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Volumn 40, Issue 15, 2012, Pages 7257-7268

Repetitive elements and enforced transcriptional repression co-operate to enhance DNA methylation spreading into a promoter CpG-island

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CANCER CELL; CELL SPREADING; CHROMATIN; COLORECTAL CANCER; CONTROLLED STUDY; CPG ISLAND; DNA METHYLATION; DNA SEQUENCE; GENE REPRESSION; INSULIN LIKE 6 GENE; PDLIM4 GENE; PRIORITY JOURNAL; PROMOTER REGION; TRANSGENE; TUMOR SEEDING; TUMOR SUPPRESSOR GENE;

EID: 84867288158     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gks429     Document Type: Article
Times cited : (25)

References (39)
  • 2
    • 18144415066 scopus 로고    scopus 로고
    • Chromatin inactivation precedes de novo DNA methylation during the progressive epigenetic silencing of the RASSF1A promoter
    • Strunnikova, M., Schagdarsurengin, U., Kehlen, A., Garbe, J. C., Stampfer, M. R. and Dammann, R. (2005) Chromatin inactivation precedes de novo DNA methylation during the progressive epigenetic silencing of the RASSF1A promoter. Mol. Cell. Biol., 25, 3923-3933.
    • (2005) Mol. Cell. Biol. , vol.25 , pp. 3923-3933
    • Strunnikova, M.1    Schagdarsurengin, U.2    Kehlen, A.3    Garbe, J.C.4    Stampfer, M.R.5    Dammann, R.6
  • 5
    • 33751523649 scopus 로고    scopus 로고
    • Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells
    • De La Fuente, R., Baumann, C., Fan, T., Schmidtmann, A., Dobrinski, I. and Muegge, K. (2006) Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells. Nat. Cell Biol., 8, 1448-1454.
    • (2006) Nat. Cell Biol. , vol.8 , pp. 1448-1454
    • De La Fuente, R.1    Baumann, C.2    Fan, T.3    Schmidtmann, A.4    Dobrinski, I.5    Muegge, K.6
  • 6
    • 0042132027 scopus 로고    scopus 로고
    • Establishment and maintenance of genomic methylation patterns in mouse embryonic stem cells by Dnmt3a and Dnmt3b
    • Chen, T., Ueda, Y., Dodge, J. E., Wang, Z. and Li, E. (2003) Establishment and maintenance of genomic methylation patterns in mouse embryonic stem cells by Dnmt3a and Dnmt3b. Mol. Cell. Biol., 23, 5594-5605.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 5594-5605
    • Chen, T.1    Ueda, Y.2    Dodge, J.E.3    Wang, Z.4    Li, E.5
  • 7
    • 4744366752 scopus 로고    scopus 로고
    • The PWWP domain of Dnmt3a and Dnmt3b is required for directing DNA methylation to the major satellite repeats at pericentric heterochromatin
    • Chen, T., Tsujimoto, N. and Li, E. (2004) The PWWP domain of Dnmt3a and Dnmt3b is required for directing DNA methylation to the major satellite repeats at pericentric heterochromatin. Mol. Cell. Biol., 24, 9048-9058.
    • (2004) Mol. Cell. Biol. , vol.24 , pp. 9048-9058
    • Chen, T.1    Tsujimoto, N.2    Li, E.3
  • 8
    • 0037068351 scopus 로고    scopus 로고
    • Gene silencing in mammalian cells and the spread of DNA methylation
    • Turker, M. S. (2002) Gene silencing in mammalian cells and the spread of DNA methylation. Oncogene, 21, 5388-5393.
    • (2002) Oncogene , vol.21 , pp. 5388-5393
    • Turker, M.S.1
  • 9
    • 25844530426 scopus 로고    scopus 로고
    • Epigenetic changes in solid and hematopoietic tumors
    • Toyota, M. and Issa, J.-P. J. (2005) Epigenetic changes in solid and hematopoietic tumors. Semin. Oncol., 32, 521-530.
