-
1
-
-
33745256005
-
Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative
-
Anisimova M, Gascuel O. 2006. Approximate likelihood-ratio test for branches: a fast, accurate, and powerful alternative. Syst Biol. 55: 539-552.
-
(2006)
Syst Biol
, vol.55
, pp. 539-552
-
-
Anisimova, M.1
Gascuel, O.2
-
2
-
-
84863576090
-
The bilatarian sea urchin and the radial starlet sea anemone globins share strong homologies with vertebrate neuroglobins
-
Bolognesi M, di Prisco G, Verde C, editors New York: Springer
-
Bailly X, Vinogradov S. 2008. The bilatarian sea urchin and the radial starlet sea anemone globins share strong homologies with vertebrate neuroglobins. In: Bolognesi M, di Prisco G, Verde C, editors. Dioxygen binding and sensing proteins: a tribute to Beatrice and Jonathan Wittenberg. New York: Springer. p. 191-201.
-
(2008)
Dioxygen Binding and Sensing Proteins: A Tribute to Beatrice and Jonathan Wittenberg
, pp. 191-201
-
-
Bailly, X.1
Vinogradov, S.2
-
3
-
-
20144378666
-
Divergent distribution in vascular and avascular mammalian retinae links neuroglobin to cellular respiration
-
Bentmann A, Schmidt M, Reuss S, Wolfrum U, Hankeln T, Burmester T. 2005. Divergent distribution in vascular and avascular mammalian retinae links neuroglobin to cellular respiration. J Biol Chem. 280: 20660-20665.
-
(2005)
J Biol Chem
, vol.280
, pp. 20660-20665
-
-
Bentmann, A.1
Schmidt, M.2
Reuss, S.3
Wolfrum, U.4
Hankeln, T.5
Burmester, T.6
-
4
-
-
79960662890
-
Oxygen supply from the bird's eye perspective: Globin e is a respiratory protein in the chicken retina
-
Blank M, Kiger L, Thielebein A, Gerlach F, Hankeln T, Marden MC, Burmester T. 2011. Oxygen supply from the bird's eye perspective: globin E is a respiratory protein in the chicken retina. J Biol Chem. 286:26507-26515.
-
(2011)
J Biol Chem
, vol.286
, pp. 26507-26515
-
-
Blank, M.1
Kiger, L.2
Thielebein, A.3
Gerlach, F.4
Hankeln, T.5
Marden, M.C.6
Burmester, T.7
-
5
-
-
80052936277
-
A membrane-bound vertebrate globin
-
Blank M, Wollberg J, Gerlach F, Reimann K, Roesner A, Hankeln T, Fago A, Weber RE, Burmester T. 2011. A membrane-bound vertebrate globin. PLoS One 6:e25292.
-
(2011)
PLoS One
, vol.6
-
-
Blank, M.1
Wollberg, J.2
Gerlach, F.3
Reimann, K.4
Roesner, A.5
Hankeln, T.6
Fago, A.7
Weber, R.E.8
Burmester, T.9
-
6
-
-
2942564436
-
N-terminal myristoylation predictions by ensembles of neural networks
-
Bologna G, Yvon C, Duvaud S, Veuthey AL. 2004. N-terminal myristoylation predictions by ensembles of neural networks. Proteomics 4: 1626-1632.
-
(2004)
Proteomics
, vol.4
, pp. 1626-1632
-
-
Bologna, G.1
Yvon, C.2
Duvaud, S.3
Veuthey, A.L.4
-
7
-
-
0031406306
-
Nonvertebrate hemoglobins: Structural bases for reactivity
-
Bolognesi M, Bordo D, Rizzi M, Tarricone C, Ascenzi P. 1997. Nonvertebrate hemoglobins: structural bases for reactivity. Prog Biophys Mol Biol. 68:29-68.
