-
1
-
-
70249103853
-
25 years of HIV research!... and what about a vaccine?
-
Appay, V. (2009). 25 years of HIV research!...and what about a vaccine? Eur. J. Immunol. 39, 1999-2003.
-
(2009)
Eur. J. Immunol.
, vol.39
, pp. 1999-2003
-
-
Appay, V.1
-
2
-
-
77949263061
-
Mosaic HIV-1 vaccines expand the breadth and depth of cellular immune responses in rhesus monkeys
-
Barouch, D. H., O'brien, K. L., Simmons, N. L., King, S. L., Abbink, P., Maxfield, L. F., Sun, Y. H., La Porte, A., Riggs, A. M., Lynch, D. M., Clark, S. L., Backus, K., Perry, J. R., Seaman, M. S., Carville, A., Mansfield, K. G., Szinger, J. J., Fischer, W., Muldoon, M., and Korber, B. (2010). Mosaic HIV-1 vaccines expand the breadth and depth of cellular immune responses in rhesus monkeys. Nat. Med. 16, 319-323.
-
(2010)
Nat. Med.
, vol.16
, pp. 319-323
-
-
Barouch, D.H.1
O'brien, K.L.2
Simmons, N.L.3
King, S.L.4
Abbink, P.5
Maxfield, L.F.6
Sun, Y.H.7
La Porte, A.8
Riggs, A.M.9
Lynch, D.M.10
Clark, S.L.11
Backus, K.12
Perry, J.R.13
Seaman, M.S.14
Carville, A.15
Mansfield, K.G.16
Szinger, J.J.17
Fischer, W.18
Muldoon, M.19
Korber, B.20
more..
-
3
-
-
75549090056
-
-
Benson, D. A., Karsch-Mizrachi, I., Lipman, D. J., Ostell, J., and Sayers, E. W. (2010). GenBank. Nucleic Acids Res. 38, D46-D51.
-
(2010)
GenBank. Nucleic Acids Res
, vol.38
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Sayers, E.W.5
-
4
-
-
0027217789
-
Threedimensional structure of the human class II histocompatibility antigen HLA-DR1
-
Brown, J. H., Jardetzky, T. S., Gorga,J. C., Stern, L. J., Urban, R. G., Strominger, J. L., and Wiley, D. C. (1993). Threedimensional structure of the human class II histocompatibility antigen HLA-DR1. Nature 364, 33-39.
-
(1993)
Nature
, vol.364
, pp. 33-39
-
-
Brown, J.H.1
Jardetzky, T.S.2
Gorga, J.C.3
Stern, L.J.4
Urban, R.G.5
Strominger, J.L.6
Wiley, D.C.7
-
5
-
-
67349182104
-
Prospects for an influenza vaccine that induces cross-protective cytotoxic T lymphocytes
-
Brown, L. E., and Kelso, A. (2009). Prospects for an influenza vaccine that induces cross-protective cytotoxic T lymphocytes. Immunol. Cell Biol. 87, 300-308.
-
(2009)
Immunol. Cell Biol.
, vol.87
, pp. 300-308
-
-
Brown, L.E.1
Kelso, A.2
-
6
-
-
4544372674
-
The changing field of vaccine development in the genomics era
-
Brusic, V., and August, J. T. (2004). The changing field of vaccine development in the genomics era. Pharmacogenomics 5, 597-600.
-
(2004)
Pharmacogenomics
, vol.5
, pp. 597-600
-
-
Brusic, V.1
August, J.T.2
-
7
-
-
2142738304
-
WebLogo: a sequence logo generator
-
Crooks, G. E., Hon, G., Chandonia, J. M., and Brenner, S. E. (2004). WebLogo: a sequence logo generator. Genome Res. 14, 1188-1190.
