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Volumn 57, Issue 6, 2012, Pages 1619-1633

Frustule-related gene transcription and the influence of diatom community composition on silica precipitation in an iron-limited environment

Author keywords

[No Author keywords available]

Indexed keywords

ALGAL BLOOM; COMMUNITY COMPOSITION; DIATOM; IRON; MARINE ECOSYSTEM; MICROCOSM; PRECIPITATION (CHEMISTRY); SILICA;

EID: 84867240923     PISSN: 00243590     EISSN: None     Source Type: Journal    
DOI: 10.4319/lo.2012.57.6.1619     Document Type: Article
Times cited : (36)

References (55)
  • 1
    • 48749127648 scopus 로고    scopus 로고
    • Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation
    • doi:10.1073/pnas.0711370105
    • Allen, A. E., et al. 2008. Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation. Proc. Natl. Acad. Sci. USA 105: 10438-10443. doi:10.1073/pnas.0711370105
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 10438-10443
    • Allen, A.E.1
  • 3
    • 34547179263 scopus 로고    scopus 로고
    • Strong purifying selection in the silicon transporters of marine and freshwater diatoms
    • doi:10.4319/lo.2007.52.4.1420
    • Alverson, A. J. 2007. Strong purifying selection in the silicon transporters of marine and freshwater diatoms. Limnol. Oceanogr. 52: 1420-1429. doi:10.4319/lo.2007.52.4.1420
    • (2007) Limnol Oceanogr , vol.52 , pp. 1420-1429
    • Alverson, A.J.1
  • 5
    • 80052187376 scopus 로고    scopus 로고
    • Molecular machines encoded by bacterially- derived multi-domain gene fusions that potentially synthesize, N-methylate and transfer long chain polyamines in diatoms
    • doi:10.1016/j.febslet.2011.07.038
    • Anthony, M. 2011. Molecular machines encoded by bacterially- derived multi-domain gene fusions that potentially synthesize, N-methylate and transfer long chain polyamines in diatoms. FEBS Lett. 585: 2627-2634. doi:10.1016/j.febslet.2011.07.038
    • (2011) FEBS Lett , vol.585 , pp. 2627-2634
    • Anthony, M.1
  • 6
    • 78650869971 scopus 로고    scopus 로고
    • Causes and biogeochemical implications of regional differences in silicification of marine diatoms
    • doi:10.1029/2010GB003856
    • Baines, S. B., B. S. Twining, M. A. Brzezinski, D. M. Nelson, N. S. Fisher. 2010. Causes and biogeochemical implications of regional differences in silicification of marine diatoms. Glob. Biogeochem. Cycles 24: GB4031. doi:10.1029/2010GB003856
    • (2010) Glob. Biogeochem. Cycles , vol.24
    • Baines, S.B.1    Twining, B.S.2    Brzezinski, M.A.3    Nelson, D.M.4    Fisher, N.S.5
  • 7
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini, Y., Y. Hochberg. 1995. Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. Roy. Statist. Soc. Ser. B 57: 289-300.
