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Volumn 7, Issue 12, 2012, Pages

Diagnostic Peptide Discovery: Prioritization of Pathogen Diagnostic Markers Using Multiple Features

Author keywords

[No Author keywords available]

Indexed keywords

EPITOPE; PARASITE ANTIGEN; PROTOZOAL PROTEIN;

EID: 84871310290     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0050748     Document Type: Article
Times cited : (28)

References (64)
  • 1
    • 80052425835 scopus 로고    scopus 로고
    • Drugs and diagnostic innovations to improve global health
    • xi
    • Peeling RW, Nwaka S, (2011) Drugs and diagnostic innovations to improve global health. Infect Dis Clin North Am 25: 693-705, xi.
    • (2011) Infect Dis Clin North Am , vol.25 , pp. 693-705
    • Peeling, R.W.1    Nwaka, S.2
  • 2
    • 0035061882 scopus 로고    scopus 로고
    • B-Cell epitope mapping of the VapA protein of Rhodococcus equi: implications for early detection of R. equi disease in foals
    • Vanniasinkam T, Barton MD, Heuzenroeder MW, (2001) B-Cell epitope mapping of the VapA protein of Rhodococcus equi: implications for early detection of R. equi disease in foals. J Clin Microbiol 39: 1633-1637.
    • (2001) J Clin Microbiol , vol.39 , pp. 1633-1637
    • Vanniasinkam, T.1    Barton, M.D.2    Heuzenroeder, M.W.3
  • 3
    • 0035190532 scopus 로고    scopus 로고
    • Multiple overlapping epitopes in the repetitive unit of the shed acute-phase antigen from Trypanosoma cruzi enhance its immunogenic properties
    • Alvarez P, Leguizamón MS, Buscaglia CA, Pitcovsky TA, Campetella O, (2001) Multiple overlapping epitopes in the repetitive unit of the shed acute-phase antigen from Trypanosoma cruzi enhance its immunogenic properties. Infect Immun 69: 7946-7949.
    • (2001) Infect Immun , vol.69 , pp. 7946-7949
    • Alvarez, P.1    Leguizamón, M.S.2    Buscaglia, C.A.3    Pitcovsky, T.A.4    Campetella, O.5
  • 4
    • 33746634735 scopus 로고    scopus 로고
    • Mapping of B-cell epitopes on a novel 11.5-kilodalton Fasci-ola hepatica-Schistosoma mansoni cross-reactive antigen belonging to a member of the F. hepatica saposin-like protein family
    • Torres D, Espino AM, (2006) Mapping of B-cell epitopes on a novel 11.5-kilodalton Fasci-ola hepatica-Schistosoma mansoni cross-reactive antigen belonging to a member of the F. hepatica saposin-like protein family. Infect Immun 74: 4932-4938.
    • (2006) Infect Immun , vol.74 , pp. 4932-4938
    • Torres, D.1    Espino, A.M.2
  • 5
    • 62449321935 scopus 로고    scopus 로고
    • Peptide microarrays for serum antibody diagnostics
    • Andresen H, Bier FF, (2009) Peptide microarrays for serum antibody diagnostics. Methods Mol Biol 509: 123-134.
    • (2009) Methods Mol Biol , vol.509 , pp. 123-134
    • Andresen, H.1    Bier, F.F.2
  • 6
    • 0036712071 scopus 로고    scopus 로고
    • Individually addressable parallel peptide synthesis on microchips
    • Pellois JP, Zhou X, Srivannavit O, Zhou T, Gulari E, et al. (2002) Individually addressable parallel peptide synthesis on microchips. Nat Biotechnol 20: 922-926.
    • (2002) Nat Biotechnol , vol.20 , pp. 922-926
    • Pellois, J.P.1    Zhou, X.2    Srivannavit, O.3    Zhou, T.4    Gulari, E.5
  • 7
    • 0025605617 scopus 로고
    • A semi-empirical method for prediction of antigenic determinants on protein antigens
    • Kolaskar AS, Tongaonkar PC, (1990) A semi-empirical method for prediction of antigenic determinants on protein antigens. FEBS Lett 276: 172-174.
    • (1990) FEBS Lett , vol.276 , pp. 172-174
    • Kolaskar, A.S.1    Tongaonkar, P.C.2
  • 8
    • 33751104704 scopus 로고    scopus 로고
    • Improved method for predicting linear B-cell epitopes
    • Larsen JEP, Lund O, Nielsen M, (2006) Improved method for predicting linear B-cell epitopes. Immunome Res 2: 2.
