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Volumn 2, Issue 5, 2007, Pages

LINE-1 hypomethylation in cancer is highly variable and inversely correlated with microsatellite instability

Author keywords

[No Author keywords available]

Indexed keywords

BISULFITE; REPETITIVE DNA; MICROSATELLITE DNA; PRIMER DNA;

EID: 36849059066     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0000399     Document Type: Article
Times cited : (228)

References (30)
  • 1
    • 0019484064 scopus 로고
    • DNA methylase activity of normal liver, regenerating liver, and a transplantable hepatocellular carcinoma
    • Walker MS,Becker FF (1981) DNA methylase activity of normal liver, regenerating liver, and a transplantable hepatocellular carcinoma. Cancer Biochem Biophys 1981; 5: 169-173.
    • (1981) Cancer Biochem Biophys 1981 , vol.5 , pp. 169-173
    • Walker, M.S.1    Becker, F.F.2
  • 2
    • 0020699979 scopus 로고
    • Hypomethylation distinguishes genes of some human cancers from their normal counterparts
    • Feinberg AP, Vogelstein B (1983) Hypomethylation distinguishes genes of some human cancers from their normal counterparts. Nature 301: 89-92.
    • (1983) Nature , vol.301 , pp. 89-92
    • Feinberg, A.P.1    Vogelstein, B.2
  • 4
    • 0020552634 scopus 로고
    • DNA hypomethylation in Morris hepatomas
    • Lu LJ, Randerath E, Randerath K (1983) DNA hypomethylation in Morris hepatomas. Cancer Lett 19: 231-239.
    • (1983) Cancer Lett , vol.19 , pp. 231-239
    • Lu, L.J.1    Randerath, E.2    Randerath, K.3
  • 5
    • 0022495317 scopus 로고
    • DNA methylation patterns of the calcitonin gene in human lung cancers and lymphomas
    • Baylin SB, Hoppener JW, de Bustros A, Steenbergh PH, Lips CJ, et al. (1986) DNA methylation patterns of the calcitonin gene in human lung cancers and lymphomas. Cancer Res 46: 2917-2922.
    • (1986) Cancer Res , vol.46 , pp. 2917-2922
    • Baylin, S.B.1    Hoppener, J.W.2    de Bustros, A.3    Steenbergh, P.H.4    Lips, C.J.5
  • 6
    • 0023270085 scopus 로고
    • Hypermethylation of the 5′ region of the calcitonin gene is a property of human lymphoid and acute myeloid malignancies
    • Baylin SB, Fearon ER, Vogelstein B, de Bustros A, Sharkis SJ, et al. (1987) Hypermethylation of the 5′ region of the calcitonin gene is a property of human lymphoid and acute myeloid malignancies. Blood 70: 412-417.
    • (1987) Blood , vol.70 , pp. 412-417
    • Baylin, S.B.1    Fearon, E.R.2    Vogelstein, B.3    de Bustros, A.4    Sharkis, S.J.5
  • 8
    • 0034077361 scopus 로고    scopus 로고
    • Genetic and epigenetic alterations in carcinogenesis
    • Sugimura T, Ushijima T (2000) Genetic and epigenetic alterations in carcinogenesis. Mutat Res 462: 235-246.
    • (2000) Mutat Res , vol.462 , pp. 235-246
    • Sugimura, T.1    Ushijima, T.2
  • 9
    • 25844530426 scopus 로고    scopus 로고
    • Epigenetic changes in solid and hematopoietic tumors
    • Toyota M, Issa JP (2005) Epigenetic changes in solid and hematopoietic tumors. Semin Oncol 32: 521-530.
    • (2005) Semin Oncol , vol.32 , pp. 521-530
    • Toyota, M.1    Issa, J.P.2
  • 10
    • 0028001087 scopus 로고
    • Methylation of the oestrogen receptor CpG island links ageing and neoplasia in human colon
    • Issa JP, Ottaviano YL, Celano P, Hamilton SR, Davidson NE, et al. (1994) Methylation of the oestrogen receptor CpG island links ageing and neoplasia in human colon. Nat Genet 7: 536-540.
    • (1994) Nat Genet , vol.7 , pp. 536-540
    • Issa, J.P.1    Ottaviano, Y.L.2    Celano, P.3    Hamilton, S.R.4    Davidson, N.E.5
  • 11
    • 33644825262 scopus 로고    scopus 로고
    • Global DNA demethylation in gastrointestinal cancer is age dependent and precedes genomic damage
    • Suzuki K, Suzuki I, Leodolter A, Alonso S, Horiuchi S, et al. (2006) Global DNA demethylation in gastrointestinal cancer is age dependent and precedes genomic damage. Cancer Cell 9: 199-207.
