-
1
-
-
0025294528
-
Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations
-
Amann RI, et al. 1990. Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. App. Environ. Microbiol. 56:1919 -1925.
-
(1990)
App. Environ. Microbiol.
, vol.56
, pp. 1919-1925
-
-
Amann, R.I.1
-
2
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann RI, Ludwig W, Schleifer KH. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:143-169.
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.H.3
-
3
-
-
33748799671
-
New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras
-
Ashelford KE, Chuzhanova NA, Fry JC, Jones AJ, Weightman AJ. 2006. New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras. App. Environ. Microbiol. 72:5734 -5741.
-
(2006)
App. Environ. Microbiol.
, vol.72
, pp. 5734-5741
-
-
Ashelford, K.E.1
Chuzhanova, N.A.2
Fry, J.C.3
Jones, A.J.4
Weightman, A.J.5
-
4
-
-
0037447834
-
Microbial communities in acid mine drainage
-
Baker BJ, Banfield JF. 2003. Microbial communities in acid mine drainage. FEMS Microbiol. Ecol. 44:139 -152.
-
(2003)
FEMS Microbiol. Ecol.
, vol.44
, pp. 139-152
-
-
Baker, B.J.1
Banfield, J.F.2
-
5
-
-
77952691194
-
Enigmatic, ultra-small, uncultivated Archaea
-
Baker BJ, et al. 2010. Enigmatic, ultra-small, uncultivated Archaea. Proc. Natl. Acad. Sci. U. S. A. 107:8806-8811.
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 8806-8811
-
-
Baker, B.J.1
-
6
-
-
33845898858
-
Lineages of acidophilic archaea revealed by community genomic analysis
-
Baker BJ, et al. 2006. Lineages of acidophilic archaea revealed by community genomic analysis. Science 314:1933-1935.
-
(2006)
Science
, vol.314
, pp. 1933-1935
-
-
Baker, B.J.1
-
7
-
-
79959576957
-
Quantitative proteomic analyses of the response of acidophilic microbial communities to different pH conditions
-
Belnap CP, et al. 2011. Quantitative proteomic analyses of the response of acidophilic microbial communities to different pH conditions. ISME J. 5:1152-1161.
-
(2011)
ISME J
, vol.5
, pp. 1152-1161
-
-
Belnap, C.P.1
-
8
-
-
77950063427
-
Cultivation and quantitative proteomic analyses of acidophilic microbial communities
-
Belnap CP, et al. 2010. Cultivation and quantitative proteomic analyses of acidophilic microbial communities. ISME J. 4:520 -530.
-
(2010)
ISME J
, vol.4
, pp. 520-530
-
-
Belnap, C.P.1
-
9
-
-
0034992824
-
Design and performance of rRNA targeted oligonucleotide probes for in situ detection and phylogenetic identification of microorganisms inhabiting acid mine drainage environments
-
Bond PL, Banfield JF. 2001. Design and performance of rRNA targeted oligonucleotide probes for in situ detection and phylogenetic identification of microorganisms inhabiting acid mine drainage environments. Microb. Ecol. 41:149 -161.
-
(2001)
Microb. Ecol.
, vol.41
, pp. 149-161
-
-
Bond, P.L.1
Banfield, J.F.2
-
10
-
-
0033754225
-
Comparison of acid mine drainage microbial communities in physically and geochemically distinct ecosystems
-
Bond PL, Druschel GK, Banfield JF. 2000. Comparison of acid mine drainage microbial communities in physically and geochemically distinct ecosystems. App. Environ. Microbiol. 66:4962- 4971.
-
(2000)
App. Environ. Microbiol.
, vol.66
, pp. 4962-4971
-
-
Bond, P.L.1
Druschel, G.K.2
Banfield, J.F.3
-
11
-
-
46149122969
-
Archaeal diversity in a Fe-As rich acid mine drainage at Carnoules (France)
-
Bruneel O, et al. 2008. Archaeal diversity in a Fe-As rich acid mine drainage at Carnoules (France). Extremophiles 12:563-571.
