메뉴 건너뛰기




Volumn 206, Issue 10, 2012, Pages 1512-1520

High-dimensional gene expression profiling studies in high and low responders to primary smallpox vaccination

Author keywords

[No Author keywords available]

Indexed keywords

ALPHA INTERFERON; BETA INTERFERON; INTERFERON; SMALLPOX VACCINE; TRANSCRIPTOME;

EID: 84867736570     PISSN: 00221899     EISSN: None     Source Type: Journal    
DOI: 10.1093/infdis/jis546     Document Type: Article
Times cited : (24)

References (50)
  • 1
    • 28744431693 scopus 로고    scopus 로고
    • Reemergence of monkeypox: Prevalence, diagnostics, and countermeasures
    • Nalca A, Rimoin AW, Bavari S, Whitehouse CA. Reemergence of monkeypox: prevalence, diagnostics, and countermeasures. Clin Infect Dis 2005; 41:1765-71.
    • (2005) Clin Infect Dis , vol.41 , pp. 1765-1771
    • Nalca, A.1    Rimoin, A.W.2    Bavari, S.3    Whitehouse, C.A.4
  • 3
    • 33748492770 scopus 로고    scopus 로고
    • Immunity to smallpox and vaccinia: The future of smallpox vaccines
    • Lane JM. Immunity to smallpox and vaccinia: the future of smallpox vaccines. Expert Rev Clin Immunol 2006; 2:325-7.
    • (2006) Expert Rev Clin Immunol , vol.2 , pp. 325-327
    • Lane, J.M.1
  • 5
    • 77958582492 scopus 로고    scopus 로고
    • Emerg Infect Dis 2010; 16:1539-45.
    • (2010) Emerg Infect Dis , vol.16 , pp. 1539-1545
  • 6
    • 84859482977 scopus 로고    scopus 로고
    • Human and animal infections by vaccinia-like viruses in the state of Rio de Janeiro: A novel expanding zoonosis
    • Schatzmayr HG, Costa RV, Goncalves MC, D'Andrea PS, Barth OM. Human and animal infections by vaccinia-like viruses in the state of Rio de Janeiro: a novel expanding zoonosis. Vaccine 2011; 29 Suppl 4: D65-9.
    • (2011) Vaccine , vol.29 , Issue.SUPPL. 4
    • Schatzmayr, H.G.1    Costa, R.V.2    Goncalves, M.C.3    D'Andrea, P.S.4    Barth, O.M.5
  • 7
    • 84856683084 scopus 로고    scopus 로고
    • Outbreaks of human monkeypox after cessation of smallpox vaccination
    • Reynolds MG, Damon IK. Outbreaks of human monkeypox after cessation of smallpox vaccination. Trends Microbiol 2012; 20:80-7.
    • (2012) Trends Microbiol , vol.20 , pp. 80-87
    • Reynolds, M.G.1    Damon, I.K.2
  • 8
    • 67650700335 scopus 로고    scopus 로고
    • When good vaccines go wild: Feral Orthopoxvirus in developing countries and beyond
    • Moussatche N, Damaso CR, McFadden G. When good vaccines go wild: Feral Orthopoxvirus in developing countries and beyond. J Infect Dev Ctries 2008; 2:156-73.
    • (2008) J Infect Dev Ctries , vol.2 , pp. 156-173
    • Moussatche, N.1    Damaso, C.R.2    McFadden, G.3
  • 9
    • 34848912220 scopus 로고    scopus 로고
    • Spectrum of Infection and Risk Factors for Human Monkeypox United States 2003
    • Reynolds MG, Davidson WB, Curns AT, et al. Spectrum of infection and risk factors for human monkeypox, United States, 2003. Emerg Infect Dis 2007; 13:1332-9.
