-
1
-
-
0032558686
-
Effect of matching of class I HLA alleles on clinical outcome after transplantation of hematopoietic stem cells from an unrelated donor
-
DOI 10.1056/NEJM199810223391701
-
Sasazuki T, Juji T, Morishima Y, Kinukawa N, Kashiwabara H, Inoko H, Yoshida T, Kimura A, Akaza T, Kamikawaji N, Kodera Y, Takaku F: Effect of matching of class I HLA alleles on clinical outcome after transplantation of hematopoietic stem cells from an unrelated donor. Japan Marrow Donor Program. N Engl J Med 1998, 339 (17):1177-1185. (Pubitemid 28482126)
-
(1998)
New England Journal of Medicine
, vol.339
, Issue.17
, pp. 1177-1185
-
-
Sasazuki, T.1
Juji, T.2
Morishima, Y.3
Kinukawa, N.4
Kashiwabara, H.5
Inoko, H.6
Yoshida, T.7
Kimura, A.8
Akaza, T.9
Kamikawaji, N.10
Kodera, Y.11
Takaku, F.12
Nose, Y.13
Ono, T.14
Sakamaki, T.15
Kato, S.16
Akiyama, Y.17
Okamoto, S.18
Dohy, H.19
Harada, M.20
Asano, S.21
more..
-
2
-
-
7244243895
-
Limits of HLA mismatching in unrelated hematopoietic cell transplantation
-
DOI 10.1182/blood-2004-04-1674
-
Petersdorf EW, Anasetti C, Martin PJ, Gooley T, Radich J, Malkki M, Woolfrey A, Smith A, Mickelson E, Hansen JA: Limits of HLA mismatching in unrelated hematopoietic cell transplantation. Blood 2004, 104(9):2976-2980. (Pubitemid 39434990)
-
(2004)
Blood
, vol.104
, Issue.9
, pp. 2976-2980
-
-
Petersdorf, E.W.1
Anasetti, C.2
Martin, P.J.3
Gooley, T.4
Radich, J.5
Malkki, M.6
Woolfrey, A.7
Smith, A.8
Mickelson, E.9
Hansen, J.A.10
-
3
-
-
4644359708
-
Impact of HLA class I and class II high-resolution matching on outcomes of unrelated donor bone marrow transplantation: HLA-C mismatching is associated with a strong adverse effect on transplantation outcome
-
DOI 10.1182/blood-2004-03-0803
-
Flomenberg N, Baxter-Lowe LA, Confer D, Fernandez-Vina M, Filipovich A, Horowitz M, Hurley C, Kollman C, Anasetti C, Noreen H, Begovich A, Hildebrand W, Petersdorf E, Schmeckpeper B, Setterholm M, Trachtenberg E, Williams T, Yunis E, Weisdorf D: Impact of HLA class I and class II high-resolution matching on outcomes of unrelated donor bone marrow transplantation: HLA-C mismatching is associated with a strong adverse effect on transplantation outcome. Blood 2004, 104(7):1923-1930. (Pubitemid 39297840)
-
(2004)
Blood
, vol.104
, Issue.7
, pp. 1923-1930
-
-
Flomenberg, N.1
Baxter-Lowe, L.A.2
Confer, D.3
Fernandez-Vina, M.4
Filipovich, A.5
Horowitz, M.6
Hurley, C.7
Kollman, C.8
Anasetti, C.9
Noreen, H.10
Begovich, A.11
Hildebrand, W.12
Petersdorf, E.13
Schmeckpeper, B.14
Setterholm, M.15
Trachtenberg, E.16
Williams, T.17
Yunis, E.18
Weisdorf, D.19
-
4
-
-
37349118061
-
High-resolution donor-recipient HLA matching contributes to the success of unrelated donor marrow transplantation
-
DOI 10.1182/blood-2007-06-097386
-
Lee SJ, Klein J, Haagenson M, Baxter-Lowe LA, Confer DL, Eapen M, Fernandez-Vina M, Flomenberg N, Horowitz M, Hurley CK, Noreen H, Oudshoorn M, Petersdorf E, Setterholm M, Spellman S, Weisdorf D, Williams TM, Anasetti C: High-resolution donor-recipient HLA matching contributes to the success of unrelated donor marrow transplantation. Blood 2007, 110(13):4576-4583. (Pubitemid 351377826)
-
(2007)
Blood
, vol.110
, Issue.13
, pp. 4576-4583
-
-
Lee, S.J.1
Klein, J.2
Haagenson, M.3
Baxter-Lowe, L.A.4
Confer, D.L.5
Eapen, M.6
Fernandez-Vina, M.7
Flomenberg, N.8
Horowitz, M.9
Hurley, C.K.10
Noreen, H.11
Oudshoorn, M.12
Petersdorf, E.13
Setterholm, M.14
Spellman, S.15
Weisdorf, D.16
Williams, T.M.17
Anasetti, C.18
-
5
-
-
0035892137
-
Bone marrow transplantation from unrelated donors: The impact of mismatches with substitutions at position 116 of the human leukocyte antigen class i heavy chain
-
Ferrara GB, Bacigalupo A, Lamparelli T, Lanino E, Delfino L, Morabito A, Parodi AM, Pera C, Pozzi S, Sormani MP, Bruzzi P, Bordo D, Bolognesi M, Bandini G, Bontadini A, Barbanti M, Frumento G: Bone marrow transplantation from unrelated donors: the impact of mismatches with substitutions at position 116 of the human leukocyte antigen class I heavy chain. Blood 2001, 98(10):3150-3155.
