ESTs from the microsporidian Edhazardia aedis

BMC Genomics

Volumn 9, Issue , 2008, Pages

  Gill, Erin E ^a   Becnel, James J ^b   Fast, Naomi M ^a  

^a UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^b CENTER FOR MEDICAL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTONOSPORA LOCUSTAE; ARTICLE; CONTROLLED STUDY; EDHAZARDIA AEDIS; ENCEPHALITOZOON CUNICULI; EXPRESSED SEQUENCE TAG; GENETIC DISTANCE; GENETIC TRANSCRIPTION; GENOME ANALYSIS; GENOME SIZE; LIFE CYCLE; MICROSPORIDA; NONHUMAN; NUCLEOTIDE SEQUENCE; ORTHOLOGY; PARASITE; PROTOZOAL GENETICS; PROTOZOAN SPORE; SPECIES COMPARISON; TRANSCRIPTOMICS; TRANSPOSON; UNINDEXED SEQUENCE; 3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; ANIMAL; BASE PAIRING; CYTOLOGY; FUNGUS SPORE; GENETICS; GENOME; GROWTH, DEVELOPMENT AND AGING; HOST PARASITE INTERACTION; INTRON; LARVA; MOSQUITO; PARASITOLOGY; PHYLOGENY; PHYSIOLOGY; SPECIES DIFFERENCE; SYNTENY;

ANIMALIA; ANTONOSPORA LOCUSTAE; EDHAZARDIA AEDIS; ENCEPHALITOZOON CUNICULI; FUNGI; MICROSPORIDIA;

FUNGAL PROTEIN;

3' UNTRANSLATED REGIONS; 5' UNTRANSLATED REGIONS; ANIMALS; BASE PAIRING; CULICIDAE; DNA TRANSPOSABLE ELEMENTS; EXPRESSED SEQUENCE TAGS; FUNGAL PROTEINS; GENOME, FUNGAL; HOST-PARASITE INTERACTIONS; INTRONS; LARVA; LIFE CYCLE STAGES; MICROSPORIDIA; PHYLOGENY; SPECIES SPECIFICITY; SPORES, FUNGAL; SYNTENY; TRANSCRIPTION, GENETIC;

EID: 47749122176     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-9-296     Document Type: Article

References (28)