    • (2006) Immunome Res , vol.2 , pp. 2
    • Larsen, J.E.P.1    Lund, O.2    Nielsen, M.3
  • 9
    • 33748254730 scopus 로고    scopus 로고
    • Prediction of continuous B-cell epitopes in an antigen using recurrent neural network
    • Saha S, Raghava GPS, (2006) Prediction of continuous B-cell epitopes in an antigen using recurrent neural network. Proteins 65: 40-48.
    • (2006) Proteins , vol.65 , pp. 40-48
    • Saha, S.1    Raghava, G.P.S.2
  • 10
    • 33751099863 scopus 로고    scopus 로고
    • Prediction of residues in discontinuous B-cell epitopes using protein 3D structures
    • Andersen PH, Nielsen M, Lund O, (2006) Prediction of residues in discontinuous B-cell epitopes using protein 3D structures. Protein Sci 15: 2558-2567.
    • (2006) Protein Sci , vol.15 , pp. 2558-2567
    • Andersen, P.H.1    Nielsen, M.2    Lund, O.3
  • 11
    • 45449086674 scopus 로고    scopus 로고
    • PEPITO: improved discontinuous B-cell epitope prediction using multiple distance thresholds and half sphere exposure
    • Sweredoski MJ, Baldi P, (2008) PEPITO: improved discontinuous B-cell epitope prediction using multiple distance thresholds and half sphere exposure. Bioinformatics 24: 1459-1460.
    • (2008) Bioinformatics , vol.24 , pp. 1459-1460
    • Sweredoski, M.J.1    Baldi, P.2
  • 12
    • 60749128663 scopus 로고    scopus 로고
    • COBEpro: a novel system for predicting continuous B-cell epitopes
    • Sweredoski MJ, Baldi P, (2009) COBEpro: a novel system for predicting continuous B-cell epitopes. Protein Eng Des Sel 22: 113-120.
    • (2009) Protein Eng Des Sel , vol.22 , pp. 113-120
    • Sweredoski, M.J.1    Baldi, P.2
  • 13
  • 14
    • 78649796508 scopus 로고    scopus 로고
    • SVM-based prediction of linear B-cell epitopes using Bayes Feature Extraction
    • Wee LJK, Simarmata D, Kam YW, Ng LFP, Tong JC, (2010) SVM-based prediction of linear B-cell epitopes using Bayes Feature Extraction. BMC Genomics 11 Suppl 4: S21.
    • (2010) BMC Genomics , vol.11 , Issue.SUPPL. 4
    • Wee, L.J.K.1    Simarmata, D.2    Kam, Y.W.3    Ng, L.F.P.4    Tong, J.C.5
  • 15
    • 77954543849 scopus 로고    scopus 로고
    • EPSVR and EPMeta: prediction of antigenic epitopes using support vector regression and multiple server results
    • Liang S, Zheng D, Standley DM, Yao B, Zacharias M, et al. (2010) EPSVR and EPMeta: prediction of antigenic epitopes using support vector regression and multiple server results. BMC Bioinformatics 11: 381.
    • (2010) BMC Bioinformatics , vol.11 , pp. 381
    • Liang, S.1    Zheng, D.2    Standley, D.M.3    Yao, B.4    Zacharias, M.5
  • 16
    • 51949085777 scopus 로고    scopus 로고
    • Immunological dominance of Trypanosoma cruzi tandem repeat proteins
    • Goto Y, Carter D, Reed SG, (2008) Immunological dominance of Trypanosoma cruzi tandem repeat proteins. Infect Immun 76: 3967-3974.
    • (2008) Infect Immun , vol.76 , pp. 3967-3974
    • Goto, Y.1    Carter, D.2    Reed, S.G.3
  • 18
    • 78149275834 scopus 로고    scopus 로고
    • Serodiagnosis of Echinococcus spp. infection: explorative selection of diagnostic antigens by peptide microarray
    • List C, Qi W, Maag E, Gottstein B, Müller N, et al. (2010) Serodiagnosis of Echinococcus spp. infection: explorative selection of diagnostic antigens by peptide microarray. PLoS Negl Trop Dis 4: e771.