-
(2008)
Extremophiles
, vol.12
, pp. 563-571
-
-
Bruneel, O.1
-
12
-
-
33746344019
-
Reaction mechanism of deamidation of asparaginyl residues in peptides: effect of solvent molecules
-
Catak S, Monard G, Aviyente V, Ruiz-Lopez MF. 2006. Reaction mechanism of deamidation of asparaginyl residues in peptides: effect of solvent molecules. J. Phys. Chem. A 110:8354-8365.
-
(2006)
J. Phys. Chem. A
, vol.110
, pp. 8354-8365
-
-
Catak, S.1
Monard, G.2
Aviyente, V.3
Ruiz-Lopez, M.F.4
-
13
-
-
58549108582
-
Three-dimensional analysis of the structure and ecology of a novel, ultrasmall archaeon
-
Comolli LR, Baker BJ, Downing KH, Siegerist CE, Banfield JF. 2009. Three-dimensional analysis of the structure and ecology of a novel, ultrasmall archaeon. ISME J. 3:159 -167.
-
(2009)
ISME J
, vol.3
, pp. 159-167
-
-
Comolli, L.R.1
Baker, B.J.2
Downing, K.H.3
Siegerist, C.E.4
Banfield, J.F.5
-
14
-
-
0344172842
-
The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set
-
Daims H, Bruhl A, Amann R, Schleifer KH, Wagner M. 1999. The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set. Syst. Appl. Microbiol. 22:434-444.
-
(1999)
Syst. Appl. Microbiol.
, vol.22
, pp. 434-444
-
-
Daims, H.1
Bruhl, A.2
Amann, R.3
Schleifer, K.H.4
Wagner, M.5
-
15
-
-
31544483932
-
Community genomics among stratified microbial assemblages in the ocean's interior
-
DeLong EF, et al. 2006. Community genomics among stratified microbial assemblages in the ocean's interior. Science 311:496 -503.
-
(2006)
Science
, vol.311
, pp. 496-503
-
-
DeLong, E.F.1
-
16
-
-
84860160394
-
In situ evolutionary rate measurements show ecological success of recently emerged bacterial hybrids
-
Denef VJ, Banfield JF. 2012. In situ evolutionary rate measurements show ecological success of recently emerged bacterial hybrids. Science 336:462-466.
-
(2012)
Science
, vol.336
, pp. 462-466
-
-
Denef, V.J.1
Banfield, J.F.2
-
17
-
-
77951498518
-
AMD biofilms: using model communities to study microbial evolution and ecological complexity in nature
-
Denef VJ, Mueller RS, Banfield J. 2010. AMD biofilms: using model communities to study microbial evolution and ecological complexity in nature. ISME J. 4:599-610.
-
(2010)
ISME J
, vol.4
, pp. 599-610
-
-
Denef, V.J.1
Mueller, R.S.2
Banfield, J.3
-
18
-
-
58549091696
-
Proteomics-inferred genome typing (PIGT) demonstrates inter-population recombination as a strategy for environmental adaptation
-
Denef VJ, et al. 2009. Proteomics-inferred genome typing (PIGT) demonstrates inter-population recombination as a strategy for environmental adaptation. Environ. Microbiol. 11:313-325.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 313-325
-
-
Denef, V.J.1
-
19
-
-
70350015324
-
Community-wide analysis of microbial genome sequence signatures
-
Dick GJ, et al. 2009. Community-wide analysis of microbial genome sequence signatures. Genome Biol. 10:R85.
-
(2009)
Genome Biol
, vol.10
-
-
Dick, G.J.1
-
20
-
-
33846143212
-
Towards determining details of anaerobic growth coupled to ferric iron reduction by the acidophilic archaeon "Ferroplasma acidarmanus" Fer1
-
Dopson M, Baker-Austin C, Bond P. 2007. Towards determining details of anaerobic growth coupled to ferric iron reduction by the acidophilic archaeon "Ferroplasma acidarmanus" Fer1. Extremophiles 11:159 -168.
-
(2007)
Extremophiles
, vol.11
, pp. 159-168
-
-
Dopson, M.1
Baker-Austin, C.2
Bond, P.3
-
21
-
-
3242771843
-
Characterization of Ferroplasma isolates and Ferroplasma acidarmanus sp. nov., extreme acidophiles from acid mine drainage and industrial bioleaching environments
-
Dopson M, Baker-Austin C, Hind A, Bowman JP, Bond PL. 2004. Characterization of Ferroplasma isolates and Ferroplasma acidarmanus sp. nov., extreme acidophiles from acid mine drainage and industrial bioleaching environments. App. Environ. Microbiol. 70:2079 -2088.
