-
2
-
-
33947197663
-
The epidemiology, pathogenesis and treatment of Pseudomonas aeruginosa infections
-
Driscoll JA, Brody S, Kollef MH, (2007) The epidemiology, pathogenesis and treatment of Pseudomonas aeruginosa infections. Drugs 67: 351-368.
-
(2007)
Drugs
, vol.67
, pp. 351-368
-
-
Driscoll, J.A.1
Brody, S.2
Kollef, M.H.3
-
3
-
-
69249157248
-
The type III secretion system of Pseudomonas aeruginosa: infection by injection
-
Hauser AR, (2009) The type III secretion system of Pseudomonas aeruginosa: infection by injection. Nat Rev Microbiol 7: 654-665.
-
(2009)
Nat Rev Microbiol
, vol.7
, pp. 654-665
-
-
Hauser, A.R.1
-
4
-
-
0038376087
-
The mechanism of action of the Pseudomonas aeruginosa-encoded type III cytotoxin, ExoU
-
Sato H, Frank DW, Hillard CJ, Feix JB, Pankhaniya RR, et al. (2003) The mechanism of action of the Pseudomonas aeruginosa-encoded type III cytotoxin, ExoU. EMBO J 22: 2959-2969.
-
(2003)
EMBO J
, vol.22
, pp. 2959-2969
-
-
Sato, H.1
Frank, D.W.2
Hillard, C.J.3
Feix, J.B.4
Pankhaniya, R.R.5
-
5
-
-
0142135037
-
In vivo phospholipase activity of the Pseudomonas aeruginosa cytotoxin ExoU and protection of mammalian cells with phospholipase A2 inhibitors
-
Phillips RM, Six DA, Dennis EA, Ghosh P, (2003) In vivo phospholipase activity of the Pseudomonas aeruginosa cytotoxin ExoU and protection of mammalian cells with phospholipase A2 inhibitors. J Biol Chem 278: 41326-41332.
-
(2003)
J Biol Chem
, vol.278
, pp. 41326-41332
-
-
Phillips, R.M.1
Six, D.A.2
Dennis, E.A.3
Ghosh, P.4
-
6
-
-
1542616971
-
Lysophospholipase A activity of Pseudomonas aeruginosa type III secretory toxin ExoU
-
Tamura M, Ajayi T, Allmond LR, Moriyama K, Wiener-Kronish JP, et al. (2004) Lysophospholipase A activity of Pseudomonas aeruginosa type III secretory toxin ExoU. Biochem Biophys Res Commun 316: 323-331.
-
(2004)
Biochem Biophys Res Commun
, vol.316
, pp. 323-331
-
-
Tamura, M.1
Ajayi, T.2
Allmond, L.R.3
Moriyama, K.4
Wiener-Kronish, J.P.5
-
7
-
-
9244236027
-
Relative contributions of Pseudomonas aeruginosa ExoU, ExoS, and ExoT to virulence in the lung
-
Shaver CM, Hauser AR, (2004) Relative contributions of Pseudomonas aeruginosa ExoU, ExoS, and ExoT to virulence in the lung. Infect Immun 72: 6969-6977.
-
(2004)
Infect Immun
, vol.72
, pp. 6969-6977
-
-
Shaver, C.M.1
Hauser, A.R.2
-
8
-
-
0031785949
-
Identification and characterization of SpcU, a chaperone required for efficient secretion of the ExoU cytotoxin
-
Finck-Barbançon V, Yahr T, Frank DW, (1998) Identification and characterization of SpcU, a chaperone required for efficient secretion of the ExoU cytotoxin. J Bacteriol 180: 6224-6231.
-
(1998)
J Bacteriol
, vol.180
, pp. 6224-6231
-
-
Finck-Barbançon, V.1
Yahr, T.2
Frank, D.W.3
-
9
-
-
77955302592
-
Role of the membrane localization domain of the Pseudomonas aeruginosa effector protein ExoU in cytotoxicity
-
Veesenmeyer JL, Howell H, Halavaty AS, Ahrens S, Anderson WF, et al. (2010) Role of the membrane localization domain of the Pseudomonas aeruginosa effector protein ExoU in cytotoxicity. Infect Immun 78: 3346-3357.