-
(1997)
Prog Biophys Mol Biol
, vol.68
, pp. 29-68
-
-
Bolognesi, M.1
Bordo, D.2
Rizzi, M.3
Tarricone, C.4
Ascenzi, P.5
-
8
-
-
0038629108
-
Interaction with membrane lipids and heme ligand binding properties of Escherichia coli flavohemoglobin
-
Bonamore A, Farina A, Gattoni M, Schinina ME, Bellelli A, Boffi A. 2003. Interaction with membrane lipids and heme ligand binding properties of Escherichia coli flavohemoglobin. Biochemistry 42: 5792-5801.
-
(2003)
Biochemistry
, vol.42
, pp. 5792-5801
-
-
Bonamore, A.1
Farina, A.2
Gattoni, M.3
Schinina, M.E.4
Bellelli, A.5
Boffi, A.6
-
9
-
-
0036219963
-
Cytoglobin: A novel globin type ubiquitously expressed in vertebrate tissues
-
Burmester T, Ebner B, Weich B, Hankeln T. 2002. Cytoglobin: a novel globin type ubiquitously expressed in vertebrate tissues. Mol Biol Evol. 19:416-421.
-
(2002)
Mol Biol Evol
, vol.19
, pp. 416-421
-
-
Burmester, T.1
Ebner, B.2
Weich, B.3
Hankeln, T.4
-
10
-
-
17144392212
-
Neuroglobin and cytoglobin: Genes, proteins and evolution
-
Burmester T, Haberkamp M, Mitz SA, Roesner A, Schmidt M, Ebner B, Gerlach F, Fuchs C, Hankeln T. 2004. Neuroglobin and cytoglobin: genes, proteins and evolution. IUBMB Life 56:703-707.
-
(2004)
IUBMB Life
, vol.56
, pp. 703-707
-
-
Burmester, T.1
Haberkamp, M.2
Mitz, S.A.3
Roesner, A.4
Schmidt, M.5
Ebner, B.6
Gerlach, F.7
Fuchs, C.8
Hankeln, T.9
-
11
-
-
66149086544
-
What is the function of neuroglobin?
-
Burmester T, Hankeln T. 2009. What is the function of neuroglobin? J Exp Biol. 212:1423-1428.
-
(2009)
J Exp Biol
, vol.212
, pp. 1423-1428
-
-
Burmester, T.1
Hankeln, T.2
-
13
-
-
33745599891
-
Multiple sequence elements facilitate Chp Rho GTPase subcellular location, membrane association, and transforming activity
-
Chenette EJ, Mitin NY, Der CJ. 2006. Multiple sequence elements facilitate Chp Rho GTPase subcellular location, membrane association, and transforming activity. Mol Biol Cell. 17:3108-3121.
-
(2006)
Mol Biol Cell
, vol.17
, pp. 3108-3121
-
-
Chenette, E.J.1
Mitin, N.Y.2
Der, C.J.3
-
14
-
-
42949117860
-
Globin interactions with lipids and membranes
-
Di Giulio A, Bonamore A. 2008. Globin interactions with lipids and membranes. Methods Enzymol. 436:239-253.
-
(2008)
Methods Enzymol
, vol.436
, pp. 239-253
-
-
Di Giulio, A.1
Bonamore, A.2
-
16
-
-
80054065944
-
Phylogenetic analysis reveals wide distribution of globin X
-
Dröge J, Makalowski W. 2011. Phylogenetic analysis reveals wide distribution of globin X. Biol Direct. 6:54.
-
(2011)
Biol Direct
, vol.6
, pp. 54
-
-
Dröge, J.1
Makalowski, W.2
-
17
-
-
0042335879
-
Globin genes are present in Ciona intestinalis
-
Ebner B, Burmester T, Hankeln T. 2003. Globin genes are present in Ciona intestinalis. Mol Biol Evol. 20:1521-1525.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 1521-1525
-
-
Ebner, B.1
Burmester, T.2
Hankeln, T.3
-
18
-
-
78649480773
-
The globin gene family of the cephalochordate amphioxus: Implications for chordate globin evolution
-
Ebner B, Panopoulou G, Vinogradov SN, Kiger L,MardenMC, Burmester T, Hankeln T. 2010. The globin gene family of the cephalochordate amphioxus: implications for chordate globin evolution. BMC Evol Biol. 10:370.
