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Volumn 109, Issue 42, 2012, Pages 16847-16851

Rhythmic ring-ring stacking drives the circadian oscillator clockwise

Author keywords

Dynamic allostery; Kinase; Kinetics; NMR; Protein structure

Indexed keywords

CIRCADIAN RHYTHM SIGNALING PROTEIN; KAIA PROTEIN; KAIB PROTEIN; KAIC PROTIEN; UNCLASSIFIED DRUG;

EID: 84867635545     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1211508109     Document Type: Article
Times cited : (94)

References (39)
  • 1
    • 79956300350 scopus 로고    scopus 로고
    • Understanding systems-level properties: Timely stories from the study of clocks
    • Hogenesch JB, Ueda HR (2011) Understanding systems-level properties: Timely stories from the study of clocks. Nat Rev Genet 12:407-416.
    • (2011) Nat Rev Genet , vol.12 , pp. 407-416
    • Hogenesch, J.B.1    Ueda, H.R.2
  • 3
    • 12244296161 scopus 로고    scopus 로고
    • No transcription-translation feedback in circadian rhythm of KaiC phosphorylation
    • DOI 10.1126/science.1102540
    • Tomita J, Nakajima M, Kondo T, Iwasaki H (2005) No transcription- translation feedback in circadian rhythm of KaiC phosphorylation. Science 307:251-254. (Pubitemid 40116239)
    • (2005) Science , vol.307 , Issue.5707 , pp. 251-254
    • Tomita, J.1    Nakajima, M.2    Kondo, T.3    Iwasaki, H.4
  • 5
    • 37549018348 scopus 로고    scopus 로고
    • Ordered phosphorylation governs oscillation of a three-protein circadian clock
    • DOI 10.1126/science.1148596
    • Rust MJ, Markson JS, Lane WS, Fisher DS, O'Shea EK (2007) Ordered phosphorylation governs oscillation of a three-protein circadian clock. Science 318:809-812. (Pubitemid 351411774)
    • (2007) Science , vol.318 , Issue.5851 , pp. 809-812
    • Rust, M.J.1    Markson, J.S.2    Lane, W.S.3    Fisher, D.S.4    O'Shea, E.K.5
  • 6
    • 34548382214 scopus 로고    scopus 로고
    • A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria
    • DOI 10.1038/sj.emboj.7601832, PII 7601832
    • Nishiwaki T, et al. (2007) A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria. EMBO J 26:4029-4037. (Pubitemid 47367500)
    • (2007) EMBO Journal , vol.26 , Issue.17 , pp. 4029-4037
    • Nishiwaki, T.1    Satomi, Y.2    Kitayama, Y.3    Terauchi, K.4    Kiyohara, R.5    Takao, T.6    Kondo, T.7
  • 7
    • 4143103631 scopus 로고    scopus 로고
    • Visualizing a circadian clock protein: Crystal structure of KaiC and functional insights
    • DOI 10.1016/j.molcel.2004.07.013, PII S1097276504004356
    • Pattanayek R, et al. (2004) Visualizing a circadian clock protein: Crystal structure of KaiC and functional insights. Mol Cell 15:375-388. (Pubitemid 39092754)
    • (2004) Molecular Cell , vol.15 , Issue.3 , pp. 375-388
    • Pattanayek, R.1    Wang, J.2    Mori, T.3    Xu, Y.4    Johnson, C.H.5    Egli, M.6
  • 10
    • 51349134181 scopus 로고    scopus 로고
    • The day/night switch in KaiC, a central oscillator component of the circadian clock of cyanobacteria
    • Kim YI, Dong G, Carruthers CW, Jr., Golden SS, LiWang A (2008) The day/night switch in KaiC, a central oscillator component of the circadian clock of cyanobacteria. Proc Natl Acad Sci USA 105:12825-12830.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 12825-12830
    • Kim, Y.I.1    Dong, G.2    Carruthers Jr., C.W.3    Golden, S.S.4    LiWang, A.5
