-
2
-
-
0041886427
-
New methods for fast multidimensional NMR
-
Freeman R, Kupce E (2003) New methods for fast multidimensional NMR. J Biomol NMR 27:101-113.
-
(2003)
J Biomol NMR
, vol.27
, pp. 101-113
-
-
Freeman, R.1
Kupce, E.2
-
3
-
-
33845552240
-
Hydrogen-bond length and H-1-NMR chemical-shifts in proteins
-
Wagner G, Pardi A, Wüthrich K (1983) Hydrogen-bond length and H-1-NMR chemical-shifts in proteins. J Am Chem Soc 105:5948-5949.
-
(1983)
J Am Chem Soc
, vol.105
, pp. 5948-5949
-
-
Wagner, G.1
Pardi, A.2
Wüthrich, K.3
-
4
-
-
44949269218
-
Empirical comparisons of models for chemical-shift calculation in proteins
-
Williamson MP, Asakura T (1993) Empirical comparisons of models for chemical-shift calculation in proteins. J Magn Reson B 101:63-71.
-
(1993)
J Magn Reson B
, vol.101
, pp. 63-71
-
-
Williamson, M.P.1
Asakura, T.2
-
5
-
-
0029437665
-
Calibration of ring-current effects in proteins and nucleic acids
-
Case DA (1995) Calibration of ring-current effects in proteins and nucleic acids. J Biomol NMR 6:341-346.
-
(1995)
J Biomol NMR
, vol.6
, pp. 341-346
-
-
Case, D.A.1
-
6
-
-
0033003335
-
Protein backbone angle restraints from searching a database for chemical shift and sequence homology
-
Cornilescu G, Delaglio F, Bax A (1999) Protein backbone angle restraints from searching a database for chemical shift and sequence homology. J Biomol NMR 13:289-302.
-
(1999)
J Biomol NMR
, vol.13
, pp. 289-302
-
-
Cornilescu, G.1
Delaglio, F.2
Bax, A.3
-
7
-
-
0035544152
-
Automated prediction of N-15, C-13(alpha), C-13(beta) and C-13′ chemical shifts in proteins using a density functional database
-
Xu XP, Case DA (2001) Automated prediction of N-15, C-13(alpha), C-13(beta) and C-13′ chemical shifts in proteins using a density functional database. J Biomol NMR 21:321-333.
-
(2001)
J Biomol NMR
, vol.21
, pp. 321-333
-
-
Xu, X.P.1
Case, D.A.2
-
8
-
-
34547179849
-
Protein backbone chemical shifts predicted from searching a database for torsion angle and sequence homology
-
Shen Y, Bax A (2007) Protein backbone chemical shifts predicted from searching a database for torsion angle and sequence homology. J Biomol NMR 38:289-302.
-
(2007)
J Biomol NMR
, vol.38
, pp. 289-302
-
-
Shen, Y.1
Bax, A.2
-
9
-
-
0029050883
-
Nuclear magnetic dipole interactions in field-oriented proteins: Information for structure determination in solution
-
Tolman JR, Flanagan JM, Kennedy MA, Prestegard JH (1995) Nuclear magnetic dipole interactions in field-oriented proteins: Information for structure determination in solution. Proc Natl Acad Sci USA 92:9279-9283.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 9279-9283
-
-
Tolman, J.R.1
Flanagan, J.M.2
Kennedy, M.A.3
Prestegard, J.H.4
-
10
-
-
0030722243
-
Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline medium
-
Tjandra N, Bax A (1997) Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline medium. Science 278:1111-1114.
-
(1997)
Science
, vol.278
, pp. 1111-1114
-
-
Tjandra, N.1
Bax, A.2
-
11
-
-
0034620764
-
Protein structure determination using molecular fragment replacement and NMR dipolar couplings
-
Delaglio F, Kontaxis G, Bax A (2000) Protein structure determination using molecular fragment replacement and NMR dipolar couplings. J Am Chem Soc 122:2142-2143.