-
(2010)
Infect Immun
, vol.78
, pp. 3346-3357
-
-
Veesenmeyer, J.L.1
Howell, H.2
Halavaty, A.S.3
Ahrens, S.4
Anderson, W.F.5
-
10
-
-
11144265658
-
Functional regions of the Pseudomonas aeruginosa cytotoxin ExoU
-
Rabin SD, Hauser AR, (2005) Functional regions of the Pseudomonas aeruginosa cytotoxin ExoU. Infect Immun 73: 573-582.
-
(2005)
Infect Immun
, vol.73
, pp. 573-582
-
-
Rabin, S.D.1
Hauser, A.R.2
-
11
-
-
79953903080
-
Induced conformational changes in the activation of the Pseudomonas aeruginosa type III toxin, ExoU
-
Benson MA, Komas SM, Schmalzer KM, Casey MS, Frank DW, et al. (2011) Induced conformational changes in the activation of the Pseudomonas aeruginosa type III toxin, ExoU. Biophys J 100: 1335-1343.
-
(2011)
Biophys J
, vol.100
, pp. 1335-1343
-
-
Benson, M.A.1
Komas, S.M.2
Schmalzer, K.M.3
Casey, M.S.4
Frank, D.W.5
-
12
-
-
33748672064
-
Identification of superoxide dismutase as a cofactor for the Pseudomonas aeruginosa type III toxin, ExoU
-
Sato H, Feix JB, Frank DW, (2006) Identification of superoxide dismutase as a cofactor for the Pseudomonas aeruginosa type III toxin, ExoU. Biochemistry 45: 10368-10375.
-
(2006)
Biochemistry
, vol.45
, pp. 10368-10375
-
-
Sato, H.1
Feix, J.B.2
Frank, D.W.3
-
13
-
-
83355166268
-
Ubiquitin and ubiquitin-modified proteins activate the Pseudomonas aeruginosa T3SS cytotoxin, ExoU
-
Anderson DM, Schmalzer KM, Sato H, Casey M, Terhune SS, et al. (2011) Ubiquitin and ubiquitin-modified proteins activate the Pseudomonas aeruginosa T3SS cytotoxin, ExoU. Mol Microbiol 82: 1454-1467.
-
(2011)
Mol Microbiol
, vol.82
, pp. 1454-1467
-
-
Anderson, D.M.1
Schmalzer, K.M.2
Sato, H.3
Casey, M.4
Terhune, S.S.5
-
14
-
-
33344459126
-
A common structural motif in the binding of virulence factors to bacterial secretion chaperones
-
Lilic M, Vujanac M, Stebbins CE, (2006) A common structural motif in the binding of virulence factors to bacterial secretion chaperones. Mol Cell 21: 653-664.
-
(2006)
Mol Cell
, vol.21
, pp. 653-664
-
-
Lilic, M.1
Vujanac, M.2
Stebbins, C.E.3
-
15
-
-
0036283512
-
Three-dimensional secretion signals in chaperone-effector complexes of bacterial pathogens
-
Birtalan SC, Phillips RM, Ghosh P, (2002) Three-dimensional secretion signals in chaperone-effector complexes of bacterial pathogens. Mol Cell 9: 971-980.
-
(2002)
Mol Cell
, vol.9
, pp. 971-980
-
-
Birtalan, S.C.1
Phillips, R.M.2
Ghosh, P.3
-
16
-
-
0035499438
-
Maintenance of an unfolded polypeptide by a cognate chaperone in bacterial type III secretion
-
Stebbins CE, Galan JE, (2001) Maintenance of an unfolded polypeptide by a cognate chaperone in bacterial type III secretion. Nature 414: 77-81.
-
(2001)
Nature
, vol.414
, pp. 77-81
-
-
Stebbins, C.E.1
Galan, J.E.2
-
17
-
-
13444303937
-
Three-dimensional structure of a macromolecular assembly that regulates type III secretion in Yersinia pestis
-
Schubot FD, Jackson MW, Penrose KJ, Cherry S, Tropea JE, et al. (2005) Three-dimensional structure of a macromolecular assembly that regulates type III secretion in Yersinia pestis. J Mol Biol 346: 1147-1161.