-
(2004)
Genome Res
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
-
8
-
-
14844302633
-
HIV vaccine development by computer assisted design: the GAIA vaccine
-
De Groot, A. S., Marcon, L., Bishop, E. A., Rivera, D., Kutzler, M., Weiner, D. B., and Martin, W. (2005). HIV vaccine development by computer assisted design: the GAIA vaccine. Vaccine 23, 2136-2148.
-
(2005)
Vaccine
, vol.23
, pp. 2136-2148
-
-
De Groot, A.S.1
Marcon, L.2
Bishop, E.A.3
Rivera, D.4
Kutzler, M.5
Weiner, D.B.6
Martin, W.7
-
10
-
-
78049244414
-
Immunodominant T-cell responses to dengue virus NS3 are associated with DHF
-
Duangchinda, T., Dejnirattisai, W., Vasanawathana, S., Limpitikul, W., Tangthawornchaikul, N., Malasit, P., Mongkolsapaya, J., and Screaton, G. (2010). Immunodominant T-cell responses to dengue virus NS3 are associated with DHF. Proc. Natl. Acad. Sci. U.S.A. 107, 16922-16927.
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 16922-16927
-
-
Duangchinda, T.1
Dejnirattisai, W.2
Vasanawathana, S.3
Limpitikul, W.4
Tangthawornchaikul, N.5
Malasit, P.6
Mongkolsapaya, J.7
Screaton, G.8
-
11
-
-
0025855156
-
Allele-specific motifs revealed by sequencing of selfpeptides eluted from MHC molecules
-
Falk, K., Rotzschke, O., Stevanovic, S., Jung, G., and Rammensee, H. G. (1991). Allele-specific motifs revealed by sequencing of selfpeptides eluted from MHC molecules. Nature 351, 290-296.
-
(1991)
Nature
, vol.351
, pp. 290-296
-
-
Falk, K.1
Rotzschke, O.2
Stevanovic, S.3
Jung, G.4
Rammensee, H.G.5
-
12
-
-
33846111016
-
Polyvalent vaccines for optimal coverage of potential T-cell epitopes in global HIV-1 variants
-
Fischer, W., Perkins, S., Theiler, J., Bhattacharya, T., Yusim, K., Funkhouser, R., Kuiken, C., Haynes, B., Letvin, N. L., Walker, B. D., Hahn, B. H., and Korber, B. T. (2007). Polyvalent vaccines for optimal coverage of potential T-cell epitopes in global HIV-1 variants. Nat. Med. 13, 100-106.
-
(2007)
Nat. Med.
, vol.13
, pp. 100-106
-
-
Fischer, W.1
Perkins, S.2
Theiler, J.3
Bhattacharya, T.4
Yusim, K.5
Funkhouser, R.6
Kuiken, C.7
Haynes, B.8
Letvin, N.L.9
Walker, B.D.10
Hahn, B.H.11
Korber, B.T.12
-
13
-
-
77956515986
-
The dengue threat to the United States
-
Franco, C., Hynes, N. A., Bouri, N., and Henderson, D. A. (2010). The dengue threat to the United States. Biosecur. Bioterror. 8, 273-276.
-
(2010)
Biosecur. Bioterror.
, vol.8
, pp. 273-276
-
-
Franco, C.1
Hynes, N.A.2
Bouri, N.3
Henderson, D.A.4
-
14
-
-
19944427052
-
Antigenicity and immunogenicity of a synthetic human immunodeficiency virus type 1 group m consensus envelope glycoprotein
-
Gao, F., Weaver, E. A., Lu, Z., Li, Y., Liao, H. X., Ma, B., Alam, S. M., Scearce, R. M., Sutherland, L. L., Yu, J. S., Decker, J. M., Shaw, G. M., Montefiori, D. C., Korber, B. T., Hahn, B. H., and Haynes, B. F. (2005). Antigenicity and immunogenicity of a synthetic human immunodeficiency virus type 1 group m consensus envelope glycoprotein. J. Virol. 79, 1154-1163.
