Visible-near infrared hyperspectral imaging for the identification and discrimination of brown blotch disease on mushroom (Agaricus bisporus) caps

Journal of Near Infrared Spectroscopy

Volumn 18, Issue 5, 2010, Pages 341-353

  Gaston, Edurne ^a   Frías, Jesús M ^a   Cullen, Patrick J ^a   O'Donnell, Colm P ^b   Gowen, Aoife A ^b  

^a DUBLIN INSTITUTE OF TECHNOLOGY   (Ireland)

^b UNIVERSITY COLLEGE DUBLIN   (Ireland)

Author keywords

Agaricus bisporus; Brown blotch; Mechanical damage; Mushrooms; PLS DA; Pseudomonas tolaasii; Visible NIR hyperspectral imaging

Indexed keywords

BACTERIA; DAMAGE DETECTION; DECISION TREES; DISCRIMINANT ANALYSIS; FUNGI; INFRARED DEVICES; LEAST SQUARES APPROXIMATIONS; LOSSES; NONDESTRUCTIVE EXAMINATION; SPECTROSCOPY;

AGARICUS BISPORUS; BROWN BLOTCH; MECHANICAL DAMAGES; MUSHROOMS; PLS-DA; PSEUDOMONAS TOLAASII; VISIBLE-NIR;

HYPERSPECTRAL IMAGING;

EID: 79952393668     PISSN: 09670335     EISSN: None     Source Type: Journal    
DOI: 10.1255/jnirs.894     Document Type: Article

References (40)

