-
2
-
-
34547275473
-
Brownian motion in a field of force and the diffusion model of chemical reactions
-
Kramers HA (1940) Brownian motion in a field of force and the diffusion model of chemical reactions. Physica 7(4):284-304.
-
(1940)
Physica
, vol.7
, Issue.4
, pp. 284-304
-
-
Kramers, H.A.1
-
3
-
-
0347193736
-
Reaction-rate theory: Fifty years after Kramers
-
Hänggi P, Talkner P, Borkovec M (1990) Reaction-rate theory: Fifty years after Kramers. Rev Mod Phys 62(2):251-341.
-
(1990)
Rev Mod Phys
, vol.62
, Issue.2
, pp. 251-341
-
-
Hänggi, P.1
Talkner, P.2
Borkovec, M.3
-
4
-
-
0004715833
-
On the application of Kramers' theory to elementary chemical reactions
-
Troe J (1991) On the application of Kramers' theory to elementary chemical reactions. Ber Bunsenges Phys Chem 95(3):228-232.
-
(1991)
Ber Bunsenges Phys Chem
, vol.95
, Issue.3
, pp. 228-232
-
-
Troe, J.1
-
5
-
-
0000399469
-
Viscosity dependence of the folding rates of proteins
-
Klimov D, Thirumalai D (1997) Viscosity dependence of the folding rates of proteins. Phys Rev Lett 79(2):317-320.
-
(1997)
Phys Rev Lett
, vol.79
, Issue.2
, pp. 317-320
-
-
Klimov, D.1
Thirumalai, D.2
-
6
-
-
0021796467
-
Rate theories and puzzles of hemeprotein kinetics
-
Frauenfelder H, Wolynes PG (1985) Rate theories and puzzles of hemeprotein kinetics. Science 229(4711):337-345.
-
(1985)
Science
, vol.229
, Issue.4711
, pp. 337-345
-
-
Frauenfelder, H.1
Wolynes, P.G.2
-
7
-
-
0032506017
-
Limited internal friction in the rate-limiting step of a twostate protein folding reaction
-
Plaxco KW, Baker D (1998) Limited internal friction in the rate-limiting step of a twostate protein folding reaction. Proc Natl Acad Sci USA 95(23):13591-13596.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, Issue.23
, pp. 13591-13596
-
-
Plaxco, K.W.1
Baker, D.2
-
8
-
-
77957916566
-
Solvent viscosity and friction in protein folding dynamics
-
Hagen SJ (2010) Solvent viscosity and friction in protein folding dynamics. Curr Protein Pept Sci 11(5):385-395.
-
(2010)
Curr Protein Pept Sci
, vol.11
, Issue.5
, pp. 385-395
-
-
Hagen, S.J.1
-
9
-
-
0026636807
-
The role of solvent viscosity in the dynamics of protein conformational changes
-
Ansari A, Jones CM, Henry ER, Hofrichter J, Eaton WA (1992) The role of solvent viscosity in the dynamics of protein conformational changes. Science 256(5065):1796-1798.
-
(1992)
Science
, vol.256
, Issue.5065
, pp. 1796-1798
-
-
Ansari, A.1
Jones, C.M.2
Henry, E.R.3
Hofrichter, J.4
Eaton, W.A.5
-
11
-
-
4744357562
-
Internal friction controls the speed of protein folding from a compact configuration
-
Pabit SA, Roder H, Hagen SJ (2004) Internal friction controls the speed of protein folding from a compact configuration. Biochemistry 43(39):12532-12538.
-
(2004)
Biochemistry
, vol.43
, Issue.39
, pp. 12532-12538
-
-
Pabit, S.A.1
Roder, H.2
Hagen, S.J.3
-
13
-
-
0030915264
-
Diffusion control in an elementary protein folding reaction
-
Jacob M, Schindler T, Balbach J, Schmid FX (1997) Diffusion control in an elementary protein folding reaction. Proc Natl Acad Sci USA 94(11):5622-5627.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, Issue.11
, pp. 5622-5627
-
-
Jacob, M.1
Schindler, T.2
Balbach, J.3
Schmid, F.X.4
-
14
-
-
57449090161
-
Measuring internal friction of an ultrafast-folding protein
-
Cellmer T, Henry ER, Hofrichter J, Eaton WA (2008) Measuring internal friction of an ultrafast-folding protein. Proc Natl Acad Sci USA 105(47):18320-18325.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.47
, pp. 18320-18325
-
-
Cellmer, T.1
Henry, E.R.2
Hofrichter, J.3
Eaton, W.A.4
-
15
-
-
0036303731
-
Water contributes actively to the rapid crossing of a protein unfolding barrier
-
Jacob MH, et al. (2002) Water contributes actively to the rapid crossing of a protein unfolding barrier. J Mol Biol 318(3):837-845.
