Gold nanoparticle probes for the detection of nucleic acid targets

Clinica Chimica Acta

Volumn 363, Issue 1-2, 2006, Pages 120-126

  Thaxton, C Shad ^a   Georganopoulou, Dimitra G ^a   Mirkin, Chad A ^a  

^a NORTHWESTERN UNIVERSITY   (United States)

Author keywords

Bio barcode assay; Gold nanoparticles; Microarray; Oligonucleotides; Scanometric detection

Indexed keywords

DNA; GOLD; NANOPARTICLE; NUCLEIC ACID;

ANALYTIC METHOD; DIAGNOSTIC VALUE; DNA MICROARRAY; DNA PROBE; DNA SEQUENCE; ENZYME LINKED IMMUNOSORBENT ASSAY; GEL ELECTROPHORESIS; INTERMETHOD COMPARISON; NONHUMAN; NUCLEIC ACID PROBE; POINT MUTATION; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; REVIEW; SENSITIVITY AND SPECIFICITY; SINGLE NUCLEOTIDE POLYMORPHISM;

BIOSENSING TECHNIQUES; GOLD; NANOSTRUCTURES; NUCLEIC ACIDS; OLIGONUCLEOTIDES; SENSITIVITY AND SPECIFICITY; TEMPERATURE;

EID: 28544432587     PISSN: 00098981     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cccn.2005.05.042     Document Type: Review

References (35)