    • (2006) Cancer Cell , vol.9 , pp. 199-207
    • Suzuki, K.1    Suzuki, I.2    Leodolter, A.3    Alonso, S.4    Horiuchi, S.5
  • 12
    • 0031050736 scopus 로고    scopus 로고
    • Identification and characterization of differentially methylated regions of genomic DNA by methylation-sensitive arbitrarily primed PCR
    • Gonzalgo ML, Liang G, Spruck CH 3rd, Zingg JM, Rideout WM 3rd, et al. (1997) Identification and characterization of differentially methylated regions of genomic DNA by methylation-sensitive arbitrarily primed PCR. Cancer Res 57: 594-599.
    • (1997) Cancer Res , vol.57 , pp. 594-599
    • Gonzalgo, M.L.1    Liang, G.2    Spruck 3rd, C.H.3    Zingg, J.M.4    Rideout 3rd, W.M.5
  • 13
    • 0037068375 scopus 로고    scopus 로고
    • The study of aberrant methylation in cancer via restriction landmark genomic scanning
    • Smiraglia DJ, Plass C (2000) The study of aberrant methylation in cancer via restriction landmark genomic scanning. Oncogene 21: 5414-5426.
    • (2000) Oncogene , vol.21 , pp. 5414-5426
    • Smiraglia, D.J.1    Plass, C.2
  • 14
    • 33646551521 scopus 로고    scopus 로고
    • Microarray-based survey of CpG islands identifies concurrent hyper-and hypomethylation patterns in tissues derived from patients with breast cancer
    • Piotrowski A, Benetkiewicz M, Menzel U, de Stahl TD, Mantripragada K, et al. (2006) Microarray-based survey of CpG islands identifies concurrent hyper-and hypomethylation patterns in tissues derived from patients with breast cancer. Genes Chromosomes Cancer 45: 656-667.
    • (2006) Genes Chromosomes Cancer , vol.45 , pp. 656-667
    • Piotrowski, A.1    Benetkiewicz, M.2    Menzel, U.3    de Stahl, T.D.4    Mantripragada, K.5
  • 15
    • 29344455676 scopus 로고    scopus 로고
    • The relationship between global methylation level, loss of heterozygosity, and microsatellite instability in sporadic colorectal cancer
    • Matsuzaki K, Deng G, Tanaka H, Kakar S, Miura S, et al. (2003) The relationship between global methylation level, loss of heterozygosity, and microsatellite instability in sporadic colorectal cancer. Clin Cancer Res 11: 8564-8569.
    • (2003) Clin Cancer Res , vol.11 , pp. 8564-8569
    • Matsuzaki, K.1    Deng, G.2    Tanaka, H.3    Kakar, S.4    Miura, S.5
  • 16
    • 33646419009 scopus 로고    scopus 로고
    • Regional hypermethylation and global hypomethylation are associated with altered chromatin conformation and histone acetylation in colorectal cancer
    • Deng G, Nguyen A, Tanaka H, Matsuzaki K, Bell I, et al. (2006) Regional hypermethylation and global hypomethylation are associated with altered chromatin conformation and histone acetylation in colorectal cancer. Int J Cancer 118: 2999-3005.
    • (2006) Int J Cancer , vol.118 , pp. 2999-3005
    • Deng, G.1    Nguyen, A.2    Tanaka, H.3    Matsuzaki, K.4    Bell, I.5
  • 17
    • 12744271900 scopus 로고    scopus 로고
    • Differential DNA hypermethylation and hypomethylation signatures in colorectal cancer
    • Frigola J, Sole X, Paz MF, Moreno V, Esteller M, et al. (2005) Differential DNA hypermethylation and hypomethylation signatures in colorectal cancer. Hum Mol Genet 14: 319-326.
    • (2005) Hum Mol Genet , vol.14 , pp. 319-326
    • Frigola, J.1    Sole, X.2    Paz, M.F.3    Moreno, V.4    Esteller, M.5
  • 18
    • 33646338637 scopus 로고    scopus 로고
    • Quantitative analysis of associations between DNA hypermethylation, hypomethylation, and DNMT RNA levels in ovarian tumors
    • Ehrlich M, Woods CB, Yu MC, Dubeau L, Yang F, et al. (2006) Quantitative analysis of associations between DNA hypermethylation, hypomethylation, and DNMT RNA levels in ovarian tumors. Oncogene 25: 2636-2645.
    • (2006) Oncogene , vol.25 , pp. 2636-2645
    • Ehrlich, M.1    Woods, C.B.2    Yu, M.C.3    Dubeau, L.4    Yang, F.5
  • 19
    • 0034681117 scopus 로고    scopus 로고