-
(2005)
J. Virol.
, vol.79
, pp. 1154-1163
-
-
Gao, F.1
Weaver, E.A.2
Lu, Z.3
Li, Y.4
Liao, H.X.5
Ma, B.6
Alam, S.M.7
Scearce, R.M.8
Sutherland, L.L.9
Yu, J.S.10
Decker, J.M.11
Shaw, G.M.12
Montefiori, D.C.13
Korber, B.T.14
Hahn, B.H.15
Haynes, B.F.16
-
15
-
-
0037189323
-
Diversity considerations in HIV-1 vaccine selection
-
Gaschen, B., Taylor, J., Yusim, K., Foley, B., Gao, F., Lang, D., Novitsky, V., Haynes, B., Hahn, B. H., Bhattacharya, T., and Korber, B. (2002). Diversity considerations in HIV-1 vaccine selection. Science 296, 2354-2360.
-
(2002)
Science
, vol.296
, pp. 2354-2360
-
-
Gaschen, B.1
Taylor, J.2
Yusim, K.3
Foley, B.4
Gao, F.5
Lang, D.6
Novitsky, V.7
Haynes, B.8
Hahn, B.H.9
Bhattacharya, T.10
Korber, B.11
-
16
-
-
78649384507
-
Development of Sanofi Pasteur tetravalent dengue vaccine
-
Guy, B., Saville, M., and Lang, J. (2010). Development of Sanofi Pasteur tetravalent dengue vaccine. Hum. Vaccin. 6, 696-705.
-
(2010)
Hum. Vaccin.
, vol.6
, pp. 696-705
-
-
Guy, B.1
Saville, M.2
Lang, J.3
-
17
-
-
0017685279
-
Dengue viruses and mononuclear phagocytes. I. Infection enhancement by nonneutralizing antibody
-
Halstead, S. B., and O'rourke, E. J. (1977). Dengue viruses and mononuclear phagocytes. I. Infection enhancement by nonneutralizing antibody. J. Exp. Med. 146, 201-217.
-
(1977)
J. Exp. Med.
, vol.146
, pp. 201-217
-
-
Halstead, S.B.1
O'rourke, E.J.2
-
18
-
-
0017646672
-
Dengue viruses and mononuclear phagocytes. II. Identity of blood and tissue leukocytes supporting in vitro infection
-
Halstead, S. B., O'rourke, E. J., and Allison, A. C. (1977). Dengue viruses and mononuclear phagocytes. II. Identity of blood and tissue leukocytes supporting in vitro infection. J. Exp. Med. 146, 218-229.
-
(1977)
J. Exp. Med.
, vol.146
, pp. 218-229
-
-
Halstead, S.B.1
O'rourke, E.J.2
Allison, A.C.3
-
19
-
-
78651412184
-
Mapping the landscape of host-pathogen coevolution: HLA class I binding and its relationship with evolutionary conservation in human and viral proteins
-
Hertz, T., Nolan, D., James, I., John, M., Gaudieri, S., Phillips, E., Huang, J. C., Riadi, G., Mallal, S., and Jojic, N. (2011). Mapping the landscape of host-pathogen coevolution: HLA class I binding and its relationship with evolutionary conservation in human and viral proteins. J. Virol. 85, 1310-1321.
-
(2011)
J. Virol.
, vol.85
, pp. 1310-1321
-
-
Hertz, T.1
Nolan, D.2
James, I.3
John, M.4
Gaudieri, S.5
Phillips, E.6
Huang, J.C.7
Riadi, G.8
Mallal, S.9
Jojic, N.10
-
20
-
-
13344278708
-
The emerging genetic diversity of HIV. The importance of global surveillance for diagnostics, research, and prevention
-
Hu, D. J., Dondero, T. J., Rayfield, M. A., George, J. R., Schochetman, G., Jaffe, H. W., Luo, C. C., Kalish, M. L., Weniger, B. G., Pau, C. P., Schable, C. A., and Curran, J. W. (1996). The emerging genetic diversity of HIV. The importance of global surveillance for diagnostics, research, and prevention. JAMA 275, 210-216.