    • (1995) J. Roy. Statist. Soc. Ser. B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 8
    • 0035682886 scopus 로고    scopus 로고
    • Evolution of an artificial seawater medium: Improvements in enriched seawater, artificial water over the last two decades
    • doi:10.1046/j.1529-8817.2001.01052.x
    • Berges, J. A., D. J. Franklin, P. J. Harrison. 2001. Evolution of an artificial seawater medium: Improvements in enriched seawater, artificial water over the last two decades. J. Phycol. 37: 1138-1145. doi:10.1046/j.1529-8817.2001.01052.x
    • (2001) J. Phycol , vol.37 , pp. 1138-1145
    • Berges, J.A.1    Franklin, D.J.2    Harrison, P.J.3
  • 9
    • 56249098614 scopus 로고    scopus 로고
    • The Phaeodactylum genome reveals the evolutionary history of diatom genomes
    • doi:10.1038/nature07410
    • Bowler, C. 2008. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature 456: 239-244. doi:10.1038/nature07410
    • (2008) Nature , vol.456 , pp. 239-244
    • Bowler, C.1
  • 10
    • 28044451539 scopus 로고    scopus 로고
    • The evolution and termination of an iron-induced mesoscale bloom in the northeast subarctic Pacific
    • doi:10.4319/ lo.2005.50.6.1872
    • Boyd, P. W. 2005. The evolution and termination of an iron-induced mesoscale bloom in the northeast subarctic Pacific. Limnol. Oceanogr. 50: 1872-1886. doi:10.4319/ lo.2005.50.6.1872
    • (2005) Limnol. Oceanogr , vol.50 , pp. 1872-1886
    • Boyd, P.W.1
  • 11
    • 77956984344 scopus 로고
    • A method for the rapid and precise determination of acclimated phytoplankton reproduction rates
    • doi:10.1093/plankt/3.2.193
    • Brand, L. E., R. R. L. Guillard, L. S. Murphy. 1981. A method for the rapid and precise determination of acclimated phytoplankton reproduction rates. J. Plankton Res. 3: 193-201. doi:10.1093/plankt/3.2.193
    • (1981) J. Plankton Res , vol.3 , pp. 193-201
    • Brand, L.E.1    Guillard, R.R.L.2    Murphy, L.S.3
  • 12
    • 71949128256 scopus 로고    scopus 로고
    • Chitin-based organic networks: An integral part of cell wall biosilica in the diatom Thalassiosira pseudonana
    • doi:10.1002/anie.200905028
    • Brunner, E., P. Richthammer, H. Ehrlich, S. Paasch, P. Simon, S. Ueberlein, K. H. van Pée. 2009. Chitin-based organic networks: An integral part of cell wall biosilica in the diatom Thalassiosira pseudonana. Angew. Chem. Int. Ed. 48: 9724-9727. doi:10.1002/anie.200905028
    • (2009) Angew. Chem. Int. Ed , vol.48 , pp. 9724-9727
    • Brunner, E.1    Richthammer, P.2    Ehrlich, H.3    Paasch, S.4    Simon, P.5    Ueberlein, S.6    van Pée, K.H.7
  • 13
    • 44949224329 scopus 로고    scopus 로고
    • Iron and silicic acid concentrations together regulate Si uptake in the equatorial Pacific Ocean
    • doi:10.4319/lo.2008.53.3.0875
    • Brzezinski, M. A., C. Dumousseaud, J. W. Krause, C. I. Measures, D. M. Nelson. 2008. Iron and silicic acid concentrations together regulate Si uptake in the equatorial Pacific Ocean. Limnol. Oceanogr. 53: 875-889. doi:10.4319/lo.2008.53.3.0875
    • (2008) Limnol. Oceanogr , vol.53 , pp. 875-889
    • Brzezinski, M.A.1    Dumousseaud, C.2    Krause, J.W.3    Measures, C.I.4    Nelson, D.M.5
  • 14
    • 20044369708 scopus 로고    scopus 로고
    • Control of silica production by iron and silicic acid during the Southern Ocean Iron Experiment (SOFeX)
    • doi:10.4319/lo.2005.50.3.0810
