메뉴 건너뛰기




Volumn 4, Issue 5, 2012, Pages 491-501

Epigenetic profile in chronic lymphocytic leukemia using methylation-specific multiplex ligation-dependent probe amplification

Author keywords

CLL; DNA methylation; epigenetic profiling; MS MLPA

Indexed keywords

CDH13 PROTEIN; DAPK1 PROTEIN; DNA; PROTEIN; RARB PROTEIN; TRANSCRIPTION FACTOR GATA 5; TSLC1 PROTEIN; UNCLASSIFIED DRUG; WT1 PROTEIN;

EID: 84868560560     PISSN: 17501911     EISSN: 1750192X     Source Type: Journal    
DOI: 10.2217/epi.12.40     Document Type: Article
Times cited : (10)

References (45)
  • 2
    • 79952384705 scopus 로고    scopus 로고
    • Cancer epigenetics reaches mainstream oncology
    • Rodriguez-Paredes M, Esteller M. Cancer epigenetics reaches mainstream oncology. Nat. Med. 17(3), 330-339 (2011).
    • (2011) Nat. Med , vol.17 , Issue.3 , pp. 330-339
    • Rodriguez-Paredes, M.1    Esteller, M.2
  • 3
    • 40849139208 scopus 로고    scopus 로고
    • Epigenetics in cancer
    • Esteller M. Epigenetics in cancer. N. Engl. J. Med. 358(11), 1148-1159 (2008).
    • (2008) N. Engl. J. Med , vol.358 , Issue.11 , pp. 1148-1159
    • Esteller, M.1
  • 4
    • 36148959045 scopus 로고    scopus 로고
    • Molecular profiling of chronic lymphocytic leukaemia: Genetics meets epigenetics to identify predisposing genes
    • DOI 10.1111/j.1365-2141.2007.06875.x
    • Plass C, Byrd JC, Raval A, Tanner SM, de la Chapelle A. Molecular profiling of chronic lymphocytic leukaemia: Genetics meets epigenetics to identify predisposing genes. Br. J. Haematol. 139(5), 744-752 (2007). (Pubitemid 350115737)
    • (2007) British Journal of Haematology , vol.139 , Issue.5 , pp. 744-752
    • Plass, C.1    Byrd, J.C.2    Raval, A.3    Tanner, S.M.4    De La Chapelle, A.5
  • 7
    • 75649133610 scopus 로고    scopus 로고
    • Differential genome-Wide array-Based methylation profiles in prognostic subsets of chronic lymphocytic leukemia
    • Kanduri M, Cahill N, Goransson H et al. Differential genome-Wide array-Based methylation profiles in prognostic subsets of chronic lymphocytic leukemia. Blood 115(2), 296-305 (2010).
    • (2010) Blood , vol.115 , Issue.2 , pp. 296-305
    • Kanduri, M.1    Cahill, N.2    Goransson, H.3
  • 8
    • 77957370748 scopus 로고    scopus 로고
    • Genome-Wide DNA methylation profiling of chronic lymphocytic leukemia allows identification of epigenetically repressed molecular pathways with clinical impact
    • Tong WG, Wierda WG, Lin E et al. Genome-Wide DNA methylation profiling of chronic lymphocytic leukemia allows identification of epigenetically repressed molecular pathways with clinical impact. Epigenetics 5(6), 499-508 (2010).
    • (2010) Epigenetics , vol.5 , Issue.6 , pp. 499-508
    • Tong, W.G.1    Wierda, W.G.2    Lin, E.3
  • 9
    • 34249827572 scopus 로고    scopus 로고
    • Progressive disease in chronic lymphocytic leukemia is correlated with the DNA methylation index
    • DOI 10.1016/j.leukres.2006.07.007, PII S0145212606002694
    • Yu MK, Bergonia H, Szabo A, Phillips JD. Progressive disease in chronic lymphocytic leukemia is correlated with the DNA methylation index. Leuk. Res. 31(6), 773-777 (2007). (Pubitemid 46855887)
    • (2007) Leukemia Research , vol.31 , Issue.6 , pp. 773-777
    • Yu, M.K.1    Bergonia, H.2    Szabo, A.3    Phillips, J.D.4
  • 10
    • 79952389811 scopus 로고    scopus 로고
    • Methylation markers identify high risk patients in IGHV mutated chronic lymphocytic leukemia
    • Irving L, Mainou-Fowler T, Parker A, Ibbotson RE, Oscier DG, Strathdee G. Methylation markers identify high risk patients in IGHV mutated chronic lymphocytic leukemia. Epigenetics 6(3), 300-306 (2011).