-
(2005)
J Mol Biol
, vol.346
, pp. 1147-1161
-
-
Schubot, F.D.1
Jackson, M.W.2
Penrose, K.J.3
Cherry, S.4
Tropea, J.E.5
-
18
-
-
1542358787
-
Prediction and functional analysis of native disorder in proteins from the three kingdoms of life
-
Ward JJ, Sodhi JS, McGuffin LJ, Buxton BF, Jones DT, (2004) Prediction and functional analysis of native disorder in proteins from the three kingdoms of life. J Mol Biol 337: 635-645.
-
(2004)
J Mol Biol
, vol.337
, pp. 635-645
-
-
Ward, J.J.1
Sodhi, J.S.2
McGuffin, L.J.3
Buxton, B.F.4
Jones, D.T.5
-
19
-
-
0345633461
-
The various and varying roles of specific chaperons in type III secretion systems
-
Parsot C, Hamiaus C, Page A-L, (2003) The various and varying roles of specific chaperons in type III secretion systems. Curr Opin Microbiol 6: 7-14.
-
(2003)
Curr Opin Microbiol
, vol.6
, pp. 7-14
-
-
Parsot, C.1
Hamiaus, C.2
Page, A.-L.3
-
20
-
-
0034977803
-
Multiple domains are required for the toxin activity of Pseudomonas aeruginosa ExoU
-
Finck-Barbançon V, Frank DW, (2001) Multiple domains are required for the toxin activity of Pseudomonas aeruginosa ExoU. J Bacteriol 183: 4330-4344.
-
(2001)
J Bacteriol
, vol.183
, pp. 4330-4344
-
-
Finck-Barbançon, V.1
Frank, D.W.2
-
21
-
-
33646374906
-
A C-terminal domain targets the Pseudomonas aeruginosa cytotoxin ExoU to the plasma membrane of host cells
-
Rabin SD, Veesenmeyer JL, Bieging KT, Hauser AR, (2006) A C-terminal domain targets the Pseudomonas aeruginosa cytotoxin ExoU to the plasma membrane of host cells. Infect Immun 74: 2552-2561.
-
(2006)
Infect Immun
, vol.74
, pp. 2552-2561
-
-
Rabin, S.D.1
Veesenmeyer, J.L.2
Bieging, K.T.3
Hauser, A.R.4
-
22
-
-
0033617291
-
Crystal structure of human cytosolic phospholipase A2 reveals a novel topology and catalytic mechanism
-
Dessen A, Tang J, Schmidt H, Stahl M, Clark JD, et al. (1999) Crystal structure of human cytosolic phospholipase A2 reveals a novel topology and catalytic mechanism. Cell 97: 349-360.
-
(1999)
Cell
, vol.97
, pp. 349-360
-
-
Dessen, A.1
Tang, J.2
Schmidt, H.3
Stahl, M.4
Clark, J.D.5
-
23
-
-
0037984885
-
The crystal structure, mutagenesis, and activity studies reveal that patatin is a lipid acyl hydrolase with a Ser-Asp catalytic dyad
-
Rydel TJ, Williams JM, Krieger E, Moshiri F, Stallings WC, et al. (2003) The crystal structure, mutagenesis, and activity studies reveal that patatin is a lipid acyl hydrolase with a Ser-Asp catalytic dyad. Biochemistry 42: 6696-6708.
-
(2003)
Biochemistry
, vol.42
, pp. 6696-6708
-
-
Rydel, T.J.1
Williams, J.M.2
Krieger, E.3
Moshiri, F.4
Stallings, W.C.5
-
24
-
-
33745621121
-
Eukaryotic localization, activation and ubiquitinylation of a bacterial type III secreted toxin
-
Stirling FR, Cuzick A, Kelly SM, Oxley D, Evans TJ, (2006) Eukaryotic localization, activation and ubiquitinylation of a bacterial type III secreted toxin. Cell Microbiol 8: 1294-1309.
