메뉴 건너뛰기




Volumn 20, Issue 5, 2012, Pages 547-558

The effect of regions of interest and spectral pre-processing on the detection of non-0157 Shiga-toxin producing Escherichia coli serogroups on agar media by hyperspectral imaging

Author keywords

Detection; Escherichia coli; Mahalanobis distance; Pre processing; Regions of interest; STEC non 0157; Visible and near infrared hyperspectral image

Indexed keywords

ALGAE; ERROR DETECTION; ESCHERICHIA COLI; GEOMETRY; INFRARED DEVICES; PIXELS; POLYSACCHARIDES; SPECTROSCOPY;

EID: 84867862292     PISSN: 09670335     EISSN: 17516552     Source Type: Journal    
DOI: 10.1255/jnirs.1004     Document Type: Article
Times cited : (25)

References (33)
  • 2
    • 84855428583 scopus 로고    scopus 로고
    • Shiga toxin-producing Escherichia coli in certain raw beef products, proposed rule
    • USDA
    • USDA, "Shiga Toxin-producing Escherichia coli in certain raw beef products, Proposed Rule." Federal Register 56, 58157 (2011).
    • (2011) Federal Register , vol.56 , pp. 58157
  • 5
    • 0022573629 scopus 로고
    • Sorbitol-MacConkey medium for detection of Escherichia coli 0157:H7 associated with hemorrhagic colitis
    • S. B. March and S. Ratnam, "Sorbitol-MacConkey medium for detection of Escherichia coli 0157:H7 associated with hemorrhagic colitis", J. Clin. Microbiol. 23, 869 (1986).
    • (1986) J. Clin. Microbiol. , vol.23 , pp. 869
    • March, S.B.1    Ratnam, S.2
  • 6
    • 0028086634 scopus 로고
    • Monitoring biomass and glycerol in an Escherichia coli fermentation using near infrared spectroscopy
    • doi: 10.1007/BF00155422
    • G. Macaloney, J. W. Hall, M. J. Rollins, I. Drapper, B. G. Thompson and B. McNeil, "Monitoring biomass and glycerol in an Escherichia coli fermentation using near infrared spectroscopy", Biotechnol. Tech. 8, 281 (1994). doi: 10.1007/BF00155422
    • (1994) Biotechnol. Tech. , vol.8 , pp. 281
    • Macaloney, G.1    Hall, J.W.2    Rollins, M.J.3    Drapper, I.4    Thompson, B.G.5    McNeil, B.6
  • 7
    • 37549062210 scopus 로고    scopus 로고
    • Possibility of using near infrared spectroscopy for evaluation of bacterial contamination in shredded cabbage
    • doi: 10.1111/j.1365-2621.2006.01416.x
    • P. Suthiluk, S. Saranwong, S. Kawano, S. Numthuam and T. Satake, "Possibility of using near infrared spectroscopy for evaluation of bacterial contamination in shredded cabbage", Int. J. Food Sci. Technol. 43, 160 (2008). doi: 10.1111/j.1365-2621.2006.01416.x
    • (2008) Int. J. Food Sci. Technol. , vol.43 , pp. 160
    • Suthiluk, P.1    Saranwong, S.2    Kawano, S.3    Numthuam, S.4    Satake, T.5
  • 8
    • 58649101116 scopus 로고    scopus 로고
    • Changes in the absorption and scattering properties in the near-infrared region during the growth of Bacillus subtilis in liquid culture
    • doi: 10.1366/000370209787169777
    • E. Dzhongova, C. R. Harwood and S. N. Thennadil, "Changes in the absorption and scattering properties in the near-infrared region during the growth of Bacillus subtilis in liquid culture", Appl. Spectrosc. 63, 25 (2009). doi: 10.1366/000370209787169777
    • (2009) Appl. Spectrosc. , vol.63 , pp. 25
    • Dzhongova, E.1    Harwood, C.R.2    Thennadil, S.N.3
  • 9
    • 79959908435 scopus 로고    scopus 로고
    • Detection and identification of selected bacteria, inoculated on chicken breast, using near infrared spectroscopy and chemometrics
    • doi: 10.1007/s11694-011-9111-y
