Detection of inv A gene of Salmonella by DNA-gold nanoparticles biosensor and its comparison with PCR

Journal of Experimental Nanoscience

Volumn 8, Issue 2, 2013, Pages 223-239

  Majdinasab, Marjan ^a   Aminlari, Mahmoud ^a   Sheikhi, Mohammad H ^a   Niakousari, Mehrdad ^a   Shekarforoosh, Shahram ^a  

^a SHIRAZ UNIVERSITY   (Iran)

Author keywords

gold nanoparticle; inv A; nanosensor; PCR; Salmonella

Indexed keywords

AGAROSE GEL ELECTROPHORESIS; ALKANETHIOLS; AU-NANOPARTICLES; CAUSATIVE AGENTS; COLORIMETRIC ASSAYS; COLOUR CHANGE; FOOD INDUSTRIES; FOOD POISONING; GASTROINTESTINAL TRACT; GOLD NANOPARTICLES; HYBRIDISATION; INV A; NUCLEOTIDES SEQUENCES; PATHOGENIC BACTERIUM; PCR; POLYMERASE CHAIN REACTION METHODS; SPECIFIC PRIMERS; SURFACE PLASMONS; TARGET SEQUENCES;

AGGLOMERATION; BIOLOGY; BIOSENSORS; DNA; ELECTROPHORESIS; GENES; GOLD; METAL NANOPARTICLES; NANOSENSORS; OLIGONUCLEOTIDES; PROBES; SALMONELLA;

POLYMERASE CHAIN REACTION;

ALKANETHIOL; DNA; GOLD NANOPARTICLE; OLIGONUCLEOTIDE; UNCLASSIFIED DRUG;

AGAR GEL ELECTROPHORESIS; ARTICLE; BACTERIAL GENE; BIOSENSOR; COLORIMETRY; COMPARATIVE STUDY; CONTROLLED STUDY; GENE AMPLIFICATION; GENETIC ANALYSIS; HYBRIDIZATION; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SALMONELLA; SENSITIVITY ANALYSIS;

EID: 84872529379     PISSN: 17458080     EISSN: 17458099     Source Type: Journal    
DOI: 10.1080/17458080.2011.569575     Document Type: Article

References (22)

