메뉴 건너뛰기




Volumn 33, Issue 2, 2012, Pages 227-255

Uncovering spatial topology represented by rat hippocampal population neuronal codes

Author keywords

Expectation maximization; Force based algorithm; Hidden Markov model; Place cells; Population codes; Spatial topology; Variational Bayesian inference

Indexed keywords

BAYESIAN NETWORKS; BRAIN; CODES (SYMBOLS); HIDDEN MARKOV MODELS; IMAGE SEGMENTATION; INFERENCE ENGINES; MAXIMUM PRINCIPLE; NAVIGATION; NEURONS; POPULATION STATISTICS;

EID: 84868194534     PISSN: 09295313     EISSN: 15736873     Source Type: Journal    
DOI: 10.1007/s10827-012-0384-x     Document Type: Article
Times cited : (32)

References (64)
  • 1
    • 0038030649 scopus 로고    scopus 로고
    • Learning and inference in hierarchical models with singularities
    • Amari, S., Ozeki, T., & Park, H-Y. (2003). Learning and inference in hierarchical models with singularities. Systems and Computers in Japan, 34(7), 34-42.
    • (2003) Systems and Computers in Japan , vol.34 , Issue.7 , pp. 34-42
    • Amari, S.1    Ozeki, T.2    Park, H.-Y.3
  • 2
    • 0000353178 scopus 로고
    • A maximization technique occurring in the statistical analysis of probabilistic functions of markov chains
    • Baum, L. E., Petrie, T., Soules, G., & Weiss, N. (1970). A maximization technique occurring in the statistical analysis of probabilistic functions of Markov chains. Annals of Mathematical Statistics, 41(1), 164-171.
    • (1970) Annals of Mathematical Statistics , vol.41 , Issue.1 , pp. 164-171
    • Baum, L.E.1    Petrie, T.2    Soules, G.3    Weiss, N.4
  • 5
    • 0003787146 scopus 로고
    • Boston: Princeton University Press
    • Bellman, R. (1957). Dynamic programming. Boston: Princeton University Press.
    • (1957) Dynamic Programming.
    • Bellman, R.1
  • 8
    • 0000675167 scopus 로고    scopus 로고
    • Structure learning in conditional probability models via an entropic prior and parameter extinction
    • Brand, M. (1999). Structure learning in conditional probability models via an entropic prior and parameter extinction. Neural Computation, 11, 1155-1182.
    • (1999) Neural Computation , vol.11 , pp. 1155-1182
    • Brand, M.1
  • 10
    • 0032530363 scopus 로고    scopus 로고
    • A statistical paradigm for neural spike train decoding applied to position prediction from ensemble firing patterns of rat hippocampal place cells
    • Brown, E. N., Frank, L. M., Tang, D., Quirk, M. C., & Wilson, M. A. (1998). A statistical paradigm for neural spike train decoding applied to position prediction from ensemble firing patterns of rat hippocampal place cells. Journal of Neuroscience, 18, 7411-7425. (Pubitemid 28425825)
    • (1998) Journal of Neuroscience , vol.18 , Issue.18 , pp. 7411-7425
    • Brown, E.N.1    Frank, L.M.2    Tang, D.3    Quirk, M.C.4    Wilson, M.A.5
  • 11
    • 84912057909 scopus 로고    scopus 로고
    • London, UK: Oxford University Press
    • Buzsaki, G. (2006). Rhythms of the brain. London, UK: Oxford University Press.
    • (2006) Rhythms of the brain
    • Buzsaki, G.1
  • 13
    • 68349146850 scopus 로고    scopus 로고
    • Discrete-and continuous-time probabilistic models and algorithms for inferring neuronalup anddownstates
    • Chen, Z., Vijayan, S., Barbieri, R., Wilson, M. A., &Brown, E. N. (2009). Discrete-and continuous-time probabilistic models and algorithms for inferring neuronalUP andDOWNstates. Neural Computation, 21(7), 1797-1862.