-
(2010)
BMC Evol Biol
, vol.10
, pp. 370
-
-
Ebner, B.1
Panopoulou, G.2
Vinogradov, S.N.3
Kiger, L.4
Marden, M.C.5
Burmester, T.6
Hankeln, T.7
-
19
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
20
-
-
79952796717
-
A membranebound hemoglobin from gills of the green shore crab Carcinus maenas
-
Ertas B, Kiger L, Blank M,MardenMC, Burmester T. 2011. A membranebound hemoglobin from gills of the green shore crab Carcinus maenas. J Biol Chem. 286:3185-3193.
-
(2011)
J Biol Chem
, vol.286
, pp. 3185-3193
-
-
Ertas, B.1
Kiger, L.2
Blank, M.3
Marden, M.C.4
Burmester, T.5
-
21
-
-
0035920240
-
Hagfish hemoglobins: Structure, function, and oxygen-linked association
-
Fago A, Giangiacomo L, D'Avino R, Carratore V, Romano M, Boffi A, Chiancone E. 2001. Hagfish hemoglobins: structure, function, and oxygen-linked association. J Biol Chem. 276:27415-27423.
-
(2001)
J Biol Chem
, vol.276
, pp. 27415-27423
-
-
Fago, A.1
Giangiacomo, L.2
D'Avino, R.3
Carratore, V.4
Romano, M.5
Boffi, A.6
Chiancone, E.7
-
22
-
-
0035955697
-
The biology and enzymology of protein N-myristoylation
-
Farazi TA,Waksman G, Gordon JI. 2001. The biology and enzymology of protein N-myristoylation. J Biol Chem. 276:39501-39504.
-
(2001)
J Biol Chem
, vol.276
, pp. 39501-39504
-
-
Farazi, T.A.1
Waksman, G.2
Gordon, J.I.3
-
23
-
-
10444268100
-
Globin-coupled sensors, protoglobins, and the last universal common ancestor: Hemediatomic interactions, Part 1
-
Freitas TAK, Saito JA, Hou S, Alam M. 2005. Globin-coupled sensors, protoglobins, and the last universal common ancestor: hemediatomic interactions, Part 1. J Inorg Biochem. 99:23-33.
-
(2005)
J Inorg Biochem
, vol.99
, pp. 23-33
-
-
Freitas, T.A.K.1
Saito, J.A.2
Hou, S.3
Alam, M.4
-
24
-
-
32944462917
-
The amphibian globin gene repertoire as revealed by the Xenopus genome
-
Fuchs C, Burmester T, Hankeln T. 2006. The amphibian globin gene repertoire as revealed by the Xenopus genome. Cytogenet Genome Res. 112:296-306.
-
(2006)
Cytogenet Genome Res
, vol.112
, pp. 296-306
-
-
Fuchs, C.1
Burmester, T.2
Hankeln, T.3
-
26
-
-
77950806408
-
New algorithms and methods to estimate maximumlikelihood phylogenies: Assessing the performance of PhyML 3.0
-
Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O. 2010. New algorithms and methods to estimate maximumlikelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol. 59:307-321.
-
(2010)
Syst Biol
, vol.59
, pp. 307-321
-
-
Guindon, S.1
Dufayard, J.F.2
Lefort, V.3
Anisimova, M.4
Hordijk, W.5
Gascuel, O.6
-
27
-
-
10444267310
-
Neuroglobin and cytoglobin in search of their role in the vertebrate globin family
-
(23 co-authors)
-
Hankeln T, Ebner B, Fuchs C, et al. (23 co-authors). 2005. Neuroglobin and cytoglobin in search of their role in the vertebrate globin family. J Inorg Biochem. 99:110-119.