    • D. Alexandrakis, G. Downey and A. G. M. Scannell, "Detection and identification of selected bacteria, inoculated on chicken breast, using near infrared spectroscopy and chemometrics", Sens. Instrumen. Food Qual. 5, 57 (2011). doi: 10.1007/s11694-011-9111-y
    • (2011) Sens. Instrumen. Food Qual. , vol.5 , pp. 57
    • Alexandrakis, D.1    Downey, G.2    Scannell, A.G.M.3
  • 10
    • 45549089233 scopus 로고    scopus 로고
    • Detection and identification of bacteria in an isolated system with near-infrared spectroscopy and multivariate analysis
    • doi: 10.1021/jf073407x
    • D. Alexandrakis, G. Downey and A. G. M. Scannell, "Detection and identification of bacteria in an isolated system with near-infrared spectroscopy and multivariate analysis", Agric. Food Chem. 56, 3431 (2008). doi: 10.1021/jf073407x
    • (2008) Agric. Food Chem. , vol.56 , pp. 3431
    • Alexandrakis, D.1    Downey, G.2    Scannell, A.G.M.3
  • 11
    • 0035829298 scopus 로고    scopus 로고
    • Discrimnination, classification, identification of microorganisms using FTIR spectroscopy and chemometrics
    • doi: 10.1016/S0924-2031 01 00113-8
    • L. Mariey, J. P. Signolle, C. Amiel and J. Travert, " Discrimnination, classification, identification of microorganisms using FTIR spectroscopy and chemometrics", Vib. Spectrosc. 26, 151 (2001). doi: 10.1016/S0924-2031 (01) 00113-8
    • (2001) Vib. Spectrosc. , vol.26 , pp. 151
    • Mariey, L.1    Signolle, J.P.2    Amiel, C.3    Travert, J.4
  • 13
    • 58649109371 scopus 로고    scopus 로고
    • Spectroscopic imaging for detection and discrimination of different E. coli strains
    • doi: 10.1366/000370209787169849
    • M. K. Glibert, C. Frick, A. Wodowski and F. Vogt, "Spectroscopic imaging for detection and discrimination of different E. coli strains", Appl. Spectrosc. 63, 6 (2009). doi: 10.1366/000370209787169849
    • (2009) Appl. Spectrosc. , vol.63 , pp. 6
    • Glibert, M.K.1    Frick, C.2    Wodowski, A.3    Vogt, F.4
  • 15
    • 33748427775 scopus 로고    scopus 로고
    • Rapid detection and identification of Pseudomonas aeruginosa and Escherichia coli as pure and mixed cultures in bottled drinking water using Fourier transform infrared spectroscopy and multivariate analysis
    • doi: 10.1021/jf0609734
    • H. M. Al-Qadir, M. Al-Holy, M. Lin, N. I. Al-Alami, A. G. Cavinato and B. A. Rasco, "Rapid detection and identification of Pseudomonas aeruginosa and Escherichia coli as pure and mixed cultures in bottled drinking water using Fourier transform infrared spectroscopy and multivariate analysis", J. Agric. Food Chem. 54, 5749 (2006). doi: 10.1021/jf0609734
    • (2006) J. Agric. Food Chem. , vol.54 , pp. 5749
    • Al-Qadir, H.M.1    Al-Holy, M.2    Lin, M.3    Al-Alami, N.I.4    Cavinato, A.G.5    Rasco, B.A.6
  • 16
    • 23044451401 scopus 로고    scopus 로고
    • The use of Fourier transform infrared spectroscopy to differentiate Escherichia coli 0157:H7 from other bacteria inoculated into apple juice
    • doi: 10.1016/j.fm.2005.01.017
    • M. A. Al-Holy, M. Lin, A. G. Cavinato and B. A. Rasco, "The use of Fourier transform infrared spectroscopy to differentiate Escherichia coli 0157:H7 from other bacteria inoculated into apple juice", Food Microbiol. 23, 162 (2006). doi: 10.1016/j.fm.2005.01.017
    • (2006) Food Microbiol. , vol.23 , pp. 162
    • Al-Holy, M.A.1    Lin, M.2    Cavinato, A.G.3    Rasco, B.A.4
  • 17
    • 77955790565 scopus 로고    scopus 로고
    • Detection of E. coli 0157:H7 from ground beef using Fourier transform infrared (FT-IR) spectroscopy and chemometrics