    • Brzezinski, M. A., C. Dumousseaud, J. W. Krause, C. I. Measures, D. M. Nelson, J. L. JONES, M. S. demarest. 2005. Control of silica production by iron and silicic acid during the Southern Ocean Iron Experiment (SOFeX). Limnol. Oceanogr. 50: 810-824. doi:10.4319/lo.2005.50.3.0810
    • (2005) Limnol. Oceanogr , vol.50 , pp. 810-824
    • Brzezinski, M.A.1    Dumousseaud, C.2    Krause, J.W.3    Measures, C.I.4    Nelson, J.L.5    Jones, D.M.6    Demarest, M.S.7
  • 16
    • 0031669318 scopus 로고    scopus 로고
    • The decoupling of production and particulate export in the surface ocean
    • doi:10.1029/97GB03366
    • Buesseler, K. O. 1998. The decoupling of production and particulate export in the surface ocean. Glob. Biogeochem. Cycles 12: 297-310. doi:10.1029/97GB03366
    • (1998) Glob. Biogeochem. Cycles , vol.12 , pp. 297-310
    • Buesseler, K.O.1
  • 17
    • 27744513188 scopus 로고    scopus 로고
    • Synthesis of iron fertilization experiments: From the iron age in the age of enlightenment
    • doi: 10.1029/2004JC002601
    • De Baar, H. J. W. 2005. Synthesis of iron fertilization experiments: From the iron age in the age of enlightenment. J. Geophys. Res. Oceans 110: C09S16. doi:10.1029/2004JC002601
    • (2005) J. Geophys. Res. Oceans , vol.110
    • de Baar, H.J.W.1
  • 18
    • 0034737344 scopus 로고    scopus 로고
    • Effects of iron and zinc deficiency on elemental composition and silica production by diatoms
    • doi: 10.3354/meps195071
    • De La Rocha, C. L., D. A. Hutchins, M. A. Brzezinski, Y. Zhang. 2000. Effects of iron and zinc deficiency on elemental composition and silica production by diatoms. Mar. Ecol. Prog. Ser. 195: 71-79. doi:10.3354/meps195071
    • (2000) Mar. Ecol. Prog. Ser , vol.195 , pp. 71-79
    • De la Rocha, C.L.1    Hutchins, D.A.2    Brzezinski, M.A.3    Zhang, Y.4
  • 19
    • 67650457079 scopus 로고    scopus 로고
    • Chitin in diatoms and its association with the cell wall
    • doi:10.1128/EC.00079-09
    • Durkin, C. A., T. Mock, E. V. Armbrust. 2009. Chitin in diatoms and its association with the cell wall. Eukaryot. Cell 8: 1038-1050. doi:10.1128/EC.00079-09
    • (2009) Eukaryot. Cell , vol.8 , pp. 1038-1050
    • Durkin, C.A.1    Mock, T.2    Armbrust, E.V.3
  • 20
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • doi:10.1093/nar/gkh340
    • Edgar, R. C. 2004. MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32: 1792-1797. doi:10.1093/nar/gkh340
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 21
    • 0032503986 scopus 로고    scopus 로고
    • Primary production of the biosphere: Integrating terrestrial and oceanic components
    • doi:10.1126/science.281.5374.237
    • Field, C. B., M. J. Behrenfeld, J. T. Randerson, P. Falkowski. 1998. Primary production of the biosphere: Integrating terrestrial and oceanic components. Science 281: 237-240. doi:10.1126/science.281.5374.237
    • (1998) Science , vol.281 , pp. 237-240
    • Field, C.B.1    Behrenfeld, M.J.2    Randerson, J.T.3    Falkowski, P.4
  • 22
    • 31644445185 scopus 로고    scopus 로고
    • Identification of proteins from a cell wall fraction of the diatom Thalassiosira pseudonana
    • Frigeri, L. G., T. R. Radabaugh, P. A. Haynes, M. Hildebrand. 2006. Identification of proteins from a cell wall fraction of the diatom Thalassiosira pseudonana. Mol. Cell. Proteomics 5: 182-193.