-
(2006)
Cell Microbiol
, vol.8
, pp. 1294-1309
-
-
Stirling, F.R.1
Cuzick, A.2
Kelly, S.M.3
Oxley, D.4
Evans, T.J.5
-
25
-
-
77949694407
-
Activation of ExoU phospholipase activity requires specific C-terminal regions
-
Schmalzer KM, Benson MA, Frank DW, (2010) Activation of ExoU phospholipase activity requires specific C-terminal regions. J Bacteriol 192: 1801-1812.
-
(2010)
J Bacteriol
, vol.192
, pp. 1801-1812
-
-
Schmalzer, K.M.1
Benson, M.A.2
Frank, D.W.3
-
26
-
-
0037469577
-
The multitalented type III chaperones: all you can do with 15 kDa
-
Feldman MF, Cornelis GR, (2003) The multitalented type III chaperones: all you can do with 15 kDa. FEMS Microbiol Lett 219: 151-158.
-
(2003)
FEMS Microbiol Lett
, vol.219
, pp. 151-158
-
-
Feldman, M.F.1
Cornelis, G.R.2
-
27
-
-
34247567041
-
Crsytal structure reveal a thiol protease-like catalytic trid in the C-temrinla region of Pasteurella multocida toxin
-
Kitadokoro K, Kamitani S, Miyazawa M, Hanajima-Ozawa M, Fukui A, et al. (2007) Crsytal structure reveal a thiol protease-like catalytic trid in the C-temrinla region of Pasteurella multocida toxin. Proc Natl Acad Sci USA 104: 5139-5144.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 5139-5144
-
-
Kitadokoro, K.1
Kamitani, S.2
Miyazawa, M.3
Hanajima-Ozawa, M.4
Fukui, A.5
-
28
-
-
23644460027
-
Structural basis for the function of Clostridium difficile toxin B
-
Reinert DJ, Jank T, Aktories K, Schulz GE, (2005) Structural basis for the function of Clostridium difficile toxin B. J Mol Biol 351: 973-981.
-
(2005)
J Mol Biol
, vol.351
, pp. 973-981
-
-
Reinert, D.J.1
Jank, T.2
Aktories, K.3
Schulz, G.E.4
-
29
-
-
84856065042
-
Plasma membrane asociation of three classes of bacterial toxins is mediated by a basic-hydrophobic motif
-
Geissler B, Ahrens S, Satchell KJF, (2012) Plasma membrane asociation of three classes of bacterial toxins is mediated by a basic-hydrophobic motif. Cell Microbiol 14: 286-298.
-
(2012)
Cell Microbiol
, vol.14
, pp. 286-298
-
-
Geissler, B.1
Ahrens, S.2
Satchell, K.J.F.3
-
30
-
-
77950449027
-
Identification of a conserved membrane localization domain within numerous large bacterial protein toxins
-
Geissler B, Tungekar R, Satchell KJF, (2010) Identification of a conserved membrane localization domain within numerous large bacterial protein toxins. Proc Natl Acad Sci USA 107: 5581-5586.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 5581-5586
-
-
Geissler, B.1
Tungekar, R.2
Satchell, K.J.F.3
-
31
-
-
70349445327
-
The Rho GTPase inactivation domain in Vibrio cholerae MARTX toxin has a circularly permuted papain-like thiol protease fol
-
Pei J, Grishin NV, (2009) The Rho GTPase inactivation domain in Vibrio cholerae MARTX toxin has a circularly permuted papain-like thiol protease fol. Protiens 77: 413-419.
-
(2009)
Protiens
, vol.77
, pp. 413-419
-
-
Pei, J.1
Grishin, N.V.2
-
32
-
-
70350351548
-
Structural and molecular mechanism for autoprocessing of MARTX toxin of Vibrio cholerae at multiple sites
-
Prochazkova K, Shuvalova L, Minasov G, Voburka Z, Anderson WF, et al. (2009) Structural and molecular mechanism for autoprocessing of MARTX toxin of Vibrio cholerae at multiple sites. J Biol Chem 284: 26557-26568.