    • (2007) Emerg Infect Dis , vol.13 , pp. 1332-1339
    • Reynolds, M.G.1    Davidson, W.B.2    Curns, A.T.3
  • 11
    • 67249108642 scopus 로고    scopus 로고
    • Gender effects on humoral immune response to smallpox vaccine
    • Kennedy R, Ovsyannikova IG, Pankratz VS, et al. Gender effects on humoral immune response to smallpox vaccine. Vaccine 2008; 27:3319-23.
    • (2008) Vaccine , vol.27 , pp. 3319-3323
    • Kennedy, R.1    Ovsyannikova, I.G.2    Pankratz, V.S.3
  • 12
    • 79960142368 scopus 로고    scopus 로고
    • Common SNPs/haplotypes in IL18R1 and IL18 genes are associated with variations in humoral immunity to smallpox vaccination in Caucasians and African Americans
    • Haralambieva IH, Ovsyannikova IG, Dhiman N, et al. Common SNPs/haplotypes in IL18R1 and IL18 genes are associated with variations in humoral immunity to smallpox vaccination in Caucasians and African Americans. J Infect Dis 2011; 204:433-41.
    • (2011) J Infect Dis , vol.204 , pp. 433-441
    • Haralambieva, I.H.1    Ovsyannikova, I.G.2    Dhiman, N.3
  • 13
    • 68149161001 scopus 로고    scopus 로고
    • Statistical approach to estimate vaccinia-specific neutralizing antibody titers using a high-throughput assay
    • Kennedy R, Pankratz VS, Swanson E, Watson D, Golding H, Poland GA. Statistical approach to estimate vaccinia-specific neutralizing antibody titers using a high-throughput assay. Clin Vaccine Immunol 2009; 16:1105-12.
    • (2009) Clin Vaccine Immunol , vol.16 , pp. 1105-1112
    • Kennedy, R.1    Pankratz, V.S.2    Swanson, E.3    Watson, D.4    Golding, H.5    Poland, G.A.6
  • 14
    • 80054723800 scopus 로고    scopus 로고
    • Correlations between vaccinia-specific immune responses within a cohort of armed forces members
    • Umlauf BJ, Ovsyannikova IG, Haralambieva IH, et al. Correlations between vaccinia-specific immune responses within a cohort of armed forces members. Viral Immunol 2011; 24:415-20.
    • (2011) Viral Immunol , vol.24 , pp. 415-420
    • Umlauf, B.J.1    Ovsyannikova, I.G.2    Haralambieva, I.H.3
  • 15
    • 79952316511 scopus 로고    scopus 로고
    • Optimizing high dimensional gene expression studies for immune response following smallpox vaccination using Taqman(R) Low density immune arrays
    • Oberg AL, Dhiman N, Grill DE, Ryan JE, Kennedy RB, Poland GA. Optimizing high dimensional gene expression studies for immune response following smallpox vaccination using Taqman(R) Low density immune arrays. J Immunol Methods 2011; 366:69-78.
    • (2011) J Immunol Methods , vol.366 , pp. 69-78
    • Oberg, A.L.1    Dhiman, N.2    Grill, D.E.3    Ryan, J.E.4    Kennedy, R.B.5    Poland, G.A.6
  • 16
    • 0036376993 scopus 로고    scopus 로고
    • Statistical methods for identifying genes with differential expression in replicated cDNA microarray experiments
    • Dudoit S, Yang YH, Callow MJ, Speed TP. Statistical methods for identifying genes with differential expression in replicated cDNA microarray experiments. Statistica Sinica 2002; 12:111-39.
    • (2002) Statistica Sinica , vol.12 , pp. 111-139
    • Dudoit, S.1    Yang, Y.H.2    Callow, M.J.3    Speed, T.P.4
  • 18
    • 0036126861 scopus 로고    scopus 로고
    • A systematic statistical linear modeling approach to oligonucleotide array experiments
    • Chu TM, Weir B, Wolfinger R. A systematic statistical linear modeling approach to oligonucleotide array experiments. Math Biosci 2002; 176:35-51.