-
(1996)
JAMA
, vol.275
, pp. 210-216
-
-
Hu, D.J.1
Dondero, T.J.2
Rayfield, M.A.3
George, J.R.4
Schochetman, G.5
Jaffe, H.W.6
Luo, C.C.7
Kalish, M.L.8
Weniger, B.G.9
Pau, C.P.10
Schable, C.A.11
Curran, J.W.12
-
21
-
-
45949107473
-
Recent developments in the MAFFT multiple sequence alignment program
-
Katoh, K., and Toh, H. (2008). Recent developments in the MAFFT multiple sequence alignment program. Brief. Bioinformatics 9, 286-298.
-
(2008)
Brief. Bioinformatics
, vol.9
, pp. 286-298
-
-
Katoh, K.1
Toh, H.2
-
22
-
-
56149120245
-
Conservation and variability of dengue virus proteins: implications for vaccine design
-
doi:10.1371/journal.pntd.0000272
-
Khan, A. M., Miotto, O., Nascimento, E. J., Srinivasan, K. N., Heiny, A. T., Zhang, G. L., Marques, E. T., Tan, T. W., Brusic, V., Salmon, J., and August, J. T. (2008). Conservation and variability of dengue virus proteins: implications for vaccine design. PLoS Negl. Trop. Dis. 2, e272. doi:10.1371/journal.pntd.0000272
-
(2008)
PLoS Negl. Trop. Dis.
, vol.2
-
-
Khan, A.M.1
Miotto, O.2
Nascimento, E.J.3
Srinivasan, K.N.4
Heiny, A.T.5
Zhang, G.L.6
Marques, E.T.7
Tan, T.W.8
Brusic, V.9
Salmon, J.10
August, J.T.11
-
23
-
-
65549120233
-
Conservation and variability of West Nile virus proteins
-
doi:10.1371/journal.pone.0005352
-
Koo, Q. Y., Khan, A. M., Jung, K. O., Ramdas, S., Miotto, O., Tan, T. W., Brusic, V., Salmon, J., and August, J. T. (2009). Conservation and variability of West Nile virus proteins. PLoS ONE 4, e5352. doi:10.1371/journal.pone.0005352
-
(2009)
PLoS ONE
, vol.4
-
-
Koo, Q.Y.1
Khan, A.M.2
Jung, K.O.3
Ramdas, S.4
Miotto, O.5
Tan, T.W.6
Brusic, V.7
Salmon, J.8
August, J.T.9
-
24
-
-
42549105195
-
Evaluation of MHC class I peptide binding prediction servers: applications for vaccine research
-
doi:10.1186/1471-2172-9-8
-
Lin, H. H., Ray, S., Tongchusak, S., Reinherz, E. L., and Brusic, V. (2008). Evaluation of MHC class I peptide binding prediction servers: applications for vaccine research. BMC Immunol. 9, 8. doi:10.1186/1471-2172-9-8
-
(2008)
BMC Immunol
, vol.9
, pp. 8
-
-
Lin, H.H.1
Ray, S.2
Tongchusak, S.3
Reinherz, E.L.4
Brusic, V.5
-
25
-
-
0030596404
-
High statistics block entropy measures of DNA sequences
-
Lio, P., Politi, A., Buiatti, M., and Ruffo, S. (1996). High statistics block entropy measures of DNA sequences. J. Theor. Biol. 180, 151-160.