-
(2000)
J Am Chem Soc
, vol.122
, pp. 2142-2143
-
-
Delaglio, F.1
Kontaxis, G.2
Bax, A.3
-
12
-
-
0034501067
-
De novo protein structure determination using sparse NMR data
-
Bowers PM, Strauss CEM, Baker D (2000) De novo protein structure determination using sparse NMR data. J Biomol NMR 18:311-318.
-
(2000)
J Biomol NMR
, vol.18
, pp. 311-318
-
-
Bowers, P.M.1
Strauss, C.E.M.2
Baker, D.3
-
14
-
-
34547572386
-
Building native protein conformation from NMR backbone chemical shifts using Monte Carlo fragment assembly
-
Gong HP, Shen Y, Rose GD (2007) Building native protein conformation from NMR backbone chemical shifts using Monte Carlo fragment assembly. Protein Sci 16:1515-1521.
-
(2007)
Protein Sci
, vol.16
, pp. 1515-1521
-
-
Gong, H.P.1
Shen, Y.2
Rose, G.D.3
-
15
-
-
67349189383
-
Kinetics of formation of native ribonuclease during oxidation of reduced polypeptide chain
-
Anfinsen CB, Haber E, Sela M, White FH (1961) Kinetics of formation of native ribonuclease during oxidation of reduced polypeptide chain. Proc Natl Acad Sci USA 47:1309-1314.
-
(1961)
Proc Natl Acad Sci USA
, vol.47
, pp. 1309-1314
-
-
Anfinsen, C.B.1
Haber, E.2
Sela, M.3
White, F.H.4
-
16
-
-
24944493938
-
Toward high-resolution de novo structure prediction for small proteins
-
Bradley P, Misura KMS, Baker D (2005) Toward high-resolution de novo structure prediction for small proteins. Science 309:1868-1871.
-
(2005)
Science
, vol.309
, pp. 1868-1871
-
-
Bradley, P.1
Misura, K.M.S.2
Baker, D.3
-
18
-
-
0038407231
-
Rapid and accurate calculation of protein H-1, C-13 and N-15 chemical shifts
-
Neal S, Nip AM, Zhang HY, Wishart DS (2003) Rapid and accurate calculation of protein H-1, C-13 and N-15 chemical shifts. J Biomol NMR 26:215-240.
-
(2003)
J Biomol NMR
, vol.26
, pp. 215-240
-
-
Neal, S.1
Nip, A.M.2
Zhang, H.Y.3
Wishart, D.S.4
-
19
-
-
16244404569
-
Molecular fragment replacement approach to protein structure determination by chemical shift and dipolar homology database mining
-
Kontaxis G, Delaglio F, Bax A (2005) Molecular fragment replacement approach to protein structure determination by chemical shift and dipolar homology database mining. Methods Enzymol 394:42-78.
-
(2005)
Methods Enzymol
, vol.394
, pp. 42-78
-
-
Kontaxis, G.1
Delaglio, F.2
Bax, A.3
-
20
-
-
23044509110
-
NMR data collection and analysis protocol for high-throughput protein structure determination
-
Liu GH, et al. (2005) NMR data collection and analysis protocol for high-throughput protein structure determination. Proc Natl Acad Sci USA 102:10487-10492.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 10487-10492
-
-
Liu, G.H.1
-
21
-
-
24344445864
-
ABACUS, a direct method for protein NMR structure computation via assembly of fragments
-
Grishaev A, et al. (2005) ABACUS, a direct method for protein NMR structure computation via assembly of fragments. Proteins 61:36-43.
-
(2005)
Proteins
, vol.61
, pp. 36-43
-
-
Grishaev, A.1
-
22
-
-
34547679071
-
NMR: Prediction of protein flexibility
-
Berjanskii M, Wishart DS (2006) NMR: Prediction of protein flexibility. Nature Protocols 1:683-688.
-
(2006)
Nature Protocols
, vol.1
, pp. 683-688
-
-
Berjanskii, M.1
Wishart, D.S.2
-
23
-
-
0030339738
-
AQUA and Procheck NMR: Programs for checking the quality of protein structures solved by NMR
-
Laskowski RA, Rullmann JAC, MacArthur MW, Kaptein R, Thornton JM (1996) AQUA and Procheck NMR: Programs for checking the quality of protein structures solved by NMR. J Biomol NMR 8:477-486.