-
(2005)
J Inorg Biochem
, vol.99
, pp. 110-119
-
-
Hankeln, T.1
Ebner, B.2
Fuchs, C.3
-
28
-
-
0032052216
-
Hemoglobins from bacteria to man: Evolution of different patterns of gene expression
-
Hardison R. 1998. Hemoglobins from bacteria to man: evolution of different patterns of gene expression. J Exp Biol. 201:1099-1117.
-
(1998)
J Exp Biol
, vol.201
, pp. 1099-1117
-
-
Hardison, R.1
-
29
-
-
0029893918
-
A brief history of hemoglobins: Plant, animal, protist, and bacteria
-
Hardison RC. 1996. A brief history of hemoglobins: plant, animal, protist, and bacteria. Proc Natl Acad Sci USA. 93:5675-5679.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 5675-5679
-
-
Hardison, R.C.1
-
30
-
-
84862220580
-
Evolution of the globin gene family in deuterostomes: Lineage-specific patterns of diversification and attrition
-
Hoffmann FG, Opazo JC, Hoogewijs D, Hankeln T, Ebner B, Vinogradov SN, Bailly X, Storz JF. 2012. Evolution of the globin gene family in deuterostomes: lineage-specific patterns of diversification and attrition. Mol Biol Evol. 29:1735-1745.
-
(2012)
Mol Biol Evol
, vol.29
, pp. 1735-1745
-
-
Hoffmann, F.G.1
Opazo, J.C.2
Hoogewijs, D.3
Hankeln, T.4
Ebner, B.5
Vinogradov, S.N.6
Bailly, X.7
Storz, J.F.8
-
31
-
-
77956272960
-
Gene cooption and convergent evolution of oxygen transport hemoglobins in jawed and jawless vertebrates
-
Hoffmann FG, Opazo JC, Storz JF. 2010. Gene cooption and convergent evolution of oxygen transport hemoglobins in jawed and jawless vertebrates. Proc Natl Acad Sci USA. 107: 14274-14279.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 14274-14279
-
-
Hoffmann, F.G.1
Opazo, J.C.2
Storz, J.F.3
-
32
-
-
84856397079
-
Differential loss and retention of cytoglobin, myoglobin, and globin-E during the radiation of vertebrates
-
Hoffmann FG, Opazo JC, Storz JF. 2011. Differential loss and retention of cytoglobin, myoglobin, and globin-E during the radiation of vertebrates. Genome Biol Evol. 3:588-600.
-
(2011)
Genome Biol Evol
, vol.3
, pp. 588-600
-
-
Hoffmann, F.G.1
Opazo, J.C.2
Storz, J.F.3
-
33
-
-
84861376715
-
Whole-genome duplications spurred the functional diversification of the globin gene superfamily in vertebrates
-
Hoffmann FG, Opazo JC, Storz JF. 2012. Whole-genome duplications spurred the functional diversification of the globin gene superfamily in vertebrates. Mol Biol Evol. 29:303-312.
-
(2012)
Mol Biol Evol
, vol.29
, pp. 303-312
-
-
Hoffmann, F.G.1
Opazo, J.C.2
Storz, J.F.3
-
34
-
-
84857613938
-
Androglobin: A chimeric globin in metazoans that is preferentially expressed in mammalian testes
-
Hoogewijs D, Ebner D, Dewilde S, Moens L, Fabrizius A, Burmester T, Hoffmann FG, Storz JF, Vinogradov SN, Hankeln T. 2012. Androglobin: a chimeric globin in metazoans that is preferentially expressed in mammalian testes. Mol Biol Evol. 29:1105-1114.
