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Volumn 6, Issue 10, 2012, Pages 1858-1868

Increased rectal microbial richness is associated with the presence of colorectal adenomas in humans

Author keywords

BMI; Colon cancer; Commensal bacteria; Diagnostic

Indexed keywords

BACTERIAL DNA; RNA 16S;

EID: 84867745572     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2012.43     Document Type: Article
Times cited : (176)

References (52)
  • 3
    • 77953916879 scopus 로고
    • A Practical and Powerful Approach to Multiple Testing
    • BenJ Amini Y, Hochberg Y. (1995). A Practical and Powerful Approach to Multiple Testing. J Roy Stat Soc B 57: 12.
    • (1995) J Roy Stat Soc B , vol.57 , pp. 12
    • Benj Amini, Y.1    Hochberg, Y.2
  • 4
    • 0035989637 scopus 로고    scopus 로고
    • Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family
    • Bernardet JF, Nakagawa Y, Holmes B. (2002). Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int JSyst Evol Microbiol 52: 1049-1070.
    • (2002) Int JSyst Evol Microbiol , vol.52 , pp. 1049-1070
    • Bernardet, J.F.1    Nakagawa, Y.2    Holmes, B.3
  • 5
    • 0033983116 scopus 로고    scopus 로고
    • Diet and colorectal cancer preven-tion
    • Bingham SA. (2000). Diet and colorectal cancer preven-tion. Biochem Soc Trans 28: 12-16.
    • (2000) Biochem Soc Trans , vol.28 , pp. 12-16
    • Bingham, S.A.1
  • 6
    • 69149096832 scopus 로고    scopus 로고
    • The gut microbiota ecology: A new opportunity for the treatment of metabolic diseases?
    • Burcelin R, Luche E, Serino M, Amar J. (2009). The gut microbiota ecology: a new opportunity for the treatment of metabolic diseases? Front Biosci 14: 5107-5117.
    • (2009) Front Biosci , vol.14 , pp. 5107-5117
    • Burcelin, R.1    Luche, E.2    Serino, M.3    Amar, J.4
  • 7
    • 55849096955 scopus 로고    scopus 로고
    • Infectious agents and colorectal cancer: A review of Helicobacter pylori, Streptococcus bovis, JC virus, and human papillomavirus
    • Burnett-Hartman AN, Newcomb PA, Potter JD. (2008). Infectious agents and colorectal cancer: a review of Helicobacter pylori, Streptococcus bovis, JC virus, and human papillomavirus. Cancer Epidemiol Biomarkers Prev 17: 2970-2979.
    • (2008) Cancer Epidemiol Biomarkers Prev , vol.17 , pp. 2970-2979
    • Burnett-Hartman, A.N.1    Newcomb, P.A.2    Potter, J.D.3
  • 8
    • 70449574399 scopus 로고    scopus 로고
    • Interplay between obesity and associated metabolic disorders: New insights into the gut microbiota
    • Cani PD, Delzenne NM. (2009). Interplay between obesity and associated metabolic disorders: new insights into the gut microbiota. Curr Opin Pharmacol 9: 737-743.
    • (2009) Curr Opin Pharmacol , vol.9 , pp. 737-743
    • Cani, P.D.1    Delzenne, N.M.2
  • 10
    • 0030751239 scopus 로고    scopus 로고
    • Helicobacter pylori survival in gastric mucosa by generation of a p H gradient
    • Chen G, Fournier RL, Varanasi S, Mahama-Relue PA. (1997). Helicobacter pylori survival in gastric mucosa by generation of a p H gradient. Biophys J 73: 1081-1088.
    • (1997) Biophys J , vol.73 , pp. 1081-1088
    • Chen, G.1    Fournier, R.L.2    Varanasi, S.3    Mahama-Relue, P.A.4
  • 11
    • 0036137277 scopus 로고    scopus 로고
