-
2
-
-
33747646924
-
An overview of the potassium channel family
-
REVIEWS0004
-
Miller, C. An overview of the potassium channel family. Genome biol 1, REVIEWS0004 (2000).
-
(2000)
Genome Biol
, vol.1
-
-
Miller, C.1
-
3
-
-
0032478818
-
+ conduction and selectivity
-
DOI 10.1126/science.280.5360.69
-
A Doyle, D. et al. The structure of the potassium channel: molecular basis of K1 conduction and selectivity. Science 280, 69-77 (1998). (Pubitemid 28169082)
-
(1998)
Science
, vol.280
, Issue.5360
, pp. 69-77
-
-
Doyle, D.A.1
Cabral, J.M.2
Pfuetzner, R.A.3
Kuo, A.4
Gulbis, J.M.5
Cohen, S.L.6
Chait, B.T.7
MacKinnon, R.8
-
4
-
-
0037198626
-
Crystal structure and mechanism of a calcium-gated potassium channel
-
DOI 10.1038/417515a
-
Jiang, Y. et al. Crystal structure and mechanism of a calcium-gated potassium channel. Nature 417, 515-22 (2002). (Pubitemid 34595912)
-
(2002)
Nature
, vol.417
, Issue.6888
, pp. 515-522
-
-
Jiang, Y.1
Lee, A.2
Chen, J.3
Cadene, M.4
Chait, B.T.5
MacKinnon, R.6
-
5
-
-
12444274301
-
Crystal structure of the potassium channel KirBac1.1 in the closed state
-
DOI 10.1126/science.1085028
-
Kuo, A. et al. Crystal Structure of the potassium channel KirBac1.1 in the Closed State. Science 300, 1922-1926 (2003). (Pubitemid 36734594)
-
(2003)
Science
, vol.300
, Issue.5627
, pp. 1922-1926
-
-
Kuo, A.1
Gulbis, J.M.2
Antcliff, J.F.3
Rahman, T.4
Lowe, E.D.5
Zimmer, J.6
Cuthbertson, J.7
Ashcroft, F.M.8
Ezaki, T.9
Doyle, D.A.10
-
6
-
-
0038076054
-
X-ray structure of a voltage-dependent K1 channel
-
Jiang, Y. et al. X-ray structure of a voltage-dependent K1 channel. Nature 423, 33-41 (2003).
-
(2003)
Nature
, vol.423
, pp. 33-41
-
-
Jiang, Y.1
-
7
-
-
4143053760
-
Potassium channel structures: Do they conform?
-
DOI 10.1016/j.sbi.2004.06.008, PII S0959440X0400106X
-
Gulbis, J. M.&Doyle, D. A. Potassium channel structures: do they conform? Curr. Opin. Struct. Biol. 14, 440-6 (2004). (Pubitemid 39094350)
-
(2004)
Current Opinion in Structural Biology
, vol.14
, Issue.4
, pp. 440-446
-
-
Gulbis, J.M.1
Doyle, D.A.2
-
8
-
-
84872732882
-
Gating dynamics of the potassium channel pore
-
Egelman E. Ed Channel Proteins Oxford Academic Press
-
Oiki, S. Gating Dynamics of the Potassium Channel Pore. Egelman, E. Ed. Comprehensive Biophysics, Vol 6, Channel Proteins, 31-67, Oxford, Academic Press, (2012).
-
(2012)
Comprehensive Biophysics
, vol.6
, pp. 31-67
-
-
Oiki, S.1
-
9
-
-
0035499892
-
+ channel-Fab complex at 2.0 A? resolution
-
DOI 10.1038/35102009
-
Zhou, Y., Morais-Cabral, J., Kaufman, A. & MacKinnon, R. Chemistry of ion coordination and hydration revealed by a K1 channel-Fab complex at 2.0A? resolution. Nature 414, 43-48 (2001). (Pubitemid 33041616)
-
(2001)
Nature
, vol.414
, Issue.6859
, pp. 43-48
-
-
Zhou, Y.1
Morais-Cabral, J.H.2
Kaufman, A.3
Mackinnon, R.4
-
10
-
-
0035499447
-
Energetic optimization of ion conduction rate by the K1 selectivity filter
-
Morais-Cabral, J. H., Zhou, Y. & MacKinnon, R. Energetic optimization of ion conduction rate by the K1 selectivity filter. Nature 414, 37-42 (2001).