1. Wittner M Weiss LM The Microsporidia and Microsporidosis Washington, D. C.: ASM Press 1999
2. Katinka MD Duprat S Cornillot E Metenier G Thomarat F Prensier G Barbe V Peyretaillade E Brottier P Wincker P Delbac F El Alaoui H Peyret P Saurin W Gouy M Weissenbach J Vivares C Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi Nature 2001, 414:450-453 10.1038/35106579 11719806
3. Slamovits CH Fast NM Law JS Keeling PJ Genome compaction and stability in microsporidian intracellular parasites Curr Biol 2004, 14:891-896 10.1016/j.cub.2004.04.041 15186746
4. Streett DA Analysis of Nosema locustae (microsporidia:NOsematidae) chromosomal DNA with pulsed-field gel electrophoresis J Invertebr Pathol 1994, 63:301-303 10.1006/jipa.1994.1055
5. Becnel JJ Edhazardia aedis (microsporidia: Amblyosporidae) as a biological control agent of Aedes aegypti (diptera: Culicidae) Proc Vth Int Colloq Invertebr Pathol Microb Control: Adelaide, Australia 1990:56-60
6. Becnel JJ Sprague V Fukuda T Hazard EI Development of Edhazardia aedis (kudo, 1930 N. G., N. comb. (microsporidia: Amblyosporidae) in the mosquito Aedes aegypti (L.) (DIptera: Culicidae) J Protozool 1989, 36:119-130 2724178
7. Johnson MA Becnel JJ Undeen AH A new sporulation sequence in Edhazardia aedis (microsporidia: Culicosporidae), a parasite of the mosquito Aedes aegypti (diptera: Culicidae) J Invertebr Pathol 1997, 70:69-75 10.1006/ jipa.1997.4678
8. Williams BAP Lee RCH Becnel JJ Weiss LM Fast NM Keeling PJ Genome sequence surveys of Brachiola algerae and Edhazardia aedis reveal microsporidia with low gene densities BMC Genomics
9. Williams BA Slamovits CH Patron NJ Fast NM Keeling PJ A high frequency of overlapping gene expression in compacted eukaryotic genomes Proc Natl Acad Sci USA 2005, 102:10936-10941 1182411 16037215 10.1073/ pnas.0501321102
10. Corradi N Gangaeva A Keeling PJ Comparative profiling of overlapping transcription in the compacted genomes of microsporidia Antonospora locustae and Encephalitozoon cuniculi Genomics
11. Limpright VO Fast NM personal communication
12. Brosson D Kuhn L Delbac F Garin J Vivares CP Texier C Proteomic analysis of the eukaryotic parasite Encephalitozoon cuniculi (microsporidia): A reference map for proteins expressed in late sporogonial stages Proteomics 2006, 6:3625-3635 10.1002/pmic.200500796 16691553
13. Xu J Pan G Fang L Li J Tian X Li T Zhou Z Xiang Z The varying microsporidian genome: Existence of long-terminal repeat retrotransposon in domesticated silkworm parasite Nosema bombycis Int J Parasitol 2006,36 16797019
14. Hinkle G Morrison HG Sogin ML Genes coding for reverse transcriptase, DNA-directed RNA polymerase, and chitin synthetase from the microsporidian Spraguea lophii Biol Bull 1997, 193:250-251 9390396
15. Pandrea I Mittleider D Brindley PJ Didier ES Robertson DL Phylogenetic relationships of methionine aminopeptidase 2 among Encephalitozoon species and genotypes of microsporidia Mol Biochem Parasit 2005, 140:141-152 10.1016/j.molbiopara.2004.12.006
16. Mayer MP Bukau B Hsp70 chaperones: Cellular functions and molecular mechanism Cell Mol Life Sci 2005, 62:670-684 10.1007/s00018-004-4464-6 15770419
17. O'Brien E Koski L Zhang Y Yang L Wang E Gray MW Burger G Lang BF TBestDB: A taxinomically broad database of expressed sequence tags (ESTs) Nucleic Acids Res 2007, 35:D445-451 1899108 17202165 10.1093/nar/ gkl770
18. Wilcox J Dunbar HE Wolfinger RD Moran NA Consequences of reductive evolution for gene expression in an obligate endosymbiont Mol Microbiol 2003, 48:1491-1500 10.1046/j.1365-2958.2003.03522.x 12791133
19. Thomarat F Vivares CP Gouy M Phylogenetic analysis of the complete genome sequence of Encephalitozoon cuniculi supports the fungal origin of microsporidia and reveals a high frequency of fast-evolving genes J Mol Evol 2004, 59:780-791 10.1007/s00239-004-2673-0 15599510
20. Peer Van de Y Ben Ali A Meyer A Microsporidia: Accumulating molecular evidence that a group of amitochondriate and suspectedly primitive eukaryotes are just curious fungi Gene 2000, 246:1-8 10.1016/ S0378-1119(00)00063-9 10767522
21. Kinsey PT Sandmeyer SB Ty3 transposes in mating populations of yeast: A novel transposition assay for Ty3 Genetics 1995, 139:81-94 1206350 7705653
22. Mittleider D Green LC Mann VH Michael SF Didier ES Brindley PJ Sequence survey of the genome of the opportunistic microsporidian pathogen, Vittaforma corneae J Eukaryot Microbiol 2002, 49:393-401 10.1111/ j.1550-7408.2002.tb00218.x 12425527
23. Peaston AE Evsikov AV Graber JH de Vries WN Holbrook AE Solter D Knowles BB Retrotransposons regulate host genes in mouse oocytes and preimplantation embryos Dev Cell 2004, 7:597-606 10.1016/ j.devcel.2004.09.004 15469847
24. Zhang Z Dietrich FS Mapping of transcription start sites in Saccharomyces cerevisiae using 5′ SAGE Nucleic Acids Res 2005, 33:2838-2851 1131933 15905473 10.1093/nar/gki583
25. Graber JH Cantor CR Mohr SC Smith TF Genomic detection of new yeast pre-mRNA 3′-end-processing signals Nucleic Acids Res 1999, 3:888-894 10.1093/nar/27.3.888
26. Mazumder B Seshadri V Fox PL Translational control by the 3′-UTR: The ends specify the means Trends Biochem Sci 2003, 2:91-98 10.1016/ S0968-0004(03)00002-1
27. Becnel JJ Garcia JJ Johnson MA Edhazardia aedis (microspora: Culicosporidae) effects on the reproductive capacity of Aedes aegypti (diptera: Culicidae) J Med Entomol 1995, 32:549-553 7650718
28. Altschul SF Madden TL Schaffer AA Zhang J Zhang Z Miller W Lipman DJ Gapped BLAST and PSI-BLAST: A new generation of protein database search programs Nucleic Acids Res 1997, 25:3389-3402 146917 9254694 10.1093/nar/ 25.17.3389