    • DNA sequence quality trimming and vector removal
    • Chou HH, Holmes MH. (2001). DNA sequence quality trimming and vector removal. Bioinformatics 17: 1093-1104.
    • (2001) Bioinformatics , vol.17 , pp. 1093-1104
    • Chou, H.H.1    Holmes, M.H.2
  • 12
  • 13
    • 8144224956 scopus 로고    scopus 로고
    • Lactate-utilizing bacteria, isolated from human feces, that produce butyrate as a major fermentation product
    • Duncan SH, Louis P, Flint HJ. (2004). Lactate-utilizing bacteria, isolated from human feces, that produce butyrate as a major fermentation product. Appl Environ Microbiol 70: 5810-5817.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 5810-5817
    • Duncan, S.H.1    Louis, P.2    Flint, H.J.3
  • 15
    • 0029013322 scopus 로고
    • Dietary modulation of the human colonic microbiota: Introducing the con-cept of prebiotics
    • Gibson GR, Roberfroid MB. (1995). Dietary modulation of the human colonic microbiota: introducing the con-cept of prebiotics. J Nutr 125: 1401-1412.
    • (1995) J Nutr , vol.125 , pp. 1401-1412
    • Gibson, G.R.1    Roberfroid, M.B.2
  • 18
    • 79952006773 scopus 로고    scopus 로고
    • Chimeric 16S r RNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
    • Haas BJ, Gevers D, Earl AM, Feldgarden M, Ward DV, Giannoukos G et al. (2011). Chimeric 16S r RNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons. Genome Res 21: 494-504.
    • (2011) Genome Res , vol.21 , pp. 494-504
    • Haas, B.J.1    Gevers, D.2    Earl, A.M.3    Feldgarden, M.4    Ward, D.V.5    Giannoukos, G.6
  • 19
  • 20
    • 3042712911 scopus 로고    scopus 로고
    • Commensal bacteria, redox stress, and colorectal cancer: Mechanisms and models
    • Huycke MM, Gaskins HR. (2004). Commensal bacteria, redox stress, and colorectal cancer: mechanisms and models. Exp Biol Med (Maywood) 229: 586-597.
    • (2004) Exp Biol Med (Maywood) , vol.229 , pp. 586-597
    • Huycke, M.M.1    Gaskins, H.R.2
  • 23
    • 84863022950 scopus 로고    scopus 로고
    • Genomic analysis identifies association of Fusobacterium with colorectal carci-noma
    • Kostic AD, Gevers D, Pedamallu CS, Michaud M, Duke F, Earl AM et al. (2012). Genomic analysis identifies association of Fusobacterium with colorectal carci-noma. Genome Res 22: 292-298.
    • (2012) Genome Res , vol.22 , pp. 292-298
    • Kostic, A.D.1    Gevers, D.2    Pedamallu, C.S.3    Michaud, M.4    Duke, F.5    Earl, A.M.6
  • 24
    • 73349110099 scopus 로고    scopus 로고
    • Wrinkles in the rare biosphere: Pyrosequen-cing errors can lead to artificial inflation of diversity estimates
    • Kunin V, Engelbrektson A, Ochman H, Hugenholtz P. (2010). Wrinkles in the rare biosphere: pyrosequen-cing errors can lead to artificial inflation of diversity estimates. Environ Microbiol 12: 118-123.
    • (2010) Environ Microbiol , vol.12 , pp. 118-123
    • Kunin, V.1    Engelbrektson, A.2    Ochman, H.3    Hugenholtz, P.4
  • 25
    • 0031217307 scopus 로고    scopus 로고
    • Recent developments in colorectal cancer
    • Lance P. (1997). Recent developments in colorectal cancer. J R Coll Physicians Lond 31: 483-487.
    • (1997) J R Coll Physicians Lond , vol.31 , pp. 483-487
    • Lance, P.1
  • 29
    • 33845901507 scopus 로고    scopus 로고
    • Microbial ecology: Human gut microbes associated with obesity