  • 11
    • 3342889359 scopus 로고    scopus 로고
    • Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: Implications for KaiC regulation
    • Vakonakis I, LiWang AC (2004) Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: Implications for KaiC regulation. Proc Natl Acad Sci USA 101:10925-10930.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 10925-10930
    • Vakonakis, I.1    LiWang, A.C.2
  • 12
    • 77957054558 scopus 로고    scopus 로고
    • Intermolecular associations determine the dynamics of the circadian KaiABC oscillator
    • Qin X, et al. (2010) Intermolecular associations determine the dynamics of the circadian KaiABC oscillator. Proc Natl Acad Sci USA 107:14805-14810.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 14805-14810
    • Qin, X.1
  • 13
    • 80051964078 scopus 로고    scopus 로고
    • Combined SAXS/EM based models of the S. elongatus post-translational circadian oscillator and its interactions with the output His-kinase SasA
    • Pattanayek R, et al. (2011) Combined SAXS/EM based models of the S. elongatus post-translational circadian oscillator and its interactions with the output His-kinase SasA. PLoS ONE 6:e23697.
    • (2011) PLoS ONE , vol.6
    • Pattanayek, R.1
  • 14
    • 40849145295 scopus 로고    scopus 로고
    • Assembly and disassembly dynamics of the cyanobacterial periodosome
    • Akiyama S, Nohara A, Ito K, Maeda Y (2008) Assembly and disassembly dynamics of the cyanobacterial periodosome. Mol Cell 29:1-14.
    • (2008) Mol Cell , vol.29 , pp. 1-14
    • Akiyama, S.1    Nohara, A.2    Ito, K.3    Maeda, Y.4
  • 16
    • 76749111535 scopus 로고    scopus 로고
    • Elevated ATPase activity of KaiC applies a circadian checkpoint on cell division in Synechococcus elongatus
    • Dong G, et al. (2010) Elevated ATPase activity of KaiC applies a circadian checkpoint on cell division in Synechococcus elongatus. Cell 140:529-539.
    • (2010) Cell , vol.140 , pp. 529-539
    • Dong, G.1
  • 17
    • 84859922635 scopus 로고    scopus 로고
    • Phase-dependent generation and transmission of time information by the KaiABC circadian clock oscillator through SasA-KaiC interaction in cyanobacteria
    • Valencia S J, et al. (2012) Phase-dependent generation and transmission of time information by the KaiABC circadian clock oscillator through SasA-KaiC interaction in cyanobacteria. Genes Cells 17:398-419.
    • (2012) Genes Cells , vol.17 , pp. 398-419
    • Valencia, S.J.1
  • 18
    • 80052280656 scopus 로고    scopus 로고
    • Flexibility of the C-terminal, or CII, ring of KaiC governs the rhythm of the circadian clock of cyanobacteria
    • Chang YG, Kuo NW, Tseng R, LiWang A (2011) Flexibility of the C-terminal, or CII, ring of KaiC governs the rhythm of the circadian clock of cyanobacteria. Proc Natl Acad Sci USA 108:14431-14436.
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 14431-14436
    • Chang, Y.G.1    Kuo, N.W.2    Tseng, R.3    LiWang, A.4
  • 19
    • 78651453820 scopus 로고    scopus 로고
    • Light-driven changes in energy metabolism directly entrain the cyanobacterial circadian oscillator
    • Rust MJ, Golden SS, O'Shea EK (2011) Light-driven changes in energy metabolism directly entrain the cyanobacterial circadian oscillator. Science 331:220-223.