    • (2010) PLoS Negl Trop Dis , vol.4
    • List, C.1    Qi, W.2    Maag, E.3    Gottstein, B.4    Müller, N.5
  • 19
    • 84871315216 scopus 로고    scopus 로고
    • WHO Consultation on International Biological Reference Preparations for Chagas Diagnostic Tests. Online. URL http://www.who.int/bloodproducts/ref_materials/ WHO_Report_1st_Chagas_BRP_consultation_7-2007_final.pdf. (Accessed 2012 May 2012).
  • 22
    • 0028216366 scopus 로고
    • A general strategy to identify mimotopes of pathological antigens using only random peptide libraries and human sera
    • Folgori A, Tafi R, Meola A, Felici F, Galfré G, et al. (1994) A general strategy to identify mimotopes of pathological antigens using only random peptide libraries and human sera. EMBO J 13: 2236-2243.
    • (1994) EMBO J , vol.13 , pp. 2236-2243
    • Folgori, A.1    Tafi, R.2    Meola, A.3    Felici, F.4    Galfré, G.5
  • 23
    • 80053899313 scopus 로고    scopus 로고
    • Systems biology approach predicts antibody signature associated with Brucella melitensis infection in humans
    • Liang L, Tan X, Juarez S, Villaverde H, Pablo J, et al. (2011) Systems biology approach predicts antibody signature associated with Brucella melitensis infection in humans. J Proteome Res 10: 4813-4824.
    • (2011) J Proteome Res , vol.10 , pp. 4813-4824
    • Liang, L.1    Tan, X.2    Juarez, S.3    Villaverde, H.4    Pablo, J.5
  • 24
    • 38749115393 scopus 로고    scopus 로고
    • Codon usage suggests that translational selection has a major impact on protein expression in trypanosomatids
    • Horn D, (2008) Codon usage suggests that translational selection has a major impact on protein expression in trypanosomatids. BMC Genomics 9: 2.
    • (2008) BMC Genomics , vol.9 , pp. 2
    • Horn, D.1
  • 25
    • 0037090528 scopus 로고    scopus 로고
    • Life without transcriptional control? From fly to man and back again
    • Clayton CE, (2002) Life without transcriptional control? From fly to man and back again. EMBO J 21: 1881-1888.
    • (2002) EMBO J , vol.21 , pp. 1881-1888
    • Clayton, C.E.1
  • 26
    • 0000448982 scopus 로고
    • Prediction of protein antigenic determinants from amino acid sequences
    • Hopp TP, Woods KR, (1981) Prediction of protein antigenic determinants from amino acid sequences. Proc Natl Acad Sci U S A 78: 3824-3828.
    • (1981) Proc Natl Acad Sci U S A , vol.78 , pp. 3824-3828
    • Hopp, T.P.1    Woods, K.R.2
  • 27
    • 0026350055 scopus 로고
    • Predicting location of continuous epitopes in proteins from their primary structures
    • Pellequer JL, Westhof E, Van Regenmortel MH, (1991) Predicting location of continuous epitopes in proteins from their primary structures. Methods Enzymol 203: 176-201.
    • (1991) Methods Enzymol , vol.203 , pp. 176-201
    • Pellequer, J.L.1    Westhof, E.2    Van Regenmortel, M.H.3
  • 28
    • 0027156564 scopus 로고
    • Correlation between the location of antigenic sites and the prediction of turns in proteins
    • Pellequer JL, Westhof E, Van Regenmortel MH, (1993) Correlation between the location of antigenic sites and the prediction of turns in proteins. Immunol Lett 36: 83-99.
    • (1993) Immunol Lett , vol.36 , pp. 83-99
    • Pellequer, J.L.1    Westhof, E.2    Van Regenmortel, M.H.3
  • 29
    • 0032829397 scopus 로고    scopus 로고
    • Predictive estimation of protein linear epitopes by using the program PEOPLE
    • Alix AJ, (1999) Predictive estimation of protein linear epitopes by using the program PEOPLE. Vaccine 18: 311-314.
    • (1999) Vaccine , vol.18 , pp. 311-314
    • Alix, A.J.1
  • 30
    • 0037263777 scopus 로고    scopus 로고
    • BEPITOPE: predicting the location of continuous epitopes and patterns in proteins
    • Odorico M, Pellequer JL, (2003) BEPITOPE: predicting the location of continuous epitopes and patterns in proteins. J Mol Recognit 16: 20-22.
    • (2003) J Mol Recognit , vol.16 , pp. 20-22
    • Odorico, M.1    Pellequer, J.L.2
  • 31
    • 11144246404 scopus 로고    scopus 로고
    • Benchmarking B cell epitope prediction: underperformance of existing methods
    • Blythe MJ, Flower DR, (2005) Benchmarking B cell epitope prediction: underperformance of existing methods. Protein Sci 14: 246-248.
