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Volumn 29, Issue 1, 2013, Pages 355-364

Lipid nanobilayers to host biological nanopores for DNA translocations

Author keywords

[No Author keywords available]

Indexed keywords

APPLIED VOLTAGES; BI-LAYER; CAPTURE RATE; DNA TRANSLOCATION; GIANT UNILAMELLAR VESICLES; PROTEIN PORES; SALT CONCENTRATION; STAPHYLOCOCCUS AUREUS; STRUCTURAL CHANGE;

EID: 84872109818     PISSN: 07437463     EISSN: 15205827     Source Type: Journal    
DOI: 10.1021/la3041506     Document Type: Article
Times cited : (26)

References (46)
  • 2
    • 84863470343 scopus 로고    scopus 로고
    • Nanopores: A journey towards DNA sequencing
    • Wanunu, M. Nanopores: A journey towards DNA sequencing Phys. Life Rev. 2012, 9 (2) 125-158
    • (2012) Phys. Life Rev. , vol.9 , Issue.2 , pp. 125-158
    • Wanunu, M.1
  • 3
    • 80052258551 scopus 로고    scopus 로고
    • Controlling molecular transport through nanopores
    • Keyser, U. F. Controlling molecular transport through nanopores J. R. Soc., Interface 2011, 8 (63) 1369-1378
    • (2011) J. R. Soc., Interface , vol.8 , Issue.63 , pp. 1369-1378
    • Keyser, U.F.1
  • 4
    • 34248351114 scopus 로고    scopus 로고
    • Solid-state nanopores
    • Dekker, C. Solid-state nanopores Nat. Nanotechnol. 2007, 2 (4) 209-215
    • (2007) Nat. Nanotechnol. , vol.2 , Issue.4 , pp. 209-215
    • Dekker, C.1
  • 6
    • 0030447720 scopus 로고    scopus 로고
    • Structure of staphylococcal α-hemolysin, a heptameric transmembrane pore
    • Song, L.; Hobaugh, M. R.; Shustak, C.; Cheley, S.; Bayley, H.; Gouaux, J. E. Structure of staphylococcal α-hemolysin, a heptameric transmembrane pore Science 1996, 274 (5294) 1859-1865
    • (1996) Science , vol.274 , Issue.5294 , pp. 1859-1865
    • Song, L.1    Hobaugh, M.R.2    Shustak, C.3    Cheley, S.4    Bayley, H.5    Gouaux, J.E.6
  • 7
    • 22244445788 scopus 로고    scopus 로고
    • Imaging α-hemolysin with molecular dynamics: Ionic conductance, osmotic permeability, and the electrostatic potential map
    • Aksimentiev, A.; Schulten, K. Imaging α-hemolysin with molecular dynamics: Ionic conductance, osmotic permeability, and the electrostatic potential map Biophys. J. 2005, 88 (6) 3745-3761
    • (2005) Biophys. J. , vol.88 , Issue.6 , pp. 3745-3761
    • Aksimentiev, A.1    Schulten, K.2
  • 8
    • 78650005633 scopus 로고    scopus 로고
    • Hybrid pore formation by directed insertion of α-haemolysin into solid-state nanopores
    • Hall, A. R.; Scott, A.; Rotem, D.; Mehta, K. K.; Bayley, H.; Dekker, C. Hybrid pore formation by directed insertion of α-haemolysin into solid-state nanopores Nat. Nanotechnol. 2010, 5 (12) 874-877
    • (2010) Nat. Nanotechnol. , vol.5 , Issue.12 , pp. 874-877
    • Hall, A.R.1    Scott, A.2    Rotem, D.3    Mehta, K.K.4    Bayley, H.5    Dekker, C.6
  • 9
    • 79051471458 scopus 로고    scopus 로고
    • Tuning ion current rectification in asymmetric nanopores by signal mixing
    • Kalman, E.; Healy, K.; Siwy, Z. S. Tuning ion current rectification in asymmetric nanopores by signal mixing Europhys. Lett. 2007, 78 (2) 1-6
    • (2007) Europhys. Lett. , vol.78 , Issue.2 , pp. 1-6
    • Kalman, E.1    Healy, K.2    Siwy, Z.S.3
  • 12
    • 65449123416 scopus 로고    scopus 로고
    • Modeling of colloidal transport in capillaries
    • (084702