-
(2012)
Mol Biol Evol
, vol.29
, pp. 1105-1114
-
-
Hoogewijs, D.1
Ebner, D.2
Dewilde, S.3
Moens, L.4
Fabrizius, A.5
Burmester, T.6
Hoffmann, F.G.7
Storz, J.F.8
Vinogradov, S.N.9
Hankeln, T.10
-
35
-
-
0035979209
-
Globin-coupled sensors: A class of heme-containing sensors in Archaea and Bacteria
-
Hou S, Freitas TA, Larsen RW, PiatibratovM, Sivozhelezov V, Yamamoto A, Meleshkevitch EA, Zimmer M, Ordal GW, Alam M. 2001. Globin-coupled sensors: a class of heme-containing sensors in Archaea and Bacteria. Proc Natl Acad Sci USA. 98:9353-9358.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 9353-9358
-
-
Hou, S.1
Freitas, T.A.2
Larsen, R.W.3
Piatibratov, M.4
Sivozhelezov, V.5
Yamamoto, A.6
Meleshkevitch, E.A.7
Zimmer, M.8
Ordal, G.W.9
Alam, M.10
-
36
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
37
-
-
82555187208
-
Neuroglobin-deficiency exacerbates Hif1A and c-FOS response, but does not affect neuronal survival during severe hypoxia in vivo
-
Hundahl CA, Luuk H, Ilmjarv S, Falktoft B, Raida Z, Vikesaa J, Friis-Hansen L, Hay-Schmidt A. 2011. Neuroglobin-deficiency exacerbates Hif1A and c-FOS response, but does not affect neuronal survival during severe hypoxia in vivo. PLoS One 6:e28160.
-
(2011)
PLoS One
, vol.6
-
-
Hundahl, C.A.1
Luuk, H.2
Ilmjarv, S.3
Falktoft, B.4
Raida, Z.5
Vikesaa, J.6
Friis-Hansen, L.7
Hay-Schmidt, A.8
-
38
-
-
0026691182
-
The rapid generation of mutation data matrices from protein sequences
-
Jones DT, Taylor WR, Thornton JM. 1992. The rapid generation of mutation data matrices from protein sequences. Comput Appl Biosci. 8: 275-282.
-
(1992)
Comput Appl Biosci
, vol.8
, pp. 275-282
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
39
-
-
13744252890
-
MAFFT version 5: Improvement in accuracy of multiple sequence alignment
-
Katoh K, Kuma K, Toh H, Miyata T. 2005. MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res. 33:511-518.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 511-518
-
-
Katoh, K.1
Kuma, K.2
Toh, H.3
Miyata, T.4
-
40
-
-
0036304164
-
Cyclostome hemoglobins are possibly paralogous to gnathostome hemoglobins
-
Katoh K, Miyata T. 2002. Cyclostome hemoglobins are possibly paralogous to gnathostome hemoglobins. J Mol Evol. 55: 246-249.
-
(2002)
J Mol Evol
, vol.55
, pp. 246-249
-
-
Katoh, K.1
Miyata, T.2
-
41
-
-
0035816696
-
Characterization of a stellate cell activationassociated protein (STAP) with peroxidase activity found in rat hepatic stellate cells
-
Kawada N, Kristensen DB, Asahina K, Nakatani K,Minamiyama Y, Seki S, Yoshizato K. 2001. Characterization of a stellate cell activationassociated protein (STAP) with peroxidase activity found in rat hepatic stellate cells. J Biol Chem. 276:25318-25323.
-
(2001)
J Biol Chem
, vol.276
, pp. 25318-25323
-
-
Kawada, N.1
Kristensen, D.B.2
Asahina, K.3
Nakatani, K.4
Minamiyama, Y.5
Seki, S.6
Yoshizato, K.7
-
42
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
(13 co-authors)
-
Larkin MA, Blackshields G, Brown NP, et al. (13 co-authors). 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
-
43
-
-
31144442881
-
Automatic assessment of alignment quality
-
Lassmann T, Sonnhammer EL. 2005. Automatic assessment of alignment quality. Nucleic Acids Res. 33:7120-7128.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 7120-7128
-
-
Lassmann, T.1
Sonnhammer, E.L.2
-
44
-
-
45849154166
-
An improved general amino acid replacement matrix
-
Le SQ, Gascuel O. 2008. An improved general amino acid replacement matrix. Mol Biol Evol. 25:1307-1320.