    • (2006) Mol. Cell. Proteomics , vol.5 , pp. 182-193
    • Frigeri, L.G.1    Radabaugh, T.R.2    Haynes, P.A.3    Hildebrand, M.4
  • 23
    • 73049174685 scopus 로고
    • Studies of marine planktonic diatoms.1. Cyclotella nana Hustedt, and Detonula confervacea (Cleve) Gran
    • doi:10.1139/m62-029
    • Guillard, R. R., J. H. Ryther. 1962. Studies of marine planktonic diatoms.1. Cyclotella nana Hustedt, and Detonula confervacea (Cleve) Gran. Can. J. Microbiol. 8: 229-239. doi:10.1139/m62-029
    • (1962) Can. J. Microbiol , vol.8 , pp. 229-239
    • Guillard, R.R.1    Ryther, J.H.2
  • 24
    • 0032413138 scopus 로고    scopus 로고
    • Characterization of a silicon transporter gene family in Cylindrotheca fusiformis: Sequences, expression analysis, and identification of homologs in other diatoms
    • doi:10.1007/s004380050920
    • Hildebrand, M., K. Dahlin, B. E. Volcani. 1998. Characterization of a silicon transporter gene family in Cylindrotheca fusiformis: Sequences, expression analysis, and identification of homologs in other diatoms. Mol. Gen. Genet. 260: 480-486. doi:10.1007/s004380050920
    • (1998) Mol. Gen. Genet , vol.260 , pp. 480-486
    • Hildebrand, M.1    Dahlin, K.2    Volcani, B.E.3
  • 25
    • 0032508109 scopus 로고    scopus 로고
    • Iron-limited diatom growth and Si: N Uptake Ratios In a Coastal Upwelling Regime
    • doi:10.1038/31203
    • hutchins, D. A., K. W. Bruland. 1998. Iron-limited diatom growth and Si: N uptake ratios in a coastal upwelling regime. Nature 393: 561-564. doi:10.1038/31203
    • (1998) Nature , vol.393 , pp. 561-564
    • Hutchins, D.A.1    Bruland, K.W.2
  • 26
    • 32944472945 scopus 로고    scopus 로고
    • Aminopro-pyltransferases: Function, structure and genetics
    • doi:10.1093/jb/mvj019
    • Ikeguchi, Y., M. C. Bewley, A. E. Pegg. 2006. Aminopro- pyltransferases: Function, structure and genetics. J. Biochem. 139: 1-9. doi:10.1093/jb/mvj019
    • (2006) J. Biochem , vol.139 , pp. 1-9
    • Ikeguchi, Y.1    Bewley, M.C.2    Pegg, A.E.3
  • 27
    • 70350329368 scopus 로고    scopus 로고
    • Biosynthesis of long-chain polyamines by crenarchaeal polyamine synthases from Hyperthermus butylicus and Pyrobaculum aerophilum
    • doi:10.1016/j.febslet.2009.10.014
    • Knott, J. M. 2009. Biosynthesis of long-chain polyamines by crenarchaeal polyamine synthases from Hyperthermus butylicus and Pyrobaculum aerophilum. FEBS Lett. 583: 3519-3524. doi:10.1016/j.febslet.2009.10.014
    • (2009) FEBS Lett , vol.583 , pp. 3519-3524
    • Knott, J.M.1
  • 28
    • 34250171745 scopus 로고    scopus 로고
    • Putative spermine synthases from Thalassiosira pseudonana and Arabidopsis thaliana synthesize thermospermine rather than spermine
    • doi:10.1016/j.febslet.2007.05.074
    • Knott, J. M, P. Romer, M. Sumper. 2007. Putative spermine synthases from Thalassiosira pseudonana and Arabidopsis thaliana synthesize thermospermine rather than spermine. FEBS Lett. 581: 3081-3086. doi:10.1016/j.febslet.2007.05.074
    • (2007) FEBS Lett , vol.581 , pp. 3081-3086
    • Knott, J.M.1    Romer, P.2    Sumper, M.3
  • 29
    • 0030341926 scopus 로고    scopus 로고