-
(1996)
J. Theor. Biol.
, vol.180
, pp. 151-160
-
-
Lio, P.1
Politi, A.2
Buiatti, M.3
Ruffo, S.4
-
26
-
-
48449106045
-
NetMHC-3.0: accurate web accessible predictions of human,mouse and monkey MHC class I affinities for peptides of length 8-11
-
Lundegaard, C., Lamberth, K., Harndahl, M., Buus, S., Lund, O., and Nielsen, M. (2008). NetMHC-3.0: accurate web accessible predictions of human,mouse and monkey MHC class I affinities for peptides of length 8-11. Nucleic Acids Res. 36, W509- W512.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Lundegaard, C.1
Lamberth, K.2
Harndahl, M.3
Buus, S.4
Lund, O.5
Nielsen, M.6
-
27
-
-
10944252079
-
Emerging flaviviruses: the spread and resurgence of Japanese encephalitis. West Nile and dengue viruses
-
Mackenzie, J. S., Gubler, D. J., and Petersen, L. R. (2004). Emerging flaviviruses: the spread and resurgence of Japanese encephalitis, West Nile and dengue viruses. Nat. Med. 10, S98-S109.
-
(2004)
Nat. Med.
, vol.10
-
-
Mackenzie, J.S.1
Gubler, D.J.2
Petersen, L.R.3
-
28
-
-
67650258218
-
T-cell epitope processing (the epitope flanking regions matter)
-
Martinez, A. N., Tenzer, S., and Schild, H. (2009). T-cell epitope processing (the epitope flanking regions matter). Methods Mol. Biol. 524, 407-415.
-
(2009)
Methods Mol. Biol.
, vol.524
, pp. 407-415
-
-
Martinez, A.N.1
Tenzer, S.2
Schild, H.3
-
29
-
-
75649131888
-
A novel tetravalent dengue vaccine is well tolerated and immunogenic against all 4 serotypes in Flavivirus-naive adults
-
Morrison, D., Legg, T. J., Billings, C. W., Forrat, R., Yoksan, S., and Lang, J. (2010). A novel tetravalent dengue vaccine is well tolerated and immunogenic against all 4 serotypes in Flavivirus-naive adults. J. Infect. Dis. 201, 370-377.
-
(2010)
J. Infect. Dis.
, vol.201
, pp. 370-377
-
-
Morrison, D.1
Legg, T.J.2
Billings, C.W.3
Forrat, R.4
Yoksan, S.5
Lang, J.6
-
30
-
-
79251595840
-
Review of dengue virus and the development of a vaccine
-
Murrell, S., Wu, S. C., and Butler, M. (2011). Review of dengue virus and the development of a vaccine. Biotechnol. Adv. 29, 239-247.
-
(2011)
Biotechnol. Adv.
, vol.29
, pp. 239-247
-
-
Murrell, S.1
Wu, S.C.2
Butler, M.3
-
31
-
-
34247627073
-
Coping with viral diversity in HIV vaccine design
-
doi:10.1371/journal.pcbi.0030075
-
Nickle, D. C., Rolland, M., Jensen, M. A., Pond, S. L., Deng, W., Seligman, M., Heckerman, D., Mullins, J. I., and Jojic, N. (2007). Coping with viral diversity in HIV vaccine design. PLoS Comput. Biol. 3, e75. doi:10.1371/journal.pcbi.0030075
-
(2007)
PLoS Comput. Biol.
, vol.3
-
-
Nickle, D.C.1
Rolland, M.2
Jensen, M.A.3
Pond, S.L.4
Deng, W.5
Seligman, M.6
Heckerman, D.7
Mullins, J.I.8
Jojic, N.9
-
32
-
-
1142274484
-
The many important facets of T-cell repertoire diversity
-
Nikolich-Zugich, J., Slifka, M. K., and Messaoudi, I. (2004). The many important facets of T-cell repertoire diversity. Nat. Rev. Immunol. 4, 123-132.
-
(2004)
Nat. Rev. Immunol.
