)
Nucleic Acids Research
, vol.36
, pp. 3420-3435
-
-
Götz, S.1
Garcia-Gomez, J.M.2
Terol, J.3
Williams, T.D.4
Nagaraj, S.H.5
-
36
-
-
24644503098
-
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
-
Conesa A, Götz S, Garcia-Gomez JM, Terol J, Talon M, et al. (2005) Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21: 3674-3676.
-
(2005)
Bioinformatics
, vol.21
, pp. 3674-3676
-
-
Conesa, A.1
Götz, S.2
Garcia-Gomez, J.M.3
Terol, J.4
Talon, M.5
-
37
-
-
0034069495
-
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nature Genetics 25: 25-29.
-
(2000)
Nature Genetics
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
-
39
-
-
33644874819
-
From genomics to chemical genomics: new developments in KEGG
-
Kanehisa M, Goto S, Hattori M, Aoki-Kinoshita KF, Itoh M, et al. (2006) From genomics to chemical genomics: new developments in KEGG. Nucleic Acids Research 34: D354-357.
-
(2006)
Nucleic Acids Research
, vol.34
-
-
Kanehisa, M.1
Goto, S.2
Hattori, M.3
Aoki-Kinoshita, K.F.4
Itoh, M.5
-
40
-
-
38549126643
-
KEGG for linking genomes to life and the environment
-
Kanehisa M, Araki M, Goto S, Hattori M, Hirakawa M, et al. (2008) KEGG for linking genomes to life and the environment. Nucleic Acids Research 36: D480-484.
-
(2008)
Nucleic Acids Research
, vol.36
-
-
Kanehisa, M.1
Araki, M.2
Goto, S.3
Hattori, M.4
Hirakawa, M.5
-
41
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ, (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680.
-
(1994)
Nucleic Acids Research
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
42
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura K, Dudley J, Nei M, Kumar S, (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution 24: 1596-1599.
-
(2007)
Molecular Biology and Evolution
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
|