    • Evolution of the diatoms (Bacillariophyta): IV. A reconstruction of their age from small subunit rRNA coding regions and the fossil record
    • doi:10.1006/mpev.1996.0088
    • Kooistra, W. H. C. F., L. K. Medlin. 1996. Evolution of the diatoms (Bacillariophyta): IV. A reconstruction of their age from small subunit rRNA coding regions and the fossil record. Mol. Phylogenet. Evol. 6: 391-407. doi:10.1006/mpev.1996.0088
    • (1996) Mol. Phylogenet. Evol , vol.6 , pp. 391-407
    • Kooistra, W.H.C.F.1    Medlin, L.K.2
  • 30
    • 78649562385 scopus 로고    scopus 로고
    • The effects of biogenic silica detritus, zooplankton grazing, and diatom size structure on silicon cycling in the euphotic zone of the eastern equatorial Pacific
    • doi:10.4319/lo.2010.55.6.2608
    • Krause, J. W. 2010. The effects of biogenic silica detritus, zooplankton grazing, and diatom size structure on silicon cycling in the euphotic zone of the eastern equatorial Pacific. Limnol. Oceanogr. 55: 2608-2622. doi:10.4319/lo.2010.55.6.2608
    • (2010) Limnol. Oceanogr , vol.55 , pp. 2608-2622
    • Krause, J.W.1
  • 31
    • 0034687727 scopus 로고    scopus 로고
    • Species-specific polyamines from diatoms control silica morphology
    • doi:10.1073/pnas.260496497
    • Kroger, N., R. Deutzmann, C. Bergsdorf, M. Sumper. 2000. Species-specific polyamines from diatoms control silica morphology. Proc. Natl. Acad. Sci. USA 97: 14133-14138. doi:10.1073/pnas.260496497
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 14133-14138
    • Kroger, N.1    Deutzmann, R.2    Bergsdorf, C.3    Sumper, M.4
  • 32
    • 0037814710 scopus 로고    scopus 로고
    • Polycationic peptides from diatom biosilica that direct silica nanosphere formation
    • doi:10.1126/science.286.5442.1129
    • Kroger, N., R. Deutzmann, C. Bergsdorf, AND M. Sumper. 1999. Polycationic peptides from diatom biosilica that direct silica nanosphere formation. Science 286: 1129-1132. doi:10.1126/science.286.5442.1129
    • (1999) Science , vol.286 , pp. 1129-1132
    • Kroger, N.1    Deutzmann, R.2    Bergsdorf, C.3    Sumper, M.4
  • 33
    • 33646559878 scopus 로고    scopus 로고
    • New applications of a biogenic silica deposition fluorophore in the study of oceanic diatoms
    • doi:10.4319/lom.2005.3.462
    • Leblanc, K., D. A. Hutchins. 2005. New applications of a biogenic silica deposition fluorophore in the study of oceanic diatoms. Limnol. Oceanogr.: Methods 3: 462-476. doi:10. 4319/lom.2005.3.462
    • (2005) Limnol. Oceanogr.: Methods , vol.3 , pp. 462-476
    • Leblanc, K.1    Hutchins, D.A.2
  • 34
    • 35348977762 scopus 로고    scopus 로고
    • Coupled changes in the cell morphology and the elemental (C, N, and Si) composition of the pennate diatom Pseudo-nitzschia due to iron deficiency
    • doi:10.4319/lo.2007.52.5.2270
    • Marchetti, A., P. J. Harrison. 2007. Coupled changes in the cell morphology and the elemental (C, N, and Si) composition of the pennate diatom Pseudo-nitzschia due to iron deficiency. Limnol. Oceanogr. 52: 2270-2284. doi:10.4319/lo.2007.52.5.2270
    • (2007) Limnol. Oceanogr , vol.52 , pp. 2270-2284
    • Marchetti, A.1    Harrison, P.J.2