    • Stober, G.; Steinbock, L. J.; Keyser, U. F. Modeling of colloidal transport in capillaries J. Appl. Phys. 2009, 105 (8 084702
    • (2009) J. Appl. Phys. , vol.105 , Issue.8
    • Stober, G.1    Steinbock, L.J.2    Keyser, U.F.3
  • 14
    • 82555195557 scopus 로고    scopus 로고
    • Magnetically immobilized nanoporous giant proteoliposomes as a platform for biosensing
    • Hsin, T.-M.; Wu, K.; Chellappan, G. Magnetically immobilized nanoporous giant proteoliposomes as a platform for biosensing Analyst 2012, 137 (1) 245-248
    • (2012) Analyst , vol.137 , Issue.1 , pp. 245-248
    • Hsin, T.-M.1    Wu, K.2    Chellappan, G.3
  • 19
    • 38749118607 scopus 로고    scopus 로고
    • Incorporation of α-hemolysin in different tethered bilayer lipid membrane architectures
    • Vockenroth, I. K.; Atanasova, P. P.; Jenkins, A. T. A.; Koper, I. Incorporation of α-hemolysin in different tethered bilayer lipid membrane architectures Langmuir 2007, 24 (2) 496-502
    • (2007) Langmuir , vol.24 , Issue.2 , pp. 496-502
    • Vockenroth, I.K.1    Atanasova, P.P.2    Jenkins, A.T.A.3    Koper, I.4
  • 20
    • 84860505632 scopus 로고    scopus 로고
    • Analyzing single DNA molecules by nanopore translocation
    • Steinbock, L. J.; Keyser, U. F. Analyzing single DNA molecules by nanopore translocation Methods Mol. Biol. 2012, 870, 135-145
    • (2012) Methods Mol. Biol. , vol.870 , pp. 135-145
    • Steinbock, L.J.1    Keyser, U.F.2
  • 23
    • 41149132318 scopus 로고    scopus 로고
    • Rapid screening of membrane protein activity: Electrophysiological analysis of OmpF reconstituted in proteoliposomes
    • Kreir, M.; Farre, C.; Beckler, M.; George, M.; Fertig, N. Rapid screening of membrane protein activity: Electrophysiological analysis of OmpF reconstituted in proteoliposomes Lab Chip 2008, 8 (4) 587-595
    • (2008) Lab Chip , vol.8 , Issue.4 , pp. 587-595
    • Kreir, M.1    Farre, C.2    Beckler, M.3    George, M.4    Fertig, N.5
  • 25
    • 0028980231 scopus 로고
    • Protonation dynamics of the α-toxin ion channel from spectral analysis of pH-dependent current fluctuations
    • Kasianowicz, J. J.; Bezrukov, S. M. Protonation dynamics of the α-toxin ion channel from spectral analysis of pH-dependent current fluctuations Biophys. J. 1995, 69 (1) 94-105
    • (1995) Biophys. J. , vol.69 , Issue.1 , pp. 94-105
    • Kasianowicz, J.J.1    Bezrukov, S.M.2
  • 26
    • 15244338641 scopus 로고    scopus 로고
    • Ion permeation through the α-hemolysin channel: Theoretical studies based on Brownian dynamics and Poisson-Nernst-Plank electrodiffusion theory
    • Noskov, S. Y.; Im, W.; Roux, B. Ion permeation through the α-hemolysin channel: Theoretical studies based on Brownian dynamics and Poisson-Nernst-Plank electrodiffusion theory Biophys. J. 2004, 87 (4) 2299-2309
    • (2004) Biophys. J. , vol.87 , Issue.4 , pp. 2299-2309
    • Noskov, S.Y.1    Im, W.2    Roux, B.3
  • 27
    • 0036389892 scopus 로고    scopus 로고
    • Ion permeation and selectivity of OmpF porin: A theoretical study based on molecular dynamics, Brownian dynamics, and continuum electrodiffusion theory
    • Im, W.; Roux, B. Ion permeation and selectivity of OmpF porin: A theoretical study based on molecular dynamics, Brownian dynamics, and continuum electrodiffusion theory J. Mol. Biol. 2002, 322 (4) 851-869
    • (2002) J. Mol. Biol. , vol.322 , Issue.4 , pp. 851-869
    • Im, W.1    Roux, B.2