, vol.4
, pp. 123-132
-
-
Nikolich-Zugich, J.1
Slifka, M.K.2
Messaoudi, I.3
-
33
-
-
84866977551
-
FLAVIdB: a data mining system for knowledge discovery in flaviviruses with direct applications in immunology and vaccinology
-
Olsen, L. R., Zhang, G. L., Reinherz, E. L., and Brusic, V. (2011). FLAVIdB: a data mining system for knowledge discovery in flaviviruses with direct applications in immunology and vaccinology. Immunome Res. 8, 1.
-
(2011)
Immunome Res
, vol.8
, pp. 1
-
-
Olsen, L.R.1
Zhang, G.L.2
Reinherz, E.L.3
Brusic, V.4
-
34
-
-
67650676855
-
Multipeptide vaccination in cancer patients
-
Pilla, L., Rivoltini, L., Patuzzo, R., Marrari, A., Valdagni, R., and Parmiani, G. (2009). Multipeptide vaccination in cancer patients. Expert Opin. Biol. Ther. 9, 1043-1055.
-
(2009)
Expert Opin. Biol. Ther.
, vol.9
, pp. 1043-1055
-
-
Pilla, L.1
Rivoltini, L.2
Patuzzo, R.3
Marrari, A.4
Valdagni, R.5
Parmiani, G.6
-
35
-
-
34247891741
-
More than one reason to rethink the use of peptides in vaccine design
-
Purcell, A. W., Mccluskey, J., and Rossjohn, J. (2007). More than one reason to rethink the use of peptides in vaccine design. Nat. Rev. Drug Discov. 6, 404-414.
-
(2007)
Nat. Rev. Drug Discov.
, vol.6
, pp. 404-414
-
-
Purcell, A.W.1
Mccluskey, J.2
Rossjohn, J.3
-
36
-
-
0033388725
-
SYFPEITHI: database for MHC ligands and peptide motifs
-
Rammensee, H., Bachmann, J., Emmerich, N. P., Bachor, O. A., and Stevanovic, S. (1999). SYFPEITHI: database for MHC ligands and peptide motifs. Immunogenetics 50, 213-219.
-
(1999)
Immunogenetics
, vol.50
, pp. 213-219
-
-
Rammensee, H.1
Bachmann, J.2
Emmerich, N.P.3
Bachor, O.A.4
Stevanovic, S.5
-
38
-
-
33748335464
-
Elicitation from virus-naive individuals of cytotoxic T lymphocytes directed against conserved HIV-1 epitopes
-
Reche, P. A., Keskin, D. B., Hussey, R. E., Ancuta, P., Gabuzda, D., and Reinherz, E. L. (2006). Elicitation from virus-naive individuals of cytotoxic T lymphocytes directed against conserved HIV-1 epitopes. Med. Immunol. 5, 1.
-
(2006)
Med. Immunol.
, vol.5
, pp. 1
-
-
Reche, P.A.1
Keskin, D.B.2
Hussey, R.E.3
Ancuta, P.4
Gabuzda, D.5
Reinherz, E.L.6
-
39
-
-
78049489760
-
Molecular detection of targeted major histocompatibility complex I-bound peptides using a probabilistic measure and nanospray MS(3) on a hybrid quadrupolelinear ion trap
-
Reinhold, B., Keskin, D. B., and Reinherz, E. L. (2010). Molecular detection of targeted major histocompatibility complex I-bound peptides using a probabilistic measure and nanospray MS(3) on a hybrid quadrupolelinear ion trap. Anal. Chem. 82, 9090-9099.
-
(2010)
Anal. Chem.
, vol.82
, pp. 9090-9099
-
-
Reinhold, B.1
Keskin, D.B.2
Reinherz, E.L.3
-
40
-
-
77956527183
-
A conserved E7derived cytotoxic T lymphocyte epitope expressed on human papillomavirus 16-transformed HLA-A2+ epithelial cancers
-
Riemer, A. B., Keskin, D. B., Zhang, G., Handley, M., Anderson, K. S., Brusic, V., Reinhold, B., and Reinherz, E. L. (2010). A conserved E7derived cytotoxic T lymphocyte epitope expressed on human papillomavirus 16-transformed HLA-A2+ epithelial cancers. J. Biol. Chem. 285, 29608-29622.