  • 35
    • 33751183320 scopus 로고    scopus 로고
    • Phytoplankton processes during a mesoscale iron enrichment in the NE subarctic Pacific: Part I-biomass and assemblage
    • doi:10.1016/ j.dsr2.2006.05.038
    • Marchetti, A., P. J. Harrison, N. D. Sherry, H. Kiyosawa, A. Tsuda, P. J. Harrison. 2006. Phytoplankton processes during a mesoscale iron enrichment in the NE subarctic Pacific: Part I-biomass and assemblage. Deep-Sea Res. II 53: 2095-2113. doi:10.1016/ j.dsr2.2006.05.038
    • (2006) Deep-Sea Res , vol.2 , Issue.53 , pp. 2095-2113
    • Marchetti, A.1    Harrison, P.J.2    Sherry, N.D.3    Kiyosawa, H.4    Tsuda, A.5    Harrison, P.J.6
  • 36
    • 75749134500 scopus 로고    scopus 로고
    • Iron and silicic acid effects on phytoplankton productivity, diversity, and chemical composition in the central equatorial Pacific Ocean
    • doi:10.4319/lo.2010.55.1.0011
    • Marchetti, A., P. J. Harrison, D. E. Varela, V. P. Lance, Z. Johnson, M. Palmucci, M. Giordano, E. V. Armbrust. 2010. Iron and silicic acid effects on phytoplankton productivity, diversity, and chemical composition in the central equatorial Pacific Ocean. Limnol. Oceanogr. 55: 11-29. doi:10.4319/lo.2010.55.1.0011
    • (2010) Limnol. Oceanogr , vol.55 , pp. 11-29
    • Marchetti, A.1    Harrison, P.J.2    Varela, D.E.3    Lance, V.P.4    Johnson, Z.5    Palmucci, M.6    Giordano, M.7    Armbrust, E.V.8
  • 37
    • 58749100808 scopus 로고    scopus 로고
    • Ferritin is used for iron storage in bloom-forming marine pennate diatoms
    • doi:10.1038/nature07539
    • Marchetti, A., P. J. Harrison, D. E. Varela. 2009. Ferritin is used for iron storage in bloom-forming marine pennate diatoms. Nature 457: 467-470. doi:10.1038/nature07539
    • (2009) Nature , vol.457 , pp. 467-470
    • Marchetti, A.1    Harrison, P.J.2    Varela, D.E.3
  • 38
    • 84857134530 scopus 로고    scopus 로고
    • Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability
    • doi:10.1073/pnas.1118408109
    • Marchetti, A., P. J. Harrison, D. E. Varela 2012. Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability. Proc. Natl. Acad. Sci. USA 109: E317-E325. doi:10.1073/pnas.1118408109
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109
    • Marchetti, A.1    Harrison, P.J.2    Varela, D.E.3
  • 39
    • 0025232051 scopus 로고
    • 2 change: The iron hypothesis
    • doi:10.1029/ PA005i001p00001
    • Martin, J. H. 1990. Glacial-interglacial CO2 change: The iron hypothesis. Paleoceanography 5: 1-13. doi:10.1029/ PA005i001p00001
    • (1990) Paleoceanography , vol.5 , pp. 1-13
    • Martin, J.H.1
  • 40
    • 77958610660 scopus 로고    scopus 로고
    • Placer: Linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
    • doi:10.1186/1471-2105-11-538
    • Matsen, F. A., R. B. Kodner, E. V. Armbrust. 2010. Placer: Linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree. BMC Bioinformat. 11: 538. doi:10.1186/1471-2105-11-538
    • (2010) BMC Bioinformat , vol.11 , pp. 538
    • Matsen, F.A.1    Kodner, R.B.2    Armbrust, E.V.3
  • 41
    • 0036770893 scopus 로고    scopus 로고
    • Silicic acid leakage from the Southern Ocean: A possible explanation for glacial atmospheric pCO(2)
