-
1
-
-
0029842459
-
Oxygen sensing and molecular adaptation to hypoxia
-
Bunn HF, Poyton RO. Oxygen sensing and molecular adaptation to hypoxia. Physiol Rev 1996, 76:839-885.
-
(1996)
Physiol Rev
, vol.76
, pp. 839-885
-
-
Bunn, H.F.1
Poyton, R.O.2
-
2
-
-
46149124043
-
The expanding universe of hypoxia
-
10.1007/s00109-008-0364-9, 2720566, 18551266
-
Zhang H, Semenza GL. The expanding universe of hypoxia. J Mol Med 2008, 86:739-746. 10.1007/s00109-008-0364-9, 2720566, 18551266.
-
(2008)
J Mol Med
, vol.86
, pp. 739-746
-
-
Zhang, H.1
Semenza, G.L.2
-
3
-
-
85047682984
-
Regulation of oxygen homeostasis by hypoxia-inducible factor 1
-
Semenza GL. Regulation of oxygen homeostasis by hypoxia-inducible factor 1. Physiology (Bethesda) 2009, 24:97-106.
-
(2009)
Physiology (Bethesda)
, vol.24
, pp. 97-106
-
-
Semenza, G.L.1
-
4
-
-
43049104517
-
Acute hypoxia, diabetes, and neuroimmune dysregulation: converging mechanisms in the brain
-
Johnson DR, Sherry CL, York JM, Freund GG. Acute hypoxia, diabetes, and neuroimmune dysregulation: converging mechanisms in the brain. Neuroscientist 2008, 14:235-239.
-
(2008)
Neuroscientist
, vol.14
, pp. 235-239
-
-
Johnson, D.R.1
Sherry, C.L.2
York, J.M.3
Freund, G.G.4
-
5
-
-
43549094707
-
Hypoxia-induced signaling in the cardiovascular system
-
10.1146/annurev.physiol.70.113006.100526, 2871679, 17850210
-
Simon MC, Liu L, Barnhart BC, Young RM. Hypoxia-induced signaling in the cardiovascular system. Annu Rev Physiol 2008, 70:51-71. 10.1146/annurev.physiol.70.113006.100526, 2871679, 17850210.
-
(2008)
Annu Rev Physiol
, vol.70
, pp. 51-71
-
-
Simon, M.C.1
Liu, L.2
Barnhart, B.C.3
Young, R.M.4
-
6
-
-
57149100949
-
A predictive model of the oxygen and heme regulatory network in yeast
-
10.1371/journal.pcbi.1000224, 2573020, 19008939
-
Kundaje A, Xin X, Lan C, Lianoglou S, Zhou M, Zhang L, Leslie C. A predictive model of the oxygen and heme regulatory network in yeast. PLoS Comput Biol 2008, 4:e1000224. 10.1371/journal.pcbi.1000224, 2573020, 19008939.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
Kundaje, A.1
Xin, X.2
Lan, C.3
Lianoglou, S.4
Zhou, M.5
Zhang, L.6
Leslie, C.7
-
7
-
-
11244315697
-
Transcriptional regulation of vascular endothelial cell responses to hypoxia by HIF-1
-
10.1182/blood-2004-07-2958, 15374877
-
Manalo DJ, Rowan A, Lavoie T, Natarajan L, Kelly BD, Ye SQ, Garcia JG, Semenza GL. Transcriptional regulation of vascular endothelial cell responses to hypoxia by HIF-1. Blood 2005, 105:659-669. 10.1182/blood-2004-07-2958, 15374877.
-
(2005)
Blood
, vol.105
, pp. 659-669
-
-
Manalo, D.J.1
Rowan, A.2
Lavoie, T.3
Natarajan, L.4
Kelly, B.D.5
Ye, S.Q.6
Garcia, J.G.7
Semenza, G.L.8
-
8
-
-
33646765735
-
Gene expression profiling reveals the profound upregulation of hypoxia-responsive genes in primary human astrocytes
-
10.1152/physiolgenomics.00315.2005, 16507782
-
Mense SM, Sengupta A, Zhou M, Lan C, Bentsman G, Volsky DJ, Zhang L. Gene expression profiling reveals the profound upregulation of hypoxia-responsive genes in primary human astrocytes. Physiol Genomics 2006, 25:435-449. 10.1152/physiolgenomics.00315.2005, 16507782.