-
(2001)
Nature
, vol.414
, pp. 37-42
-
-
Morais-Cabral, J.H.1
Zhou, Y.2
MacKinnon, R.3
-
11
-
-
0033516590
-
+ channel: Electrostatic stabilization of monovalent cations
-
DOI 10.1126/science.285.5424.100
-
Roux, B. & MacKinnon, R. The cavity and pore helices in the KcsA K1 channel: electrostatic stabilization of monovalent cations. Science 285, 100-2 (1999). (Pubitemid 29307574)
-
(1999)
Science
, vol.285
, Issue.5424
, pp. 100-102
-
-
Roux, B.1
MacKinnon, R.2
-
12
-
-
2542507334
-
Permeation in ion channels: The interplay of structure and theory
-
DOI 10.1016/j.tins.2004.03.013, PII S0166223604001067
-
Miloshevsky, G. V. & Jordan, P. C. Permeation in ion channels: the interplay of structure and theory. Trends Neurosci. 27, 308-14 (2004). (Pubitemid 38692411)
-
(2004)
Trends in Neurosciences
, vol.27
, Issue.6
, pp. 308-314
-
-
Miloshevsky, G.V.1
Jordan, P.C.2
-
13
-
-
0036714139
-
+ channel of known structure
-
DOI 10.1085/jgp.20028614
-
Nimigean, C. M. & Miller, C. Na1 Block and Permeation in a K1 Channel of Known Structure. J. Gen. Physiol. 120, 323-335 (2002). (Pubitemid 35014732)
-
(2002)
Journal of General Physiology
, vol.120
, Issue.3
, pp. 323-335
-
-
Nimigean, C.M.1
Miller, C.2
-
14
-
-
80052148175
-
Counting ion and water molecules in a streaming file through the open-filter structure of the K channel
-
Iwamoto, M. & Oiki, S. Counting Ion and Water Molecules in a Streaming File through the Open-Filter Structure of the K Channel. J. Neurosci. 31, 12180-8 (2011).
-
(2011)
J. Neurosci
, vol.31
, pp. 12180-12188
-
-
Iwamoto, M.1
Oiki, S.2
-
15
-
-
77954485089
-
Structural mechanism of C-type inactivation in K1 channels
-
Cuello, L. G., Jogini, V., Cortes, D. M. & Perozo, E. Structural mechanism of C-type inactivation in K1 channels. Nature 466, 203-8 (2010).
-
(2010)
Nature
, vol.466
, pp. 203-208
-
-
Cuello, L.G.1
Jogini, V.2
Cortes, D.M.3
Perozo, E.4
-
16
-
-
23244456428
-
+ channel
-
DOI 10.1126/science.1116269
-
Long, S. B., Campbell, E. B. & Mackinnon, R. Crystal structure of a mammalian voltage-dependent Shaker family K1 channel. Science 309, 897-903 (2005). (Pubitemid 41099919)
-
(2005)
Science
, vol.309
, Issue.5736
, pp. 897-903
-
-
Long, S.B.1
Campbell, E.B.2
MacKinnon, R.3
-
17
-
-
77955423895
-
Novel insights into K1 selectivity from high-resolution structures of an open K1 channel pore
-
Ye, S., Li, Y. & Jiang, Y. Novel insights into K1 selectivity from high-resolution structures of an open K1 channel pore. Nat. Struct. Mol. Biol. 17, 1019-23 (2010).
-
(2010)
Nat. Struct. Mol. Biol
, vol.17
, pp. 1019-1023
-
-
Ye, S.1
Li, Y.2
Jiang, Y.3
-
18
-
-
66149127336
-
Crystal structure of full-length KcsA in its closed conformation
-
Uysal, S. et al. Crystal structure of full-length KcsA in its closed conformation. Proc. Natl. Acad. Sci. USA 106, 6644-6649 (2009).