    • (2005) Semin. Oncol. , vol.32 , pp. 521-530
    • Toyota, M.1    Issa, J.-P.J.2
  • 11
    • 33748805480 scopus 로고    scopus 로고
    • Spreading of silent chromatin: Inaction at a distance
    • Talbert, P. B. and Henikoff, S. (2006) Spreading of silent chromatin: inaction at a distance. Nat. Rev. Genet., 7, 793-803.
    • (2006) Nat. Rev. Genet. , vol.7 , pp. 793-803
    • Talbert, P.B.1    Henikoff, S.2
  • 12
    • 53149107845 scopus 로고    scopus 로고
    • Chromatin insulators: Regulatory mechanisms and epigenetic inheritance
    • Bushey, A. M., Dorman, E. R. and Corces, V. G. (2008) Chromatin insulators: regulatory mechanisms and epigenetic inheritance. Mol. Cell, 32, 1-9.
    • (2008) Mol. Cell , vol.32 , pp. 1-9
    • Bushey, A.M.1    Dorman, E.R.2    Corces, V.G.3
  • 13
    • 0037301560 scopus 로고    scopus 로고
    • Origin of a substantial fraction of human regulatory sequences from transposable elements
    • Jordan, I. K., Rogozin, I. B., Glazko, G. V. and Koonin, E. V. (2003) Origin of a substantial fraction of human regulatory sequences from transposable elements. Trends Genet., 19, 68-72.
    • (2003) Trends Genet. , vol.19 , pp. 68-72
    • Jordan, I.K.1    Rogozin, I.B.2    Glazko, G.V.3    Koonin, E.V.4
  • 14
    • 33947303168 scopus 로고    scopus 로고
    • Transposable elements and the epigenetic regulation of the genome
    • Slotkin, R. K. and Martienssen, R. (2007) Transposable elements and the epigenetic regulation of the genome. Nat. Rev. Genet., 8, 272-285.
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 272-285
    • Slotkin, R.K.1    Martienssen, R.2
  • 15
    • 0032756518 scopus 로고    scopus 로고
    • The establishment and maintenance of DNA methylation patterns in mouse somatic cells
    • Turker, M. S. (1999) The establishment and maintenance of DNA methylation patterns in mouse somatic cells. Semin. Cancer Biol., 9, 329-337.
    • (1999) Semin. Cancer Biol. , vol.9 , pp. 329-337
    • Turker, M.S.1
  • 16
    • 0033579468 scopus 로고    scopus 로고
    • Tandem B1 elements located in a mouse methylation center provide a target for de novo DNA methylation
    • Yates, P. A., Burman, R. W., Mummaneni, P., Krussel, S. and Turker, M. S. (1999) Tandem B1 elements located in a mouse methylation center provide a target for de novo DNA methylation. J. Biol. Chem., 274, 36357-36361.
    • (1999) J. Biol. Chem. , vol.274 , pp. 36357-36361
    • Yates, P.A.1    Burman, R.W.2    Mummaneni, P.3    Krussel, S.4    Turker, M.S.5
  • 17
    • 0027525976 scopus 로고
    • A cis-acting element accounts for a conserved methylation pattern upstream of the mouse adenine phosphoribosyltransferase gene
    • Mummaneni, P., Bishop, P. L. and Turker, M. S. (1993) A cis-acting element accounts for a conserved methylation pattern upstream of the mouse adenine phosphoribosyltransferase gene. J. Biol. Chem., 268, 552-558.
    • (1993) J. Biol. Chem. , vol.268 , pp. 552-558
    • Mummaneni, P.1    Bishop, P.L.2    Turker, M.S.3
  • 19
    • 85047695221 scopus 로고    scopus 로고
    • Hypermethylation trigger of the glutathione-S-transferase gene (GSTP1) in prostate cancer cells
    • Song, J. Z., Stirzaker, C., Harrison, J., Melki, J. R. and Clark, S. J. (2002) Hypermethylation trigger of the glutathione-S-transferase gene (GSTP1) in prostate cancer cells. Oncogene, 21, 1048-1061.
