메뉴 건너뛰기




Volumn 160, Issue 4, 2013, Pages 334-345

Strategies to query and display allergy-derived epitope data from the immune epitope database

Author keywords

Allergen; Allergy; Database; Epitope

Indexed keywords

ALLERGEN; EPITOPE; IMMUNOGLOBULIN E; BETA LACTOGLOBULIN; CASEIN;

EID: 84869216707     PISSN: 10182438     EISSN: 14230097     Source Type: Journal    
DOI: 10.1159/000343880     Document Type: Article
Times cited : (13)

References (63)
  • 1
    • 33750350343 scopus 로고    scopus 로고
    • Allergy and hypersensitivity: Mechanisms of allergic disease
    • Akdis CA: Allergy and hypersensitivity: mechanisms of allergic disease. Curr Opin Immunol 2006; 18: 718-726.
    • (2006) Curr Opin Immunol , vol.18 , pp. 718-726
    • Akdis, C.A.1
  • 2
    • 0033591638 scopus 로고    scopus 로고
    • Immunoglobulin E-independent major histocompatibility complex-restricted T cell peptide epitope- induced late asthmatic reactions
    • Haselden BM, Kay AB, Larche M: Immunoglobulin E-independent major histocompatibility complex-restricted T cell peptide epitope- induced late asthmatic reactions. J Exp Med 1999; 189: 1885-1894.
    • (1999) J Exp Med , vol.189 , pp. 1885-1894
    • Haselden, B.M.1    Kay, A.B.2    Larche, M.3
  • 4
    • 78650902704 scopus 로고    scopus 로고
    • Mechanisms of allergen- specific immunotherapy
    • Akdis CA, Akdis M: Mechanisms of allergen- specific immunotherapy. J Allergy Clin Immunol 2011; 127: 18-27.
    • (2011) J Allergy Clin Immunol , vol.127 , pp. 18-27
    • Akdis, C.A.1    Akdis, M.2
  • 5
    • 34548237449 scopus 로고    scopus 로고
    • Sublingual immunotherapy induces IL-10-producing T regulatory cells, allergen-specific Tcell tolerance, and immune deviation
    • Bohle B, Kinaciyan T, Gerstmayr M, Radakovics A, Jahn-Schmid B, Ebner C: Sublingual immunotherapy induces IL-10-producing T regulatory cells, allergen-specific Tcell tolerance, and immune deviation. J Allergy Clin Immunol 2007; 120: 707-713.
    • (2007) J Allergy Clin Immunol , vol.120 , pp. 707-713
    • Bohle, B.1    Kinaciyan, T.2    Gerstmayr, M.3    Radakovics, A.4    Jahn-Schmid, B.5    Ebner, C.6
  • 6
    • 18244391173 scopus 로고    scopus 로고
    • T cell epitope immunotherapy induces a CD4(+) T cell population with regulatory Activity
    • Verhoef A, Alexander C, Kay AB, Larche M: T cell epitope immunotherapy induces a CD4(+) T cell population with regulatory Activity. PLoS Med 2005; 2:e78.
    • (2005) PLoS Med , vol.2
    • Verhoef, A.1    Alexander, C.2    Kay, A.B.3    Larche, M.4
  • 7
    • 0037504093 scopus 로고    scopus 로고
    • Induction of IL-10+CD4+CD25+ T cells by grass pollen immunotherapy
    • Francis JN, Till SJ, Durham SR: Induction of IL-10+CD4+CD25+ T cells by grass pollen immunotherapy. J Allergy Clin Immunol 2003; 111: 1255-1261.
    • (2003) J Allergy Clin Immunol , vol.111 , pp. 1255-1261
    • Francis, J.N.1    Till, S.J.2    Durham, S.R.3
  • 9
    • 0030956363 scopus 로고    scopus 로고
    • Insect venom immunotherapy induces interleukin-10 production and a Th2-to-Th1 shift, and changes surface marker expression in venom-allergic subjects
    • Bellinghausen I, Metz G, Enk AH, Christmann S, Knop J, Saloga J: Insect venom immunotherapy induces interleukin-10 production and a Th2-to-Th1 shift, and changes surface marker expression in venom-allergic subjects. Eur J Immunol 1997; 27: 1131-1139.