-
(2006)
Physiol Genomics
, vol.25
, pp. 435-449
-
-
Mense, S.M.1
Sengupta, A.2
Zhou, M.3
Lan, C.4
Bentsman, G.5
Volsky, D.J.6
Zhang, L.7
-
9
-
-
0036616961
-
Mga2p processing by hypoxia and unsaturated fatty acids in Saccharomyces cerevisiae: impact on LORE-dependent gene expression
-
10.1128/EC.1.3.481-490.2002, 118009, 12455996
-
Jiang Y, Vasconcelles MJ, Wretzel S, Light A, Gilooly L, McDaid K, Oh CS, Martin CE, Goldberg MA. Mga2p processing by hypoxia and unsaturated fatty acids in Saccharomyces cerevisiae: impact on LORE-dependent gene expression. Eukaryot Cell 2002, 1:481-490. 10.1128/EC.1.3.481-490.2002, 118009, 12455996.
-
(2002)
Eukaryot Cell
, vol.1
, pp. 481-490
-
-
Jiang, Y.1
Vasconcelles, M.J.2
Wretzel, S.3
Light, A.4
Gilooly, L.5
McDaid, K.6
Oh, C.S.7
Martin, C.E.8
Goldberg, M.A.9
-
10
-
-
0023768278
-
ROX1 encodes a heme-induced repression factor regulating ANB1 and CYC7 of Saccharomyces cerevisiae
-
365554, 3062365
-
Lowry CV, Zitomer RS. ROX1 encodes a heme-induced repression factor regulating ANB1 and CYC7 of Saccharomyces cerevisiae. Mol Cell Biol 1988, 8:4651-4658. 365554, 3062365.
-
(1988)
Mol Cell Biol
, vol.8
, pp. 4651-4658
-
-
Lowry, C.V.1
Zitomer, R.S.2
-
11
-
-
80053185137
-
Hypoxia elicits broad and systematic changes in protein subcellular localization
-
10.1152/ajpcell.00481.2010, 3191569, 21753182
-
Henke RM, Dastidar RG, Shah AN, Cadinu D, Yao X, Hooda J, Zhang L. Hypoxia elicits broad and systematic changes in protein subcellular localization. Am J Physiol Cell Physiol 2011, 301:C913-C928. 10.1152/ajpcell.00481.2010, 3191569, 21753182.
-
(2011)
Am J Physiol Cell Physiol
, vol.301
-
-
Henke, R.M.1
Dastidar, R.G.2
Shah, A.N.3
Cadinu, D.4
Yao, X.5
Hooda, J.6
Zhang, L.7
-
12
-
-
0037315185
-
Structural analysis of the yeast SWI/SNF chromatin remodeling complex
-
10.1038/nsb888, 12524530
-
Smith CL, Horowitz-Scherer R, Flanagan JF, Woodcock CL, Peterson CL. Structural analysis of the yeast SWI/SNF chromatin remodeling complex. Nat Struct Biol 2003, 10:141-145. 10.1038/nsb888, 12524530.
-
(2003)
Nat Struct Biol
, vol.10
, pp. 141-145
-
-
Smith, C.L.1
Horowitz-Scherer, R.2
Flanagan, J.F.3
Woodcock, C.L.4
Peterson, C.L.5
-
13
-
-
14544308853
-
Composition and functional specificity of SWI2/SNF2 class chromatin remodeling complexes
-
10.1016/j.bbaexp.2004.10.005, 15627498
-
Mohrmann L, Verrijzer CP. Composition and functional specificity of SWI2/SNF2 class chromatin remodeling complexes. Biochim Biophys Acta 2005, 1681:59-73. 10.1016/j.bbaexp.2004.10.005, 15627498.
-
(2005)
Biochim Biophys Acta
, vol.1681
, pp. 59-73
-
-
Mohrmann, L.1
Verrijzer, C.P.2
-
14
-
-
0034026193
-
Promoter targeting and chromatin remodeling by the SWI/SNF complex
-
10.1016/S0959-437X(00)00068-X, 10753786
-
Peterson CL, Workman JL. Promoter targeting and chromatin remodeling by the SWI/SNF complex. Curr Opin Genet Dev 2000, 10:187-192. 10.1016/S0959-437X(00)00068-X, 10753786.