1. S.G. Paine, "Studies in bactoeriosis II: A brown blotch disease of cultivated mushrooms", Ann. Appl. Biol. 5, 206 (1919).
2. N N.G. Nair and J.K. Bradley, "Mushroom blotch bacterium during cultivation", Mushroom J. 90, 201 (1980).
3. C C. Soler-Rivas, S. Jolivet, N. Arpin, J.M. Olivier and H.J. Wichers, "Biochemical and physiological aspects of brown blotch disease of Agaricus bisporus", FEMS Microbiol. Rev. 23, 591 (1999). doi: 10.1111/j.1574-6976. 1999.tb00415.x
4. P P.B. Rainey, C.L. Brodey and K. Johnstone, "Biology of Pseudomonas tolaasii, cause of brown blotch disease of the cultivated mushrooms", in Advances in Plant Pathology, Vol. 8, Ed by J.H. Andrews and I.C. Tommerup. Academic Press, Andover, UK, pp. 95-117 (1992).
5. F F. Moquet, M. Mamoun and J.M. Olivier, "Pseudomonas tolaasii and tolaasin: Comparison of symptom induction on a wide range of Agaricus bisporus strains", FEMS Microbiol. Lett. 142, 99 (1996).
6. J.C. Nutkins, R.J. Mortishire-Smith, L.C. Packman, C.L. Brodey, P.B. Rainey, K. Johnstone and D.H. Williams, "Structure determination of tolaasin, an extracellular lipodepsipeptide produced by mushroom pathogen Pseudomonas tolaasii Paine", J. Am. Chem. Soc. 113(7), 2621 (1991). doi: 10.1021/ja0007a040
7. J.M. Olivier, J. Guillaumes and D. Martin, "Study of a bacterial disease of mushroom caps", in 4th International Conference on Plant Pathogenic Bacteria, Angers, France, Ed by INRANRANRA, France, pp. 99-103 (1978).
8. P.H. Heinemann, R. Hughes, C.T. Morrow, H.J. Sommer, R.B. Beelman and P.J. Wuest, "Grading of mushrooms using a machine vision system", Trans. ASAE 37, 5 (1994).
9. T T. Vízhányó and J. Felföldi, "Enhancing colour differences in images of diseased mushrooms", Computers and Electronics in Agriculture 26(2), 187 (2000). doi: 10.1016/S0168-1699(00)00071-5 (Pubitemid 30181236)
10. S. Jolivet, N. Arpin, H.J. Wichers and G. Pellom, "Agaricus bisporus browning: A review", Mycol. Res. 102, 12 (1998). doi: 10.1017/ S0953756298006248 (Pubitemid 29014882)
11. A A.A. Gowen, C.P. O'Donnell, P.J. Cullen, G. Downey and J.M. Frias, "Hyperspectral imaging-an emerging process analytical tool for food quality and safety control", Trends Food Sci. Technol. 18(12), 590 (2007). doi: 10.1016/j.tifs.2007.06.001 (Pubitemid 350017801)
12. A A.A. Gowen, C.P. O'Donnell, M. Taghizadeh, P.J. Cullen, J.M. Frias and G. Downey, "Characterisation of blemishes on white mushroom (Agaricus bisporus) caps using hyperspectral imaging", in 10th International Conference on Engineering and Food - ICEF 10, Viña del Mar, Chile (2008).
13. Y Y. Peng and R. Lu, "Analysis of spatially resolved hyperspectral scattering images for assessing apple fruit firmness and soluble solids content", Postharvest Biol. Technol. 48, 1 (2008). doi: 10.1016/j.postharvbio. 2007.09.019
14. S.T. Monteiro, Y. Minekawa, Y. Kosugi, T. Akazawa and K. Oda, "Prediction of sweetness and amino acid content in soybean crops from hyperspectral imagery", ISPRS J. Photogrammetry Remote Sensing 62, 1 (2007). doi: 10.1016/j.isprsjprs.2006.12.002 (Pubitemid 46654758)
15. J. Qiao, N. Wang, M. Ngadi and S. Baljinder, "Water content and weight estimation for potatoes using hyperspectral imaging", in Proceedings of 2005 ASAE Annual Meeting, St Joseph, Michigan, USA. American Society of Agricultural and Biological Engineers, St Joseph. Michigan, USA, paper no. 053126 (2005).
16. L L. Liu, M.O. Ngadi, S.O. Prasher and C. Gariépy, "Categorization of pork quality using gabor filter-based hyperspectral imaging technology", J. Food Eng. 99, 3 (2010). doi: 10.1016/j.jfoodeng. 2010.03.001
17. H.K. Noh and R. Lu, "Hyperspectral laser-induced fluorescence imaging for assessing apple fruit quality", Postharvest Biol. Technol. 43, 2 (2007). doi: 10.1016/j.postharvbio.2006.09.006
18. B. Park, K.C. Lawrence, W.R. Windham and D.P. Smith, "Performance of hyperspectral imaging system for poultry surface fecal contaminant detection", J. Food Eng. 75, 3 (2006). doi: 10.1016/j.jfoodeng.2005.03.060 (Pubitemid 43277425)
19. Y Y. Liu, Y.-R. Chen, M.S. Kim, D.E. Chan and A.M. Lefcourt, "Development of simple algorithms for the detection of fecal contaminants on apples from visible/near infrared hyperspectral reflectance imaging", J. Food Eng. 81, 2 (2007). doi: 10.1016/j.jfoodeng.2006.11.018 (Pubitemid 46227652)
20. D D.P. Ariana and R. Lu, "Evaluation of internal defect and surface color of whole pickles using hyperspectralimaging", J. Food Eng. 96, 4 (2010). doi: 10.1016/j.jfoodeng.2009.09.005
21. J. Dubois, E.N. Lewis, J.F.S. Fry and E.M. Calvey, "Bacterial identification by near-infrared chemical imaging of food-specific cards", Food Microbiol. 22, 6 (2005). doi: 10.1016/j.fm.2005.01.001 (Pubitemid 40607739)