1. Elmerdhal Olsen, J. 2000. DNA-based methods for detection of food-borne bacterial pathogens. Food Res. Int., 33: 257-266. doi:10.1016/S0963-9969(00)00045-4
2. Siqueira, R S and Dodd, CER. 2003. Phage amplification assay as rapid method for Salmonella detection. Braz. J. Microbiol., 34: 118-120. doi:10.1590/S1517-83822003000500040
3. Holt, J G, Krieg, N R, Sneath, PHA and Williams, S T. 1994. Berger's Manual of Determinative Bacteriology, 9th, Baltimore: Williams and Wilkins.
4. Li, X, Boudjellab, N and Zhao, X. 2000. Combined PCR and slot blot assay for detection of Salmonella and Listeria monocytogenes. Int. J. Food Microbiol., 56: 167-177. doi:10.1016/S0168-1605(99)00209-3
5. Araj, G F and Chugh, T D. 1987. Detection of Salmonella spp. in clinical specimens by capture enzyme-linked immunosorbent assay. J. Clin. Microbiol., 25: 2150-2153.
6. Aspinall, S T, Hindle, M A and Hutchinson, D N. 1992. Improved isolation of salmonellae from feces using a semisolid Rappaport-Vassiliadis medium. Eur. J. Clin. Microbiol. Infect. Dis., 11: 936-939. doi:10.1007/BF01962379
7. Chiu, C H and Ou, J T. 1996. Rapid identification of Salmonella serovars in feces by specific detection of virulence genes, inv A and spv C by an enrichment broth culture-multiplex PCR combination assay. J. Clin. Microbiol., 67: 2619-2622.
8. Penn, S G, He, L and Natan, M. 2003. Nanoparticles for bioanalysis. Curr. Opin. Chem. Biol., 7: 609-615. doi:10.1016/j.cbpa.2003.08.013
9. Elghanian, R, Storhoff, J J, Mucic, R C, Letsinger, R L and Mirkin, C A. 1997. Selective colorimetric detection of polynucleotides based on the distance-dependent optical properties of gold nanoparticles. Science, 277: 1078-1080. doi:10.1126/science.277.5329.1078
10. Mirkin, C A, Letsinger, R L, Mucic, R C and Storhoff, J J. 1996. A DNA-based method for rationally assembling nanoparticles into macroscopic materials. Nature, 382: 607-609. doi:10.1038/382607a0
11. Parak, W J, Gerion, D, Pellegrino, T, Zanchet, D, Micheel, C M, Williams, S, Boudreau, R, Le Gros, M, Larabell, C and Alivisatos, A P. 2003. Biological applications of colloidal nanocrystals. Nanotechnology, 14: R15-R27. doi:10.1088/0957-4484/14/7/201
12. Niemeyer, C M. 2001. Nanoparticles, proteins, and nucleic acids: Biotechnology meets materials science. Angew. Chem. Int. Ed., 240: 4128-4158. doi:10.1002/1521-3773(20011119)40:22<4128::AID-ANIE4128>3.0.CO;2-S
13. Storhoff, J J, Elghanian, R, Mucic, R C, Mirkin, C A and Letsinger, R L. 1998. One-pot colorimetric differentiation of polynucleotides with single base imperfections using gold nanoparticle probes. J. Am. Chem. Soc., 120: 1959-1964. doi:10.1021/ja972332i
14. Liandris, E, Gazouli, M, Andreadou, M, Comor, M, Abozovic, N, Sechi, L A and Ikonomopoulos, J. 2009. Direct detection of unamplified DNA from pathogenic mycobacteria using DNA-derivatized gold nanoparticles. J. Microbiol. Methods, 78: 260-264. doi:10.1016/j.mimet.2009.06.009
15. Hurst, S J, Lytton-Jean, AKR and Mirkin, C A. 2006. Maximizing DNA loading on a range of gold nanoparticle sizes. Anal. Chem., 78: 8313-8318. doi:10.1021/ac0613582
16. Rashid, M H, Bhattacharjee, R R, Kotal, A and Mandal, T K. 2006. Synthesis of spongy gold nanoparticles with pronounced catalytic activities. Langmuir, 22: 7141-7143. doi:10.1021/la060939j
17. Baptista, P, Pereira, E, Eaton, P, Doria, G, Miranda, A, Gomes, I, Quaresma, P and Franco, R. 2008. Gold nanoparticles for the development of clinical diagnosis methods. Anal. Bioanal. Chem., 391: 943-950. doi:10.1007/s00216-007-1768-z
18. Storhoff, J J, Lucas, A D, Garimella, V, Bao, Y P and Muller, U R. 2004. Homogeneous detection of unamplified genomic DNA sequences based on colorimetric scatter of gold nanoparticle probes. Nat. Biotechnol., 22: 883-887. doi:10.1038/nbt977
19. Ray, P C, Fronter, A, Griffin, J, Kim, C K, Singh, J P and Yu, H. 2005. Laser-induced fluorescence quenching of tagged oligonucleotide probes by gold nanoparticles. Chem. Phys. Lett., 414: 259-264. doi:10.1016/j.cplett.2005.08.069
20. Storhoff, J J, Lazarides, A A, Mucic, R C, Mirkin, C A, Letsinger, R L and Schatz, G C. 2000. What controls the optical properties of DNA-linked gold nanoparticle assemblies?. J. Am. Chem. Soc, 126: 4640-4650. doi:10.1021/ja993825l
21. Mulvaney, P. 1996. Surface Plasmon spectroscopy of nanosized metal particles. Langmuir, 12: 788-800. doi:10.1021/la9502711
22. Thaxton, C S, Georganopoulou, D G and Mirkin, C A. 2006. Gold nanoparticle probes for the detection of nucleic acid targets. Clin. Chim. Acta., 363: 120-126. doi:10.1016/j.cccn.2005.05.042