-
(2000)
Curr Opin Genet Dev
, vol.10
, pp. 187-192
-
-
Peterson, C.L.1
Workman, J.L.2
-
15
-
-
3242680774
-
Molecular Architecture of the S. cerevisiae SAGA Complex
-
10.1016/j.molcel.2004.06.005, 15260971
-
Wu P-YJ, Ruhlmann C, Winston F, Schultz P. Molecular Architecture of the S. cerevisiae SAGA Complex. Molecular Cell 2004, 15:199-208. 10.1016/j.molcel.2004.06.005, 15260971.
-
(2004)
Molecular Cell
, vol.15
, pp. 199-208
-
-
Wu, P.-Y.J.1
Ruhlmann, C.2
Winston, F.3
Schultz, P.4
-
16
-
-
2642635832
-
Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP
-
10.1101/gad.12.11.1678, 316871, 9620854
-
Chamberlain JR, Lee Y, Lane WS, Engelke DR. Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP. Genes Dev 1998, 12:1678-1690. 10.1101/gad.12.11.1678, 316871, 9620854.
-
(1998)
Genes Dev
, vol.12
, pp. 1678-1690
-
-
Chamberlain, J.R.1
Lee, Y.2
Lane, W.S.3
Engelke, D.R.4
-
17
-
-
70350539592
-
Hijacking the chromatin remodeling machinery: impact of SWI/SNF perturbations in cancer
-
10.1158/0008-5472.CAN-09-2166, 3272668, 19843852
-
Weissman B, Knudsen KE. Hijacking the chromatin remodeling machinery: impact of SWI/SNF perturbations in cancer. Cancer Res 2009, 69:8223-8230. 10.1158/0008-5472.CAN-09-2166, 3272668, 19843852.
-
(2009)
Cancer Res
, vol.69
, pp. 8223-8230
-
-
Weissman, B.1
Knudsen, K.E.2
-
18
-
-
79959653996
-
SWI/SNF nucleosome remodellers and cancer
-
10.1038/nrc3068, 21654818
-
Wilson BG, Roberts CW. SWI/SNF nucleosome remodellers and cancer. Nat Rev Cancer 2011, 11:481-492. 10.1038/nrc3068, 21654818.
-
(2011)
Nat Rev Cancer
, vol.11
, pp. 481-492
-
-
Wilson, B.G.1
Roberts, C.W.2
-
19
-
-
0142215475
-
Global analysis of protein expression in yeast
-
10.1038/nature02046, 14562106
-
Ghaemmaghami S, Huh WK, Bower K, Howson RW, Belle A, Dephoure N, O'Shea EK, Weissman JS. Global analysis of protein expression in yeast. Nature 2003, 425:737-741. 10.1038/nature02046, 14562106.
-
(2003)
Nature
, vol.425
, pp. 737-741
-
-
Ghaemmaghami, S.1
Huh, W.K.2
Bower, K.3
Howson, R.W.4
Belle, A.5
Dephoure, N.6
O'Shea, E.K.7
Weissman, J.S.8
-
20
-
-
34247629588
-
Genetic reconstruction of a functional transcriptional regulatory network
-
10.1038/ng2012, 17417638
-
Hu Z, Killion PJ, Iyer VR. Genetic reconstruction of a functional transcriptional regulatory network. Nat Genet 2007, 39:683-687. 10.1038/ng2012, 17417638.
-
(2007)
Nat Genet
, vol.39
, pp. 683-687
-
-
Hu, Z.1
Killion, P.J.2
Iyer, V.R.3
-
21
-
-
33748852396
-
Metabolic-state-dependent remodeling of the transcriptome in response to anoxia and subsequent reoxygenation in Saccharomyces cerevisiae
-
10.1128/EC.00107-06, 1563586, 16963631
-
Lai LC, Kosorukoff AL, Burke PV, Kwast KE. Metabolic-state-dependent remodeling of the transcriptome in response to anoxia and subsequent reoxygenation in Saccharomyces cerevisiae. Eukaryot Cell 2006, 5:1468-1489. 10.1128/EC.00107-06, 1563586, 16963631.
-
(2006)
Eukaryot Cell
, vol.5
, pp. 1468-1489
-
-
Lai, L.C.1
Kosorukoff, A.L.2
Burke, P.V.3
Kwast, K.E.4
-
22
-
-
67650725820
-
The biology of chromatin remodeling complexes
-
10.1146/annurev.biochem.77.062706.153223, 19355820
-
Clapier CR, Cairns BR. The biology of chromatin remodeling complexes. Annu Rev Biochem 2009, 78:273-304. 10.1146/annurev.biochem.77.062706.153223, 19355820.
