A comprehensive comparison of RNA-Seq-based transcriptome analysis from reads to differential gene expression and cross-comparison with microarrays: A case study in Saccharomyces cerevisiae

Nucleic Acids Research

Volumn 40, Issue 20, 2012, Pages 10084-10097

  Nookaew, Intawat ^a   Papini, Marta ^a   Pornputtapong, Natapol ^a   Scalcinati, Gionata ^a   Fagerberg, Linn ^b   Uhlén, Matthias ^b,c   Nielsen, Jens ^a,c  

^a CHALMERS UNIVERSITY OF TECHNOLOGY   (Sweden)

^b ROYAL INSTITUTE OF TECHNOLOGY   (Sweden)

^c Chalmers University of Technology   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTOME;

ARTICLE; CONTROLLED STUDY; FUNGAL GENOME; FUNGAL STRAIN; GENE EXPRESSION; GENE IDENTIFICATION; GENE MAPPING; GENETIC VARIABILITY; INTERMETHOD COMPARISON; MICROARRAY ANALYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; REPRODUCIBILITY; RNA ANALYSIS; RNA SEQUENCE; SACCHAROMYCES CEREVISIAE; STATISTICAL ANALYSIS;

BASE SEQUENCE; CHROMOSOME MAPPING; DATA INTERPRETATION, STATISTICAL; GENE EXPRESSION PROFILING; GENOME, FUNGAL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; INDEL MUTATION; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; POLYMORPHISM, SINGLE NUCLEOTIDE; REPRODUCIBILITY OF RESULTS; SACCHAROMYCES CEREVISIAE; SEQUENCE ANALYSIS, RNA; SOFTWARE;

EQUUS ASINUS; SACCHAROMYCES CEREVISIAE;

EID: 84869014474     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gks804     Document Type: Article

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