-
(2008)
Mol Biol Evol
, vol.25
, pp. 1307-1320
-
-
Le, S.Q.1
Gascuel, O.2
-
45
-
-
33845794047
-
Palmitoylation: Policing protein stability and traffic
-
Linder ME, Deschenes RJ. 2007. Palmitoylation: policing protein stability and traffic. Nat Rev Mol Cell Biol. 8:74-84.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 74-84
-
-
Linder, M.E.1
Deschenes, R.J.2
-
46
-
-
1642327485
-
Truncated hemoglobin o of Mycobacterium tuberculosis: The oligomeric state change and the interaction with membrane components
-
Liu C, He Y, Chang Z. 2004. Truncated hemoglobin o of Mycobacterium tuberculosis: the oligomeric state change and the interaction with membrane components. Biochem Biophys Res Commun. 316: 1163-1172.
-
(2004)
Biochem Biophys Res Commun
, vol.316
, pp. 1163-1172
-
-
Liu, C.1
He, Y.2
Chang, Z.3
-
47
-
-
78651285748
-
CDD: A conserved domain database for the functional annotation of proteins
-
(27 co-authors)
-
Marchler-Bauer A, Lu S, Anderson JB, et al. (27 co-authors). 2011. CDD: a conserved domain database for the functional annotation of proteins. Nucleic Acids Res. 39:D225-D229.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Marchler-Bauer, A.1
Lu, S.2
Anderson, J.B.3
-
48
-
-
0036290648
-
N-terminal N-myristoylation of proteins: Prediction of substrate proteins from amino acid sequence
-
Maurer-Stroh S, Eisenhaber B, Eisenhaber F. 2002. N-terminal N-myristoylation of proteins: prediction of substrate proteins from amino acid sequence. J Mol Biol. 317:541-557.
-
(2002)
J Mol Biol
, vol.317
, pp. 541-557
-
-
Maurer-Stroh, S.1
Eisenhaber, B.2
Eisenhaber, F.3
-
50
-
-
69249208538
-
When the brain goes diving: Glial oxidative metabolism may confer hypoxia tolerance to the seal brain
-
Mitz SA, Reuss S, Folkow LP, Blix AS, Ramirez JM, Hankeln T, Burmester T. 2009. When the brain goes diving: glial oxidative metabolism may confer hypoxia tolerance to the seal brain. Neuroscience 163: 552-560.
-
(2009)
Neuroscience
, vol.163
, pp. 552-560
-
-
Mitz, S.A.1
Reuss, S.2
Folkow, L.P.3
Blix, A.S.4
Ramirez, J.M.5
Hankeln, T.6
Burmester, T.7
-
51
-
-
0031571632
-
Electrostatic interaction of myristoylated proteins with membranes: Simple physics, complicated biology
-
Murray D, Ben-Tal N, Honig B, McLaughlin S. 1997. Electrostatic interaction of myristoylated proteins with membranes: simple physics, complicated biology. Structure 5:985-989.
-
(1997)
Structure
, vol.5
, pp. 985-989
-
-
Murray, D.1
Ben-Tal, N.2
Honig, B.3
McLaughlin, S.4
-
52
-
-
34848907786
-
Protein lipidation
-
Nadolski MJ, Linder ME. 2007. Protein lipidation. FEBS J. 274: 5202-5210.