    • (2002) Math Biosci , vol.176 , pp. 35-51
    • Chu, T.M.1    Weir, B.2    Wolfinger, R.3
  • 21
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc Series B 1995; 57:289-300.
    • (1995) J R Stat Soc Series B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 22
    • 0042424602 scopus 로고    scopus 로고
    • Statistical significance for genomewide studies
    • Storey JD, Tibshirani R. Statistical significance for genomewide studies. Proc Natl Acad Sci USA 2003; 100:9440-5.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 9440-9445
    • Storey, J.D.1    Tibshirani, R.2
  • 24
    • 46349088009 scopus 로고    scopus 로고
    • Genetic basis for adverse events after smallpox vaccination
    • Reif DM, McKinney BA, Motsinger AA, et al. Genetic basis for adverse events after smallpox vaccination. J Infect Dis 2008; 198:1-7.
    • (2008) J Infect Dis , vol.198 , pp. 1-7
    • Reif, D.M.1    McKinney, B.A.2    Motsinger, A.A.3
  • 25
    • 33746778387 scopus 로고    scopus 로고
    • Cytokine expression patterns associated with systemic adverse events following smallpox immunization
    • McKinney BA, Reif DM, Rock MT, et al. Cytokine expression patterns associated with systemic adverse events following smallpox immunization. J Infect Dis 2006; 194:444-53.
    • (2006) J Infect Dis , vol.194 , pp. 444-453
    • McKinney, B.A.1    Reif, D.M.2    Rock, M.T.3
  • 26
    • 61849131114 scopus 로고    scopus 로고
    • Integrated analysis of genetic and proteomic data identifies biomarkers associated with adverse events following smallpox vaccination
    • Reif DM, Motsinger-Reif AA, McKinney BA, Rock MT, Crowe JE Jr, Moore JH. Integrated analysis of genetic and proteomic data identifies biomarkers associated with adverse events following smallpox vaccination. Genes Immun 2009; 10:112-9.
    • (2009) Genes Immun , vol.10 , pp. 112-119
    • Reif, D.M.1    Motsinger-Reif, A.A.2    McKinney, B.A.3    Rock, M.T.4    Crowe Jr., J.E.5    Moore, J.H.6
  • 27
    • 78649701338 scopus 로고    scopus 로고
    • Surfing a genetic association interaction network to identify modulators of antibody response to smallpox vaccine
    • Davis NA, Crowe JE Jr, Pajewski NM, McKinney BA. Surfing a genetic association interaction network to identify modulators of antibody response to smallpox vaccine. Genes Immun 2010; 11:630-6.
    • (2010) Genes Immun , vol.11 , pp. 630-636
    • Davis, N.A.1    Crowe Jr., J.E.2    Pajewski, N.M.3    McKinney, B.A.4
  • 28
    • 79956226254 scopus 로고    scopus 로고
    • Human leukocyte antigen genotypes in the genetic control of adaptive immune responses to smallpox vaccine
    • Ovsyannikova IG, Vierkant RA, Pankratz VS, Jacobson RM, Poland GA. Human leukocyte antigen genotypes in the genetic control of adaptive immune responses to smallpox vaccine. J Infect Dis 2011; 203:1546-55.
    • (2011) J Infect Dis , vol.203 , pp. 1546-1555
    • Ovsyannikova, I.G.1    Vierkant, R.A.2    Pankratz, V.S.3    Jacobson, R.M.4    Poland, G.A.5
  • 29
    • 6344276562 scopus 로고    scopus 로고
    • The host response to smallpox: Analysis of the gene expression program in peripheral blood cells in a nonhuman primate model
    • Rubins KH, Hensley LE, Jahrling PB, et al. The host response to smallpox: analysis of the gene expression program in peripheral blood cells in a nonhuman primate model. Proc Natl Acad Sci USA 2004; 101:15190-5.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 15190-15195
    • Rubins, K.H.1    Hensley, L.E.2    Jahrling, P.B.3
  • 30
    • 50549101923 scopus 로고    scopus 로고
    • Gene profiling analysis of ALVAC infected human monocyte derived dendritic cells
    • Harenberg A, Guillaume F, Ryan EJ, Burdin N, Spada F. Gene profiling analysis of ALVAC infected human monocyte derived dendritic cells. Vaccine 2008; 26:5004-13.