    • (2005) Protein Sci , vol.14 , pp. 246-248
    • Blythe, M.J.1    Flower, D.R.2
  • 32
    • 28544438391 scopus 로고    scopus 로고
    • AntiJen: a quantitative immunology database integrating functional, thermodynamic, kinetic, biophysical, and cellular data
    • Toseland CP, Clayton DJ, McSparron H, Hemsley SL, Blythe MJ, et al. (2005) AntiJen: a quantitative immunology database integrating functional, thermodynamic, kinetic, biophysical, and cellular data. Immunome Res 1: 4.
    • (2005) Immunome Res , vol.1 , pp. 4
    • Toseland, C.P.1    Clayton, D.J.2    McSparron, H.3    Hemsley, S.L.4    Blythe, M.J.5
  • 33
    • 20044369888 scopus 로고    scopus 로고
    • Profiling the humoral immune response to infection by using proteome microarrays: high-throughput vaccine and diagnostic antigen discovery
    • Davies DH, Liang X, Hernandez JE, Randall A, Hirst S, et al. (2005) Profiling the humoral immune response to infection by using proteome microarrays: high-throughput vaccine and diagnostic antigen discovery. Proc Natl Acad Sci U S A 102: 547-552.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 547-552
    • Davies, D.H.1    Liang, X.2    Hernandez, J.E.3    Randall, A.4    Hirst, S.5
  • 34
    • 57549100397 scopus 로고    scopus 로고
    • Pattern recognition in pulmonary tuberculosis defined by high content peptide microarray chip analysis representing 61 proteins from M. tuberculosis
    • Gaseitsiwe S, Valentini D, Mahdavifar S, Magalhaes I, Hoft DF, et al. (2008) Pattern recognition in pulmonary tuberculosis defined by high content peptide microarray chip analysis representing 61 proteins from M. tuberculosis. PLoS One 3: e3840.
    • (2008) PLoS One , vol.3
    • Gaseitsiwe, S.1    Valentini, D.2    Mahdavifar, S.3    Magalhaes, I.4    Hoft, D.F.5
  • 35
    • 84861740669 scopus 로고    scopus 로고
    • Peptide Microarray Analysis of In Silico-Predicted Epitopes for Serological Diagnosis of Toxoplasma gondii Infection in Humans
    • Maksimov P, Zerweck J, Maksimov A, Hotop A, Groβ U, et al. (2012) Peptide Microarray Analysis of In Silico-Predicted Epitopes for Serological Diagnosis of Toxoplasma gondii Infection in Humans. Clin Vaccine Immunol 19: 865-874.
    • (2012) Clin Vaccine Immunol , vol.19 , pp. 865-874
    • Maksimov, P.1    Zerweck, J.2    Maksimov, A.3    Hotop, A.4    Groß, U.5
  • 36
    • 0027453680 scopus 로고
    • Immunogenicity in mice of tandem repeats of an epitope from herpes simplex gD protein when expressed by recombinant adenovirus vectors
    • Zheng B, Graham FL, Johnson DC, Hanke T, McDermott MR, et al. (1993) Immunogenicity in mice of tandem repeats of an epitope from herpes simplex gD protein when expressed by recombinant adenovirus vectors. Vaccine 11: 1191-1198.
    • (1993) Vaccine , vol.11 , pp. 1191-1198
    • Zheng, B.1    Graham, F.L.2    Johnson, D.C.3    Hanke, T.4    McDermott, M.R.5
  • 37
    • 0342437101 scopus 로고    scopus 로고
    • Tandem repeats of T helper epitopes enhance immunogenicity of fusion proteins by promoting processing and presentation
    • Kjerrulf M, Löwenadler B, Svanholm C, Lycke N, (1997) Tandem repeats of T helper epitopes enhance immunogenicity of fusion proteins by promoting processing and presentation. Mol Immunol 34: 599-608.
    • (1997) Mol Immunol , vol.34 , pp. 599-608
    • Kjerrulf, M.1    Löwenadler, B.2    Svanholm, C.3    Lycke, N.4
  • 39
    • 33744542514 scopus 로고    scopus 로고
    • Ten tandem repeats of beta-hCG 109-118 enhance immunogenicity and anti-tumor effects of beta-hCG C-terminal peptide carried by mycobacterial heat-shock protein HSP65
    • Yankai Z, Rong Y, Yi H, Wentao L, Rongyue C, et al. (2006) Ten tandem repeats of beta-hCG 109-118 enhance immunogenicity and anti-tumor effects of beta-hCG C-terminal peptide carried by mycobacterial heat-shock protein HSP65. Biochem Biophys Res Commun 345: 1365-1371.