    • (2011) Epigenetics , vol.6 , Issue.3 , pp. 300-306
    • Irving, L.1    Mainou-Fowler, T.2    Parker, A.3    Ibbotson, R.E.4    Oscier, D.G.5    Strathdee, G.6
  • 11
    • 79951499200 scopus 로고    scopus 로고
    • Biological and clinical relevance of quantitative global methylation of repetitive DNA sequences in chronic lymphocytic leukemia
    • Fabris S, Bollati V, Agnelli L et al. Biological and clinical relevance of quantitative global methylation of repetitive DNA sequences in chronic lymphocytic leukemia. Epigenetics 6(2), 188-194 (2011).
    • (2011) Epigenetics 6 , vol.2 , pp. 188-194
    • Fabris, S.1    Bollati, V.2    Agnelli, L.3
  • 12
    • 77954126563 scopus 로고    scopus 로고
    • Large-scale analysis of DNA methylation in chronic lymphocytic leukemia
    • Rahmatpanah FB, Carstens S, Hooshmand SI et al. Large-scale analysis of DNA methylation in chronic lymphocytic leukemia. Epigenomics 1(1), 39-61 (2009).
    • (2009) Epigenomics , vol.1 , Issue.1 , pp. 39-61
    • Rahmatpanah, F.B.1    Carstens, S.2    Hooshmand, S.I.3
  • 16
    • 0037330832 scopus 로고    scopus 로고
    • Microsatellite instability and hMLH1 promoter hypermethylation in Richter's transformation of chronic lymphocytic leukemia
    • DOI 10.1038/sj.leu.2402792
    • Fulop Z, Csernus B, Timar B, Szepesi A, Matolcsy A. Microsatellite instability and hMLH1 promoter hypermethylation in Richter's transformation of chronic lymphocytic leukemia. Leukemia 17(2), 411-415 (2003). (Pubitemid 36266919)
    • (2003) Leukemia , vol.17 , Issue.2 , pp. 411-415
    • Fulop, Z.1    Csernus, B.2    Timar, B.3    Szepesi, A.4    Matolcsy, A.5
  • 17
    • 77955450160 scopus 로고    scopus 로고
    • The implications of heterogeneous DNA methylation for the accurate quantification of methylation
    • Mikeska T, Candiloro IL, Dobrovic A. The implications of heterogeneous DNA methylation for the accurate quantification of methylation. Epigenomics 2(4), 561-573 (2010).
    • (2010) Epigenomics , vol.2 , Issue.4 , pp. 561-573
    • Mikeska, T.1    Candiloro, I.L.2    Dobrovic, A.3
  • 18
    • 24044464247 scopus 로고    scopus 로고
    • Methylation-specific MLPA (MS-MLPA): Simultaneous detection of CpG methylation and copy number changes of up to 40 sequences
    • Nygren AO, Ameziane N, Duarte HM et al. Methylation-specific MLPA (MS-MLPA): Simultaneous detection of CpG methylation and copy number changes of up to 40 sequences. Nucleic Acids Res. 33(14), e128 (2005).
    • (2005) Nucleic Acids Res , vol.33 , Issue.14
    • Nygren, A.O.1    Ameziane, N.2    Duarte, H.M.3
  • 19
    • 77957159323 scopus 로고    scopus 로고
    • Epigenetic regulation of CD44 in Hodgkin and non-Hodgkin lymphoma
    • Eberth S, Schneider B, Rosenwald A et al. Epigenetic regulation of CD44 in Hodgkin and non-Hodgkin lymphoma. BMC Cancer 10, 517 (2010).
    • (2010) BMC Cancer , vol.10 , pp. 517
    • Eberth, S.1    Schneider, B.2    Rosenwald, A.3
  • 20
    • 70450237107 scopus 로고    scopus 로고
    • Hypomethylation and expression of bex2 igsf4 and timp3 indicative of mll translocations in acute myeloid leukemia
    • Rohrs S, Dirks WG, Meyer C et al. Hypomethylation and expression of BEX2, IGSF4 and TIMP3 indicative of MLL translocations in acute myeloid leukemia. Mol. Cancer 8, 86 (2009).
    • (2009) Mol. Cancer , vol.8 , pp. 86
    • Rohrs, S.1    Dirks, W.G.2    Meyer, C.3
  • 21
    • 79953678639 scopus 로고    scopus 로고
    • Methylation profiling of rectal cancer identifies novel markers of early-stage disease
    • Leong KJ, Wei W, Tannahill LA et al. Methylation profiling of rectal cancer identifies novel markers of early-stage disease. Br. J. Surg. 98(5), 724-734 (2011).