-
(2009)
Annu Rev Biochem
, vol.78
, pp. 273-304
-
-
Clapier, C.R.1
Cairns, B.R.2
-
23
-
-
0035726333
-
MGA2 is involved in the low-oxygen response element-dependent hypoxic induction of genes in Saccharomyces cerevisiae
-
10.1128/MCB.21.18.6161-6169.2001, 87333, 11509659
-
Jiang Y, Vasconcelles MJ, Wretzel S, Light A, Martin CE, Goldberg MA. MGA2 is involved in the low-oxygen response element-dependent hypoxic induction of genes in Saccharomyces cerevisiae. Mol Cell Biol 2001, 21:6161-6169. 10.1128/MCB.21.18.6161-6169.2001, 87333, 11509659.
-
(2001)
Mol Cell Biol
, vol.21
, pp. 6161-6169
-
-
Jiang, Y.1
Vasconcelles, M.J.2
Wretzel, S.3
Light, A.4
Martin, C.E.5
Goldberg, M.A.6
-
24
-
-
0034463392
-
Rox1 mediated repression. Oxygen dependent repression in yeast
-
Kastaniotis AJ, Zitomer RS. Rox1 mediated repression. Oxygen dependent repression in yeast. Adv Exp Med Biol 2000, 475:185-195.
-
(2000)
Adv Exp Med Biol
, vol.475
, pp. 185-195
-
-
Kastaniotis, A.J.1
Zitomer, R.S.2
-
25
-
-
34249877438
-
Swi3p controls SWI/SNF assembly and ATP-dependent H2A-H2B displacement
-
10.1038/nsmb1238, 17496903
-
Yang X, Zaurin R, Beato M, Peterson CL. Swi3p controls SWI/SNF assembly and ATP-dependent H2A-H2B displacement. Nat Struct Mol Biol 2007, 14:540-547. 10.1038/nsmb1238, 17496903.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 540-547
-
-
Yang, X.1
Zaurin, R.2
Beato, M.3
Peterson, C.L.4
-
26
-
-
52649141631
-
Architecture of the SWI/SNF-nucleosome complex
-
10.1128/MCB.00693-08, 2547009, 18644858
-
Dechassa ML, Zhang B, Horowitz-Scherer R, Persinger J, Woodcock CL, Peterson CL, Bartholomew B. Architecture of the SWI/SNF-nucleosome complex. Mol Cell Biol 2008, 28:6010-6021. 10.1128/MCB.00693-08, 2547009, 18644858.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 6010-6021
-
-
Dechassa, M.L.1
Zhang, B.2
Horowitz-Scherer, R.3
Persinger, J.4
Woodcock, C.L.5
Peterson, C.L.6
Bartholomew, B.7
-
27
-
-
76749169863
-
Understanding gene sequence variation in the context of transcription regulation in yeast
-
10.1371/journal.pgen.1000800, 2794365, 20066030
-
Gat-Viks I, Meller R, Kupiec M, Shamir R. Understanding gene sequence variation in the context of transcription regulation in yeast. PLoS Genet 2010, 6:e1000800. 10.1371/journal.pgen.1000800, 2794365, 20066030.
-
(2010)
PLoS Genet
, vol.6
-
-
Gat-Viks, I.1
Meller, R.2
Kupiec, M.3
Shamir, R.4
-
28
-
-
63249087504
-
SWI/SNF regulates the cellular response to hypoxia
-
Kenneth NS, Mudie S, van Uden P, Rocha S. SWI/SNF regulates the cellular response to hypoxia. J Biol Chem 2009, 284:4123-4131.
-
(2009)
J Biol Chem
, vol.284
, pp. 4123-4131
-
-
Kenneth, N.S.1
Mudie, S.2
van Uden, P.3
Rocha, S.4
-
29
-
-
34147161066
-
Hypoxia-induced and stress-specific changes in chromatin structure and function
-
10.1016/j.mrfmmm.2006.10.007, 1924842, 17292925
-
Johnson AB, Barton MC. Hypoxia-induced and stress-specific changes in chromatin structure and function. Mutat Res 2007, 618:149-162. 10.1016/j.mrfmmm.2006.10.007, 1924842, 17292925.