-
(2009)
J Biol Chem
, vol.284
, pp. 26557-26568
-
-
Prochazkova, K.1
Shuvalova, L.2
Minasov, G.3
Voburka, Z.4
Anderson, W.F.5
-
33
-
-
0037592266
-
Essential Ca(2+)-independent role of the group IVA cytosolic phospholipase A(2) C2 domain for interfacial activity
-
Six DA, Dennis EA, (2003) Essential Ca(2+)-independent role of the group IVA cytosolic phospholipase A(2) C2 domain for interfacial activity. J Biol Chem 278: 23842-23850.
-
(2003)
J Biol Chem
, vol.278
, pp. 23842-23850
-
-
Six, D.A.1
Dennis, E.A.2
-
34
-
-
84870639202
-
1.55 Angstrom crystal structure of the four helical bundle membrane localization domain (4HBM) of the Vibrio vulnificus MARTX effector domain DUF5
-
Minasov G, Wawrzak Z, Geissler B, Shuvalova L, Dubrovska I, et al. (2012) 1.55 Angstrom crystal structure of the four helical bundle membrane localization domain (4HBM) of the Vibrio vulnificus MARTX effector domain DUF5. Protein Data Bank (PDB) DOI: 10.2210/pdb4err/pdb.
-
(2012)
Protein Data Bank (PDB)
-
-
Minasov, G.1
Wawrzak, Z.2
Geissler, B.3
Shuvalova, L.4
Dubrovska, I.5
-
35
-
-
84861206143
-
Structural basis of cytotoxicity mediated by the type III secretion toxin ExoU from Pseudomonas aeruginosa
-
Gendrin C, Contreras-Martel C, Bouillot S, Elsen S, Lemaire D, et al. (2012) Structural basis of cytotoxicity mediated by the type III secretion toxin ExoU from Pseudomonas aeruginosa. PLoS Pathog 8: e1002637.
-
(2012)
PLoS Pathog
, vol.8
-
-
Gendrin, C.1
Contreras-Martel, C.2
Bouillot, S.3
Elsen, S.4
Lemaire, D.5
-
36
-
-
33749362995
-
Characterization of ExsC and ExsD self-association and heterocomplex formation
-
Lykken GL, Chen G, Brutinel ED, Chen L, Yahr TL, (2010) Characterization of ExsC and ExsD self-association and heterocomplex formation. J Bacteriol 188: 6832-6840.
-
(2010)
J Bacteriol
, vol.188
, pp. 6832-6840
-
-
Lykken, G.L.1
Chen, G.2
Brutinel, E.D.3
Chen, L.4
Yahr, T.L.5
-
37
-
-
13444295356
-
Structure of the Yersinia pestis type III secretion chaperone SycH in complex with a stable fragment of YscM2
-
Phan J, Tropea JE, Waugh DS, (2004) Structure of the Yersinia pestis type III secretion chaperone SycH in complex with a stable fragment of YscM2. Acta Crystallogr D60: 1591-1599.
-
(2004)
Acta Crystallogr
, vol.D60
, pp. 1591-1599
-
-
Phan, J.1
Tropea, J.E.2
Waugh, D.S.3
-
38
-
-
0032514874
-
A structural explanation for the recognition of tyrosine-based endocytotic signals
-
Owen DJ, Evans P, (1998) A structural explanation for the recognition of tyrosine-based endocytotic signals. Science 282: 1327-1332.
-
(1998)
Science
, vol.282
, pp. 1327-1332
-
-
Owen, D.J.1
Evans, P.2
-
40
-
-
0029070171
-
Omega loops: Nonregular secondary structures significant in protein function and stability
-
Fetrow JS, (1995) Omega loops: Nonregular secondary structures significant in protein function and stability. FASEB J 9: 708-717.
-
(1995)
FASEB J
, vol.9
, pp. 708-717
-
-
Fetrow, J.S.1
-
41
-
-
38749142906
-
Protein production and purification
-
Structural Genomics Consortium
-
Structural Genomics Consortium Architecture et Fonction des Macromolécules Biologiques Berkeley Structural Genomics Center China Structural Genomics Consortium Integrated Center for Structure and Function Innovation, (2008) et al. Protein production and purification. Nature Methods 5: 135-146.