    • (2008) Vaccine , vol.26 , pp. 5004-5013
    • Harenberg, A.1    Guillaume, F.2    Ryan, E.J.3    Burdin, N.4    Spada, F.5
  • 31
    • 34547667125 scopus 로고    scopus 로고
    • Distinct gene expression profiles in peripheral blood mononuclear cells from patients infected with vaccinia virus, yellow fever 17D virus, or upper respiratory infections
    • Scherer CA, Magness CL, Steiger KV, et al. Distinct gene expression profiles in peripheral blood mononuclear cells from patients infected with vaccinia virus, yellow fever 17D virus, or upper respiratory infections. Vaccine 2007; 25:6458-73.
    • (2007) Vaccine , vol.25 , pp. 6458-6473
    • Scherer, C.A.1    Magness, C.L.2    Steiger, K.V.3
  • 32
    • 34547747839 scopus 로고    scopus 로고
    • Distinct gene expression profiling after infection of immature human monocyte-derived dendritic cells by the attenuated poxvirus vectors MVA and NYVAC
    • Guerra S, Najera JL, Gonzalez JM, et al. Distinct gene expression profiling after infection of immature human monocyte-derived dendritic cells by the attenuated poxvirus vectors MVA and NYVAC. J Virol 2007; 81:8707-21.
    • (2007) J Virol , vol.81 , pp. 8707-8721
    • Guerra, S.1    Najera, J.L.2    Gonzalez, J.M.3
  • 33
    • 2442638941 scopus 로고    scopus 로고
    • Microarray analysis reveals characteristic changes of host cell gene expression in response to attenuated modified vaccinia virus Ankara infection of human HeLa cells
    • Guerra S, Lopez-Fernandez LA, Conde R, Pascual-Montano A, Harshman K, Esteban M. Microarray analysis reveals characteristic changes of host cell gene expression in response to attenuated modified vaccinia virus Ankara infection of human HeLa cells. J Virol 2004; 78:5820-34.
    • (2004) J Virol , vol.78 , pp. 5820-5834
    • Guerra, S.1    Lopez-Fernandez, L.A.2    Conde, R.3    Pascual-Montano, A.4    Harshman, K.5    Esteban, M.6
  • 34
    • 0033861952 scopus 로고    scopus 로고
    • Death and decoy receptors and p53-mediated apoptosis
    • Sheikh MS, Fornace AJ Jr. Death and decoy receptors and p53-mediated apoptosis. Leukemia 2000; 14:1509-13.
    • (2000) Leukemia , vol.14 , pp. 1509-1513
    • Sheikh, M.S.1    Fornace Jr., A.J.2
  • 35
    • 77954934610 scopus 로고    scopus 로고
    • Simultaneous high-resolution analysis of vaccinia virus and host cell transcriptomes by deep RNA sequencing
    • Yang Z, Bruno DP, Martens CA, Porcella SF, Moss B. Simultaneous high-resolution analysis of vaccinia virus and host cell transcriptomes by deep RNA sequencing. Proc Natl Acad Sci USA 2010; 107:11513-8.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 11513-11518
    • Yang, Z.1    Bruno, D.P.2    Martens, C.A.3    Porcella, S.F.4    Moss, B.5
  • 36
    • 77957194670 scopus 로고    scopus 로고
    • Viral cell death inhibitor MC159 enhances innate immunity against vaccinia virus infection
    • Challa S, Woelfel M, Guildford M, Moquin D, Chan FK. Viral cell death inhibitor MC159 enhances innate immunity against vaccinia virus infection. J Virol 2010; 84:10467-76.