    • (2011) Science , vol.331 , pp. 220-223
    • Rust, M.J.1    Golden, S.S.2    O'Shea, E.K.3
  • 20
    • 47049084270 scopus 로고    scopus 로고
    • Structural model of the circadian clock KaiB-KaiC complex and mechanism for modulation of KaiC phosphorylation
    • Pattanayek R, et al. (2008) Structural model of the circadian clock KaiB-KaiC complex and mechanism for modulation of KaiC phosphorylation. EMBO J 27:1767-1778.
    • (2008) EMBO J , vol.27 , pp. 1767-1778
    • Pattanayek, R.1
  • 21
    • 78650883333 scopus 로고    scopus 로고
    • Tracking and visualizing the circadian ticking of the cyanobacterial clock protein KaiC in solution
    • Murayama Y, et al. (2011) Tracking and visualizing the circadian ticking of the cyanobacterial clock protein KaiC in solution. EMBO J 30:68-78.
    • (2011) EMBO J , vol.30 , pp. 68-78
    • Murayama, Y.1
  • 22
    • 84865446780 scopus 로고    scopus 로고
    • The roles of the dimeric and tetrameric structures of the clock protein KaiB in the generation of circadian oscillations in cyanobacteria
    • Murakami R, et al. (2012) The roles of the dimeric and tetrameric structures of the clock protein KaiB in the generation of circadian oscillations in cyanobacteria. J Biol Chem 287:29506-29515.
    • (2012) J Biol Chem , vol.287 , pp. 29506-29515
    • Murakami, R.1
  • 24
    • 0037881861 scopus 로고    scopus 로고
    • KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system
    • DOI 10.1093/emboj/cdg212
    • Kitayama Y, Iwasaki H, Nishiwaki T, Kondo T (2003) KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system. EMBO J 22:2127-2134. (Pubitemid 36565537)
    • (2003) EMBO Journal , vol.22 , Issue.9 , pp. 2127-2134
    • Kitayama, Y.1    Iwasaki, H.2    Nishiwaki, T.3    Kondo, T.4
  • 25
    • 79955910554 scopus 로고    scopus 로고
    • Solution NMR spectroscopy of supra-molecular systems, why bother? A methyl-TROSY view
    • Kay LE (2011) Solution NMR spectroscopy of supra-molecular systems, why bother? A methyl-TROSY view. J Magn Reson 210:159-170.
    • (2011) J Magn Reson , vol.210 , pp. 159-170
    • Kay, L.E.1
  • 27
    • 0041930989 scopus 로고    scopus 로고
    • 13C NMR spectroscopy of methyl groups in very high molecular weight proteins and protein complexes
    • DOI 10.1021/ja030153x
    • Tugarinov V, Hwang PM, Ollerenshaw JE, Kay LE (2003) Cross-correlated relaxation enhanced 1H-13C NMR spectroscopy of methyl groups in very high molecular weight proteins and protein complexes. J Am Chem Soc 125:10420-10428. (Pubitemid 37022252)
    • (2003) Journal of the American Chemical Society , vol.125 , Issue.34 , pp. 10420-10428
    • Tugarinov, V.1    Hwang, P.M.2    Ollerenshaw, J.E.3    Kay, L.E.4
  • 29
    • 33747253552 scopus 로고    scopus 로고
    • Hexamerization by the N-terminal domain and intersubunit phosphorylation by the C-terminal domain of cyanobacterial circadian clock protein KaiC
    • Hayashi F, Iwase R, Uzumaki T, Ishiura M (2006) Hexamerization by the N-terminal domain and intersubunit phosphorylation by the C-terminal domain of cyanobacterial circadian clock protein KaiC. Biochem Biophys Res Commun 348:864-872.
    • (2006) Biochem Biophys Res Commun , vol.348 , pp. 864-872
    • Hayashi, F.1    Iwase, R.2    Uzumaki, T.3    Ishiura, M.4
  • 31
    • 33746147001 scopus 로고    scopus 로고