-
(2004)
App. Environ. Microbiol.
, vol.70
, pp. 2079-2088
-
-
Dopson, M.1
Baker-Austin, C.2
Hind, A.3
Bowman, J.P.4
Bond, P.L.5
-
22
-
-
19144366548
-
Acid mine drainage biogeochemistry at Iron Mountain California
-
Druschel GK, Baker BJ, Gihring TM, Banfield JF. 2004. Acid mine drainage biogeochemistry at Iron Mountain, California. Geochem. Trans. 5:13-32.
-
(2004)
Geochem. Trans.
, vol.5
, pp. 13-32
-
-
Druschel, G.K.1
Baker, B.J.2
Gihring, T.M.3
Banfield, J.F.4
-
23
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar RC. 2010. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26:2460 -2461.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
24
-
-
0033831984
-
Geochemical and biological aspects of sulfide mineral dissolution: lessons from Iron Mountain
-
Edwards KJ, et al. 2000. Geochemical and biological aspects of sulfide mineral dissolution: lessons from Iron Mountain, California. Chem. Geol. 169:383-397.
-
(2000)
California. Chem. Geol.
, vol.169
, pp. 383-397
-
-
Edwards, K.J.1
-
25
-
-
0034629254
-
An archaeal iron-oxidizing extreme acidophile important in acid mine drainage
-
Edwards KJ, Bond PL, Gihring TM, Banfield JF. 2000. An archaeal iron-oxidizing extreme acidophile important in acid mine drainage. Science 287:1796 -1799.
-
(2000)
Science
, vol.287
, pp. 1796-1799
-
-
Edwards, K.J.1
Bond, P.L.2
Gihring, T.M.3
Banfield, J.F.4
-
26
-
-
0000857494
-
An approach to correlate tandem mass-spectral data of peptides with amino-acid-sequences in a protein database
-
Eng JK, McCormack AL, Yates JR. 1994. An approach to correlate tandem mass-spectral data of peptides with amino-acid-sequences in a protein database. J. Am. Soc. Mass Spectrom. 5:976 -989.
-
(1994)
J. Am. Soc. Mass Spectrom.
, vol.5
, pp. 976-989
-
-
Eng, J.K.1
McCormack, A.L.2
Yates, J.R.3
-
27
-
-
33750699996
-
Analyzing chromatin remodeling complexes using shotgun proteomics and normalized spectral abundance factors
-
Florens L, et al. 2006. Analyzing chromatin remodeling complexes using shotgun proteomics and normalized spectral abundance factors. Methods 40:303-311.
-
(2006)
Methods
, vol.40
, pp. 303-311
-
-
Florens, L.1
-
28
-
-
67649576309
-
Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing "Leptospirillum rubarum" (group II) and "Leptospirillum ferrodiazotrophum" (group III) bacteria in acid mine drainage biofilms
-
Goltsman DSA, et al. 2009. Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing "Leptospirillum rubarum" (group II) and "Leptospirillum ferrodiazotrophum" (group III) bacteria in acid mine drainage biofilms. App. Environ. Microbiol. 75:4599-4615.
-
(2009)
App. Environ. Microbiol.
, vol.75
, pp. 4599-4615
-
-
Goltsman, D.S.A.1
-
29
-
-
17144438252
-
Ferroplasma acidiphilum gen. nov., sp. nov., an acidophilic, autotrophic, ferrous-iron-oxidizing, cell-wall-lacking, mesophilic member of the Ferroplasmaceae fam. nov., comprising a distinct lineage of the Archaea
-
Golyshina OV, et al. 2000. Ferroplasma acidiphilum gen. nov., sp. nov., an acidophilic, autotrophic, ferrous-iron-oxidizing, cell-wall-lacking, mesophilic member of the Ferroplasmaceae fam. nov., comprising a distinct lineage of the Archaea. Int. J. Syst. Evol. Microbiol. 50:997-1006.
-
(2000)
Int. J. Syst. Evol. Microbiol.