    • doi: 10.1111/j.1750-3841.2010.01686.x
    • R. Davis, J. Irudayaraj, B. L. Reuhs and L. J. Mauer, "Detection of E. coli 0157:H7 from ground beef using Fourier transform infrared (FT-IR) spectroscopy and chemometrics", J. Food Sci. 75, M340 (2010). doi: 10.1111/j.1750-3841.2010.01686.x
    • (2010) J. Food Sci. , vol.75
    • Davis, R.1    Irudayaraj, J.2    Reuhs, B.L.3    Mauer, L.J.4
  • 18
    • 79957632533 scopus 로고    scopus 로고
    • Fourier transform infrared microspectroscopy as a bacterial source tracking tool to discriminate fecal E. coli strains
    • doi: 10.1016/j.microc.2011.03.002
    • C. Carlos, D. A. Maretto, R. J. Poppi, M. Inês, Z. Sato and L. M. M. Ottoboni, "Fourier transform infrared microspectroscopy as a bacterial source tracking tool to discriminate fecal E. coli strains", Microchem. J. 99, 15 (2011). doi: 10.1016/j.microc.2011.03.002
    • (2011) Microchem. J. , vol.99 , pp. 15
    • Carlos, C.1    Maretto, D.A.2    Poppi, R.J.3    Inês, M.4    Sato, Z.5    Ottoboni, L.M.M.6
  • 19
    • 79958101301 scopus 로고    scopus 로고
    • Rapid detection of Escherichia coli contamination in packaged fresh spinach using hyperspectral imaging
    • doi: 10.1016/j.talanta.2011.03.061
    • U. Siripatrawan, Y. Makino, Y. Kawagoe and S. Oshita, "Rapid detection of Escherichia coli contamination in packaged fresh spinach using hyperspectral imaging", Talanta 85, 276 (2011). doi: 10.1016/j.talanta. 2011.03.061
    • (2011) Talanta , vol.85 , pp. 276
    • Siripatrawan, U.1    Makino, Y.2    Kawagoe, Y.3    Oshita, S.4
  • 20
    • 18144378052 scopus 로고    scopus 로고
    • Bacterial identification by near-infrared chemical imaging of food-specific cards
    • doi: 10.1016/j.fm.2005.01.001
    • J. Duboisa, E. N. Lewis, F. S. Fry, Jr and E. M. Calvey, "Bacterial identification by near-infrared chemical imaging of food-specific cards", Food Microbiol. 22, 577 (2005). doi: 10.1016/j.fm.2005.01.001
    • (2005) Food Microbiol. , vol.22 , pp. 577
    • Duboisa, J.1    Lewis, E.N.2    Fry Jr., F.S.3    Calvey, E.M.4
  • 21
    • 52749083690 scopus 로고    scopus 로고
    • Differentiation of live-viable versus dead bacterial endospores by calibrated hyperspectral reflectance microscopy
    • doi: 10.1111/j.1365-2818.2008.02074.x
    • J. Anderson, C. Reynolds, D. Ringelberg, J. Edwards and K. Foley, "Differentiation of live-viable versus dead bacterial endospores by calibrated hyperspectral reflectance microscopy", J. Microscopy 232, 130 (2008). doi: 10.1111/j.1365-2818.2008.02074.x
    • (2008) J. Microscopy , vol.232 , pp. 130
    • Anderson, J.1    Reynolds, C.2    Ringelberg, D.3    Edwards, J.4    Foley, K.5
  • 22
    • 67049086120 scopus 로고    scopus 로고
    • Hyperspectral reflectacne imaging for detecting a foodborne pathogen: Campylobacter
    • S. C. Yoon, K. C. Lawrence, G. R. Siragusa, J. E. Line, B. Park and P. W. Feldner, "Hyperspectral reflectacne imaging for detecting a foodborne pathogen: Campylobacter", Trans. ASABE 52, 651 (2009).
    • (2009) Trans. ASABE , vol.52 , pp. 651
    • Yoon, S.C.1    Lawrence, K.C.2    Siragusa, G.R.3    Line, J.E.4    Park, B.5    Feldner, P.W.6
  • 24
    • 79960412221 scopus 로고    scopus 로고
    • The effect of region of interest size on model calibration for soil organic carbon prediction from hyperspectral images of prepared soils
    • doi: 10.1255/jnirs.930