    • (2002) Oncogene , vol.21 , pp. 1048-1061
    • Song, J.Z.1    Stirzaker, C.2    Harrison, J.3    Melki, J.R.4    Clark, S.J.5
  • 20
    • 0038678777 scopus 로고    scopus 로고
    • Sensitive and quantitative universal pyrosequencing methylation analysis of CpG sites
    • Colella, S., Shen, L., Baggerly, K. A., Issa, J. P. and Krahe, R. (2003) Sensitive and quantitative universal pyrosequencing methylation analysis of CpG sites. Biotechniques, 35, 146-150.
    • (2003) Biotechniques , vol.35 , pp. 146-150
    • Colella, S.1    Shen, L.2    Baggerly, K.A.3    Issa, J.P.4    Krahe, R.5
  • 22
    • 62849122233 scopus 로고    scopus 로고
    • Genome-wide hypomethylation in head and neck cancer is more pronounced in HPV-negative tumors and is associated with genomic instability
    • Richards, K. L., Zhang, B., Baggerly, K. A., Colella, S., Lang, J. C., Schuller, D. E. and Krahe, R. (2009) Genome-wide hypomethylation in head and neck cancer is more pronounced in HPV-negative tumors and is associated with genomic instability. PLoS One, 4, e4941.
    • (2009) PLoS One , vol.4
    • Richards, K.L.1    Zhang, B.2    Baggerly, K.A.3    Colella, S.4    Lang, J.C.5    Schuller, D.E.6    Krahe, R.7
  • 23
    • 0034176798 scopus 로고    scopus 로고
    • DNA hypermethylation in tumorigenesis: Epigenetics joins genetics
    • Baylin, S. B. and Herman, J. G. (2000) DNA hypermethylation in tumorigenesis: epigenetics joins genetics. Trends Genet., 16, 168-174.
    • (2000) Trends Genet. , vol.16 , pp. 168-174
    • Baylin, S.B.1    Herman, J.G.2
  • 25
    • 0036274359 scopus 로고    scopus 로고
    • The fundamental role of epigenetic events in cancer
    • Jones, P. A. and Baylin, S. B. (2002) The fundamental role of epigenetic events in cancer. Nat. Rev. Genet., 3, 415-428.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 415-428
    • Jones, P.A.1    Baylin, S.B.2
  • 28
    • 0036144048 scopus 로고    scopus 로고
    • DNA methylation patterns and epigenetic memory
    • Bird, A. (2002) DNA methylation patterns and epigenetic memory. Genes Dev., 16, 6-21.
    • (2002) Genes Dev. , vol.16 , pp. 6-21
    • Bird, A.1
  • 30
    • 77956320061 scopus 로고    scopus 로고
    • Targeting of de novo DNA methylation throughout the Oct-4 gene regulatory region in differentiating embryonic stem cells
    • Athanasiadou, R., de Sousa, D., Myant, K., Merusi, C., Stancheva, I. and Bird, A. (2010) Targeting of de novo DNA methylation throughout the Oct-4 gene regulatory region in differentiating embryonic stem cells. PLoS One, 5, e9937.
    • (2010) PLoS One , vol.5
    • Athanasiadou, R.1    Sousa, D.2    Myant, K.3    Merusi, C.4    Stancheva, I.5    Bird, A.6
  • 31
    • 80054994283 scopus 로고    scopus 로고
    • Identification of genetic elements that autonomously determine DNA methylation states
    • Lienert, F., Wirbelauer, C., Som, I., Dean, A., Mohn, F. and Schubeler, D. (2011) Identification of genetic elements that autonomously determine DNA methylation states. Nat. Genet., 43, 1091-1097.