    • (2009) Neural Computation , vol.21 , Issue.7 , pp. 1797-1862
    • Chen, Z.1    Vijayan, S.2    Barbieri, R.3    Wilson, M.A.4    Brown, E.N.5
  • 16
    • 55449121975 scopus 로고    scopus 로고
    • Cell groups reveal structure of stimulus space
    • Curto, C., & Itskov, V. (2008). Cell groups reveal structure of stimulus space. PLoS Computational Biology, 4, e1000205.
    • (2008) PLoS Computational Biology , vol.4
    • Curto, C.1    Itskov, V.2
  • 18
    • 80051733187 scopus 로고    scopus 로고
    • Spatial-temporal clustering of neural data using linked-mixtures of hidden markov models
    • Article ID 892461
    • Darmanjian, S.,&Principe, J. C. (2009). Spatial-temporal clustering of neural data using linked-mixtures of hidden Markov models. EURASIP Journal on Advances in Signal Processing, 2009, Article ID 892461.
    • (2009) EURASIP Journal on Advances in Signal Processing , vol.2009
    • Darmanjian, S.1    Principe, J.C.2
  • 19
    • 68949157061 scopus 로고    scopus 로고
    • Hippocampal replay of extended experience
    • Davidson, T. J., Kloosterman, F., & Wilson, M. A. (2009). Hippocampal replay of extended experience. Neuron, 63, 497-507.
    • (2009) Neuron , vol.63 , pp. 497-507
    • Davidson, T.J.1    Kloosterman, F.2    Wilson, M.A.3
  • 21
    • 34748889593 scopus 로고    scopus 로고
    • Forward and reverse hippocampal place-cell sequences during ripples
    • DOI 10.1038/nn1961, PII NN1961
    • Diba, K., & Buzsaki, G. (2007). Forward and reverse hippocampal place-cell sequences during ripples. Nature Neuroscience, 10, 1241-1242. (Pubitemid 47480292)
    • (2007) Nature Neuroscience , vol.10 , Issue.10 , pp. 1241-1242
    • Diba, K.1    Buzsaki, G.2
  • 22
    • 78751648822 scopus 로고    scopus 로고
    • Preplay of future place cell sequences by hippocampal cellular assemblies
    • Dragoi, G., & Tonegawa, S. (2011). Preplay of future place cell sequences by hippocampal cellular assemblies. Nature, 469, 397-401.
    • (2011) Nature , Issue.469 , pp. 397-401
    • Dragoi, G.1    Tonegawa, S.2
  • 23
    • 4444262376 scopus 로고    scopus 로고
    • Hippocampal plasticity across multiple days of exposure to novel environments
    • DOI 10.1523/JNEUROSCI.1958-04.2004
    • Frank, L. M., Stanley, G. B., & Brown, E. N. (2004) Hippocampal plasticity across multiple days of exposure to novel environments. Journal of Neuroscience, 24, 7681-7689. (Pubitemid 39186823)
    • (2004) Journal of Neuroscience , vol.24 , Issue.35 , pp. 7681-7689
    • Frank, L.M.1    Stanley, G.B.2    Brown, E.N.3
  • 24
    • 33645458694 scopus 로고    scopus 로고
    • Reverse replay of behavioural sequences in hippocampal place cells during the awake state
    • Foster, D. J., & Wilson, M. A. (2006). Reverse replay of behavioural sequences in hippocampal place cells during the awake state. Nature, 440, 680-683.