22. M.F. Escoriza, J.M. VanBriesen, S. Stewart, J. Maier and P.J. Treado, "Raman spectroscopy and chemical imaging for quantification of filtered waterborne bacteria", J. Microbiol. Methods 66, 1 (2006). doi: 10.1016/j.mimet.2005.10.013 (Pubitemid 43767532)
23. A A.A. Gowen, C.P. O'Donnell, M. Taghizadeh, P.J. Cullen and G. Downey, "Hyperspectral imaging combined with principal component analysis for bruise damage detection on white mushrooms (Agaricus bisporus)", J. Chemometr. 22, 3 (2008). doi: 10.1002/cem.1127
24. A A.A. Gowen, M. Taghizadeh and C.P. O'Donnell, "Identification of mushrooms subjected to freeze damage using hyperspectral imaging", J. Food Eng. 93, 1 (2009). doi: 10.1016/j.jfoodeng.2008.12.021
25. M. Taghizadeh, A. Gowen and C.P. O'Donnell, "Prediction of white button mushroom (Agaricus bisporus) moisture content using hyperspectral imaging", Sensing and Instrumentation for Food Quality and Safety 4, 219 (2009).
26. E E. Gaston, J.M. Frías, P.J. Cullen, C.P. O'Donnell and A.A. Gowen, "Prediction of polyphenol oxidase activity using visible near-infrared hyperspectral imaging on mushroom (Agaricus bisporus) caps", J. Agric. Food Chem. 58(1), 6226 (2010) doi: 10.1021/jf100501q
27. M. Taghizadeh, A. Gowen and C.P. O'Donnell, "Use of hyperspectral imaging for evaluation of the shelf-life of fresh white button mushrooms (Agaricus bisporus) stored in different packaging films", Innovative Food Science and Emerging Technologies 11(3), 423 (2010) doi: 10.1016/j.ifset.2010. 01.016
28. A A.A. Gowen, C.P. O'Donnell, M. Taghizadeh, E. Gaston, A. O'Gorman, P.J. Cullen, J.M. Frías, C. Esquerre and G. Downey, "Hyperspectral imaging for the investigation of quality deterioration in sliced mushrooms (Agaricus bisporus) during storage", Sensing and Instrumentation for Food Quality and Safety 2, 3 (2008). doi: 10.1007/s11694-008-9042-4
29. D D.P. Ariana, R. Lu and D.E. Guyer, "Near-infrared hyperspectral reflectance imaging for detection of bruises on pickling cucumbers", Computers and Electronics in Agriculture 53, 1 (2006). doi: 10.1016/j.compag. 2006.04.001
30. B.M. Nicolaï, E. Lötze, A. Peirs, N. Scheerlinck and K.I. Theron, "Non-destructive measurement of bitter pit in apple fruit using NIR hyperspectral imaging", Postharvest Biol. Technol. 40, 1 (2006). doi: 10.1016/j.postharvbio. 2005.12.006
31. G. El Masry, N. Wang and C. Vigneault, "Detecting chilling injury in red delicious apple using hyperspectral imaging and neural networks", Postharvest Biol. Technol. 52, 1 (2009). doi: 10.1016/j.postharvbio.2008.11.008
32. J. Gómez-Sanchis, L. Gómez-Chova, N. Aleixos, G. Camps-Valls, C. Montesinos-Herrero, E. Moltó and J. Blasco, "Hyperspectral system for early detection of rottenness caused by Penicillium digitatum in mandarins", J. Food Eng. 89(1), 80 (2008). doi: 10.1016.j.jfoodeng.2008.04.009
33. W.C. Wong and T.F. Preece, "Identification of Pseudomonas tolaasii: The white line in agar and mushroom tissue block rapid pitting tests", J. Appl. Bacteriol. 47, 401 (1979).
34. R R.J. Barnes, M.S. Dhanoa and S.J. Lister, "Standard normal variate transformation and detrending of near infrared diffuse reflectance spectroscopy", Appl. Spectros. 43, 5 (1989). doi: 10.1366/0003702894202201
35. C C. Esquerre, A.A. Gowen, C.P. O'Donnell and G. Downey, "Initial studies on the quantitation of bruise damage and freshness in mushrooms using visible-near-infrared spectroscopy", J. Agric. Food Chem. 57, 1903 (2009). doi: 10.1021/jf803090c
36. R R-Development-Core-Team, R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria (2007).
37. A A. Rocha, D.C. Hauagge, J. Wainer and S. Goldenstein, "Automatic fruit and vegetable classification from images", Computers and Electronics in Agriculture 70, 1 (2010). doi: 10.1016/j.compag.2009.09.002
38. P P. Geladi, D. MacDougall and H. Martens, "Linearization and scatter-correction for near-infrared reflectance spectra of meat", Appl. Spectros. 39, 3 (1985). doi: 10.1366/0003702854248656
39. T T. Azzouz, A. Puigdoménech, M. Aragay and R. Tauler, "Comparison between different data pre-treatment methods in the analysis of forage samples using near-infrared diffuse reflectance spectroscopy and partial least-squares multivariate calibration method", Anal. Chim. Acta 484(1), 121 (2003). doi: 10.1016/S0003-2670(03)00308-8 (Pubitemid 36555782)
40. J. Blasco, N. Aleixos and E. Moltó, "Machine vision system for automatic quality grading of fruit", Biosyst. Eng. 85, 4 (2003). doi: 10.1016/S1537-5110(03)00088-6 (Pubitemid 36996530)