-
(2002)
J Mol Biol
, vol.318
, Issue.3
, pp. 837-845
-
-
Jacob, M.H.1
-
16
-
-
76249117417
-
Experimental evidence for a frustrated energy landscape in a three-helix-bundle protein family
-
Wensley BG, et al. (2010) Experimental evidence for a frustrated energy landscape in a three-helix-bundle protein family. Nature 463(7281):685-688.
-
(2010)
Nature
, vol.463
, Issue.7281
, pp. 685-688
-
-
Wensley, B.G.1
-
17
-
-
33748472551
-
Internal friction in the ultrafast folding of the tryptophan cage
-
Qiu L, Hagen SJ (2005) Internal friction in the ultrafast folding of the tryptophan cage. Chem Phys 312(1-3):327-333.
-
(2005)
Chem Phys
, vol.312
, Issue.1-3
, pp. 327-333
-
-
Qiu, L.1
Hagen, S.J.2
-
18
-
-
0034919305
-
Nuclear magnetic resonance methods for quantifying microsecond-to- millisecond motions in biological macromolecules
-
Palmer AG, 3rd, Kroenke CD, Loria JP (2001) Nuclear magnetic resonance methods for quantifying microsecond-to-millisecond motions in biological macromolecules. Methods Enzymol 339:204-238.
-
(2001)
Methods Enzymol
, vol.339
, pp. 204-238
-
-
Palmer III, A.G.1
Kroenke, C.D.2
Loria, J.P.3
-
19
-
-
33645834303
-
New tools provide new insights in NMR studies of protein dynamics
-
Mittermaier A, Kay LE (2006) New tools provide new insights in NMR studies of protein dynamics. Science 312(5771):224-228.
-
(2006)
Science
, vol.312
, Issue.5771
, pp. 224-228
-
-
Mittermaier, A.1
Kay, L.E.2
-
20
-
-
0001631890
-
High-pressure NMR study of dynamical effects on conformational isomerization of cyclohexane
-
Hasha D, Eguchi T, Jonas J (1982) High-pressure NMR study of dynamical effects on conformational isomerization of cyclohexane. J Am Chem Soc 104(8):2290-2296.
-
(1982)
J Am Chem Soc
, vol.104
, Issue.8
, pp. 2290-2296
-
-
Hasha, D.1
Eguchi, T.2
Jonas, J.3
-
21
-
-
50149085281
-
Structures of invisible, excited protein states by relaxation dispersion NMR spectroscopy
-
Vallurupalli P, Hansen DF, Kay LE (2008) Structures of invisible, excited protein states by relaxation dispersion NMR spectroscopy. Proc Natl Acad Sci USA 105(33):11766-11771.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.33
, pp. 11766-11771
-
-
Vallurupalli, P.1
Hansen, D.F.2
Kay, L.E.3
-
22
-
-
77956501272
-
A transient and low-populated protein-folding intermediate at atomic resolution
-
Korzhnev DM, Religa TL, Banachewicz W, Fersht AR, Kay LE (2010) A transient and low-populated protein-folding intermediate at atomic resolution. Science 329(5997):1312-1316.
-
(2010)
Science
, vol.329
, Issue.5997
, pp. 1312-1316
-
-
Korzhnev, D.M.1
Religa, T.L.2
Banachewicz, W.3
Fersht, A.R.4
Kay, L.E.5
-
23
-
-
84860013075
-
Structure of an intermediate state in protein folding and aggregation
-
Neudecker P, et al. (2012) Structure of an intermediate state in protein folding and aggregation. Science 336(6079):362-366.
-
(2012)
Science
, vol.336
, Issue.6079
, pp. 362-366
-
-
Neudecker, P.1
-
24
-
-
80052401629
-
Solution structure of a minor and transiently formed state of a T4 lysozyme mutant
-
Bouvignies G, et al. (2011) Solution structure of a minor and transiently formed state of a T4 lysozyme mutant. Nature 477(7362):111-114.
-
(2011)
Nature
, vol.477
, Issue.7362
, pp. 111-114
-
-
Bouvignies, G.1
-
25
-
-
42449146665
-
Consistent blind protein structure generation from NMR chemical shift data
-
Shen Y, et al. (2008) Consistent blind protein structure generation from NMR chemical shift data. Proc Natl Acad Sci USA 105(12):4685-4690.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.12
, pp. 4685-4690
-
-
Shen, Y.1
-
26
-
-
34547455182
-
Protein structure determination from NMR chemical shifts
-
Cavalli A, Salvatella X, Dobson CM, Vendruscolo M (2007) Protein structure determination from NMR chemical shifts. Proc Natl Acad Sci USA 104(23):9615-9620.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.23
, pp. 9615-9620
-
-
Cavalli, A.1
Salvatella, X.2
Dobson, C.M.3
Vendruscolo, M.4
-
27
-
-
79960208648
-
Nonnative interactions in the FF domain folding pathway from an atomic resolution structure of a sparsely populated intermediate: An NMR relaxation dispersion study
-
Korzhnev DM, et al. (2011) Nonnative interactions in the FF domain folding pathway from an atomic resolution structure of a sparsely populated intermediate: An NMR relaxation dispersion study. J Am Chem Soc 133(28):10974-10982.