    • Ley RE, Turnbaugh PJ, Klein S, Gordon JI. (2006). Microbial ecology: human gut microbes associated with obesity. Nature 444: 1022-1023.
    • (2006) Nature , vol.444 , pp. 1022-1023
    • Ley, R.E.1    Turnbaugh, P.J.2    Klein, S.3    Gordon, J.I.4
  • 30
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak KJ, Schmittgen TD. (2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 25: 402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 31
    • 70349641145 scopus 로고    scopus 로고
    • Implanted-port-catheter-related sepsis caused by Acidovorax avenae and methicillin-sensitive Staphy-lococcus aureus
    • Malkan AD, Strollo W, Scholand SJ, Dudrick SJ. (2009). Implanted-port-catheter-related sepsis caused by Acidovorax avenae and methicillin-sensitive Staphy-lococcus aureus. J Clin Microbiol 47: 3358-3361.
    • (2009) J Clin Microbiol , vol.47 , pp. 3358-3361
    • Malkan, A.D.1    Strollo, W.2    Scholand, S.J.3    Dudrick, S.J.4
  • 34
    • 0029084396 scopus 로고
    • Intestinal floras of popula-tions that have a high risk of colon cancer
    • Moore WE, Moore LH. (1995). Intestinal floras of popula-tions that have a high risk of colon cancer. Appl Environ Microbiol 61: 3202-3207.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 3202-3207
    • Moore, W.E.1    Moore, L.H.2
  • 36
    • 13844307904 scopus 로고    scopus 로고
    • Animal models of intestinal inflammation: Clues to the pathogenesis of inflamma-tory bowel disease
    • discussion 174-168 211-168
    • Powrie F, Uhlig H. (2004). Animal models of intestinal inflammation: clues to the pathogenesis of inflamma-tory bowel disease. Novartis Found Symp 263: 164-174. discussion 174-168, 211-168.
    • (2004) Novartis Found Symp , vol.263 , pp. 164-174
    • Powrie, F.1    Uhlig, H.2
  • 37
    • 33749159671 scopus 로고    scopus 로고
    • Role of the innate immune system and host-commensal mutualism
    • Rakoff-Nahoum S, Medzhitov R. (2006). Role of the innate immune system and host-commensal mutualism. Curr Top Microbiol Immunol 308: 1-18.
    • (2006) Curr Top Microbiol Immunol , vol.308 , pp. 1-18
    • Rakoff-Nahoum, S.1    Medzhitov, R.2
  • 38
    • 3242664636 scopus 로고    scopus 로고
    • Recognition of commensal microflora by toll-like receptors is required for intestinal homeostasis
    • Rakoff-Nahoum S, Paglino J, Eslami-Varzaneh F, Edberg S, Medzhitov R. (2004). Recognition of commensal microflora by toll-like receptors is required for intestinal homeostasis. Cell 118: 229-241.
    • (2004) Cell , vol.118 , pp. 229-241
    • Rakoff-Nahoum, S.1    Paglino, J.2    Eslami-Varzaneh, F.3    Edberg, S.4    Medzhitov, R.5
  • 39
    • 0017341656 scopus 로고
    • Microbial ecology of the gastrointest-inal tract
    • Savage DC (1977). Microbial ecology of the gastrointest-inal tract. Annu Rev Microbiol 31: 107-133.
    • (1977) Annu Rev Microbiol , vol.31 , pp. 107-133
    • Savage, D.C.1
  • 41
    • 77954821323 scopus 로고    scopus 로고
    • Molecular characterization of mucosal adherent bacteria and associations with colorectal adenomas
    • Shen XJ, Rawls JF, Randall T, Burcal L, Mpande CN, Jenkins N et al. (2010). Molecular characterization of mucosal adherent bacteria and associations with colorectal adenomas. Gut Microbes 1: 138-147.