    • (2011) Nat. Genet. , vol.43 , pp. 1091-1097
    • Lienert, F.1    Wirbelauer, C.2    Som, I.3    Dean, A.4    Mohn, F.5    Schubeler, D.6
  • 32
    • 68049104358 scopus 로고    scopus 로고
    • Aberrant de novo methylation of the p16INK4A CpG island is initiated post gene silencing in association with chromatin remodelling and mimics nucleosome positioning
    • Hinshelwood, R. A., Melki, J. R., Huschtscha, L. I., Paul, C., Song, J. Z., Stirzaker, C., Reddel, R. R. and Clark, S. J. (2009) Aberrant de novo methylation of the p16INK4A CpG island is initiated post gene silencing in association with chromatin remodelling and mimics nucleosome positioning. Hum. Mol. Genet., 18, 3098-3109.
    • (2009) Hum. Mol. Genet. , vol.18 , pp. 3098-3109
    • Hinshelwood, R.A.1    Melki, J.R.2    Huschtscha, L.I.3    Paul, C.4    Song, J.Z.5    Stirzaker, C.6    Reddel, R.R.7    Clark, S.J.8
  • 33
    • 3042701155 scopus 로고    scopus 로고
    • Epigenomics: Beyond CpG islands
    • Fazzari, M. J. and Greally, J. M. (2004) Epigenomics: beyond CpG islands. Nat. Rev. Genet., 5, 446-455.
    • (2004) Nat. Rev. Genet. , vol.5 , pp. 446-455
    • Fazzari, M.J.1    Greally, J.M.2
  • 34
    • 42349096534 scopus 로고    scopus 로고
    • Transposable elements and the evolution of regulatory networks
    • Feschotte, C. (2008) Transposable elements and the evolution of regulatory networks. Nat. Rev. Genet., 9, 397-405.
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 397-405
    • Feschotte, C.1
  • 37
    • 0041624239 scopus 로고    scopus 로고
    • Regulated recruitment of HP1 to a euchromatic gene induces mitotically heritable, epigenetic gene silencing: A mammalian cell culture model of gene variegation
    • Ayyanathan, K., Lechner, M. S., Bell, P., Maul, G. G., Schultz, D. C., Yamada, Y., Tanaka, K., Torigoe, K. and Rauscher, F. J. (2003) Regulated recruitment of HP1 to a euchromatic gene induces mitotically heritable, epigenetic gene silencing: a mammalian cell culture model of gene variegation. Genes Dev., 17, 1855-1869.
    • (2003) Genes Dev. , vol.17 , pp. 1855-1869
    • Ayyanathan, K.1    Lechner, M.S.2    Bell, P.3    Maul, G.G.4    Schultz, D.C.5    Yamada, Y.6    Tanaka, K.7    Torigoe, K.8    Rauscher, F.J.9
  • 38
    • 0042626332 scopus 로고    scopus 로고
    • Heterochromatin: Stable and unstable invasions at home and abroad
    • Fahrner, J. A. and Baylin, S. B. (2003) Heterochromatin: stable and unstable invasions at home and abroad. Genes Dev., 17, 1805-1812.
    • (2003) Genes Dev. , vol.17 , pp. 1805-1812
    • Fahrner, J.A.1    Baylin, S.B.2
  • 39
    • 77649271805 scopus 로고    scopus 로고
    • Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity
    • Coolen, M. W., Stirzaker, C., Song, J. Z., Statham, A. L., Kassir, Z., Moreno, C. S., Young, A. N., Varma, V., Speed, T. P., Cowley, M. et al. (2010) Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity. Nat. Cell Biol., 12, 235-246.
    • (2010) Nat. Cell Biol. , vol.12 , pp. 235-246
    • Coolen, M.W.1    Stirzaker, C.2    Song, J.Z.3    Statham, A.L.4    Kassir, Z.5    Moreno, C.S.6    Young, A.N.7    Varma, V.8    Speed, T.P.9    Cowley, M.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.