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 6644-6649
-
-
Uysal, S.1
-
19
-
-
79961067787
-
Mechanism of activation gating in the full-length KcsA K1 channel
-
Uysal, S. et al.Mechanism of activation gating in the full-length KcsA K1 channel. Proc. Natl. Acad. Sci. USA 108, 11896-9 (2011).
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 11896-11899
-
-
Uysal, S.1
-
20
-
-
0032765325
-
Images of oligomeric Kv beta 2, a modulatory subunit of potassium channels
-
DOI 10.1016/S0014-5793(99)01021-2, PII S0014579399010212
-
VanHuizen, R., Czajkowsky, D. M., Shi, D., Shao, Z.&Li, M. Images of oligomeric Kv beta 2, a modulatory subunit of potassium channels. FEBS lett. 457, 107-11 (1999). (Pubitemid 29387419)
-
(1999)
FEBS Letters
, vol.457
, Issue.1
, pp. 107-111
-
-
Van Huizen, R.1
Czajkowsky, D.M.2
Shi, D.3
Shao, Z.4
Li, M.5
-
21
-
-
0343777458
-
Observing single biomolecules at work with the atomic force microscope
-
Engel, A. & Müller, D. Observing single biomolecules at work with the atomic force microscope. Nat. Struct. Biol. 7, 715-718 (2000).
-
(2000)
Nat. Struct. Biol
, vol.7
, pp. 715-718
-
-
Engel, A.1
Müller, D.2
-
22
-
-
33751225988
-
High-resolution AFM of membrane proteins directly incorporated at high density in planar lipid bilayer
-
DOI 10.1529/biophysj.106.087791
-
Milhiet, P.-E. et al. High-resolution AFM of membrane proteins directly incorporated at high density in planar lipid bilayer. Biophys. J. 91, 3268-75 (2006). (Pubitemid 44788261)
-
(2006)
Biophysical Journal
, vol.91
, Issue.9
, pp. 3268-3275
-
-
Milhiet, P.-E.1
Gubellini, F.2
Berquand, A.3
Dosset, P.4
Rigaud, J.-L.5
Le Grimellec, C.6
Levy, D.7
-
23
-
-
20444382012
-
Watching the components of photosynthetic bacterial membranes and their in situ organisation by atomic force microscopy
-
DOI 10.1016/j.bbamem.2005.04.005, PII S0005273605001033
-
Scheuring, S., Le?y, D. & Rigaud, J.-L. Watching the components of photosynthetic bacterial membranes and their in situ organisation by atomic force microscopy. Bioch. Biophys. Acta 1712, 109-27 (2005). (Pubitemid 40799298)
-
(2005)
Biochimica et Biophysica Acta - Biomembranes
, vol.1712
, Issue.2
, pp. 109-127
-
-
Scheuring, S.1
Levy, D.2
Rigaud, J.-L.3
-
24
-
-
35548982646
-
Direct visualization of KirBac3.1 potassium channel gating by atomic force microscopy
-
DOI 10.1016/j.jmb.2007.09.043, PII S0022283607012314
-
Jaros awski, S., Zadek, B., Ashcroft, F., Ve?ien-Bryan, C. & Scheuring, S. Direct visualization of KirBac3.1 potassium channel gating by atomic force microscopy. J. Mol. Biol. 374, 500-5 (2007). (Pubitemid 350007655)
-
(2007)
Journal of Molecular Biology
, vol.374
, Issue.2
, pp. 500-505
-
-
Jaroslawski, S.1
Zadek, B.2
Ashcroft, F.3
Venien-Bryan, C.4
Scheuring, S.5
-
25
-
-
66249107019
-
Direct Observation of ATP-Induced Conformational Changes in Single P234 Receptors
-
Shinozaki, Y. et al. Direct Observation of ATP-Induced Conformational Changes in Single P234 Receptors. PLoS biol. 7, e103 (2009).