    • Distinct genetic profiles in colorectal tumors with or without the CpG island methylator phenotype
    • Toyota M, Ohe-Toyota M, Ahuja N, Issa JP (2000) Distinct genetic profiles in colorectal tumors with or without the CpG island methylator phenotype. Proc. Natl. Acad. Sci. USA 97: 710-715.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 710-715
    • Toyota, M.1    Ohe-Toyota, M.2    Ahuja, N.3    Issa, J.P.4
  • 20
    • 0033563165 scopus 로고    scopus 로고
    • Identification of differentially methylated sequences in colorectal cancer by methylated CpG island amplification
    • Toyota M, Ho C, Ahuja N, Jair KW, Li Q, et al. (1999) Identification of differentially methylated sequences in colorectal cancer by methylated CpG island amplification. Cancer Res 59: 2307-2312.
    • (1999) Cancer Res , vol.59 , pp. 2307-2312
    • Toyota, M.1    Ho, C.2    Ahuja, N.3    Jair, K.W.4    Li, Q.5
  • 21
    • 33744918070 scopus 로고    scopus 로고
    • DNA methylation changes after 5-aza-2′-deoxycytidine therapy in patients with leukemia
    • Yang AS, Doshi KD, Choi SW, Mason JB, Mannari RK, et al. (2006) DNA methylation changes after 5-aza-2′-deoxycytidine therapy in patients with leukemia. Cancer Res 66: 5495-5503.
    • (2006) Cancer Res , vol.66 , pp. 5495-5503
    • Yang, A.S.1    Doshi, K.D.2    Choi, S.W.3    Mason, J.B.4    Mannari, R.K.5
  • 22
    • 2342557977 scopus 로고    scopus 로고
    • A simple method for estimating global DNA methylation using bisulfite PCR of repetitive DNA elements
    • Yang AS, Estecio MR, Doshi K, Kondo Y, Tajara EH, et al. (2004) A simple method for estimating global DNA methylation using bisulfite PCR of repetitive DNA elements. Nucleic Acids Res. 32: e38.
    • (2004) Nucleic Acids Res , vol.32
    • Yang, A.S.1    Estecio, M.R.2    Doshi, K.3    Kondo, Y.4    Tajara, E.H.5
  • 23
    • 0036274359 scopus 로고    scopus 로고
    • The fundamental role of epigenetic events in cancer
    • Jones PA, Baylin SB (2002) The fundamental role of epigenetic events in cancer. Nat Rev Genet 3: 415-28.
    • (2002) Nat Rev Genet , vol.3 , pp. 415-428
    • Jones, P.A.1    Baylin, S.B.2
  • 24
    • 10344260184 scopus 로고    scopus 로고
    • CpG island methylator phenotype in cancer
    • Issa JP (2004) CpG island methylator phenotype in cancer. Nat Rev Cancer 12: 988-993.
    • (2004) Nat Rev Cancer , vol.12 , pp. 988-993
    • Issa, J.P.1
  • 26
    • 9944233064 scopus 로고    scopus 로고
    • Distinctive pattern of LINE-1 methylation level in normal tissues and the association with carcinogenesis
    • Chalitchagorn K, Shuangshoti S, Hourpai N, Kongruttanachok N, Tangkijvanich P, et al. (2004) Distinctive pattern of LINE-1 methylation level in normal tissues and the association with carcinogenesis. Oncogene 23: 8841-8846.
    • (2004) Oncogene , vol.23 , pp. 8841-8846
    • Chalitchagorn, K.1    Shuangshoti, S.2    Hourpai, N.3    Kongruttanachok, N.4    Tangkijvanich, P.5
  • 27
    • 0032987773 scopus 로고    scopus 로고
    • DNA methylation and expression of LINE-1 and HERV-K provirus sequences in urothelial and renal cell carcinomas
    • Florl AR, Lower R, Schmitz-Drager BJ, Schulz WA (1999) DNA methylation and expression of LINE-1 and HERV-K provirus sequences in urothelial and renal cell carcinomas. Br J Cancer 80: 1312-1321.
    • (1999) Br J Cancer , vol.80 , pp. 1312-1321
    • Florl, A.R.1    Lower, R.2    Schmitz-Drager, B.J.3    Schulz, W.A.4
  • 30
    • 0035890090 scopus 로고    scopus 로고
    • Lsh, a member of the SNF2 family, is required for genome-wide methylation
    • Dennis K, Fan T, Geiman T, Yan Q, Muegge K (2001) Lsh, a member of the SNF2 family, is required for genome-wide methylation. Genes Dev 15: 2940-2944.
    • (2001) Genes Dev , vol.15 , pp. 2940-2944
    • Dennis, K.1    Fan, T.2    Geiman, T.3    Yan, Q.4    Muegge, K.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.