    • (2006) Nature , vol.440 , pp. 680-683
    • Foster, D.J.1    Wilson, M.A.2
  • 27
    • 0043069766 scopus 로고    scopus 로고
    • Organization of cell assemblies in the hippocampus
    • DOI 10.1038/nature01834
    • Harris, K., Csicsvari, J., Hirase, H., Dragoi, G., & Buzsaki, G. (2003). Organization of cell assemblies in the hippocampus. Nature, 424, 552-556. (Pubitemid 36975776)
    • (2003) Nature , vol.424 , Issue.6948 , pp. 552-556
    • Harris, K.D.1    Csicsvari, J.2    Hirase, H.3    Dragoi, G.4    Buzsaki, G.5
  • 29
    • 36949008149 scopus 로고    scopus 로고
    • Network dynamics of hippocampal cell-assemblies resemble multiple spatial maps within single tasks
    • DOI 10.1002/hipo.20359
    • Jackson, J., & Redish, A. D. (2007). Network dynamics of hippocampal cell-assembliesresemble multiple spatial maps within single tasks. Hippocampus, 17, 1209-1229. (Pubitemid 350244237)
    • (2007) Hippocampus , vol.17 , Issue.12 , pp. 1209-1229
    • Jackson, J.1    Redish, A.D.2
  • 30
    • 33845882729 scopus 로고    scopus 로고
    • Coordinated memory replay in the visual cortex and hippocampus during sleep
    • DOI 10.1038/nn1825, PII NN1825
    • Ji,D.,&Wilson, M. A. (2007). Coordinatedmemory replay in the visual cortex and hippocampus during sleep. Nature Neuroscience, 10, 100-107. (Pubitemid 46026533)
    • (2007) Nature Neuroscience , vol.10 , Issue.1 , pp. 100-107
    • Ji, D.1    Wilson, M.A.2
  • 31
    • 33144490533 scopus 로고    scopus 로고
    • Variational Bayes for continuous hidden Markov models and its application to active learning
    • DOI 10.1109/TPAMI.2006.85
    • Ji, S., Krishnapuram, B., & Carin, L. (2006). Variational Bayes for continuous hidden Markov models and its application to active learning. IEEE Transactions on Pattern Analysis and Machine Intelligence, 28(4), 522-532. (Pubitemid 43264651)
    • (2006) IEEE Transactions on Pattern Analysis and Machine Intelligence , vol.28 , Issue.4 , pp. 522-532
    • Ji, S.1    Krishnapuram, B.2    Carin, L.3
  • 33
    • 67649769032 scopus 로고    scopus 로고
    • Awake replay of remote experiences in the hippocampus
    • Karlsson, M. P., & Frank, L. M. (2009). Awake replay of remote experiences in the hippocampus. Nature Neuroscience, 12, 913-918.
    • (2009) Nature Neuroscience , vol.12 , pp. 913-918
    • Karlsson, M.P.1    Frank, L.M.2
  • 34
    • 78149344985 scopus 로고    scopus 로고
    • Extracting state transition dynamics from multiple spike trains using hidden Markov models with correlated Poisson distribution
    • Katahira, K., Nishikawa, J., Okanoya, K., & Okada, M. (2010). Extracting state transition dynamics from multiple spike trains using hidden Markov models with correlated Poisson distribution. Neural Computation, 22, 2369-2389.
    • (2010) Neural Computation , Issue.22 , pp. 2369-2389
    • Katahira, K.1    Nishikawa, J.2    Okanoya, K.3    Okada, M.4
  • 36
    • 57149085744 scopus 로고    scopus 로고
    • Detecting neural-state transitions using hidden markov models for motor cortical prostheses
    • Kemere, C., Santhanam, G., Yu, B. M., Afshar, A., Ryu, S. I., Meng, T. H., et al. (2008). Detecting neural-state transitions using hidden Markov models for motor cortical prostheses. Journal of Neurophysiology, 100(4), 2441-2452.