1. M. Bendayan Worth its weight in gold Science 291 2001 1363 1365
2. M.-C. Daniel, and D. Astruc Gold nanoparticles: assembly, supramolecular chemistry, quantum-size-related properties, and applications toward biology, catalysis, and nanotechnology Chem Rev 104 2004 293 346
3. S.G. Penn, L. He, and M. Natan Nanoparticles for bioanalysis Curr Opin Chem Biol 7 2003 609 615
4. R. Elghanian, J.J. Storhoff, R.C. Mucic, R.L. Letsinger, and C.A. Mirkin Selective colorimetric detection of polynucleotides based on the distance-dependent optical properties of gold nanoparticles Science 277 1997 1078 1080
5. C.A. Mirkin, R.L. Letsinger, R.C. Mucic, and J.J. Storhoff A DNA-based method for rationally assembling nanoparticles into macroscopic materials Nature 382 1996 607 609
6. W.J. Parak, D. Gerion, and T. Pellegrino Biological applications of colloidal nanocrystals Nanotechnology 14 2003 R15 R27
7. C.M. Niemeyer Nanoparticles, proteins, and nucleic acids: biotechnology meets materials science Angew Chem Int Ed 40 2001 4128 4158
8. L. He, M.D. Musick, and S.R. Nicewarner Colloidal Au-enhanced surface plasmon resonance for ultrasensitive detection of DNA hybridization J Am Chem Soc 122 2000 9071 9077
9. R. Jin, G. Wu, Z. Li, C.A. Mirkin, and G.C. Schatz What controls the melting properties of DNA-linked gold nanoparticle assemblies? J Am Chem Soc 125 2003 1643 1654
10. J.J. Storhoff, A.A. Lazarides, R.C. Mucic, C.A. Mirkin, R.L. Letsinger, and G.C. Schatz What controls the optical properties of DNA-linked gold nanoparticle assemblies? J Am Chem Soc 122 2000 4640 4650
11. J.J. Storhoff, R. Elghanian, R.C. Mucic, C.A. Mirkin, and R.L. Letsinger One-pot colorimetric differentiation of polynucleotides with single base imperfections using gold nanoparticle probes J Am Chem Soc 120 1998 1959 1964
12. Y.W. Cao, R. Jin, and C.A. Mirkin DNA-modified core-shell Ag/Au nanoparticles J Am Chem Soc 123 2001 7961 7962
13. R.A. Reynolds III, C.A. Mirkin, and R.L. Letsinger Homogeneous, nanoparticle-based quantitative colorimetric detection of oligonucleotides J Am Chem Soc 122 2000 3795 3796
14. D. Bowtell, and J. Sambrook DNA microarrays: a molecular cloning manual 2003 Cold Spring Harbor Laboratory Press Cold Spring Harbor (NY)
15. G.A. Churchill Fundamentals of experimental design for cDNA microarrays Nat Genet Suppl 32 2002 490 495
16. T.A. Taton, C.A. Mirkin, and R.L. Letsinger Scanometric DNA array detection with nanoparticle probes Science 289 2000 1757 1760
17. J.J. Storhoff, S.S. Marla, and P. Bao Gold nanoparticle-based detection of genomic DNA targets on microarrays using a novel optical detection system Biosens Bioelectron 19 2004 875 883
18. Y.P. Bao, M. Huber, T.F. Wei, S.S. Marla, J.J. Storhoff, and U.R. Muller SNP identification in unamplified human genomic DNA with gold nanoparticle probes Nucleic Acids Res 33 2005 e15
19. M. Huber, T.F. Wei, U.R. Muller, P.A. Lefebvre, S.S. Marla, and Y.P. Bao Gold nanoparticle probe-based gene expression analysis with unamplified total human RNA Nucleic Acids Res 32 2004 e137
20. D.I. Stimpson, J.V. Hoijer, and W.T. Hsieh Real-time detection of DNA hybridization and melting on oligonucleotide arrays by using optical wave guides Proc Natl Acad Sci U S A 92 1995 6379 6383
21. J. Yguerabide, and E.E. Yguerabide Light-scattering submicroscopic particles as highly fluorescent analogs and their use as tracer labels in clinical and biological applications: I. Theory Anal Biochem 262 1998 137 156
22. T.A. Taton, G. Lu, and C.A. Mirkin Two-color labeling of oligonucleotide arrays via size-selective scattering of nanoparticle probes J Am Chem Soc 123 2001 5164 5165
23. J. Yguerabide, and E.E. Yguerabide Light-scattering submicroscopic particles as highly fluorescent analogs and their use as tracer labels in clinical and biological applications: II. Experimental characterization Anal Biochem 262 1998 157 176
24. J.J. Storhoff, A.D. Lucas, V. Garimella, Y.P. Bao, and U.R. Muller Homogeneous detection of unamplified genomic DNA sequences based on colorimetric scatter of gold nanoparticle probes Nat Biotechnol 22 2004 883 887
25. S.J. Park, T.A. Taton, and C.A. Mirkin Array-based electrical detection of DNA with nanoparticle probes Science 295 2002 1503 1506
26. S.W. Chung, D.S. Ginger, and M.W. Morales Top-down meets bottom up: dip-pen nanolithography and DNA-directed assembly of Nanoscale electrical circuits Small 1 2005 2 7
27. S.P.A. Fodor, J.L. Read, M.C. Pirrung, L. Stryer, A.T. Lu, and D. Solas Light-directed, spatially addressable parallel chemical synthesis Science 251 1991 767 773
28. M. Schena, D. Shalon, R.W. Davis, and P.O. Brown Quantitative monitoring of gene expression patterns with a complementary DNA microarray Science 270 1995 467 470
29. Y.W.C. Cao, R.C. Jin, and C.A. Mirkin Nanoparticles with Raman spectroscopic fingerprints for DNA and RNA detection Science 297 2002 1536 1540
30. S.A. Bustin Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays J Mol Endocrinol 25 2000 169 193
31. W.J. Catalona Clinical utility of measurements of free and total prostate-specific antigen (PSA):a review Prostate 7 1996 64 69
32. R.A. Ferguson, H. Yu, M. Kalyvas, S. Zammit, and E. Diamandis Ultrasensitive detection of prostate-specific antigen by a time-resolved immunofluorometric assay and the immulite immunochemiluminescent third-generation assay: potential applications in prostate and breast cancers Clin Chem 42 1996 675 684
33. J.M. Nam, C.S. Thaxton, and C.A. Mirkin Nanoparticle-based bio-barcodes for the ultra-sensitive detection of proteins Science 301 2003 1884 1886
34. D.G. Georganopoulou, L. Chang, and J.M. Nam Nanoparticle-based detection of a soluble pathogenic biomarker for Alzheimer's disease Proc Natl Acad Sci U S A 102 2005 2273 2276
35. J.M. Nam, S.I. Stoeva, and C.A. Mirkin Bio-bar-code-based DNA detection with PCR-like sensitivity J Am Chem Soc 126 2004 5932 5933