    • (2010) J Virol , vol.84 , pp. 10467-10476
    • Challa, S.1    Woelfel, M.2    Guildford, M.3    Moquin, D.4    Chan, F.K.5
  • 37
    • 0030933151 scopus 로고    scopus 로고
    • The role of the Ikaros gene in lymphocyte development and homeostasis
    • Georgopoulos K, Winandy S, Avitahl N. The role of the Ikaros gene in lymphocyte development and homeostasis. Annu Rev Immunol 1997; 15:155-76.
    • (1997) Annu Rev Immunol , vol.15 , pp. 155-176
    • Georgopoulos, K.1    Winandy, S.2    Avitahl, N.3
  • 38
    • 0036041898 scopus 로고    scopus 로고
    • Interleukin 17 modulates the immune response to vaccinia virus infection
    • Patera AC, Pesnicak L, Bertin J, Cohen JI. Interleukin 17 modulates the immune response to vaccinia virus infection. Virology 2002; 299:56-63.
    • (2002) Virology , vol.299 , pp. 56-63
    • Patera, A.C.1    Pesnicak, L.2    Bertin, J.3    Cohen, J.I.4
  • 39
    • 67349127266 scopus 로고    scopus 로고
    • Prostaglandin E2-EP4 signaling promotes immune inflammation through Th1 cell differentiation and Th17 cell expansion
    • Yao C, Sakata D, Esaki Y, et al. Prostaglandin E2-EP4 signaling promotes immune inflammation through Th1 cell differentiation and Th17 cell expansion. Nat Med 2009; 15:633-40.
    • (2009) Nat Med , vol.15 , pp. 633-640
    • Yao, C.1    Sakata, D.2    Esaki, Y.3
  • 40
    • 23944509107 scopus 로고    scopus 로고
    • Toll-like receptor 8-mediated reversal of CD4+ regulatory T cell function
    • Peng G, Guo Z, Kiniwa Y, et al. Toll-like receptor 8-mediated reversal of CD4+ regulatory T cell function. Science 2005; 309: 1380-4.
    • (2005) Science , vol.309 , pp. 1380-1384
    • Peng, G.1    Guo, Z.2    Kiniwa, Y.3
  • 41
    • 6344274704 scopus 로고    scopus 로고
    • The B lymphocyte adaptor molecule of 32 kilodaltons (Bam32) regulates B cell antigen receptor internalization
    • Niiro H, Allam A, Stoddart A, Brodsky FM, Marshall AJ, Clark EA. The B lymphocyte adaptor molecule of 32 kilodaltons (Bam32) regulates B cell antigen receptor internalization. J Immunol 2004; 173:5601-9.
    • (2004) J Immunol , vol.173 , pp. 5601-5609
    • Niiro, H.1    Allam, A.2    Stoddart, A.3    Brodsky, F.M.4    Marshall, A.J.5    Clark, E.A.6
  • 42
    • 79960994652 scopus 로고    scopus 로고
    • Lysosome-associated membrane glycoprotein 3 is involved in influenza A virus replication in human lung epithelial (A549) cells
    • Zhou Z, Xue Q, Wan Y, Yang Y, Wang J, Hung T. Lysosome-associated membrane glycoprotein 3 is involved in influenza A virus replication in human lung epithelial (A549) cells. Virol J 2011; 8:384.
    • (2011) Virol J , vol.8 , pp. 384
    • Zhou, Z.1    Xue, Q.2    Wan, Y.3    Yang, Y.4    Wang, J.5    Hung, T.6
  • 43
    • 36348940608 scopus 로고    scopus 로고
    • Interferons and viruses: An interplay between induction, signalling, antiviral responses and virus countermeasures
    • Randall RE, Goodbourn S. Interferons and viruses: an interplay between induction, signalling, antiviral responses and virus countermeasures. J Gen Virol 2008; 89(Pt 1):1-47.