  • 28
    • 58149402384 scopus 로고    scopus 로고
    • Enhanced translocation of single DNA molecules through α-hemolysin nanopores by manipulation of internal charge
    • Maglia, G.; Restrepo, M. R.; Mikhailova, E.; Bayley, H. Enhanced translocation of single DNA molecules through α-hemolysin nanopores by manipulation of internal charge Proc. Natl. Acad. Sci. U.S.A. 2008, 105 (50) 19720-19725
    • (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , Issue.50 , pp. 19720-19725
    • Maglia, G.1    Restrepo, M.R.2    Mikhailova, E.3    Bayley, H.4
  • 29
    • 0036674122 scopus 로고    scopus 로고
    • Single molecule measurements of DNA transport through a nanopore
    • Meller, A.; Branton, D. Single molecule measurements of DNA transport through a nanopore Electrophoresis 2002, 23 (16) 2583-2591
    • (2002) Electrophoresis , vol.23 , Issue.16 , pp. 2583-2591
    • Meller, A.1    Branton, D.2
  • 30
    • 0035831563 scopus 로고    scopus 로고
    • Voltage-driven DNA translocations through a nanopore
    • Meller, A.; Nivon, L.; Branton, D. Voltage-driven DNA translocations through a nanopore Phys. Rev. Lett. 2001, 86 (15) 3435-3438
    • (2001) Phys. Rev. Lett. , vol.86 , Issue.15 , pp. 3435-3438
    • Meller, A.1    Nivon, L.2    Branton, D.3
  • 31
    • 76649116514 scopus 로고    scopus 로고
    • Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient
    • Wanunu, M.; Morrison, W.; Rabin, Y.; Grosberg, A. Y.; Meller, A. Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient Nat. Nanotechnol. 2010, 5 (2) 160-165
    • (2010) Nat. Nanotechnol. , vol.5 , Issue.2 , pp. 160-165
    • Wanunu, M.1    Morrison, W.2    Rabin, Y.3    Grosberg, A.Y.4    Meller, A.5
  • 32
    • 0016794743 scopus 로고
    • A structural model for the polyadenylic acid single helix
    • Saenger, W.; Riecke, J.; Suck, D. A structural model for the polyadenylic acid single helix J. Mol. Biol. 1975, 93 (4) 529-534
    • (1975) J. Mol. Biol. , vol.93 , Issue.4 , pp. 529-534
    • Saenger, W.1    Riecke, J.2    Suck, D.3
  • 33
    • 66249096703 scopus 로고    scopus 로고
    • The poly da helix: A new structural motif for high performance DNA-based molecular switches
    • Chakraborty, S.; Sharma, S.; Maiti, P. K.; Krishnan, Y. The poly dA helix: A new structural motif for high performance DNA-based molecular switches Nucleic Acids Res. 2009, 37 (9) 2810-2817
    • (2009) Nucleic Acids Res. , vol.37 , Issue.9 , pp. 2810-2817
    • Chakraborty, S.1    Sharma, S.2    Maiti, P.K.3    Krishnan, Y.4
  • 34
    • 0014574926 scopus 로고
    • Polyriboadenylic and polydeoxyriboadenylic acids. Optical rotatory studies of pH-dependent conformations and their relative stability
    • Adler, A. J.; Grossman, L.; Fasman, G. D. Polyriboadenylic and polydeoxyriboadenylic acids. Optical rotatory studies of pH-dependent conformations and their relative stability Biochemistry 1969, 8 (9) 3846-3859
    • (1969) Biochemistry , vol.8 , Issue.9 , pp. 3846-3859
    • Adler, A.J.1    Grossman, L.2    Fasman, G.D.3
  • 35
    • 0013789804 scopus 로고
    • Base interactions of nucleotide polymers in aqueous solution
    • Van Holde, K. E.; Brahms, J.; Michelson, A. M. Base interactions of nucleotide polymers in aqueous solution J. Mol. Biol. 1965, 12 (3) 726
    • (1965) J. Mol. Biol. , vol.12 , Issue.3 , pp. 726
    • Van Holde, K.E.1    Brahms, J.2    Michelson, A.M.3