-
(2009)
PLoS Biol
, vol.7
-
-
Shinozaki, Y.1
-
26
-
-
84855517288
-
Gating of the MlotiK1 potassium channel involves large rearrangements of the cyclic nucleotide-binding domains
-
Mari, S. et al. Gating of the MlotiK1 potassium channel involves large rearrangements of the cyclic nucleotide-binding domains. Proc. Natl. Acad. Sci. USA 108, 20802-20807 (2011).
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 20802-20807
-
-
Mari, S.1
-
27
-
-
37649021608
-
Global twisting motion of single molecular KcsA potassium channel upon gating
-
Shimizu, H. et al. Global twisting motion of single molecular KcsA potassium channel upon gating. Cell 132, 67-78 (2008).
-
(2008)
Cell
, vol.132
, pp. 67-78
-
-
Shimizu, H.1
-
28
-
-
84897584110
-
Single-molecular gating dynamics for the KcsA potassium channel
-
Oiki, S., Shimizu, H., Iwamoto, M. & Konno, T. Single-Molecular Gating Dynamics for the KcsA Potassium Channel. Adv. Chem. Phys. 146, 147-193 (2012).
-
(2012)
Adv. Chem. Phys
, vol.146
, pp. 147-193
-
-
Oiki, S.1
Shimizu, H.2
Iwamoto, M.3
Konno, T.4
-
29
-
-
77950369710
-
Amolecular mechanism for proton-dependent gating in KcsA
-
Cuello, L. G., Cortes, D. M., Jogini, V., Sompornpisut, A. & Perozo, E. Amolecular mechanism for proton-dependent gating in KcsA. FEBS lett. 584, 1126-32 (2010).
-
(2010)
FEBS Lett
, vol.584
, pp. 1126-1132
-
-
Cuello, L.G.1
Cortes, D.M.2
Jogini, V.3
Sompornpisut, A.4
Perozo, E.5
-
30
-
-
0032875483
-
Single streptomyces lividans K1 channels: Functional asymmetries and sidedness of proton activation
-
Heginbotham, L., LeMasurier, M., Kolmakova-Partensky, L. & Miller, C. Single streptomyces lividans K1 channels: functional asymmetries and sidedness of proton activation. J. Gen. Physiol. 114, 551-60 (1999).
-
(1999)
J. Gen. Physiol
, vol.114
, pp. 551-560
-
-
Heginbotham, L.1
Lemasurier, M.2
Kolmakova-Partensky, L.3
Miller, C.4
-
31
-
-
44349157807
-
Molecular mechanism of pH sensing in KcsA potassium channels
-
DOI 10.1073/pnas.0800873105
-
Thompson, A. N., Posson, D. J., Parsa, P. V. & Nimigean, C. M. Molecular mechanism of pH sensing in KcsA potassium channels. Proc. Natl. Acad. Sci. USA 105, 6900-5 (2008). (Pubitemid 351754502)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.19
, pp. 6900-6905
-
-
Thompson, A.N.1
Posson, D.J.2
Parsa, P.V.3
Nimigean, C.M.4
-
32
-
-
0035013633
-
Molecular architecture of full-length KcsA role of cytoplasmic domains in ion permeation and activation gating
-
DOI 10.1085/jgp.117.2.165
-
Cortes, D. M., Cuello, L. G. & Perozo, E. Molecular architecture of full-length KcsA: role of cytoplasmic domains in ion permeation and activation gating. J. Gen. Physiol. 117, 165-80 (2001). (Pubitemid 32423754)
-
(2001)
Journal of General Physiology
, vol.117
, Issue.2
, pp. 165-180
-
-
Cortes, D.M.1
Cuello, L.G.2
Perozo, E.3
-
33
-
-
0037316987
-
Flexibility analysis of enzyme active sites by crystallographic temperature factors
-