-
(2007)
Mutat Res
, vol.618
, pp. 149-162
-
-
Johnson, A.B.1
Barton, M.C.2
-
30
-
-
0142184341
-
Global analysis of protein localization in budding yeast
-
10.1038/nature02026, 14562095
-
Huh WK, Falvo JV, Gerke LC, Carroll AS, Howson RW, Weissman JS, O'Shea EK. Global analysis of protein localization in budding yeast. Nature 2003, 425:686-691. 10.1038/nature02026, 14562095.
-
(2003)
Nature
, vol.425
, pp. 686-691
-
-
Huh, W.K.1
Falvo, J.V.2
Gerke, L.C.3
Carroll, A.S.4
Howson, R.W.5
Weissman, J.S.6
O'Shea, E.K.7
-
31
-
-
0348010307
-
A Mechanism of Oxygen Sensing in Yeast: Multiple Oxygen-Responsive Steps in the Heme Biosynthetic Pathway Affect Hap1 activity
-
10.1074/jbc.M303677200, 14512429
-
Hon T, Dodd A, Dirmeier R, Gorman N, Sinclair PR, Zhang L, Poyton RO. A Mechanism of Oxygen Sensing in Yeast: Multiple Oxygen-Responsive Steps in the Heme Biosynthetic Pathway Affect Hap1 activity. J. Biol. Chem 2003, 278:50771-50780. 10.1074/jbc.M303677200, 14512429.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 50771-50780
-
-
Hon, T.1
Dodd, A.2
Dirmeier, R.3
Gorman, N.4
Sinclair, P.R.5
Zhang, L.6
Poyton, R.O.7
-
32
-
-
0029960517
-
In vivo nuclear transport kinetics in Saccharomyces cerevisiae: a role for heat shock protein 70 during targeting and translocation
-
10.1083/jcb.135.2.329, 2121037, 8896592
-
Shulga N, Roberts P, Gu Z, Spitz L, Tabb MM, Nomura M, Goldfarb DS. In vivo nuclear transport kinetics in Saccharomyces cerevisiae: a role for heat shock protein 70 during targeting and translocation. J Cell Biol 1996, 135:329-339. 10.1083/jcb.135.2.329, 2121037, 8896592.
-
(1996)
J Cell Biol
, vol.135
, pp. 329-339
-
-
Shulga, N.1
Roberts, P.2
Gu, Z.3
Spitz, L.4
Tabb, M.M.5
Nomura, M.6
Goldfarb, D.S.7
-
33
-
-
0033730722
-
The yeast nucleoporin Nup53p specifically interacts with Nic96p and is directly involved in nuclear protein import
-
15044, 11071914
-
Fahrenkrog B, Hubner W, Mandinova A, Pante N, Keller W, Aebi U. The yeast nucleoporin Nup53p specifically interacts with Nic96p and is directly involved in nuclear protein import. Mol Biol Cell 2000, 11:3885-3896. 15044, 11071914.
-
(2000)
Mol Biol Cell
, vol.11
, pp. 3885-3896
-
-
Fahrenkrog, B.1
Hubner, W.2
Mandinova, A.3
Pante, N.4
Keller, W.5
Aebi, U.6
-
34
-
-
33748452139
-
Studying nuclear protein import in yeast
-
10.1016/j.ymeth.2006.07.013, 16979507
-
Leslie DM, Timney B, Rout MP, Aitchison JD. Studying nuclear protein import in yeast. Methods 2006, 39:291-308. 10.1016/j.ymeth.2006.07.013, 16979507.
-
(2006)
Methods
, vol.39
, pp. 291-308
-
-
Leslie, D.M.1
Timney, B.2
Rout, M.P.3
Aitchison, J.D.4
-
35
-
-
0031806619
-
Molecular Mechanism Governing Heme Signaling in Yeast: a Higher-Order Complex Mediates Heme Regulation of the Transcriptional Activator HAP1
-
108966, 9632766
-
Zhang L, Hach A, Wang C. Molecular Mechanism Governing Heme Signaling in Yeast: a Higher-Order Complex Mediates Heme Regulation of the Transcriptional Activator HAP1. Mol Cell Biol 1998, 18:3819-3828. 108966, 9632766.
-
(1998)
Mol Cell Biol
, vol.18
, pp. 3819-3828
-
-
Zhang, L.1
Hach, A.2
Wang, C.3
|