, vol.50
, pp. 997-1006
-
-
Golyshina, O.V.1
-
30
-
-
70350294348
-
Systematic artifacts in metagenomes from complex microbial communities
-
Gomez-Alvarez V, Teal TK, Schmidt TM. 2009. Systematic artifacts in metagenomes from complex microbial communities. ISME J. 3:1314- 1317.
-
(2009)
ISME J
, vol.3
, pp. 1314-1317
-
-
Gomez-Alvarez, V.1
Teal, T.K.2
Schmidt, T.M.3
-
31
-
-
0033614388
-
Methane-consuming archaebacteria in marine sediments
-
Hinrichs KU, Hayes JM, Sylva SP, Brewer PG, DeLong EF. 1999. Methane-consuming archaebacteria in marine sediments. Nature 398: 802-805.
-
(1999)
Nature
, vol.398
, pp. 802-805
-
-
Hinrichs, K.U.1
Hayes, J.M.2
Sylva, S.P.3
Brewer, P.G.4
DeLong, E.F.5
-
32
-
-
45549103517
-
A dicarboxylate/4-hydroxybutyrate autotrophic carbon assimilation cycle in the hyperthermophilic archaeum Ignicoccus hospitalis
-
Huber H, et al. 2008. A dicarboxylate/4-hydroxybutyrate autotrophic carbon assimilation cycle in the hyperthermophilic archaeum Ignicoccus hospitalis. Proc. Natl. Acad. Sci. U. S. A. 105:7851-7856.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 7851-7856
-
-
Huber, H.1
-
33
-
-
78149423315
-
Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function
-
doi: 10.1371/journal. pone.0009773
-
Inskeep WP, et al. 2010. Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function. PLoS One 5:e9773. doi:10.1371/journal. pone.0009773.
-
(2010)
PLoS One
, vol.5
-
-
Inskeep, W.P.1
-
34
-
-
48749094780
-
Dominance of putative marine benthic Archaea in Qinghai Lake, north-western China
-
Jiang H, et al. 2008. Dominance of putative marine benthic Archaea in Qinghai Lake, north-western China. Environ. Microbiol. 10:2355-2367.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 2355-2367
-
-
Jiang, H.1
-
35
-
-
56149117000
-
Sulfobacillus benefaciens sp. nov., an acidophilic facultative anaerobic Firmicute isolated from mineral bioleaching operations
-
Johnson DB, Joulian C, d'Hugues P, Hallberg KB. 2008. Sulfobacillus benefaciens sp. nov., an acidophilic facultative anaerobic Firmicute isolated from mineral bioleaching operations. Extremophiles 12:789 -798.
-
(2008)
Extremophiles
, vol.12
, pp. 789-798
-
-
Johnson, D.B.1
Joulian, C.2
d'Hugues, P.3
Hallberg, K.B.4
-
36
-
-
0036833518
-
The relative rates of glutamine and asparagine deamidation in glucagon fragment 22-29 under acidic conditions
-
Joshi AB, Kirsch LE. 2002. The relative rates of glutamine and asparagine deamidation in glucagon fragment 22-29 under acidic conditions. J. Pharma. Sci. 91:2332-2345.
-
(2002)
J. Pharma. Sci.
, vol.91
, pp. 2332-2345
-
-
Joshi, A.B.1
Kirsch, L.E.2
-
37
-
-
0037100671
-
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
-
Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30:3059 -3066.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.3
Miyata, T.4
-
38
-
-
50049127889
-
Quantitative microbial community analysis of three different sulfidic mine tailing dumps generating acid mine drainage
-
Kock D, Schippers A. 2008. Quantitative microbial community analysis of three different sulfidic mine tailing dumps generating acid mine drainage. App. Environ. Microbiol. 74:5211-5219.
-
(2008)
App. Environ. Microbiol.
, vol.74
, pp. 5211-5219
-
-
Kock, D.1
Schippers, A.2
-
39
-
-
34247233535
-
Extremely acidic, pendulous cave wall biofilms from the Frasassi cave system
-
Macalady JL, Jones DS, Lyon EH. 2007. Extremely acidic, pendulous cave wall biofilms from the Frasassi cave system, Italy. Environ. Microbiol. 9:1402-1414.
-
(2007)
Italy. Environ. Microbiol.