Yuan, Z., Zhao, J. & Wang, Z.-X. Flexibility analysis of enzyme active sites by crystallographic temperature factors. Protein Eng. 16, 109-114 (2003). (Pubitemid 36458649)
-
(2003)
Protein Engineering
, vol.16
, Issue.2
, pp. 109-114
-
-
Yuan, Z.1
Zhao, J.2
Wang, Z.-X.3
-
34
-
-
33745055845
-
Voltage-dependent gating at the KcsA selectivity filter
-
DOI 10.1038/nsmb1070, PII N1070
-
Cordero-Morales, J. F., Cuello, L. G. & Perozo, E. Voltage-dependent gating at the KcsA selectivity filter. Nat. Struct. Mol. Biol. 13, 319-22 (2006). (Pubitemid 43873502)
-
(2006)
Nature Structural and Molecular Biology
, vol.13
, Issue.4
, pp. 319-322
-
-
Cordero-Morales, J.F.1
Cuello, L.G.2
Perozo, E.3
-
35
-
-
0026070139
-
Open channel noise. VI. Analysis of amplitude histograms to determine rapid kinetic parameters
-
Heinemann, S. H. & Sigworth, F. J. Open channel noise. VI. Analysis of amplitude histograms to determine rapid kinetic parameters. Biophys. J. 60, 577-87 (1991).
-
(1991)
Biophys. J
, vol.60
, pp. 577-587
-
-
Heinemann, S.H.1
Sigworth, F.J.2
-
36
-
-
0019327170
-
Fluctuations of barrier structure in ionic channels
-
La?ger, P., Stephan, W. & Frehland, E. Fluctuations of barrier structure in ionic channels. Biochim. Biophys. Acta 602, 167-80 (1980).
-
(1980)
Biochim. Biophys. Acta
, vol.602
, pp. 167-180
-
-
Lager, P.1
Stephan, W.2
Frehland, E.3
-
37
-
-
0021222501
-
+ channels of bovine chromaffin cells
-
Yellen, G. Ionic permeation and blockade in Ca21-activated K1 channels of bovine chromaffin cells. J. Gen. Physiol. 84, 157-86 (1984). (Pubitemid 14057601)
-
(1984)
Journal of General Physiology
, vol.84
, Issue.2
, pp. 157-186
-
-
Yellen, G.1
-
38
-
-
33748802222
-
Surface structure and its dynamic rearrangements of the KcsA potassium channel upon gating and tetrabutylammonium blocking
-
DOI 10.1074/jbc.M602018200
-
Iwamoto, M. et al. Surface structure and its dynamic rearrangements of the KcsA potassium channel upon gating and tetrabutylammonium blocking. J. Biol.Chem. 281, 28379-86 (2006). (Pubitemid 44414551)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.38
, pp. 28379-28386
-
-
Iwamoto, M.1
Shimizu, H.2
Inoue, F.3
Konno, T.4
Sasaki, Y.C.5
Oiki, S.6
-
39
-
-
66249096680
-
Influence of mono-and divalent ions on the formation of supported phospholipid bilayers via vesicle adsorption
-
Seantier, B. & Kasemo, B. Influence of mono-and divalent ions on the formation of supported phospholipid bilayers via vesicle adsorption. Langmuir 25, 5767-72 (2009).
-
(2009)
Langmuir
, vol.25
, pp. 5767-5772
-
-
Seantier, B.1
Kasemo, B.2
-
40
-
-
79551605111
-
Reconstitution and AFM observation of photosynthetic membrane protein assembly in planar lipid bilayers
-
Sumino, A. et al. Reconstitution and AFM Observation of Photosynthetic Membrane Protein Assembly in Planar Lipid Bilayers. e-J. Surf. Sci. Nanotech. 9, 15-20 (2011).
-
(2011)
E-J. Surf. Sci. Nanotech
, vol.9
, pp. 15-20
-
-
Sumino, A.1
-
41
-
-
84872709428
-
-
University of California: San Francisco
-
Case, D. A. et al. AMBER 9. 328 (University of California: San Francisco, 2006).