-
(2007)
FEBS J
, vol.274
, pp. 5202-5210
-
-
Nadolski, M.J.1
Linder, M.E.2
-
53
-
-
85047691361
-
Cytoglobin/STAP, its unique localization in splanchnic fibroblast-like cells and function in organ fibrogenesis
-
Nakatani K, Okuyama H, Shimahara Y, Saeki S, Kim DH, Nakajima Y, Seki S, Kawada N, Yoshizato K. 2004. Cytoglobin/STAP, its unique localization in splanchnic fibroblast-like cells and function in organ fibrogenesis. Lab Invest. 84:91-101.
-
(2004)
Lab Invest
, vol.84
, pp. 91-101
-
-
Nakatani, K.1
Okuyama, H.2
Shimahara, Y.3
Saeki, S.4
Kim, D.H.5
Nakajima, Y.6
Seki, S.7
Kawada, N.8
Yoshizato, K.9
-
54
-
-
0034623005
-
T-coffee: A novel method for fast and accurate multiple sequence alignment
-
Notredame C, Higgins DG, Heringa J. 2000. T-coffee: a novel method for fast and accurate multiple sequence alignment. J Mol Biol. 302: 205-217.
-
(2000)
J Mol Biol
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
55
-
-
42449090264
-
PROMALS3D: A tool for multiple protein sequence and structure alignments
-
Pei J, Kim BH, Grishin NV. 2008. PROMALS3D: a tool for multiple protein sequence and structure alignments. Nucleic Acids Res. 36: 2295-2300.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 2295-2300
-
-
Pei, J.1
Kim, B.H.2
Grishin, N.V.3
-
56
-
-
0018654083
-
Regulation of oxygen affinity of hemoglobin: Influence of structure of the globin on the heme iron
-
Perutz MF. 1979. Regulation of oxygen affinity of hemoglobin: influence of structure of the globin on the heme iron. Annu Rev Biochem. 48: 327-386.
-
(1979)
Annu Rev Biochem
, vol.48
, pp. 327-386
-
-
Perutz, M.F.1
-
57
-
-
0012231458
-
Neuroglobin and cytoglobin. Fresh blood for the vertebrate globin family
-
Pesce A, Bolognesi M, Bocedi A, Ascenzi P, Dewilde S, Moens L, Hankeln T, Burmester T. 2002. Neuroglobin and cytoglobin. Fresh blood for the vertebrate globin family. EMBO Rep. 3:1146-1151.
-
(2002)
EMBO Rep
, vol.3
, pp. 1146-1151
-
-
Pesce, A.1
Bolognesi, M.2
Bocedi, A.3
Ascenzi, P.4
Dewilde, S.5
Moens, L.6
Hankeln, T.7
Burmester, T.8
-
58
-
-
0035816664
-
Vitreoscilla hemoglobin. Intracellular localization and binding to membranes
-
Ramandeep KWH, Raje M, Kim K-J, Stark BC, Dikshit KL, Webster DA. 2001. Vitreoscilla hemoglobin. Intracellular localization and binding to membranes. J Biol Chem. 276:24781-24789.
-
(2001)
J Biol Chem
, vol.276
, pp. 24781-24789
-
-
Ramandeep, K.W.H.1
Raje, M.2
Kim, K.-J.3
Stark, B.C.4
Dikshit, K.L.5
Webster, D.A.6
-
59
-
-
79952144810
-
Lipid binding to cytoglobin leads to a change in heme coordination: A role for cytoglobin in lipid signalling of oxidative stress
-
Reeder BJ, Svistunenko D, Wilson M. 2011. Lipid binding to cytoglobin leads to a change in heme coordination: a role for cytoglobin in lipid signalling of oxidative stress. Biochem J. 43:483-492.
-
(2011)
Biochem J
, vol.43
, pp. 483-492
-
-
Reeder, B.J.1
Svistunenko, D.2
Wilson, M.3
-
60
-
-
54249148026
-
CSS-Palm 2.0: An updated software for palmitoylation sites prediction
-
Ren J,Wen L, Gao X, Jin C, Xue Y, Yao X. 2008. CSS-Palm 2.0: an updated software for palmitoylation sites prediction. Protein Eng Des Sel. 21: 639-644.