    • (2008) Journal of Neurophysiology , vol.100 , Issue.4 , pp. 2441-2452
    • Kemere, C.1    Santhanam, G.2    Yu, B.M.3    Afshar, A.4    Ryu, S.I.5    Meng, T.H.6
  • 37
    • 0037137681 scopus 로고    scopus 로고
    • Memory of sequential experience in the hippocampus during slow wave sleep
    • DOI 10.1016/S0896-6273(02)01096-6
    • Lee, A. K., & Wilson, M. A. (2002). Memory of sequential experience in the hippocampus during slow wave sleep. Neuron, 36, 1183-1194. (Pubitemid 36044517)
    • (2002) Neuron , vol.36 , Issue.6 , pp. 1183-1194
    • Lee, A.K.1    Wilson, M.A.2
  • 38
    • 0037034801 scopus 로고    scopus 로고
    • Long-term plasticity in hippocampal place-cell representation of environmental geometry
    • DOI 10.1038/416090a
    • Lever, C., Wills, T., Cacucci, F., Burgess, N., & O'Keefe, J. (2002). Long-term plasticity in hippocampal place-cell representation of environmental geometry. Nature, 416, 90-94. (Pubitemid 34215406)
    • (2002) Nature , vol.416 , Issue.6876 , pp. 90-94
    • Lever, C.1    Wills, T.2    Cacucci, F.3    Burgess, N.4    O'Keefe, J.5
  • 39
    • 0035135429 scopus 로고    scopus 로고
    • Temporally structured replay of awake hippocampal ensemble activity during rapid eye movement sleep
    • DOI 10.1016/S0896-6273(01)00186-6
    • Louie, K., & Wilson, M. A. (2001). Temporally structured REM sleep replay of awake hippocampal ensemble activity. Neuron, 29, 145-156. (Pubitemid 32108728)
    • (2001) Neuron , vol.29 , Issue.1 , pp. 145-156
    • Louie, K.1    Wilson, M.A.2
  • 47
    • 0024610919 scopus 로고
    • A tutorial on hidden markov models and selected applications in speech recognition
    • Rabiner, L. R. (1989). A tutorial on hidden Markov models and selected applications in speech recognition. Proceedings of the IEEE, 77(2), 257-286.
    • (1989) Proceedings of the IEEE , vol.77 , Issue.2 , pp. 257-286
    • Rabiner, L.R.1
  • 49
    • 74349108996 scopus 로고    scopus 로고
    • Em versus markov chain monte carlo for estimation of hidden markov models: A computational perspective
    • Rydén, T. (2008). EM versus Markov chain Monte Carlo for estimation of hidden Markov models: A computational perspective. Bayesian Analysis, 3(4), 659-688.
    • (2008) Bayesian Analysis , vol.3 , Issue.4 , pp. 659-688
    • Rydén, T.1
  • 50
    • 0036489069 scopus 로고    scopus 로고
    • Bayesian methods for hidden markov models: Recursive computing in the 21st century
    • Scott, S. L. (2002). Bayesian methods for hidden Markov models: Recursive computing in the 21st century. Journal of the American Statistical Association, 97, 337-351.
    • (2002) Journal of the American Statistical Association , vol.97 , pp. 337-351
    • Scott, S.L.1
  • 51
    • 0030012117 scopus 로고    scopus 로고
    • Replay of neuronal firing sequences in rat hippocampus during sleep following spatial experience
    • Skaggs, W. E., & McNaughton, B. L. (1996). Replay of neuronal firing sequences in rat hippocampus during sleep following spatial experience. Science, 271, 1870-1873. (Pubitemid 26112314)
    • (1996) Science , vol.271 , Issue.5257 , pp. 1870-1873
    • Skaggs, W.E.1    McNaughton, B.L.2
  • 54
    • 12544253489 scopus 로고    scopus 로고
    • A point process framework for relating neural spiking activity to spiking history, neural ensemble and covariate effects
    • Truccolo, W., Eden, U. T., Fellow, M., Donoghue, J. P., & Brown, E. N. (2005). A point process framework for relating neural spiking activity to spiking history, neural ensemble and covariate effects. Journal of Neurophysiology, 93, 1074-1089.
    • (2005) Journal of Neurophysiology , vol.93 , pp. 1074-1089
    • Truccolo, W.1    Eden, U.T.2    Fellow, M.3    Donoghue, J.P.4    Brown, E.N.5
  • 56
    • 84935113569 scopus 로고
    • Error bounds for convolutional codes and an asymptotically optimal decoding algorithm
    • Viterbi, J. (1967). Error bounds for convolutional codes and an asymptotically optimal decoding algorithm. IEEE Transactions on Information Theory, 13, 260-269.