, vol.9
, pp. 1402-1414
-
-
Macalady, J.L.1
Jones, D.S.2
Lyon, E.H.3
-
40
-
-
8744242152
-
Tetraether-linked membrane monolayers in Ferroplasma spp: a key to survival in acid
-
Macalady JL, et al. 2004. Tetraether-linked membrane monolayers in Ferroplasma spp: a key to survival in acid. Extremophiles 8:411- 419.
-
(2004)
Extremophiles
, vol.8
, pp. 411-419
-
-
Macalady, J.L.1
-
41
-
-
63349088137
-
Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation
-
Mouser PJ, et al. 2009. Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation. ISME J. 3:454-465.
-
(2009)
ISME J
, vol.3
, pp. 454-465
-
-
Mouser, P.J.1
-
42
-
-
77953272819
-
Ecological distribution and population physiology defined by proteomics in a natural microbial community
-
Mueller RS, et al. 2010. Ecological distribution and population physiology defined by proteomics in a natural microbial community. Mol. Syst. Biol. 6:374.
-
(2010)
Mol. Syst. Biol.
, vol.6
, pp. 374
-
-
Mueller, R.S.1
-
43
-
-
79958053971
-
Microbial ecology of the dark ocean above, at, and below the seafloor
-
Orcutt BN, Sylvan JB, Knab NJ, Edwards KJ. 2011. Microbial ecology of the dark ocean above, at, and below the seafloor. Microbiol. Mol. Biol. Rev. 75:361- 422.
-
(2011)
Microbiol. Mol. Biol. Rev.
, vol.75
, pp. 361-422
-
-
Orcutt, B.N.1
Sylvan, J.B.2
Knab, N.J.3
Edwards, K.J.4
-
44
-
-
0036192263
-
Molecular ecology of extremely halophilic Archaea and Bacteria
-
Oren A. 2002. Molecular ecology of extremely halophilic Archaea and Bacteria. FEMS Microbiol. Ecol. 39:1-7.
-
(2002)
FEMS Microbiol. Ecol.
, vol.39
, pp. 1-7
-
-
Oren, A.1
-
45
-
-
21344465408
-
Community proteomics of a natural microbial biofilm
-
Ram RJ, et al. 2005. Community proteomics of a natural microbial biofilm. Science 308:1915-1920.
-
(2005)
Science
, vol.308
, pp. 1915-1920
-
-
Ram, R.J.1
-
46
-
-
0036405454
-
Heavy metal mining using microbes
-
Rawlings DE. 2002. Heavy metal mining using microbes. Annu. Rev. Microbiol. 56:65-91.
-
(2002)
Annu. Rev. Microbiol.
, vol.56
, pp. 65-91
-
-
Rawlings, D.E.1
-
47
-
-
84870803342
-
-
R Development Core Team. R: a language and environment for statistical computing. R Development Core Team, Vienna, Austria
-
R Development Core Team. 2010. R: a language and environment for statistical computing. R Development Core Team, Vienna, Austria.
-
(2010)
-
-
-
49
-
-
33747894577
-
TM4 microarray software suite
-
Saeed AI, et al. 2006. TM4 microarray software suite. Methods Enzymol. 411:134 -193.
-
(2006)
Methods Enzymol
, vol.411
, pp. 134-193
-
-
Saeed, A.I.1
-
50
-
-
0037311919
-
TM4: a free, open-source system for microarray data management and analysis
-
Saeed AI, et al. 2003. TM4: a free, open-source system for microarray data management and analysis. Biotechniques 34:374 -378.
-
(2003)
Biotechniques
, vol.34
, pp. 374-378
-
-
Saeed, A.I.1
-
51
-
-
80052719172
-
Microbial diversity in anaerobic sediments at Rio Tinto, a naturally acidic environment with a high heavy metal content
-
Sanchez-Andrea I, Rodriguez N, Amils R, Luis Sanz J. 2011. Microbial diversity in anaerobic sediments at Rio Tinto, a naturally acidic environment with a high heavy metal content. App. Environ. Microbiol. 77:6085-6093.
-
(2011)
App. Environ. Microbiol.