-
(1996)
J Biomol NMR
, vol.8
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmann, J.A.C.2
MacArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
24
-
-
0034487752
-
Exploring steric constraints on protein mutations using MAGE/PROBE
-
Word JM, Bateman RC, Presley BK, Lovell SC, Richardson DC (2000) Exploring steric constraints on protein mutations using MAGE/PROBE. Protein Sci 9:2251-2259.
-
(2000)
Protein Sci
, vol.9
, pp. 2251-2259
-
-
Word, J.M.1
Bateman, R.C.2
Presley, B.K.3
Lovell, S.C.4
Richardson, D.C.5
-
25
-
-
13644252170
-
Protein NMR recall, precision, and F-measure scores (RPF scores): Structure quality assessment measures based on information retrieval statistics
-
Huang YJ, Powers R, Montelione GT (2005) Protein NMR recall, precision, and F-measure scores (RPF scores): Structure quality assessment measures based on information retrieval statistics. J Am Chem Soc 127:1665-1674.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 1665-1674
-
-
Huang, Y.J.1
Powers, R.2
Montelione, G.T.3
-
26
-
-
33947396044
-
Novel beta-barrel fold in the nuclear magnetic resonance structure of the replicase nonstructural protein 1 from the severe acute respiratory syndrome coronavirus
-
Almeida MS, Johnson MA, Herrmann T, Geralt M, Wüthrich K (2007) Novel beta-barrel fold in the nuclear magnetic resonance structure of the replicase nonstructural protein 1 from the severe acute respiratory syndrome coronavirus. J Virol 81:3151-3161.
-
(2007)
J Virol
, vol.81
, pp. 3151-3161
-
-
Almeida, M.S.1
Johnson, M.A.2
Herrmann, T.3
Geralt, M.4
Wüthrich, K.5
-
27
-
-
0038008976
-
An improved protein decoy set for testing energy functions for protein structure prediction
-
Tsai J, et al. (2003) An improved protein decoy set for testing energy functions for protein structure prediction. Proteins 53:76-87.
-
(2003)
Proteins
, vol.53
, pp. 76-87
-
-
Tsai, J.1
-
28
-
-
14644438345
-
Progress and challenges in high-resolution refinement of protein structure models
-
Misura KMS, Baker D (2005) Progress and challenges in high-resolution refinement of protein structure models. Proteins 59:15-29.
-
(2005)
Proteins
, vol.59
, pp. 15-29
-
-
Misura, K.M.S.1
Baker, D.2
-
29
-
-
5744249209
-
Equation of state calculations by fast computing machines
-
Metropolis N, Rosenbluth AW, Rosenbluth MN, Teller AH, Teller E (1953) Equation of state calculations by fast computing machines. J Chem Phys 21:1087-1092.
-
(1953)
J Chem Phys
, vol.21
, pp. 1087-1092
-
-
Metropolis, N.1
Rosenbluth, A.W.2
Rosenbluth, M.N.3
Teller, A.H.4
Teller, E.5
-
30
-
-
0034641749
-
Native protein sequences are close to optimal for their structures
-
Kuhlman B, Baker D (2000) Native protein sequences are close to optimal for their structures. Proc Natl Acad Sci USA 97:10383-10388.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 10383-10388
-
-
Kuhlman, B.1
Baker, D.2
-
31
-
-
1842326139
-
Bayesian statistical analysis of protein side-chain rotamer preferences
-
Dunbrack RL, Cohen FE (1997) Bayesian statistical analysis of protein side-chain rotamer preferences. Protein Sci 6:1661-1681.
-
(1997)
Protein Sci
, vol.6
, pp. 1661-1681
-
-
Dunbrack, R.L.1
Cohen, F.E.2
-
32
-
-
0029881007
-
MOLMOL: A program for display and analysis of macromolecular structures
-
Koradi R, Billeter M, Wüthrich K (1996) MOLMOL: A program for display and analysis of macromolecular structures. J Mol Graphics 14:51-55.
-
(1996)
J Mol Graphics
, vol.14
, pp. 51-55
-
-
Koradi, R.1
Billeter, M.2
Wüthrich, K.3
|