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 29608-29622
-
-
Riemer, A.B.1
Keskin, D.B.2
Zhang, G.3
Handley, M.4
Anderson, K.S.5
Brusic, V.6
Reinhold, B.7
Reinherz, E.L.8
-
41
-
-
79953142380
-
Increased breadth and depth of cytotoxic T lymphocytes responses against HIV-1-B Nef by inclusion of epitope variant sequences
-
doi:10.1371/journal.pone. 0017969
-
Rolland, M., Frahm, N., Nickle, D. C., Jojic, N., Deng, W., Allen, T. M., Brander, C., Heckerman, D. E., and Mullins, J. I. (2011). Increased breadth and depth of cytotoxic T lymphocytes responses against HIV-1-B Nef by inclusion of epitope variant sequences. PLoS ONE 6, e17969. doi:10.1371/journal.pone. 0017969
-
(2011)
PLoS ONE
, vol.6
-
-
Rolland, M.1
Frahm, N.2
Nickle, D.C.3
Jojic, N.4
Deng, W.5
Allen, T.M.6
Brander, C.7
Heckerman, D.E.8
Mullins, J.I.9
-
42
-
-
77949264937
-
Mosaic vaccines elicit CD8+ T lymphocyte responses that confer enhanced immune coverage of diverse HIV strains in monkeys
-
Santra, S., Liao, H. X., Zhang, R., Muldoon, M., Watson, S., Fischer, W., Theiler, J., Szinger, J., Balachandran, H., Buzby, A., Quinn, D., Parks, R. J., Tsao, C. Y., Carville, A., Mansfield, K. G., Pavlakis, G. N., Felber, B. K., Haynes, B. F., Korber, B. T., and Letvin, N. L. (2010). Mosaic vaccines elicit CD8+ T lymphocyte responses that confer enhanced immune coverage of diverse HIV strains in monkeys. Nat. Med. 16, 324-328.
-
(2010)
Nat. Med.
, vol.16
, pp. 324-328
-
-
Santra, S.1
Liao, H.X.2
Zhang, R.3
Muldoon, M.4
Watson, S.5
Fischer, W.6
Theiler, J.7
Szinger, J.8
Balachandran, H.9
Buzby, A.10
Quinn, D.11
Parks, R.J.12
Tsao, C.Y.13
Carville, A.14
Mansfield, K.G.15
Pavlakis, G.N.16
Felber, B.K.17
Haynes, B.F.18
Korber, B.T.19
Letvin, N.L.20
more..
-
43
-
-
0025008168
-
Sequence logos: a new way to display consensus sequences
-
Schneider, T. D., and Stephens, R. M. (1990). Sequence logos: a new way to display consensus sequences. Nucleic Acids Res. 18, 6097-6100.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 6097-6100
-
-
Schneider, T.D.1
Stephens, R.M.2
-
44
-
-
72049112542
-
Definition of epitopes and antigens recognized by vaccinia specific immune responses: their conservation in variola virus sequences, and use as a model system to study complex pathogens
-
Sette, A., Grey, H., Oseroff, C., Peters, B., Moutaftsi, M., Crotty, S., Assarsson, E., Greenbaum, J., Kim, Y., Kolla, R., Tscharke, D., Koelle, D., Johnson, R. P., Blum, J., Head, S., and Sidney, J. (2009). Definition of epitopes and antigens recognized by vaccinia specific immune responses: their conservation in variola virus sequences, and use as a model system to study complex pathogens. Vaccine 27(Suppl. 6), G21-G26.