    • (2011) Br. J. Surg , vol.98 , Issue.5 , pp. 724-734
    • Leong, K.J.1    Wei, W.2    Tannahill, L.A.3
  • 23
    • 77749298186 scopus 로고    scopus 로고
    • Aspirin induces apoptosis in human leukemia cells independently of NF-κB and MAPKs through alteration of the Mcl-1/Noxa balance
    • Iglesias-Serret D, Pique M, Barragan M et al. Aspirin induces apoptosis in human leukemia cells independently of NF-κB and MAPKs through alteration of the Mcl-1/Noxa balance. Apoptosis 15(2), 219-229 (2010).
    • (2010) Apoptosis , vol.15 , Issue.2 , pp. 219-229
    • Iglesias-Serret, D.1    Pique, M.2    Barragan, M.3
  • 25
  • 26
    • 0033179375 scopus 로고    scopus 로고
    • Concurrent DNA hypermethylation of multiple genes in acute myeloid leukemia
    • Melki JR, Vincent PC, Clark SJ. Concurrent DNA hypermethylation of multiple genes in acute myeloid leukemia. Cancer Res. 59(15), 3730-3740 (1999). (Pubitemid 29381880)
    • (1999) Cancer Research , vol.59 , Issue.15 , pp. 3730-3740
    • Melki, J.R.1    Vincent, P.C.2    Clark, S.J.3
  • 27
    • 67349175004 scopus 로고    scopus 로고
    • Long-Range epigenetic silencing at 2q14.2 affects most human colorectal cancers and may have application as a non-invasive biomarker of disease
    • Mayor R, Casadome L, Azuara D et al. Long-Range epigenetic silencing at 2q14.2 affects most human colorectal cancers and may have application as a non-invasive biomarker of disease. Br. J. Cancer 100(10), 1534-1539 (2009).
    • (2009) Br. J. Cancer , vol.100 , Issue.10 , pp. 1534-1539
    • Mayor, R.1    Casadome, L.2    Azuara, D.3
  • 28
    • 0026546877 scopus 로고
    • A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands
    • Frommer M, McDonald LE, Millar DS et al. A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands. Proc. Natl Acad. Sci. USA 89(5), 1827-1831 (1992).
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , Issue.5 , pp. 1827-1831
    • Frommer, M.1    McDonald, L.E.2    Millar, D.S.3
  • 29
    • 0033564351 scopus 로고    scopus 로고
    • Hypermethylation of the DAP-kinase CpG island is a common alteration in B-cell malignancies
    • Katzenellenbogen RA, Baylin SB, Herman JG. Hypermethylation of the DAP-kinase CpG island is a common alteration in B-Cell malignancies. Blood 93(12), 4347-4353 (1999). (Pubitemid 29279278)
    • (1999) Blood , vol.93 , Issue.12 , pp. 4347-4353
    • Katzenellenbogen, R.A.1    Baylin, S.B.2    Herman, J.G.3
  • 32
    • 33748657136 scopus 로고    scopus 로고
    • Frequent DAP kinase but not p14 or Apaf-1 hypermethylation in B-cell chronic lymphocytic leukemia
    • DOI 10.1007/s10038-006-0029-x
    • Chim CS, Fung TK, Wong KF, Lau JS, Liang R. Frequent DAP kinase but not p14 or Apaf-1 hypermethylation in B-Cell chronic lymphocytic leukemia. J. Hum. Genet. 51(9), 832-838 (2006). (Pubitemid 44386830)
    • (2006) Journal of Human Genetics , vol.51 , Issue.9 , pp. 832-838
    • Chim, C.S.1    Fung, T.K.2    Wong, K.F.3    Lau, J.S.4    Liang, R.5
  • 33
    • 67650912362 scopus 로고    scopus 로고
    • CpG island methylation patterns in chronic lymphocytic leukemia
    • Seeliger B, Wilop S, Osieka R, Galm O, Jost E. CpG island methylation patterns in chronic lymphocytic leukemia. Leuk. Lymphoma 50(3), 419-426 (2009).
    • (2009) Leuk. Lymphoma , vol.50 , Issue.3 , pp. 419-426
    • Seeliger, B.1    Wilop, S.2    Osieka, R.3    Galm, O.4    Jost, E.5
  • 34
    • 84856555311 scopus 로고    scopus 로고
    • A DNA methylation fingerprint of 1628 human samples
    • Fernandez AF, Assenov Y, Martin-Subero JI et al. A DNA methylation fingerprint of 1628 human samples. Genome Res. 22(2), 407-419 (2012).