, vol.77
, pp. 6085-6093
-
-
Sanchez-Andrea, I.1
Rodriguez, N.2
Amils, R.3
Luis Sanz, J.4
-
53
-
-
11144313963
-
Thermoplasma acidophilum and Thermoplasma volcanium sp. nov. from solfatara fields
-
Segerer A, Langworthy TA, Stetter KO. 1988. Thermoplasma acidophilum and Thermoplasma volcanium sp. nov. from solfatara fields. Syst. Appl. Microbiol. 10:161-171.
-
(1988)
Syst. Appl. Microbiol.
, vol.10
, pp. 161-171
-
-
Segerer, A.1
Langworthy, T.A.2
Stetter, K.O.3
-
54
-
-
0016818803
-
Polypeptide nature of growth requirement in yeast extract for Thermoplasma acidophilum
-
Smith PF, Langworthy TA, Smith MR. 1975. Polypeptide nature of growth requirement in yeast extract for Thermoplasma acidophilum. J. Bacteriol. 124:884-892.
-
(1975)
J. Bacteriol.
, vol.124
, pp. 884-892
-
-
Smith, P.F.1
Langworthy, T.A.2
Smith, M.R.3
-
55
-
-
33847670407
-
Ferrozine: a new spectrophotometric reagent for iron
-
Stookey LL. 1970. Ferrozine: a new spectrophotometric reagent for iron. Anal. Chem. 42:779 -781.
-
(1970)
Anal. Chem.
, vol.42
, pp. 779-781
-
-
Stookey, L.L.1
-
56
-
-
0036393898
-
DTASelect and contrast: tools for assembling and comparing protein identifications from shotgun proteomics
-
Tabb DL, McDonald WH, Yates JR. 2002. DTASelect and contrast: tools for assembling and comparing protein identifications from shotgun proteomics. J. Proteome Res. 1:21-26.
-
(2002)
J. Proteome Res.
, vol.1
, pp. 21-26
-
-
Tabb, D.L.1
McDonald, W.H.2
Yates, J.R.3
-
57
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K, et al. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28:2731-2739.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
-
58
-
-
50649094685
-
Culturable and molecular phylogenetic diversity of microorganisms in an open-dumped, extremely acidic Pb/Zn mine tailings
-
Tan GL, et al. 2008. Culturable and molecular phylogenetic diversity of microorganisms in an open-dumped, extremely acidic Pb/Zn mine tailings. Extremophiles 12:657- 664.
-
(2008)
Extremophiles
, vol.12
, pp. 657-664
-
-
Tan, G.L.1
-
59
-
-
1542377296
-
Community structure and metabolism through reconstruction of microbial genomes from the environment
-
Tyson GW, et al. 2004. Community structure and metabolism through reconstruction of microbial genomes from the environment. Nature 428: 37-43.
-
(2004)
Nature
, vol.428
, pp. 37-43
-
-
Tyson, G.W.1
-
60
-
-
64849115804
-
Digital PCR provides sensitive and absolute calibration for high throughput sequencing
-
doi: 10.1186/1471-2164-10-116
-
White RA, Blainey PC, Fan HC, Quake SR. 2009. Digital PCR provides sensitive and absolute calibration for high throughput sequencing. BMC Genomics 10:116. doi:10.1186/1471-2164-10-116.
-
(2009)
BMC Genomics
, vol.10
, pp. 116
-
-
White, R.A.1
Blainey, P.C.2
Fan, H.C.3
Quake, S.R.4
-
61
-
-
58549114486
-
Natural acidophilic biofilm communities reflect distinct organismal and functional organization
-
Wilmes P, et al. 2009. Natural acidophilic biofilm communities reflect distinct organismal and functional organization. ISME J. 3:266 -270.
-
(2009)
ISME J
, vol.3
, pp. 266-270
-
-
Wilmes, P.1
-
62
-
-
80055092787
-
A semi-quantitative synteny-based method to improve functional predictions for hypothetical and poorly annotated bacterial and archaeal genes
-
doi: 10.1371/journal.pcbi.1002230
-
Yelton AP, et al. 2011. A semi-quantitative, synteny-based method to improve functional predictions for hypothetical and poorly annotated bacterial and archaeal genes PLoS Comput. Biol. 7:e1002230. doi:10.1371/ journal.pcbi.1002230.
-
(2011)
PLoS Comput Biol
, vol.7
-
-
Yelton, A.P.1
|