    • (1997) Eur J Immunol , vol.27 , pp. 1131-1139
    • Bellinghausen, I.1    Metz, G.2    Enk, A.H.3    Christmann, S.4    Knop, J.5    Saloga, J.6
  • 10
    • 9844266243 scopus 로고    scopus 로고
    • Immunological changes during specific immunotherapy of grass pollen allergy: Reduced lymphoproliferative responses to allergen and shift from TH2 to TH1 in T-cell clones specific for Phl p 1, a major grass pollen allergen
    • Ebner C, Siemann U, Bohle B, Willheim M, Wiedermann U, Schenk S et al: Immunological changes during specific immunotherapy of grass pollen allergy: reduced lymphoproliferative responses to allergen and shift from TH2 to TH1 in T-cell clones specific for Phl p 1, a major grass pollen allergen. Clin Exp Allergy 1997; 27: 1007-1015.
    • (1997) Clin Exp Allergy , vol.27 , pp. 1007-1015
    • Ebner, C.1    Siemann, U.2    Bohle, B.3    Willheim, M.4    Wiedermann, U.5    Schenk, S.6
  • 11
    • 0027222095 scopus 로고
    • Influence of grass pollen immunotherapy on cellular infiltration and cytokine mRNA expression during allergen-induced late-phase cutaneous responses
    • Varney VA, Hamid QA, Gaga M, Ying S, Jacobson M, Frew AJ, et al: Influence of grass pollen immunotherapy on cellular infiltration and cytokine mRNA expression during allergen-induced late-phase cutaneous responses. J Clin Invest 1993; 92: 644-651.
    • (1993) J Clin Invest , vol.92 , pp. 644-651
    • Varney, V.A.1    Hamid, Q.A.2    Gaga, M.3    Ying, S.4    Jacobson, M.5    Frew, A.J.6
  • 12
    • 79551504195 scopus 로고    scopus 로고
    • Longterm tolerance after allergen immunotherapy is accompanied by selective persistence of blocking antibodies
    • James LK, Shamji MH, Walker SM, Wilson DR, Wachholz PA, Francis JN et al: Longterm tolerance after allergen immunotherapy is accompanied by selective persistence of blocking antibodies. J Allergy Clin Immunol 2011; 127: 509-516.
    • (2011) J Allergy Clin Immunol , vol.127 , pp. 509-516
    • James, L.K.1    Shamji, M.H.2    Walker, S.M.3    Wilson, D.R.4    Wachholz, P.A.5    Francis, J.N.6
  • 13
    • 0043258973 scopus 로고    scopus 로고
    • Inhibition of allergen-IgE binding to B cells by IgG antibodies after grass pollen immunotherapy
    • Wachholz PA, Soni NK, Till SJ, Durham SR: Inhibition of allergen-IgE binding to B cells by IgG antibodies after grass pollen immunotherapy. J Allergy Clin Immunol 2003; 112: 915-922.
    • (2003) J Allergy Clin Immunol , vol.112 , pp. 915-922
    • Wachholz, P.A.1    Soni, N.K.2    Till, S.J.3    Durham, S.R.4
  • 14
    • 0015009175 scopus 로고
    • Immunologic and cellular changes accompanying the therapy of pollen allergy
    • Levy DA, Lichtenstein LM, Goldstein EO, Ishizaka K: Immunologic and cellular changes accompanying the therapy of pollen allergy. J Clin Invest 1971; 50: 360-369.
    • (1971) J Clin Invest , vol.50 , pp. 360-369
    • Levy, D.A.1    Lichtenstein, L.M.2    Goldstein, E.O.3    Ishizaka, K.4
  • 15
    • 84856396743 scopus 로고    scopus 로고
    • Allergen immunotherapy: 100 years on
    • Durham SR: Allergen immunotherapy: 100 years on. Clin Exp Allergy 2011; 41: 1171.
    • (2011) Clin Exp Allergy , vol.41 , pp. 1171
    • Durham, S.R.1
  • 16
    • 79955473722 scopus 로고    scopus 로고
    • 100 years of hyposensitization: History of allergen-specific immunotherapy (ASIT)
    • Ring J, Gutermuth J: 100 years of hyposensitization: history of allergen-specific immunotherapy (ASIT). Allergy 2011; 66: 713-724.