-
(2009)
Vaccine
, vol.27
, Issue.SUPPL. 6
-
-
Sette, A.1
Grey, H.2
Oseroff, C.3
Peters, B.4
Moutaftsi, M.5
Crotty, S.6
Assarsson, E.7
Greenbaum, J.8
Kim, Y.9
Kolla, R.10
Tscharke, D.11
Koelle, D.12
Johnson, R.P.13
Blum, J.14
Head, S.15
Sidney, J.16
-
45
-
-
77958454595
-
Reverse vaccinology: developing vaccines in the era of genomics
-
Sette, A., and Rappuoli, R. (2010). Reverse vaccinology: developing vaccines in the era of genomics. Immunity 33, 530-541.
-
(2010)
Immunity
, vol.33
, pp. 530-541
-
-
Sette, A.1
Rappuoli, R.2
-
46
-
-
84856043672
-
A mathematical theory of communication
-
623-656
-
Shannon, C. E. (1948). A mathematical theory of communication. Bell Syst. Tech. J. 27, 379-423; 623-656.
-
(1948)
Bell Syst. Tech. J.
, vol.27
, pp. 379-423
-
-
Shannon, C.E.1
-
47
-
-
77649294023
-
Conservation and diversity of influenza A H1N1 HLA-restricted T cell epitope candidates for epitopebased vaccines
-
doi: 10.1371/journal.pone. 0008754
-
Tan, P. T., Heiny, A. T., Miotto, O., Salmon, J., Marques, E. T., Lemonnier, F., and August, J. T. (2010). Conservation and diversity of influenza A H1N1 HLA-restricted T cell epitope candidates for epitopebased vaccines. PLoS ONE 5, e8754. doi: 10.1371/journal.pone. 0008754
-
(2010)
PLoS ONE
, vol.5
-
-
Tan, P.T.1
Heiny, A.T.2
Miotto, O.3
Salmon, J.4
Marques, E.T.5
Lemonnier, F.6
August, J.T.7
-
48
-
-
75549084463
-
The immune epitope database 2.0
-
Vita, R., Zarebski, L., Greenbaum, J. A., Emami, H., Hoof, I., Salimi, N., Damle, R., Sette, A., and Peters, B. (2010). The immune epitope database 2.0. Nucleic Acids Res. 38, D854-D862.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Vita, R.1
Zarebski, L.2
Greenbaum, J.A.3
Emami, H.4
Hoof, I.5
Salimi, N.6
Damle, R.7
Sette, A.8
Peters, B.9
-
49
-
-
58749108321
-
Design, expression, and processing of epitomized hepatitis C virus-encoded CTL epitopes
-
Yerly, D., Heckerman, D., Allen, T., Suscovich, T. J., Jojic, N., Kadie, C., Pichler,W. J., Cerny,A., and Brander, C. (2008). Design, expression, and processing of epitomized hepatitis C virus-encoded CTL epitopes. J. Immunol. 181, 6361-6370.
-
(2008)
J. Immunol.
, vol.181
, pp. 6361-6370
-
-
Yerly, D.1
Heckerman, D.2
Allen, T.3
Suscovich, T.J.4
Jojic, N.5
Kadie, C.6
Pichler, W.J.7
Cerny, A.8
Brander, C.9
-
50
-
-
81255134467
-
MULTIPRED2: A computational system for large-scale identification of peptides predicted to bind to HLA supertypes and alleles
-
Zhang, G. L., Deluca, D. S., Keskin, D. B., Chitkushev, L., Zlateva, T., Lund, O., Reinherz, E. L., and Brusic, V. (2011). MULTIPRED2: A computational system for large-scale identification of peptides predicted to bind to HLA supertypes and alleles. J. Immunol. Methods 374, 53-61.
-
(2011)
J. Immunol. Methods
, vol.374
, pp. 53-61
-
-
Zhang, G.L.1
Deluca, D.S.2
Keskin, D.B.3
Chitkushev, L.4
Zlateva, T.5
Lund, O.6
Reinherz, E.L.7
Brusic, V.8
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