    • (2006) Biochem Biophys Res Commun , vol.345 , pp. 1365-1371
    • Yankai, Z.1    Rong, Y.2    Yi, H.3    Wentao, L.4    Rongyue, C.5
  • 40
    • 0026633063 scopus 로고
    • Sequence of the gene for a Trypanosoma cruzi protein antigenic during the chronic phase of human Chagas disease
    • Buschiazzo A, Campetella OE, Macina RA, Salceda S, Frasch AC, et al. (1992) Sequence of the gene for a Trypanosoma cruzi protein antigenic during the chronic phase of human Chagas disease. Mol Biochem Parasitol 54: 125-128.
    • (1992) Mol Biochem Parasitol , vol.54 , pp. 125-128
    • Buschiazzo, A.1    Campetella, O.E.2    Macina, R.A.3    Salceda, S.4    Frasch, A.C.5
  • 42
    • 78049304049 scopus 로고    scopus 로고
    • The self/nonself issue: A confrontation between proteomes
    • Kanduc D, (2010) The self/nonself issue: A confrontation between proteomes. Self Nonself 1: 255-258.
    • (2010) Self Nonself , vol.1 , pp. 255-258
    • Kanduc, D.1
  • 43
    • 79952417222 scopus 로고    scopus 로고
    • Genome-wide identification of molecular mimicry candidates in parasites
    • Ludin P, Nilsson D, Mäser P, (2011) Genome-wide identification of molecular mimicry candidates in parasites. PLoS One 6: e17546.
    • (2011) PLoS One , vol.6
    • Ludin, P.1    Nilsson, D.2    Mäser, P.3
  • 44
    • 0026454688 scopus 로고
    • SAPA/trans-sialidase and cruzipain: two antigens from Try-panosoma cruzi contain immunodominant but enzymatically inactive domains
    • Cazzulo JJ, Frasch AC, (1992) SAPA/trans-sialidase and cruzipain: two antigens from Try-panosoma cruzi contain immunodominant but enzymatically inactive domains. FASEB J 6: 3259-3264.
    • (1992) FASEB J , vol.6 , pp. 3259-3264
    • Cazzulo, J.J.1    Frasch, A.C.2
  • 46
    • 0032124920 scopus 로고    scopus 로고
    • Mapping of B cell epitopes in an immunodominant antigen of Trypanosoma cruzi using fusions to the Escherichia coli LamB protein
    • Pereira CM, Yamauchi LM, Levin MJ, da Silveira JF, Castilho BA, (1998) Mapping of B cell epitopes in an immunodominant antigen of Trypanosoma cruzi using fusions to the Escherichia coli LamB protein. FEMS Microbiol Lett 164: 125-131.
    • (1998) FEMS Microbiol Lett , vol.164 , pp. 125-131
    • Pereira, C.M.1    Yamauchi, L.M.2    Levin, M.J.3    da Silveira, J.F.4    Castilho, B.A.5
  • 47
    • 0033008588 scopus 로고    scopus 로고
    • A multiepitopesynthetic peptide and recombinant protein for the detection of antibodies to Try-panosoma cruzi in radioimmunoprecipitation-confirmed and consensus-positive sera
    • Houghton RL, Benson DR, Reynolds LD, McNeill PD, Sleath PR, et al. (1999) A multiepitopesynthetic peptide and recombinant protein for the detection of antibodies to Try-panosoma cruzi in radioimmunoprecipitation-confirmed and consensus-positive sera. J Infect Dis 179: 1226-1234.
    • (1999) J Infect Dis , vol.179 , pp. 1226-1234
    • Houghton, R.L.1    Benson, D.R.2    Reynolds, L.D.3    McNeill, P.D.4    Sleath, P.R.5
  • 50
    • 14844342815 scopus 로고    scopus 로고
    • The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins
    • Dosztányi Z, Csizmók V, Tompa P, Simon I, (2005) The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins. J Mol Biol 347: 827-839.
    • (2005) J Mol Biol , vol.347 , pp. 827-839
    • Dosztányi, Z.1    Csizmók, V.2    Tompa, P.3    Simon, I.4
  • 51
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: the European Molecular Biology Open Software Suite
    • Rice P, Longden I, Bleasby A, (2000) EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 16: 276-277.