    • (2011) Allergy , vol.66 , pp. 713-724
    • Ring, J.1    Gutermuth, J.2
  • 17
    • 80053546277 scopus 로고    scopus 로고
    • Tcell epitope-based allergy vaccines
    • Larche M: T cell epitope-based allergy vaccines. Curr Top Microbiol Immunol 2011; 352: 107-119.
    • (2011) Curr Top Microbiol Immunol , vol.352 , pp. 107-119
    • Larche, M.1
  • 18
    • 33847300425 scopus 로고    scopus 로고
    • Epitope peptides and immunotherapy
    • Tanabe S: Epitope peptides and immunotherapy. Curr Protein Peptide Sci 2007; 8: 109-118.
    • (2007) Curr Protein Peptide Sci , vol.8 , pp. 109-118
    • Tanabe, S.1
  • 19
    • 17644401678 scopus 로고    scopus 로고
    • Peptide-based therapeutic vaccines for allergic and autoimmune diseases
    • Larche M, Wraith DC: Peptide-based therapeutic vaccines for allergic and autoimmune diseases. Nat Med 2005; 11:S69-S76.
    • (2005) Nat Med , vol.11
    • Larche, M.1    Wraith, D.C.2
  • 20
    • 79960301160 scopus 로고    scopus 로고
    • Mechanisms of allergen-antibody interaction of cockroach allergen Bla g 2 with monoclonal antibodies that inhibit IgE antibody binding
    • Glesner J, Wünschmann S, Li M, Gustchina A, Wlodawer A, Himly M, Chapman MD, Pomés A: Mechanisms of allergen-antibody interaction of cockroach allergen Bla g 2 with monoclonal antibodies that inhibit IgE antibody binding. PLoS One 2011; 6:e22223.
    • (2011) PLoS One , vol.6
    • Glesner, J.1    Wünschmann, S.2    Li, M.3    Gustchina, A.4    Wlodawer, A.5    Himly, M.6    Chapman, M.D.7    Pomés, A.8
  • 21
    • 0344393658 scopus 로고    scopus 로고
    • Mutational epitope analysis of Pru av 1 and Api g 1, the major allergens of cherry (Prunus avium) and celery (Apium graveolens): Correlating IgE reactivity with three-dimensional structure
    • Neudecker P, Lehmann K, Nerkamp J, Haase T, Wangorsch A, Fotisch K et al: Mutational epitope analysis of Pru av 1 and Api g 1, the major allergens of cherry (Prunus avium) and celery (Apium graveolens): correlating IgE reactivity with three-dimensional structure. Biochem J 2003; 376: 97-107.
    • (2003) Biochem J , vol.376 , pp. 97-107
    • Neudecker, P.1    Lehmann, K.2    Nerkamp, J.3    Haase, T.4    Wangorsch, A.5    Fotisch, K.6
  • 22
    • 33947509901 scopus 로고    scopus 로고
    • Hypoallergens for allergen-specific immunotherapy by directed molecular evolution of mite group 2 allergens
    • Gafvelin G, Parmley S, Neimert-Andersson T, Blank U, Eriksson TL, van HM et al: Hypoallergens for allergen-specific immunotherapy by directed molecular evolution of mite group 2 allergens. J Biol Chem 2007; 282: 3778-3787.
    • (2007) J Biol Chem , vol.282 , pp. 3778-3787
    • Gafvelin, G.1    Parmley, S.2    Neimert-Andersson, T.3    Blank, U.4    Eriksson, T.L.5    Van, H.M.6
  • 23
    • 0036687715 scopus 로고    scopus 로고
    • Conversion of grass pollen allergen-specific human IgE into a protective IgG(1) antibody
    • Flicker S, Steinberger P, Norderhaug L, Sperr WR, Majlesi Y, Valent P, et al: Conversion of grass pollen allergen-specific human IgE into a protective IgG(1) antibody. Eur J Immunol 2002; 32: 2156-2162.