-
(2008)
Nature Methods
, vol.5
, pp. 135-146
-
-
-
42
-
-
0031958764
-
CLAMP: a biosensor kinetic data analysis program
-
Myszka DG, Morton TA, (1998) CLAMP: a biosensor kinetic data analysis program. Trends Biochem Sci 23: 149-150.
-
(1998)
Trends Biochem Sci
, vol.23
, pp. 149-150
-
-
Myszka, D.G.1
Morton, T.A.2
-
43
-
-
0031552507
-
Ta6Br(2+)12, a tool for phase determination of large biological assemblies by X-ray crystallography
-
Knäblein J, Neufeind T, Schneider F, Bergner A, Messerschmidt A, et al. (1997) Ta6Br(2+)12, a tool for phase determination of large biological assemblies by X-ray crystallography. J Mol Biol 270: 1-7.
-
(1997)
J Mol Biol
, vol.270
, pp. 1-7
-
-
Knäblein, J.1
Neufeind, T.2
Schneider, F.3
Bergner, A.4
Messerschmidt, A.5
-
44
-
-
37549039510
-
A short history of SHELX
-
Sheldrick GM, (2008) A short history of SHELX. Acta Crystallogr A64: 112-122.
-
(2008)
Acta Crystallogr
, vol.A64
, pp. 112-122
-
-
Sheldrick, G.M.1
-
45
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z, Minor W, (1997) Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol 276: 307-326.
-
(1997)
Methods Enzymol
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
46
-
-
33745933955
-
HKL-3000: the integration of data reduction and structure solution-from diffraction images to an initial model in minutes
-
Minor W, Cymborowski M, Otwinowski Z, Chruszcz M, (2006) HKL-3000: the integration of data reduction and structure solution-from diffraction images to an initial model in minutes. Acta Crystallogr D62: 859-866.
-
(2006)
Acta Crystallogr
, vol.D62
, pp. 859-866
-
-
Minor, W.1
Cymborowski, M.2
Otwinowski, Z.3
Chruszcz, M.4
-
48
-
-
33846046558
-
The many faces of radiation-induced changes
-
Borek D, Ginell S, Cymborowski M, Minor W, Otwinowski Z, (2007) The many faces of radiation-induced changes. J Synchrotron Radiat 14: 24-33.
-
(2007)
J Synchrotron Radiat
, vol.14
, pp. 24-33
-
-
Borek, D.1
Ginell, S.2
Cymborowski, M.3
Minor, W.4
Otwinowski, Z.5
-
49
-
-
77950801803
-
Diffraction data analysis in the presence of radiation damage
-
Borek D, Cynborowski M, Machius M, Minor W, Otwinowski Z, (2010) Diffraction data analysis in the presence of radiation damage. Acta Crystallogr D66: 426-436.
-
(2010)
Acta Crystallogr
, vol.D66
, pp. 426-436
-
-
Borek, D.1
Cynborowski, M.2
Machius, M.3
Minor, W.4
Otwinowski, Z.5
-
50
-
-
0032128419
-
Miscellaneous algorithms for density modification
-
Cowtan K, Main P, (1998) Miscellaneous algorithms for density modification. Acta Crystallogr D54: 487-493.
-
(1998)
Acta Crystallogr
, vol.D54
, pp. 487-493
-
-
Cowtan, K.1
Main, P.2
-
51
-
-
0028103275
-
The CCP4 suite: programs for protein crystallography
-
CCP4
-
CCP4 (1994) The CCP4 suite: programs for protein crystallography. Acta Crystallogr D50: 760-763.
-
(1994)
Acta Crystallogr
, vol.D50
, pp. 760-763
-
-
-
52
-
-
33748337934
-
The Buccaneer software for automated model building. 1. Tracing protein chains
-
Cowtan K, (2006) The Buccaneer software for automated model building. 1. Tracing protein chains. Acta Crystallogr D62: 1002-1011.