    • doi:10.1029/2001GB001442
    • Matsumoto, K., J. L. Sarmiento, M. A. Brzezinski. 2002. Silicic acid leakage from the Southern Ocean: A possible explanation for glacial atmospheric pCO(2). Glob. Biogeo-chem. Cycles 16: 1031. doi:10.1029/2001GB001442
    • (2002) Glob. Biogeo-chem. Cycles , vol.16 , pp. 1031
    • Matsumoto, K.1    Sarmiento, J.L.2    Brzezinski, M.A.3
  • 42
    • 52449127981 scopus 로고    scopus 로고
    • Evolutionary diversification in polyamine biosynthesis
    • doi:10.1093/molbev/msn161
    • Minguet, E. G., F. Vera-Sirera, A. Marina, J. Carbonell, M. A. Blazquez. 2008. Evolutionary diversification in polyamine biosynthesis. Mol. Biol. Evol. 25: 2119-2128. doi:10.1093/molbev/msn161
    • (2008) Mol. Biol. Evol , vol.25 , pp. 2119-2128
    • Minguet, E.G.1    Vera-Sirera, F.2    Marina, A.3    Carbonell, J.4    Blazquez, M.A.5
  • 43
    • 40349116065 scopus 로고    scopus 로고
    • Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana identifies genes involved in silicon bioprocesses
    • doi:10.1073/pnas.0707946105
    • MOCK, T., ET AL. 2008. Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana identifies genes involved in silicon bioprocesses. Proc. Natl. Acad. Sci. USA 105: 1579-1584. doi:10.1073/pnas.0707946105
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 1579-1584
    • Mock, T.1
  • 44
    • 0036137938 scopus 로고    scopus 로고
    • Iron cycling and nutrient-limitation patterns in surface waters of the World Ocean
    • doi:10.1016/S0967-0645(01)00109-6
    • Moore, J. K., S. C. Doney, D. M. Glover, I. Y. Fung. 2002. Iron cycling and nutrient-limitation patterns in surface waters of the World Ocean. Deep-Sea Res. 2 49: 463-507. doi:10.1016/S0967-0645(01)00109-6
    • (2002) Deep-Sea Res , vol.2 , Issue.49 , pp. 463-507
    • Moore, J.K.1    Doney, S.C.2    Glover, D.M.3    Fung, I.Y.4
  • 45
    • 0029540174 scopus 로고
    • Production and dissolution of biogenic silica in the ocean-revised global estimates, comparison with regional data and relationship to biogenic sedimentation
    • doi:10.1029/95GB01070
    • Nelson, D. M., P. Treguer, M. A. Brzezinski, A. Leynaert, B. Queguiner. 1995. Production and dissolution of biogenic silica in the ocean-revised global estimates, comparison with regional data and relationship to biogenic sedimentation. Glob. Biogeochem. Cycles 9: 359-372. doi:10.1029/95GB01070
    • (1995) Glob. Biogeochem. Cycles , vol.9 , pp. 359-372
    • Nelson, D.M.1    Treguer, P.2    Brzezinski, M.A.3    Leynaert, A.4    Queguiner, B.5
  • 46
    • 77953176036 scopus 로고    scopus 로고
    • A scaling normalization method for differential expression analysis of RNA-seq data
    • doi:10.1186/gb-2010-11-3-r25
    • Robinson, M. D., A. Oshlack. 2010. A scaling normalization method for differential expression analysis of RNA-seq data. Genome Biol. 11: R25. doi:10.1186/gb-2010-11-3-r25
    • (2010) Genome Biol , vol.11
    • Robinson, M.D.1    Oshlack, A.2
  • 47
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen, S., H. Skaletsky. 2000. Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 132: 365-386.