    • (2002) Eur J Immunol , vol.32 , pp. 2156-2162
    • Flicker, S.1    Steinberger, P.2    Norderhaug, L.3    Sperr, W.R.4    Majlesi, Y.5    Valent, P.6
  • 24
    • 76349083910 scopus 로고    scopus 로고
    • A combination vaccine for allergy and rhinovirus infections based on rhinovirus- derived surface protein VP1 and a nonallergenic peptide of the major timothy grass pollen allergen Phl p 1
    • Edlmayr J, Niespodziana K, Linhart B, Focke- Tejkl M, Westritschnig K, Scheiblhofer S, et al: A combination vaccine for allergy and rhinovirus infections based on rhinovirus- derived surface protein VP1 and a nonallergenic peptide of the major timothy grass pollen allergen Phl p 1. J Immunol 2009; 182: 6298-6306.
    • (2009) J Immunol , vol.182 , pp. 6298-6306
    • Edlmayr, J.1    Niespodziana, K.2    Linhart, B.3    Focke-Tejkl, M.4    Westritschnig, K.5    Scheiblhofer, S.6
  • 26
    • 0028120683 scopus 로고
    • IgE epitopes on the cat (Felis domesticus) major allergen Fel d I: A study with overlapping synthetic peptides
    • van Milligen FJ, van 't HW, van den BM, Aalberse RC: IgE epitopes on the cat (Felis domesticus) major allergen Fel d I: a study with overlapping synthetic peptides. J Allergy Clin Immunol 1994; 93: 34-43.
    • (1994) J Allergy Clin Immunol , vol.93 , pp. 34-43
    • Van Milligen, F.J.1    Van 'T, H.W.2    Van Den, B.M.3    Aalberse, R.C.4
  • 27
    • 59649088270 scopus 로고    scopus 로고
    • A mimotope gene encoding the major IgE epitope of allergen Phl p 5 for epitope-specific immunization
    • Wallmann J, Proell M, Stepanoska T, Hantusch B, Pali-Scholl I, Thalhamer T et al: A mimotope gene encoding the major IgE epitope of allergen Phl p 5 for epitope-specific immunization. Immunol Lett 2009; 122: 68-75.
    • (2009) Immunol Lett , vol.122 , pp. 68-75
    • Wallmann, J.1    Proell, M.2    Stepanoska, T.3    Hantusch, B.4    Pali-Scholl, I.5    Thalhamer, T.6
  • 28
    • 17644371966 scopus 로고    scopus 로고
    • Mucosal immunity and vaccines
    • Holmgren J, Czerkinsky C: Mucosal immunity and vaccines. Nat Med 2005; 11:S45- S53.
    • (2005) Nat Med , vol.11
    • Holmgren, J.1    Czerkinsky, C.2
  • 29
    • 11344255717 scopus 로고    scopus 로고
    • Structural relatedness of plant food allergens with specific reference to cross-reactive allergens: An in silico analysis
    • Jenkins JA, Griffiths-Jones S, Shewry PR, Breiteneder H, Mills EN: Structural relatedness of plant food allergens with specific reference to cross-reactive allergens: an in silico analysis. J Allergy Clin Immunol 2005; 115: 163-170.
    • (2005) J Allergy Clin Immunol , vol.115 , pp. 163-170
    • Jenkins, J.A.1    Griffiths-Jones, S.2    Shewry, P.R.3    Breiteneder, H.4    Mills, E.N.5
  • 31
    • 0036419887 scopus 로고    scopus 로고
    • Molecular basis of arthropod cross-reactivity: IgE-binding cross-reactive epitopes of shrimp, house dust mite and cockroach tropomyosins
    • Ayuso R, Reese G, Leong-Kee S, Plante M, Lehrer SB: Molecular basis of arthropod cross-reactivity: IgE-binding cross-reactive epitopes of shrimp, house dust mite and cockroach tropomyosins. Int Arch Allergy Immunol 2002; 129: 38-48.
    • (2002) Int Arch Allergy Immunol , vol.129 , pp. 38-48
    • Ayuso, R.1    Reese, G.2    Leong-Kee, S.3    Plante, M.4    Lehrer, S.B.5
  • 33
    • 70450204938 scopus 로고    scopus 로고
    • Relevant B cell epitopes in allergic disease
    • Pomés A: Relevant B cell epitopes in allergic disease. Int Arch Allergy Immunol 2010; 152: 1-11.