-
(2011)
J Am Chem Soc
, vol.133
, Issue.28
, pp. 10974-10982
-
-
Korzhnev, D.M.1
-
28
-
-
0028857598
-
Association of biomolecular systems via pulsed field gradient NMR self-diffusion measurements
-
Altieri AS, Hinton DP, Byrd RA (1995) Association of biomolecular systems via pulsed field gradient NMR self-diffusion measurements. J Am Chem Soc 117(28):7566-7567.
-
(1995)
J Am Chem Soc
, vol.117
, Issue.28
, pp. 7566-7567
-
-
Altieri, A.S.1
Hinton, D.P.2
Byrd, R.A.3
-
30
-
-
44349108313
-
Formula for the viscosity of a glycerol-water mixture
-
Cheng NS (2008) Formula for the viscosity of a glycerol-water mixture. Ind Eng Chem Res 47(9):3285-3288.
-
(2008)
Ind Eng Chem Res
, vol.47
, Issue.9
, pp. 3285-3288
-
-
Cheng, N.S.1
-
31
-
-
0033577288
-
A relaxation-compensated Carr-Purcell-Meiboom-Gill sequence for characterizing chemical exchange by NMR spectroscopy
-
Loria JP, Rance M, Palmer AG III (1999) A relaxation-compensated Carr-Purcell-Meiboom-Gill sequence for characterizing chemical exchange by NMR spectroscopy. J Am Chem Soc 121(10):2331-2332.
-
(1999)
J Am Chem Soc
, vol.121
, Issue.10
, pp. 2331-2332
-
-
Loria, J.P.1
Rance, M.2
Palmer III, A.G.3
-
32
-
-
36749058463
-
Measurement of bond vector orientations in invisible excited states of proteins
-
Vallurupalli P, Hansen DF, Stollar E, Meirovitch E, Kay LE (2007) Measurement of bond vector orientations in invisible excited states of proteins. Proc Natl Acad Sci USA 104 (47):18473-18477.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.47
, pp. 18473-18477
-
-
Vallurupalli, P.1
Hansen, D.F.2
Stollar, E.3
Meirovitch, E.4
Kay, L.E.5
-
33
-
-
0010957050
-
Reaction rates by nuclear magnetic resonance
-
McConnell HM (1958) Reaction rates by nuclear magnetic resonance. J Chem Phys 28 (3):430-431.
-
(1958)
J Chem Phys
, vol.28
, Issue.3
, pp. 430-431
-
-
McConnell, H.M.1
-
34
-
-
39749156063
-
Probing chemical shifts of invisible states of proteins with relaxation dispersion NMR spectroscopy: How well can we do?
-
Hansen DF, Vallurupalli P, Lundström P, Neudecker P, Kay LE (2008) Probing chemical shifts of invisible states of proteins with relaxation dispersion NMR spectroscopy: How well can we do? J Am Chem Soc 130(8):2667-2675.
-
(2008)
J Am Chem Soc
, vol.130
, Issue.8
, pp. 2667-2675
-
-
Hansen, D.F.1
Vallurupalli, P.2
Lundström, P.3
Neudecker, P.4
Kay, L.E.5
-
36
-
-
84964203940
-
Bootstrap methods for standard errors, confidence intervals, and other measures of statistical accuracy
-
Efron B, Tibshirani R (1986) Bootstrap methods for standard errors, confidence intervals, and other measures of statistical accuracy. Stat Sci 1(1):54-75.
-
(1986)
Stat Sci
, vol.1
, Issue.1
, pp. 54-75
-
-
Efron, B.1
Tibshirani, R.2
-
37
-
-
68349093958
-
TALOS+: A hybrid method for predicting protein backbone torsion angles from NMR chemical shifts
-
Shen Y, Delaglio F, Cornilescu G, Bax A (2009) TALOS+: A hybrid method for predicting protein backbone torsion angles from NMR chemical shifts. J Biomol NMR 44(4):213-223.
-
(2009)
J Biomol NMR
, vol.44
, Issue.4
, pp. 213-223
-
-
Shen, Y.1
Delaglio, F.2
Cornilescu, G.3
Bax, A.4
-
38
-
-
0035215289
-
Amide proton temperature coefficients as hydrogen bond indicators in proteins
-
Cierpicki T, Otlewski J (2001) Amide proton temperature coefficients as hydrogen bond indicators in proteins. J Biomol NMR 21(3):249-261.