    • Cyanobacterial Circadian Pacemaker: Kai Protein Complex Dynamics in the KaiC Phosphorylation Cycle In Vitro
    • DOI 10.1016/j.molcel.2006.05.039, PII S1097276506003819
    • Kageyama H, et al. (2006) Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro. Mol Cell 23:161-171. (Pubitemid 44081879)
    • (2006) Molecular Cell , vol.23 , Issue.2 , pp. 161-171
    • Kageyama, H.1    Nishiwaki, T.2    Nakajima, M.3    Iwasaki, H.4    Oyama, T.5    Kondo, T.6
  • 33
    • 77951191008 scopus 로고    scopus 로고
    • Direct interaction between KaiA and KaiB revealed by a site-directed spin labeling electron spin resonance analysis
    • Mutoh R, et al. (2010) Direct interaction between KaiA and KaiB revealed by a site-directed spin labeling electron spin resonance analysis. Genes Cells 15:269-280.
    • (2010) Genes Cells , vol.15 , pp. 269-280
    • Mutoh, R.1
  • 34
    • 0033104504 scopus 로고    scopus 로고
    • Physical interactions among circadian clock proteins KaiA, KaiB and KaiC in cyanobacteria
    • Iwasaki H, Taniguchi Y, Ishiura M, Kondo T (1999) Physical interactions among circadian clock proteins KaiA, KaiB and KaiC in cyanobacteria. EMBO J 18:1137-1145. (Pubitemid 29110299)
    • (1999) EMBO Journal , vol.18 , Issue.5 , pp. 1137-1145
    • Iwasaki, H.1    Taniguchi, Y.2    Ishiura, M.3    Kondo, T.4
  • 35
    • 77649268657 scopus 로고    scopus 로고
    • Three major output pathways from the KaiABC-based oscillator cooperate to generate robust circadian kaiBC expression in cyanobacteria
    • Taniguchi Y, Takai N, Katayama M, Kondo T, Oyama T (2010) Three major output pathways from the KaiABC-based oscillator cooperate to generate robust circadian kaiBC expression in cyanobacteria. Proc Natl Acad Sci USA 107:3263-3268.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 3263-3268
    • Taniguchi, Y.1    Takai, N.2    Katayama, M.3    Kondo, T.4    Oyama, T.5
  • 36
    • 0034646509 scopus 로고    scopus 로고
    • A KaiC-interacting sensory histidine kinase, SasA, necessary to sustain robust circadian oscillation in cyanobacteria
    • DOI 10.1016/S0092-8674(00)80832-6
    • Iwasaki H, et al. (2000) A KaiC-interacting sensory histidine kinase, SasA, necessary to sustain robust circadian oscillation in cyanobacteria. Cell 101:223-233. (Pubitemid 32004749)
    • (2000) Cell , vol.101 , Issue.2 , pp. 223-233
    • Iwasaki, H.1    Williams, S.B.2    Kitayama, Y.3    Ishiura, M.4    Golden, S.S.5    Kondo, T.6
  • 38
    • 41149123332 scopus 로고    scopus 로고
    • ATPase activity and its temperature compensation of the cyanobacterial clock protein KaiC
    • DOI 10.1111/j.1365-2443.2008.01174.x
    • Murakami R, et al. (2008) ATPase activity and its temperature compensation of the cyanobacterial clock protein KaiC. Genes Cells 13:387-395. (Pubitemid 351437025)
    • (2008) Genes to Cells , vol.13 , Issue.4 , pp. 387-395
    • Murakami, R.1    Miyake, A.2    Iwase, R.3    Hayashi, F.4    Uzumaki, T.5    Ishiura, M.6
  • 39
    • 0029400480 scopus 로고
    • NMRPipe: A multidimensional spectral processing system based on UNIX pipes
    • Delaglio F, et al. (1995) NMRPipe: A multidimensional spectral processing system based on UNIX pipes. J Biomol NMR 6:277-293.
    • (1995) J Biomol NMR , vol.6 , pp. 277-293
    • Delaglio, F.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.