    • (2010) Int Arch Allergy Immunol , vol.152 , pp. 1-11
    • Pomés, A.1
  • 35
    • 33847199653 scopus 로고    scopus 로고
    • Assessment of allergen crossreactivity
    • Aalberse RC: Assessment of allergen crossreactivity, Clin Mol Allergy 2007; 5: 2.
    • (2007) Clin Mol Allergy , vol.5 , pp. 2
    • Aalberse, R.C.1
  • 36
    • 80052659566 scopus 로고    scopus 로고
    • IgE-binding epitopes: A reappraisal
    • Aalberse RC, Crameri R: IgE-binding epitopes: a reappraisal. Allergy 2011; 66: 1261-1274.
    • (2011) Allergy , vol.66 , pp. 1261-1274
    • Aalberse, R.C.1    Crameri, R.2
  • 37
    • 44449145067 scopus 로고    scopus 로고
    • Assessment of Bet v 1-specific CD4+ T cell responses in allergic and nonallergic individuals using MHC class II peptide tetramers
    • Van OL, Wambre E, Maillere B, Von HE, Louise A, Balazuc AM, et al: Assessment of Bet v 1-specific CD4+ T cell responses in allergic and nonallergic individuals using MHC class II peptide tetramers. J Immunol 2008; 180: 4514-4522.
    • (2008) J Immunol , vol.180 , pp. 4514-4522
    • Van, O.L.1    Wambre, E.2    Maillere, B.3    Von, H.E.4    Louise, A.5    Balazuc, A.M.6
  • 38
    • 84856416212 scopus 로고    scopus 로고
    • Differentiation stage determines pathologic and protective allergen specific CD4+ T-cell outcomes during specific immunotherapy
    • Wambre E, DeLong JH, James EA, LaFond RE, Robinson D, Kwok WW: Differentiation stage determines pathologic and protective allergen specific CD4+ T-cell outcomes during specific immunotherapy. J Allergy Clin Immunol 2012; 129: 544-551.
    • (2012) J Allergy Clin Immunol , vol.129 , pp. 544-551
    • Wambre, E.1    Delong, J.H.2    James, E.A.3    Lafond, R.E.4    Robinson, D.5    Kwok, W.W.6
  • 39
    • 79959857888 scopus 로고    scopus 로고
    • Autoreactive CD4(+) T cells in patients with atopic dermatitis
    • James EA, Kwok WW: Autoreactive CD4(+) T cells in patients with atopic dermatitis. J Allergy Clin Immunol 2011; 128: 100-101.
    • (2011) J Allergy Clin Immunol , vol.128 , pp. 100-101
    • James, E.A.1    Kwok, W.W.2
  • 41
    • 79955774320 scopus 로고    scopus 로고
    • Comparison between major histocompatibility complex class II tetramer staining and surface expression of activation markers for the detection of allergen-specific CD4+ T cells
    • Bonvalet M, Wambre E, Moussu H, Horiot S, Kwok WW, Louise A, Ebo D, Hoarau C, Van Overtvelt L, Baron-Bodo V, Moingeon P: Comparison between major histocompatibility complex class II tetramer staining and surface expression of activation markers for the detection of allergen-specific CD4+ T cells. Clin Exp Allergy 2011; 41: 821-829.
    • (2011) Clin Exp Allergy , vol.41 , pp. 821-829
    • Bonvalet, M.1    Wambre, E.2    Moussu, H.3    Horiot, S.4    Kwok, W.W.5    Louise, A.6    Ebo, D.7    Hoarau, C.8    Van Overtvelt, L.9    Baron-Bodo, V.10    Moingeon, P.11
  • 48
    • 67650492400 scopus 로고    scopus 로고
    • Peptide immunotherapy in allergic asthma generates IL-10-dependent immunological tolerance associated with linked epitope suppression
    • Campbell JD, Buckland KF, McMillan SJ, Kearley J, Oldfield WL, Stern LJ et al: Peptide immunotherapy in allergic asthma generates IL-10-dependent immunological tolerance associated with linked epitope suppression. J Exp Med 2009; 206: 1535-1547.
    • (2009) J Exp Med , vol.206 , pp. 1535-1547
    • Campbell, J.D.1    Buckland, K.F.2    McMillan, S.J.3    Kearley, J.4    Oldfield, W.L.5    Stern, L.J.6
  • 49
    • 70449698030 scopus 로고    scopus 로고
    • Anaphylaxis syndromes related to a new mammalian cross-reactive carbohydrate determinant
    • Commins SP, Platts-Mills TA: Anaphylaxis syndromes related to a new mammalian cross-reactive carbohydrate determinant. J Allergy Clin Immunol 2009; 124: 652-657.