-
(2006)
Acta Crystallogr
, vol.D62
, pp. 1002-1011
-
-
Cowtan, K.1
-
53
-
-
13244281317
-
Coot: model-building tools for molecular graphics
-
Emsley P, Cowtan K, (2004) Coot: model-building tools for molecular graphics. Acta Crystallogr D60: 2126-2132.
-
(2004)
Acta Crystallogr
, vol.D60
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
54
-
-
79953763877
-
REFMAC5 for the refinement of macromolecular crystal structures
-
Murshudov GN, Skubák P, Lebedev AA, Pannu NS, Steiner RA, et al. (2011) REFMAC5 for the refinement of macromolecular crystal structures. Acta Crystallogr D67: 355-367.
-
(2011)
Acta Crystallogr
, vol.D67
, pp. 355-367
-
-
Murshudov, G.N.1
Skubák, P.2
Lebedev, A.A.3
Pannu, N.S.4
Steiner, R.A.5
-
55
-
-
0032897075
-
Efficient anisotropic refinement of macromolecular structures using FFT
-
Murshudov GN, Vagin AA, Lebedev AA, Wilson KS, Dodson EJ, (1999) Efficient anisotropic refinement of macromolecular structures using FFT. Acta Crystallogr D55: 247-255.
-
(1999)
Acta Crystallogr
, vol.D55
, pp. 247-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Lebedev, A.A.3
Wilson, K.S.4
Dodson, E.J.5
-
56
-
-
0003845223
-
-
DeLano Scientific, Palo Alto, CA, U.S.A. Available
-
DeLano W (2002) The PyMOL Molecular Graphics System, DeLano Scientific, Palo Alto, CA, U.S.A. Available: http://www.pymol.org.
-
(2002)
The PyMOL Molecular Graphics System
-
-
DeLano, W.1
-
57
-
-
84861060898
-
OPM database and PPM server: resources for positioning of proteins in membranes
-
Lomize MA, Pogozheva ID, Joo H, Mosberg HI, Lomize AL, (2012) OPM database and PPM server: resources for positioning of proteins in membranes. Available: http://opm.phar.umich.edu/server.php. Nucleic Acids Res 40: D370-D376.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Lomize, M.A.1
Pogozheva, I.D.2
Joo, H.3
Mosberg, H.I.4
Lomize, A.L.5
-
58
-
-
13444307044
-
Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions
-
Krissinel E, Henrick K, (2004) Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. Acta Crystallogr D60: 2256-2268.
-
(2004)
Acta Crystallogr
, vol.D60
, pp. 2256-2268
-
-
Krissinel, E.1
Henrick, K.2
-
59
-
-
0033824470
-
DaliLite workbench for protein structure comparison
-
Holm L, Park J, (2000) DaliLite workbench for protein structure comparison. Bioinformatics 16: 566-567.
-
(2000)
Bioinformatics
, vol.16
, pp. 566-567
-
-
Holm, L.1
Park, J.2
-
60
-
-
0032961270
-
ESPript: multiple sequence alignments in PostScript
-
Gouet P, Courcelle E, Stuart DI, Metoz F, (1999) ESPript: multiple sequence alignments in PostScript. Bioinformatics 15: 305-308.
-
(1999)
Bioinformatics
, vol.15
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
Metoz, F.4
-
61
-
-
0024267619
-
Amino acid substitutions in structurally related proteins. A pattern recognition approach. Determination of a new and efficient scoring matrix
-
Risler JL, Delorme MO, Delacroix H, Henaut A, (1988) Amino acid substitutions in structurally related proteins. A pattern recognition approach. Determination of a new and efficient scoring matrix. J Mol Biol 204: 1019-1029.
-
(1988)
J Mol Biol
, vol.204
, pp. 1019-1029
-
-
Risler, J.L.1
Delorme, M.O.2
Delacroix, H.3
Henaut, A.4
-
63
-
-
0028838717
-
Threading a database of protein cores
-
Madej T, Gibrat JF, Bryant SH, (1995) Threading a database of protein cores. Proteins 23: 356-369.
-
(1995)
Proteins
, vol.23
, pp. 356-369
-
-
Madej, T.1
Gibrat, J.F.2
Bryant, S.H.3
|