    • S. M. O'Rourke, I. Argentati and N. M. Holden, "The effect of region of interest size on model calibration for soil organic carbon prediction from hyperspectral images of prepared soils", J. Near Infrared Spectrosc. 19, 161 (2011). doi: 10.1255/jnirs.930
    • (2011) J. Near Infrared Spectrosc. , vol.19 , pp. 161
    • O'Rourke, S.M.1    Argentati, I.2    Holden, N.M.3
  • 25
    • 0038269680 scopus 로고    scopus 로고
    • Calibration of a pushbroom hyperspectral imaging system for agricultural inspection
    • K. C. Lawrence, B. Park, W. R. Windham and C. Mao, "Calibration of a pushbroom hyperspectral imaging system for agricultural inspection", Trans. ASAE 46, 513 (2003). 558
    • (2003) Trans. ASAE , vol.46 , Issue.513 , pp. 558
    • Lawrence, K.C.1    Park, B.2    Windham, W.R.3    Mao, C.4
  • 26
    • 0042553279 scopus 로고
    • Smoothing and differentiation of data by simplified least squares procedures
    • doi: 10.1021/ac60214a047
    • A. Savitzky and M. J. E. Golay, "Smoothing and differentiation of data by simplified least squares procedures", Anal. Chem. 36, 1627 (1964). doi: 10.1021/ac60214a047
    • (1964) Anal. Chem. , vol.36 , pp. 1627
    • Savitzky, A.1    Golay, M.J.E.2
  • 27
    • 0024701578 scopus 로고
    • Standard normal variate transformation and detrending of near infrared diffuse reflectance spectroscopy
    • R. J. Barnes, M. S. Dhanoa and S. J. Lister, "Standard normal variate transformation and detrending of near infrared diffuse reflectance spectroscopy", Appl. Spectrosc. 43, 773 (1988).
    • (1988) Appl. Spectrosc. , vol.43 , pp. 773
    • Barnes, R.J.1    Dhanoa, M.S.2    Lister, S.J.3
  • 30
    • 79952393668 scopus 로고    scopus 로고
    • Visible-near infared hyperpsectral imaging for the identification and discrimination of brown blotch disease on mushroom (Agaricus bisporus) caps
    • doi: 10.1255/jnirs.894
    • E. Gaston, J. M. Frias, P. J. Cullen, C. P. O'Donnell and A. A. Gowen, "Visible-near infared hyperpsectral imaging for the identification and discrimination of brown blotch disease on mushroom (Agaricus bisporus) caps", J. Near Infrared Spectrosc. 18, 341-353 (2010). doi: 10.1255/jnirs.894
    • (2010) J. Near Infrared Spectrosc. , vol.18 , pp. 341-353
    • Gaston, E.1    Frias, J.M.2    Cullen, P.J.3    O'Donnell, C.P.4    Gowen, A.A.5
  • 32
    • 23044471733 scopus 로고    scopus 로고
    • Use of Fourier transform infrared spectra of crude bacterial lipopolysaccharides and chemometrics for differentiation of Salmonella enterica serotyeps
    • doi: 10.1111/j.1365-2672.2005.02621.x
    • S. Kim, B. L. Reuhs and L. J. Maure, "Use of Fourier transform infrared spectra of crude bacterial lipopolysaccharides and chemometrics for differentiation of Salmonella enterica serotyeps", J. Appl. Mircobiol. 99, 411 (2005). doi: 10.1111/j.1365-2672.2005.02621.x
    • (2005) J. Appl. Mircobiol. , vol.99 , pp. 411
    • Kim, S.1    Reuhs, B.L.2    Maure, L.J.3
  • 33
    • 0018846882 scopus 로고
    • Heterogeneity of antigenic side chain length in lipopolysaccharide from Escherichia coli 0111 and Salmonella Typhimurium LT2
    • doi: 10.1111/j.1432-1033.1980.tb04635.x
    • R. C. Goldman and L. Leive, "Heterogeneity of antigenic side chain length in lipopolysaccharide from Escherichia coli 0111 and Salmonella Typhimurium LT2", Eur. J. Biochem. 107, 145 (1980). doi: 10.1111/j.1432-1033.1980.tb04635.x
    • (1980) Eur. J. Biochem. , vol.107 , pp. 145
    • Goldman, R.C.1    Leive, L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.