    • (2009) J Allergy Clin Immunol , vol.124 , pp. 652-657
    • Commins, S.P.1    Platts-Mills, T.A.2
  • 52
    • 34249707334 scopus 로고    scopus 로고
    • EpitopeViewer: A java application for the visualization and analysis of immune epitopes in the immune epitope database and analysis resource (IEDB)
    • Beaver JE, Bourne PE, Ponomarenko JV: EpitopeViewer: a Java application for the visualization and analysis of immune epitopes in the Immune Epitope Database and Analysis Resource (IEDB). Immunome Res 2007; 3: 3.
    • (2007) Immunome Res , vol.3 , pp. 3
    • Beaver, J.E.1    Bourne, P.E.2    Ponomarenko, J.V.3
  • 54
    • 84861695188 scopus 로고    scopus 로고
    • A meta-analysis of the existing knowledge of immunoreactivity against hepatitis C virus (HCV)
    • Kim Y, Vaughan K, Greenbaum J, Peters B, Law M, Sette A: A meta-analysis of the existing knowledge of immunoreactivity against hepatitis C virus (HCV). PLoS One 2012; 7:e38028.
    • (2012) PLoS One , vol.7
    • Kim, Y.1    Vaughan, K.2    Greenbaum, J.3    Peters, B.4    Law, M.5    Sette, A.6
  • 56
    • 0034235234 scopus 로고    scopus 로고
    • Dominant epitopes and allergic cross-reactivity: Complex formation between a Fab fragment of a monoclonal murine IgG antibody and the major allergen from birch pollen Bet v 1
    • Mirza O, Henriksen A, Ipsen H, Larsen JN, Wissenbach M, Spangfort MD, Gajhede M: Dominant epitopes and allergic cross-reactivity: complex formation between a Fab fragment of a monoclonal murine IgG antibody and the major allergen from birch pollen Bet v 1. J Immunol 2000; 165: 331-338.
    • (2000) J Immunol , vol.165 , pp. 331-338
    • Mirza, O.1    Henriksen, A.2    Ipsen, H.3    Larsen, J.N.4    Wissenbach, M.5    Spangfort, M.D.6    Gajhede, M.7
  • 60
    • 59349114360 scopus 로고    scopus 로고
    • Crystal structures of mite allergens der f 1 and der p 1 reveal differences in surface-exposed residues that may influence antibody binding
    • Chruszcz M, Chapman MD, Vailes LD, Stura EA, Saint-Remy JM, Minor W, Pomés A: Crystal structures of mite allergens Der f 1 and Der p 1 reveal differences in surface-exposed residues that may influence antibody binding. J Mol Biol 2009; 386: 520-530.
    • (2009) J Mol Biol , vol.386 , pp. 520-530
    • Chruszcz, M.1    Chapman, M.D.2    Vailes, L.D.3    Stura, E.A.4    Saint-Remy, J.M.5    Minor, W.6    Pomés, A.7
  • 61
    • 78650901420 scopus 로고    scopus 로고
    • Development and preliminary clinical evaluation of a peptide immunotherapy vaccine for cat allergy
    • Worm M, Lee HH, Kleine-Tebbe J, Hafner RP, Laidler P, Healey D, et al: Development and preliminary clinical evaluation of a peptide immunotherapy vaccine for cat allergy. J Allergy Clin Immunol 2011; 127: 89-97.
    • (2011) J Allergy Clin Immunol , vol.127 , pp. 89-97
    • Worm, M.1    Lee, H.H.2    Kleine-Tebbe, J.3    Hafner, R.P.4    Laidler, P.5    Healey, D.6
  • 62
    • 84857802193 scopus 로고    scopus 로고
    • Remembrance of things past: HLA genes come back on the allergy stage
    • Vercelli D: Remembrance of things past: HLA genes come back on the allergy stage. Allergy Clin Immunol 2012; 129: 846-847.
    • (2012) Allergy Clin Immunol , vol.129 , pp. 846-847
    • Vercelli, D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.