    • (2010) Gut Microbes , vol.1 , pp. 138-147
    • Shen, X.J.1    Rawls, J.F.2    Randall, T.3    Burcal, L.4    Mpande, C.N.5    Jenkins, N.6
  • 43
    • 45149087438 scopus 로고    scopus 로고
    • Expression of a bacterial flagellin gene triggers plant immune responses and confers disease resistance in transgenic rice plants
    • Takakura Y, Che FS, Ishida Y, Tsutsumi F, Kurotani K, Usami S et al. (2008). Expression of a bacterial flagellin gene triggers plant immune responses and confers disease resistance in transgenic rice plants. Mol Plant Pathol 9: 525-529.
    • (2008) Mol Plant Pathol , vol.9 , pp. 525-529
    • Takakura, Y.1    Che, F.S.2    Ishida, Y.3    Tsutsumi, F.4    Kurotani, K.5    Usami, S.6
  • 44
    • 0037406659 scopus 로고    scopus 로고
    • Flagellin from an incompatible strain of Acidovorax avenae mediates H2O2 generation accompanying hypersensitive cell death and expres-sion of PAL, Cht-1, and PBZ1, but not of Lox in rice
    • Tanaka N, Che FS, Watanabe N, Fujiwara S, Takayama S, Isogai A. (2003). Flagellin from an incompatible strain of Acidovorax avenae mediates H2O2 generation accompanying hypersensitive cell death and expres-sion of PAL, Cht-1, and PBZ1, but not of Lox in rice. Mol Plant Microbe Interact 16: 422-428.
    • (2003) Mol Plant Microbe Interact , vol.16 , pp. 422-428
    • Tanaka, N.1    Che, F.S.2    Watanabe, N.3    Fujiwara, S.4    Takayama, S.5    Isogai, A.6
  • 46
    • 69949111703 scopus 로고    scopus 로고
    • The core gut micro-biome, energy balance and obesity
    • Turnbaugh PJ, Gordon JI. (2009). The core gut micro-biome, energy balance and obesity. J Physiol 587: 4153-4158.
    • (2009) J Physiol , vol.587 , pp. 4153-4158
    • Turnbaugh, P.J.1    Gordon, J.I.2
  • 49
    • 34548293679 scopus 로고    scopus 로고
    • Naive Bayesian classifier for rapid assignment of r RNA sequences into the new bacterial taxonomy
    • Wang Q, Garrity GM, Tiedje JM, Cole Jr. (2007). Naive Bayesian classifier for rapid assignment of r RNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73: 5261-5267.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 5261-5267
    • Wang, Q.1    Garrity, G.M.2    Tiedje, J.M.3    Cole, J.R.4
  • 50
    • 66249129571 scopus 로고    scopus 로고
    • Twin studies reveal specific imbalances in the mucosa-associated micro-biota of patients with ileal Crohn's disease
    • Willing B, Halfvarson J, Dicksved J, Rosenquist M, Jarnerot G, Engstrand L et al. (2009). Twin studies reveal specific imbalances in the mucosa-associated micro-biota of patients with ileal Crohn's disease. Inflamm Bowel Dis 15: 653-660.
    • (2009) Inflamm Bowel Dis , vol.15 , pp. 653-660
    • Willing, B.1    Halfvarson, J.2    Dicksved, J.3    Rosenquist, M.4    Jarnerot, G.5    Engstrand, L.6
  • 52
    • 33644844279 scopus 로고    scopus 로고
    • Helicobacter pylori infection and colorectal cancer risk: A meta-analysis
    • Zumkeller N, Brenner H, Zwahlen M, Rothenbacher D. (2006). Helicobacter pylori infection and colorectal cancer risk: a meta-analysis. Helicobacter 11: 75-80.
    • (2006) Helicobacter , vol.11 , pp. 75-80
    • Zumkeller, N.1    Brenner, H.2    Zwahlen, M.3    Rothenbacher, D.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.