    • (2012) Genome Res , vol.22 , Issue.2 , pp. 407-419
    • Fernandez, A.F.1    Assenov, Y.2    Martin-Subero, J.I.3
  • 36
    • 33748855626 scopus 로고    scopus 로고
    • Methylation of INK4 and CIP/KIP families of cyclin-dependent kinase inhibitor in chronic lymphocytic leukaemia in Chinese patients
    • DOI 10.1136/jcp.2005.035089
    • Chim CS, Fung TK, Wong KF, Lau JS, Law M, Liang R. Methylation of INK4 and CIP/KIP families of cyclin-dependent kinase inhibitor in chronic lymphocytic leukaemia in Chinese patients. J. Clin. Pathol. 59(9), 921-926 (2006). (Pubitemid 44422844)
    • (2006) Journal of Clinical Pathology , vol.59 , Issue.9 , pp. 921-926
    • Chim, C.S.1    Fung, T.K.2    Wong, K.F.3    Lau, J.S.4    Law, M.5    Liang, R.6
  • 37
    • 34548734299 scopus 로고    scopus 로고
    • Ultradeep bisulfite sequencing analysis of DNA methylation patterns in multiple gene promoters by 454 sequencing
    • DOI 10.1158/0008-5472.CAN-07-1016
    • Taylor KH, Kramer RS, Davis JW et al. Ultradeep bisulfite sequencing analysis of DNA methylation patterns in multiple gene promoters by 454 sequencing. Cancer Res. 67(18), 8511-8518 (2007). (Pubitemid 47437425)
    • (2007) Cancer Research , vol.67 , Issue.18 , pp. 8511-8518
    • Taylor, K.H.1    Kramer, R.S.2    Davis, J.W.3    Guo, J.4    Duff, D.J.5    Xu, D.6    Caldwell, C.W.7    Shi, H.8
  • 42
    • 23744468972 scopus 로고    scopus 로고
    • Expression and methylation status of the FHIT gene in acute myeloid leukemia and myelodysplastic syndrome
    • DOI 10.1038/sj.leu.2403805
    • Iwai M, Kiyoi H, Ozeki K et al. Expression and methylation status of the FHIT gene in acute myeloid leukemia and myelodysplastic syndrome. Leukemia 19(8), 1367-1375 (2005). (Pubitemid 41136330)
    • (2005) Leukemia , vol.19 , Issue.8 , pp. 1367-1375
    • Iwai, M.1    Kiyoi, H.2    Ozeki, K.3    Kinoshita, T.4    Emi, N.5    Ohno, R.6    Naoe, T.7
  • 43
    • 0032523043 scopus 로고    scopus 로고
    • P16(INK4a) gene inactivation by deletions, mutations, and hypermethylation is associated with transformed and aggressive variants of non-Hodgkin's lymphomas
    • Pinyol M, Cobo F, Bea S et al. p16(INK4a) gene inactivation by deletions, mutations, and hypermethylation is associated with transformed and aggressive variants of non-Hodgkin's lymphomas. Blood 91(8), 2977-2984 (1998). (Pubitemid 28227549)
    • (1998) Blood , vol.91 , Issue.8 , pp. 2977-2984
    • Pinyol, M.1    Cobo, F.2    Bea, S.3    Jares, P.4    Nayach, I.5    Fernandez, P.L.6    Montserrat, E.7    Cardesa, A.8    Campo, E.9
  • 44
    • 33645057939 scopus 로고    scopus 로고
    • Mutational and methylation analysis of the cyclin-dependent kinase 4 inhibitor (p16INK4A) gene in chronic lymphocytic leukemia
    • Tsirigotis P, Pappa V, Labropoulos S et al. Mutational and methylation analysis of the cyclin-dependent kinase 4 inhibitor (p16INK4A) gene in chronic lymphocytic leukemia. Eur. J. Haematol. 76(3), 230-236 (2006).
    • (2006) Eur. J. Haematol , vol.76 , Issue.3 , pp. 230-236
    • Tsirigotis, P.1    Pappa, V.2    Labropoulos, S.3
  • 45
    • 48749095241 scopus 로고    scopus 로고
    • Multiplex ligation-dependent probe amplification for detection of genomic alterations in chronic lymphocytic leukaemia
    • Coll-Mulet L, Santidrian AF, Cosialls AM et al. Multiplex ligation-dependent probe amplification for detection of genomic alterations in chronic lymphocytic leukaemia. Br. J. Haematol. 142(5), 793-801 (2008).
    • (2008) Br. J. Haematol , vol.142 , Issue.5 , pp. 793-801
    • Coll-Mulet, L.1    Santidrian, A.F.2    Cosialls, A.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.