-
(2008)
Protein Eng des Sel
, vol.21
, pp. 639-644
-
-
Ren, J.1
Wen, L.2
Gao, X.3
Jin, C.4
Xue, Y.5
Yao, X.6
-
61
-
-
0032875098
-
Fatty acylation of proteins: New insights into membrane targeting of myristoylated and palmitoylated proteins
-
Resh MD. 1999. Fatty acylation of proteins: new insights into membrane targeting of myristoylated and palmitoylated proteins. Biochim Biophy Acta. 1451:1-16.
-
(1999)
Biochim Biophy Acta
, vol.1451
, pp. 1-16
-
-
Resh, M.D.1
-
62
-
-
33645541767
-
Interaction of Vitreoscilla hemoglobin with membrane lipids
-
Rinaldi AC, Bonamore A, Macone A, Boffi A, Bozzi A, Di Giulio A. 2006. Interaction of Vitreoscilla hemoglobin with membrane lipids. Biochemistry 45:4069-4076.
-
(2006)
Biochemistry
, vol.45
, pp. 4069-4076
-
-
Rinaldi, A.C.1
Bonamore, A.2
MacOne, A.3
Boffi, A.4
Bozzi, A.5
Di Giulio, A.6
-
63
-
-
10344243985
-
A globin gene of ancient evolutionary origin in lower vertebrates: Evidence for two distinct globin families in animals
-
Roesner A, Fuchs C, Hankeln T, Burmester T. 2005. A globin gene of ancient evolutionary origin in lower vertebrates: evidence for two distinct globin families in animals. Mol Biol Evol. 22:12-20.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 12-20
-
-
Roesner, A.1
Fuchs, C.2
Hankeln, T.3
Burmester, T.4
-
64
-
-
10744220623
-
Cytoglobin is a respiratory protein in connective tissue and neurons, which is up-regulated by hypoxia
-
(11 co-authors)
-
Schmidt M, Gerlach F, Avivi A, et al. (11 co-authors). 2004. Cytoglobin is a respiratory protein in connective tissue and neurons, which is up-regulated by hypoxia. J Biol Chem. 279:8063-8069.
-
(2004)
J Biol Chem
, vol.279
, pp. 8063-8069
-
-
Schmidt, M.1
Gerlach, F.2
Avivi, A.3
-
65
-
-
79958043184
-
Phylogenetic diversification of the globin gene superfamily in chordates
-
Storz JF, Opazo JC, Hoffmann FG. 2011. Phylogenetic diversification of the globin gene superfamily in chordates. IUBMB Life 63:313-322.
-
(2011)
IUBMB Life
, vol.63
, pp. 313-322
-
-
Storz, J.F.1
Opazo, J.C.2
Hoffmann, F.G.3
-
66
-
-
0037205447
-
A ubiquitously expressed human hexacoordinate hemoglobin
-
Trent JT, Hargrove MS. 2002. A ubiquitously expressed human hexacoordinate hemoglobin. J Biol Chem. 277:19538-19545.
-
(2002)
J Biol Chem
, vol.277
, pp. 19538-19545
-
-
Trent, J.T.1
Hargrove, M.S.2
-
67
-
-
0035066385
-
Nonvertebrate hemoglobins: Functions and molecular adaptations
-
Weber RE, Vinogradov SN. 2001. Nonvertebrate hemoglobins: functions and molecular adaptations. Physiol Rev. 81:569-628.
-
(2001)
Physiol Rev
, vol.81
, pp. 569-628
-
-
Weber, R.E.1
Vinogradov, S.N.2
-
68
-
-
0035031966
-
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
-
Whelan S, Goldman N. 2001. A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. Mol Biol Evol. 18:691-699.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 691-699
-
-
Whelan, S.1
Goldman, N.2
|