  • 36
    • 0037381879 scopus 로고    scopus 로고
    • Dynamics of DNA molecules in a membrane channel probed by active control techniques
    • Bates, M.; Burns, M.; Meller, A. Dynamics of DNA molecules in a membrane channel probed by active control techniques Biophys. J. 2003, 84 (4) 2366-2372
    • (2003) Biophys. J. , vol.84 , Issue.4 , pp. 2366-2372
    • Bates, M.1    Burns, M.2    Meller, A.3
  • 37
    • 0037855911 scopus 로고    scopus 로고
    • Dynamics of polynucleotide transport through nanometre-scale pores
    • Meller, A. Dynamics of polynucleotide transport through nanometre-scale pores J. Phys.: Condens. Matter 2003, 15 (17) R581-R607
    • (2003) J. Phys.: Condens. Matter , vol.15 , Issue.17
    • Meller, A.1
  • 39
    • 78651143831 scopus 로고
    • Structure transitions observed in DNA and poly A in solution as a function of temperature and pH
    • Luzzati, V.; Mathis, A.; Masson, F.; Witz, J. Structure transitions observed in DNA and poly A in solution as a function of temperature and pH J. Mol. Biol. 1964, 10 (1) 28-41
    • (1964) J. Mol. Biol. , vol.10 , Issue.1 , pp. 28-41
    • Luzzati, V.1    Mathis, A.2    Masson, F.3    Witz, J.4
  • 41
    • 80055025150 scopus 로고    scopus 로고
    • Translocation of single-stranded DNA through the α-hemolysin protein nanopore in acidic solutions
    • de Zoysa, R. S. S.; Krishantha, D. M. M.; Zhao, Q.; Gupta, J.; Guan, X. Translocation of single-stranded DNA through the α-hemolysin protein nanopore in acidic solutions Electrophoresis 2011, 32 (21) 3034-3041
    • (2011) Electrophoresis , vol.32 , Issue.21 , pp. 3034-3041
    • De Zoysa, R.S.S.1    Krishantha, D.M.M.2    Zhao, Q.3    Gupta, J.4    Guan, X.5
  • 42
    • 0032555119 scopus 로고    scopus 로고
    • Kinetics of conformational fluctuations in DNA hairpin-loops
    • Bonnet, G.; Krichevsky, O.; Libchaber, A. Kinetics of conformational fluctuations in DNA hairpin-loops Proc. Natl. Acad. Sci. U.S.A. 1998, 95 (15) 8602-8606
    • (1998) Proc. Natl. Acad. Sci. U.S.A. , vol.95 , Issue.15 , pp. 8602-8606
    • Bonnet, G.1    Krichevsky, O.2    Libchaber, A.3
  • 43
    • 0032762996 scopus 로고    scopus 로고
    • Microsecond time-scale discrimination among polycytidylic acid, polyadenylic acid, and polyuridylic acid as homopolymers or as segments within single RNA molecules
    • Akeson, M.; Branton, D.; Kasianowicz, J. J.; Brandin, E.; Deamer, D. W. Microsecond time-scale discrimination among polycytidylic acid, polyadenylic acid, and polyuridylic acid as homopolymers or as segments within single RNA molecules Biophys. J. 1999, 77 (6) 3227-3233
    • (1999) Biophys. J. , vol.77 , Issue.6 , pp. 3227-3233
    • Akeson, M.1    Branton, D.2    Kasianowicz, J.J.3    Brandin, E.4    Deamer, D.W.5
  • 45
    • 0017173727 scopus 로고
    • Molecular structure of a deoxyribose-dinucleotide, sodium thymidylyl-(5′ → 3′)-thymidylate-(5′) hydrate (pTpT), and a possible structural model for polythymidylate
    • Camerman, N.; Fawcett, J. K.; Camerman, A. Molecular structure of a deoxyribose-dinucleotide, sodium thymidylyl-(5′ → 3′)-thymidylate-(5′) hydrate (pTpT), and a possible structural model for polythymidylate J. Mol. Biol. 1976, 107 (4) 601-621
    • (1976) J. Mol. Biol. , vol.107 , Issue.4 , pp. 601-621
    • Camerman, N.1    Fawcett, J.K.2    Camerman, A.3


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