    • (1967) IEEE Transactions on Information Theory , vol.13 , pp. 260-269
    • Viterbi, J.1
  • 58
    • 18244386706 scopus 로고    scopus 로고
    • Attractor dynamics in the hippocampal representation of the local environment
    • DOI 10.1126/science.1108905
    • Wills, T., Lever, C., Cacucci, F., Burgess, N.,&O'Keefe, J. (2005). Attractor dynamics in the hippocampal representation of the local environment. Science, 308, 873-876. (Pubitemid 40629271)
    • (2005) Science , vol.308 , Issue.5723 , pp. 873-876
    • Wills, T.J.1    Lever, C.2    Cacucci, F.3    Burgess, N.4    O'Keefe, J.5
  • 59
    • 0027440875 scopus 로고
    • Dynamics of the hippocampal ensemble code for space
    • Wilson, M. A., & McNaughton, B. L. (1993). Dynamics of the hippocampal ensemble code for space. Science, 261, 1055-1058. (Pubitemid 23300867)
    • (1993) Science , vol.261 , Issue.5124 , pp. 1055-1058
    • Wilson, M.A.1    McNaughton, B.L.2
  • 60
    • 0028095260 scopus 로고
    • Reactivation of hippocampal ensemble memories during sleep
    • Wilson, M. A., & McNaughton, B. L. (1994). Reactivation of hippocampal ensemble memories during sleep. Science, 265, 676-679. (Pubitemid 24268281)
    • (1994) Science , vol.265 , Issue.5172 , pp. 676-679
    • Wilson, M.A.1    McNaughton, B.L.2
  • 61
    • 0033697750 scopus 로고    scopus 로고
    • Hippocampal neurons encode information about different types of memory episodes occurring in the same location
    • Wood, E. R., Dudchenko, P. A., Robitsek, R. J., & Eichenbaum, H. (2000). Hippocampal neurons encode information about different types of memory episodes occurring in the same location. Neuron, 27, 623-633.
    • (2000) Neuron , vol.27 , pp. 623-633
    • Wood, E.R.1    Dudchenko, P.A.2    Robitsek, R.J.3    Eichenbaum, H.4
  • 62
    • 79957529326 scopus 로고    scopus 로고
    • A hierarchical bayesian approach for learning spatio-temporal decomposition of multichannel eeg
    • Wu,W., Chen, Z., Gao, S., & Brown, E. N. (2011). A hierarchical Bayesian approach for learning spatio-temporal decomposition of multichannel EEG. NeuroImage, 56(4), 1929-1945.
    • (2011) NeuroImage , vol.56 , Issue.4 , pp. 1929-1945
    • Wu, W.1    Chen, Z.2    Gao, S.3    Brown, E.N.4
  • 63
    • 0032519055 scopus 로고    scopus 로고
    • Probabilistic Interpretation of Population Codes
    • Zemel, R. S., Dayan, P., & Pouget, A. (1998). Probabilistic interpretation of population codes. Neural Computation, 10, 403-430. (Pubitemid 128463159)
    • (1998) Neural Computation , vol.10 , Issue.2 , pp. 403-430
    • Zemel, R.S.1    Dayan, P.2    Pouget, A.3
  • 64
    • 0031930592 scopus 로고    scopus 로고
    • Interpreting neuronal population activity by reconstruction: Unified framework with application to hippocampal place cells
    • Zhang, K., Ginzburg, I., McNaughton, B. L., & Sejnowski, T. J. (1998). Interpreting neuronal population activity by reconstruction: Unified framework with application to hippocampal place cells. Journal of Neurophysiology, 79, 1017-1044. (Pubitemid 28095915)
    • (1998) Journal of Neurophysiology , vol.79 , Issue.2 , pp. 1017-1044
    • Zhang, K.1    Ginzburg, I.2    McNaughton, B.L.3    Sejnowski, T.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.