    • (2000) Methods Mol. Biol , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 48
    • 70449433255 scopus 로고    scopus 로고
    • Genome-wide transcriptome analyses of silicon metabolism in Phaeodactylum tricornutum reveal the multilevel regulation of silicic acid transporters
    • doi:10.1371/journal.pone.0007458
    • Sapriel, G. 2009. Genome-wide transcriptome analyses of silicon metabolism in Phaeodactylum tricornutum reveal the multilevel regulation of silicic acid transporters. PloS One 4: e7458. doi:10.1371/journal.pone.0007458
    • (2009) PloS One , vol.4
    • Sapriel, G.1
  • 49
    • 79952748080 scopus 로고    scopus 로고
    • Nanopatterned protein microrings from a diatom that direct silica morphogenesis
    • doi:10.1073/pnas.1012842108
    • Scheffel, A., N. Poulsen, S. Shian, N. Kroeger. 2011. Nanopatterned protein microrings from a diatom that direct silica morphogenesis. Proc. Natl. Acad. Sci. USA 108: 3175-3180. doi:10.1073/pnas.1012842108
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 3175-3180
    • Scheffel, A.1    Poulsen, N.2    Shian, S.3    Kroeger, N.4
  • 50
    • 14644397888 scopus 로고    scopus 로고
    • RAxML-III: A fast program for maximum likelihood-based inference of large phylogenetic trees
    • doi:10.1093/ bioinformatics/bti191
    • Stamatakis, A., T. Ludwig, H. Meier. 2005. RAxML-III: A fast program for maximum likelihood-based inference of large phylogenetic trees. Bioinformatics 21: 456-463. doi:10.1093/ bioinformatics/bti191
    • (2005) Bioinformatics , vol.21 , pp. 456-463
    • Stamatakis, A.1    Ludwig, T.2    Meier, H.3
  • 51
    • 0032565970 scopus 로고    scopus 로고
    • Influence of iron availability on nutrient consumption ratio of diatoms in oceanic waters
    • doi:10.1038/31674
    • Takeda, S. 1998. Influence of iron availability on nutrient consumption ratio of diatoms in oceanic waters. Nature 393: 774-777. doi:10.1038/31674
    • (1998) Nature , vol.393 , pp. 774-777
    • Takeda, S.1
  • 52
    • 33746437506 scopus 로고    scopus 로고
    • Comparative sequence analysis of diatom silicon transporters: Toward a mechanistic model of silicon transport
    • doi:10.1111/j.1529-8817.2006.00233.x
    • Thamatrakoln, K., A. J. Alverson, M. Hildebrand. 2006. Comparative sequence analysis of diatom silicon transporters: Toward a mechanistic model of silicon transport. J. Phycol. 42: 822-834. doi:10.1111/j.1529-8817.2006.00233.x
    • (2006) J. Phycol , vol.42 , pp. 822-834
    • Thamatrakoln, K.1    Alverson, A.J.2    Hildebrand, M.3
  • 53
    • 33847212464 scopus 로고    scopus 로고
    • Analysis of Thalassiosira pseudonana silicon transporters indicates distinct regulatory levels and transport activity through the cell cycle
    • doi:10.1128/EC.00235-06
    • Thamatrakoln, K., A. J. Alverson, M. Hildebrand. 2007. Analysis of Thalassiosira pseudonana silicon transporters indicates distinct regulatory levels and transport activity through the cell cycle. Eukaryot. Cell 6: 271-279. doi:10.1128/EC.00235-06
    • (2007) Eukaryot. Cell , vol.6 , pp. 271-279
    • Thamatrakoln, K.1    Alverson, A.J.2    Hildebrand, M.3
  • 54
    • 8844262195 scopus 로고    scopus 로고
    • Element stoichiometries of individual plankton cells collected during the Southern Ocean Iron Experiment (SOFeX)
    • doi:10.4319/lo.2004.49.6.2115
    • Twining, B. S., S. B. Baines, N. S. Fisher. 2004. Element stoichiometries of individual plankton cells collected during the Southern Ocean Iron Experiment (SOFeX). Limnol. Oceanogr. 49: 2115-2128. doi:10.4319/lo.2004.49.6.2115
    • (2004) Limnol. Oceanogr , vol.49 , pp. 2115-2128
    • Twining, B.S.1    Baines, S.B.2    Fisher, N.S.3
  • 55
    • 41049103260 scopus 로고    scopus 로고
    • Silacidins: Highly acidic phosphopeptides from diatom shells assist in silica precipitation in vitro
    • doi:10.1002/anie.200704994
    • Wenzl, S., R. Hett, P. Richthammer, M. Sumper. 2008. Silacidins: Highly acidic phosphopeptides from diatom shells assist in silica precipitation in vitro. Angew. Chem. Int. Ed. 47: 1729-1732. doi:10.1002/anie.200704994
    • (2008) Angew. Chem. Int. Ed , vol.47 , pp. 1729-1732
    • Wenzl, S.1    Hett, R.2    Richthammer, P.3    Sumper, M.4


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