    • (2008) J Gen Virol , vol.89 , Issue.PART 1 , pp. 1-47
    • Randall, R.E.1    Goodbourn, S.2
  • 44
    • 46249115827 scopus 로고    scopus 로고
    • Interferon-inducible antiviral effectors
    • Sadler AJ, Williams BR. Interferon-inducible antiviral effectors. Nat Rev Immunol 2008; 8:559-68.
    • (2008) Nat Rev Immunol , vol.8 , pp. 559-568
    • Sadler, A.J.1    Williams, B.R.2
  • 45
    • 33846232145 scopus 로고    scopus 로고
    • Innate immunity against vaccinia virus is mediated by TLR2 and requires TLR-independent production of IFN-beta
    • Zhu J, Martinez J, Huang X, Yang Y. Innate immunity against vaccinia virus is mediated by TLR2 and requires TLR-independent production of IFN-beta. Blood 2007; 109:619-25.
    • (2007) Blood , vol.109 , pp. 619-625
    • Zhu, J.1    Martinez, J.2    Huang, X.3    Yang, Y.4
  • 46
    • 75649144807 scopus 로고    scopus 로고
    • Polymorphisms in the vitamin A receptor and innate immunity genes influence the antibody response to rubella vaccination
    • Ovsyannikova IG, Haralambieva IH, Dhiman N, et al. Polymorphisms in the vitamin A receptor and innate immunity genes influence the antibody response to rubella vaccination. J Infect Dis 2010; 201:207-13.
    • (2010) J Infect Dis , vol.201 , pp. 207-213
    • Ovsyannikova, I.G.1    Haralambieva, I.H.2    Dhiman, N.3
  • 47
    • 76249083876 scopus 로고    scopus 로고
    • Rubella vaccine-induced cellular immunity: Evidence of associations with polymorphisms in the Toll-like, vitamin A and D receptors, and innate immune response genes
    • Ovsyannikova IG, Dhiman N, Haralambieva IH, et al. Rubella vaccine-induced cellular immunity: evidence of associations with polymorphisms in the Toll-like, vitamin A and D receptors, and innate immune response genes. Hum Genet 2010; 127:207-21.
    • (2010) Hum Genet , vol.127 , pp. 207-221
    • Ovsyannikova, I.G.1    Dhiman, N.2    Haralambieva, I.H.3
  • 48
    • 77950533454 scopus 로고    scopus 로고
    • 2′-5′-Oligoadenylate synthetase single-nucleotide polymorphisms and haplotypes are associated with variations in immune responses to rubella vaccine
    • Haralambieva IH, Dhiman N, Ovsyannikova IG, et al. 2′-5′- Oligoadenylate synthetase single-nucleotide polymorphisms and haplotypes are associated with variations in immune responses to rubella vaccine. Hum Immunol 2010; 71:383-91.
    • (2010) Hum Immunol , vol.71 , pp. 383-391
    • Haralambieva, I.H.1    Dhiman, N.2    Ovsyannikova, I.G.3
  • 49
    • 82455175351 scopus 로고    scopus 로고
    • Genetic polymorphisms in host antiviral genes: Associations with humoral and cellular immunity to measles vaccine
    • Haralambieva IH, Ovsyannikova IG, Umlauf BJ, et al. Genetic polymorphisms in host antiviral genes: associations with humoral and cellular immunity to measles vaccine. Vaccine 2011; 29:8988-97.
    • (2011) Vaccine , vol.29 , pp. 8988-8997
    • Haralambieva, I.H.1    Ovsyannikova, I.G.2    Umlauf, B.J.3
  • 50
    • 78650487502 scopus 로고    scopus 로고
    • Vaccinomics, predictive vaccinology and the future of vaccine development
    • Haralambieva IH, Poland GA. Vaccinomics, predictive vaccinology and the future of vaccine development. Future Microbiol 2010; 5:1757-60.
    • (2010) Future Microbiol , vol.5 , pp. 1757-1760
    • Haralambieva, I.H.1    Poland, G.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.