-
(2006)
AMBER
, vol.9
, pp. 328
-
-
Case, D.A.1
-
42
-
-
33645961739
-
A smooth particle mesh Ewald method
-
Essmann, U., Perera, L. & Berkowitz, M. A smooth particle mesh Ewald method. J. Chem. Phys. 103, 31-34 (1995).
-
(1995)
J. Chem. Phys
, vol.103
, pp. 31-34
-
-
Essmann, U.1
Perera, L.2
Berkowitz, M.3
-
43
-
-
33646940952
-
Numerical integration of the cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
-
Ryckaert, J., Ciccotti, G. & Berendsen, H. J. C. Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes. J. Comput. Phys. 23, 327-341 (1977).
-
(1977)
J. Comput. Phys
, vol.23
, pp. 327-341
-
-
Ryckaert, J.1
Ciccotti, G.2
Berendsen, H.J.C.3
-
44
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen, W., Chandrasekhar, J., Madura, J., Impey, R. & Klein,M. Comparison of simple potential functions for simulating liquid water. J. Chem. Phys. 79, 926-935 (1983).
-
(1983)
J. Chem. Phys
, vol.79
, pp. 926-935
-
-
Jorgensen, W.1
Chandrasekhar, J.2
Madura, J.3
Impey, R.4
Kleinm5
-
45
-
-
41549149586
-
Biomolecular simulations of membranes: Physical properties from different force fields
-
Siu, S., Váha, R., Jungwirth, P. & Bökmann, R. Biomolecular simulations of membranes: Physical properties from different force fields. J. Chem. Phys. 128, 125103 (2008).
-
(2008)
J. Chem. Phys
, vol.128
, pp. 125103
-
-
Siu, S.1
Váha, R.2
Jungwirth, P.3
Bökmann, R.4
-
46
-
-
0029636784
-
Mechanism and thermodynamics of ion selectivity in aqueous solutions of 18-crown-6 ether: A molecular dynamics study
-
Dang, L. Mechanism and thermodynamics of ion selectivity in aqueous solutions of 18-crown-6 ether: a molecular dynamics study. J. Am. Chem. Soc. 117, 6954-6960 (1995).
-
(1995)
J. Am. Chem. Soc
, vol.117
, pp. 6954-6960
-
-
Dang, L.1
-
47
-
-
35948966376
-
Spontaneous formation of KCl aggregates in biomolecular simulations: A force field issue?
-
Auffinger, P., Cheatham III, T. E. & Vaiana, A. C. Spontaneous formation of KCl aggregates in biomolecular simulations: A force field issue? J. Chem. Theo. Comput. 3, 1851-1859 (2007).
-
(2007)
J. Chem. Theo. Comput
, vol.3
, pp. 1851-1859
-
-
Auffinger, P.1
Cheatham Iii., T.E.2
Vaiana, A.C.3
-
48
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
Berendsen, H. J. C., Postma, J. P. M., Van Gunsteren, W. F., DiNola, A. & Haak, J. R. Molecular dynamics with coupling to an external bath. J. Chem. Phys. 81, 3684-3690 (1984).
-
(1984)
J. Chem. Phys
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Van Gunsteren, W.F.3
Dinola, A.4
Haak, J.R.5
-
49
-
-
0029011701
-
A second generation force field for the simulation of proteins, nucleic acids, and organic molecules
-
Cornell, W. et al. A second generation force field for the simulation of proteins, nucleic acids, and organic molecules. J. Am. Chem. Soc. 117, 5179-5197 (1995).
-
(1995)
J. Am. Chem. Soc
, vol.117
, pp. 5179-5197
-
-
Cornell, W.1
-
50
-
-
0042213113
-
+ channel in a bilayer membrane
-
Bernèche, S. & Roux, B. Molecular dynamics of the KcsA K1 channel in a bilayer membrane. Biophys. J. 78, 2900-17 (2000). (Pubitemid 30396923)
-
(2000)
Biophysical Journal
, vol.78
, Issue.6
, pp. 2900-2917
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Berneche, S.1
Roux, B.2
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