    • (2000) Trends Genet , vol.16 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 52
    • 20444451594 scopus 로고    scopus 로고
    • Tracking repeats using significance and transitivity
    • Szklarczyk R, Heringa J, (2004) Tracking repeats using significance and transitivity. Bioinformatics 20 Suppl 1: i311-i317.
    • (2004) Bioinformatics , vol.20 , Issue.SUPPL. 1
    • Szklarczyk, R.1    Heringa, J.2
  • 54
    • 84871340236 scopus 로고    scopus 로고
    • Kronegg J, Bouloz D (1999) Detection/prediction of GPI cleavage site (GPI-anchor) in a protein (DGPI). URL http://dgpi.pathbot.com. Last accessed: 2008.
  • 55
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes
    • Krogh A, Larsson B, Heijne Gv, Sonnhammer EL, (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol 305: 567-580.
    • (2001) J Mol Biol , vol.305 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    Heijne G.Sonnhammer, E.L.3
  • 56
    • 13644257223 scopus 로고    scopus 로고
    • Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites
    • Julenius K, Mølgaard A, Gupta R, Brunak S, (2005) Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites. Glycobiology 15: 153-164.
    • (2005) Glycobiology , vol.15 , pp. 153-164
    • Julenius, K.1    Mølgaard, A.2    Gupta, R.3    Brunak, S.4
  • 57
    • 0028501914 scopus 로고
    • Non-globular domains in protein sequences: automated segmentation using complexity measures
    • Wootton JC, (1994) Non-globular domains in protein sequences: automated segmentation using complexity measures. Comput Chem 18: 269-85.
    • (1994) Comput Chem , vol.18 , pp. 269-285
    • Wootton, J.C.1
  • 58
    • 0141519279 scopus 로고    scopus 로고
    • OrthoMCL: identification of ortholog groups for eukaryotic genomes
    • Li L, Stoeckert CJ, Roos DS, (2003) OrthoMCL: identification of ortholog groups for eukaryotic genomes. Genome Res 13: 2178-2189.
    • (2003) Genome Res , vol.13 , pp. 2178-2189
    • Li, L.1    Stoeckert, C.J.2    Roos, D.S.3
  • 59
    • 33644787447 scopus 로고    scopus 로고
    • OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups
    • Chen F, Mackey AJ, Stoeckert CJ, Roos DS, (2006) OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups. Nucleic Acids Res 34: D363-D368.
    • (2006) Nucleic Acids Res , vol.34
    • Chen, F.1    Mackey, A.J.2    Stoeckert, C.J.3    Roos, D.S.4
  • 60
    • 58149204065 scopus 로고    scopus 로고
    • TcSNP: a database of genetic variation in Trypanosoma cruzi
    • Ackermann AA, Carmona SJ, Agüero F, (2009) TcSNP: a database of genetic variation in Trypanosoma cruzi. Nucleic Acids Res 37: D544-D549.
    • (2009) Nucleic Acids Res , vol.37
    • Ackermann, A.A.1    Carmona, S.J.2    Agüero, F.3
  • 61
    • 0023650543 scopus 로고
    • The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications
    • Sharp PM, Li WH, (1987) The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res 15: 1281-1295.
    • (1987) Nucleic Acids Res , vol.15 , pp. 1281-1295
    • Sharp, P.M.1    Li, W.H.2
  • 62
    • 0025272240 scopus 로고
    • Rapid and sensitive sequence comparison with FASTP and FASTA
    • Pearson WR, (1990) Rapid and sensitive sequence comparison with FASTP and FASTA. Methods Enzymol 183: 63-98.
    • (1990) Methods Enzymol , vol.183 , pp. 63-98
    • Pearson, W.R.1
  • 63
    • 0024583134 scopus 로고
    • Identification of a Trypanosoma cruzi antigen that is shed during the acute phase of Chagas' disease
    • Affranchino JL, Ibañez CF, Luquetti AO, Rassi A, Reyes MB, et al. (1989) Identification of a Trypanosoma cruzi antigen that is shed during the acute phase of Chagas' disease. Mol Biochem Parasitol 34: 221-8.
    • (1989) Mol Biochem Parasitol , vol.34 , pp. 221-228
    • Affranchino, J.L.1    Ibañez, C.F.2    Luquetti, A.O.3    Rassi, A.4    Reyes, M.B.5


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