-
(2001)
J Biomol NMR
, vol.21
, Issue.3
, pp. 249-261
-
-
Cierpicki, T.1
Otlewski, J.2
-
39
-
-
33750371053
-
Protein folding is slaved to solvent motions
-
Frauenfelder H, Fenimore PW, Chen G, McMahon BH (2006) Protein folding is slaved to solvent motions. Proc Natl Acad Sci USA 103(42):15469-15472.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.42
, pp. 15469-15472
-
-
Frauenfelder, H.1
Fenimore, P.W.2
Chen, G.3
McMahon, B.H.4
-
40
-
-
0002812351
-
Inhomogeneity of viscous aqueous solutions
-
Barshtein G, Almagor A, Yedgar S, Gavish B (1995) Inhomogeneity of viscous aqueous solutions. Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics 52(1):555-557.
-
(1995)
Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics
, vol.52
, Issue.1
, pp. 555-557
-
-
Barshtein, G.1
Almagor, A.2
Yedgar, S.3
Gavish, B.4
-
41
-
-
84859565600
-
Peptide chain dynamics in light and heavy water: Zooming in on internal friction
-
Schulz JCF, Schmidt L, Best RB, Dzubiella J, Netz RR (2012) Peptide chain dynamics in light and heavy water: zooming in on internal friction. J Am Chem Soc 134(14):6273-6279.
-
(2012)
J Am Chem Soc
, vol.134
, Issue.14
, pp. 6273-6279
-
-
Schulz, J.C.F.1
Schmidt, L.2
Best, R.B.3
Dzubiella, J.4
Netz, R.R.5
-
42
-
-
0035128362
-
Effect of viscosity on the kinetics of α-helix and β-hairpin formation
-
Jas GS, Eaton WA, Hofrichter J (2001) Effect of viscosity on the kinetics of α-helix and β-hairpin formation. J Phys Chem B 105(1):261-272.
-
(2001)
J Phys Chem B
, vol.105
, Issue.1
, pp. 261-272
-
-
Jas, G.S.1
Eaton, W.A.2
Hofrichter, J.3
-
43
-
-
49549155483
-
Dynamics of linear polymeric chains
-
Cerf R (1974) Dynamics of linear polymeric chains. Chem Phys Lett 24(3):317-322.
-
(1974)
Chem Phys Lett
, vol.24
, Issue.3
, pp. 317-322
-
-
Cerf, R.1
-
44
-
-
20444409471
-
The structure of the major transition state for folding of an FF domain from experiment and simulation
-
Jemth P, et al. (2005) The structure of the major transition state for folding of an FF domain from experiment and simulation. J Mol Biol 350(2):363-378.
-
(2005)
J Mol Biol
, vol.350
, Issue.2
, pp. 363-378
-
-
Jemth, P.1
-
45
-
-
0037154268
-
Protein folding mediated by solvation: Water expulsion and formation of the hydrophobic core occur after the structural collapse
-
Cheung MS, García AE, Onuchic JN (2002) Protein folding mediated by solvation: Water expulsion and formation of the hydrophobic core occur after the structural collapse. Proc Natl Acad Sci USA 99(2):685-690.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, Issue.2
, pp. 685-690
-
-
Cheung, M.S.1
García, A.E.2
Onuchic, J.N.3
-
47
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio F, et al. (1995) NMRPipe: A multidimensional spectral processing system based on UNIX pipes. J Biomol NMR 6(3):277-293.
-
(1995)
J Biomol NMR
, vol.6
, Issue.3
, pp. 277-293
-
-
Delaglio, F.1
-
48
-
-
4544297801
-
UCSF Sparky: An NMR display, annotation and assignment tool
-
Kneller D, Kuntz I (1993) UCSF Sparky: An NMR display, annotation and assignment tool. J Cell Biochem 53:254.
-
(1993)
J Cell Biochem
, vol.53
, pp. 254
-
-
Kneller, D.1
Kuntz, I.2
-
49
-
-
0036407694
-
The structure of an FF domain from human HYPA/FBP11
-
Allen M, Friedler A, Schon O, Bycroft M (2002) The structure of an FF domain from human HYPA/FBP11. J Mol Biol 323(3):411-416.
-
(2002)
J Mol Biol
, vol.323
, Issue.3
, pp. 411-416
-
-
Allen, M.1
Friedler, A.2
Schon, O.3
Bycroft, M.4
-
50
-
-
0029881007
-
MOLMOL: A program for display and analysis of macromolecular structures
-
Koradi R, Billeter M, Wüthrich K (1996) MOLMOL: A program for display and analysis of macromolecular structures. J Mol Graph 14(1):51-55, 29-32.
-
(1996)
J Mol Graph
, vol.14
, Issue.1
-
-
Koradi, R.1
Billeter, M.2
Wüthrich, K.3
|