-
(2001)
Blood
, vol.98
, Issue.10
, pp. 3150-3155
-
-
Ferrara, G.B.1
Bacigalupo, A.2
Lamparelli, T.3
Lanino, E.4
Delfino, L.5
Morabito, A.6
Parodi, A.M.7
Pera, C.8
Pozzi, S.9
Sormani, M.P.10
Bruzzi, P.11
Bordo, D.12
Bolognesi, M.13
Bandini, G.14
Bontadini, A.15
Barbanti, M.16
Frumento, G.17
-
6
-
-
34948865802
-
High-risk HLA allele mismatch combinations responsible for severe acute graft-versus-host disease and implication for its molecular mechanism
-
DOI 10.1182/blood-2007-02-072405
-
Kato S, Juji T, Kodera Y, Sasazuki T: High-risk HLA allele mismatch combinations responsible for severe acute graft-versus-host disease and implication for its molecular mechanism. Blood 2007, 110 (7):2235-2241. (Pubitemid 47523140)
-
(2007)
Blood
, vol.110
, Issue.7
, pp. 2235-2241
-
-
Kawase, T.1
Morishima, Y.2
Matsuo, K.3
Kashiwase, K.4
Inoko, H.5
Saji, H.6
Kato, S.7
Juji, T.8
Kodera, Y.9
Sasazuki, T.10
-
7
-
-
59449094834
-
NetMHCpan, a method for MHC class i binding prediction beyond humans
-
Hoof I, Peters B, Sidney J, Pedersen LE, Sette A, Lund O, Buus S, Niesen M: NetMHCpan, a method for MHC class I binding prediction beyond humans. Immunogenetics 2009, 61:1-13.
-
(2009)
Immunogenetics
, vol.61
, pp. 1-13
-
-
Hoof, I.1
Peters, B.2
Sidney, J.3
Pedersen, L.E.4
Sette, A.5
Lund, O.6
Buus, S.7
Niesen, M.8
-
9
-
-
0043268726
-
What do TCR-pMHC crystal structures teach us about MHC restriction and alloreactivity?
-
DOI 10.1016/S1471-4906(03)00180-7
-
Housset D, Malissen B: What do TCR-pMHC crystal structures teach us about MHC restriction and alloreactivity? Trends Immunol 2003, 24(8):429-437. (Pubitemid 36928100)
-
(2003)
Trends in Immunology
, vol.24
, Issue.8
, pp. 429-437
-
-
Housset, D.1
Malissen, B.2
-
10
-
-
0036092367
-
HLAMatchmaker: A molecularly based algorithm for histocompatibility determination. I. Description of the algorithm
-
Duquesnoy RJ: HLAMatchmaker: a molecularly based algorithm for histocompatibility determination. I. Description of the algorithm. Hum Immunol 2002, 63 (5):339-352.
-
(2002)
Hum Immunol
, vol.63
, Issue.5
, pp. 339-352
-
-
Duquesnoy, R.J.1
-
11
-
-
0842323947
-
HistoCheck: Rating of HLA class I and II mismatches by an internet-based software tool
-
DOI 10.1038/sj.bmt.1704301
-
Elsner HA, DeLuca D, Strub J, Blasczyk R: HistoCheck: rating of HLA class I and II mismatches by an internetbased software tool . Bone Marrow Transplant 2004, 33(2):165-169. (Pubitemid 38180928)
-
(2004)
Bone Marrow Transplantation
, vol.33
, Issue.2
, pp. 165-169
-
-
Elsner, H.-A.1
DeLuca, D.2
Strub, J.3
Blasczyk, R.4
-
12
-
-
67849133677
-
An approach to predicting hematopoietic stem cell transplantation outcome using HLA-mismatch information mapped on protein structure data
-
Dudkiewicz M, Malanowski P, Czerwinacuteski J, Pawlstrokowski K: An approach to predicting hematopoietic stem cell transplantation outcome using HLA-mismatch information mapped on protein structure data. Biology of Blood and Marrow Transplantation 2009, 15(9):1014-1025.
-
(2009)
Biology of Blood and Marrow Transplantation
, vol.15
, Issue.9
, pp. 1014-1025
-
-
Dudkiewicz, M.1
Malanowski, P.2
Czerwinacuteski, J.3
Pawlstrokowski, K.4
-
13
-
-
49449086957
-
HLAMatchmaker-defined triplet matching is not associated with better survival rates of patients with class i HLA allele mismatched hematopoietic cell transplants from unrelated donors
-
Duquesnoy R, Spellman S, Haagenson M, Wang T, Horowitz MM, Oudshoorn M: HLAMatchmaker-defined triplet matching is not associated with better survival rates of patients with class I HLA allele mismatched hematopoietic cell transplants from unrelated donors. Biol Blood Marrow Transplant 2008, 14(9):1064-1071.
-
(2008)
Biol Blood Marrow Transplant
, vol.14
, Issue.9
, pp. 1064-1071
-
-
Duquesnoy, R.1
Spellman, S.2
Haagenson, M.3
Wang, T.4
Horowitz, M.M.5
Oudshoorn, M.6
-
14
-
-
50849138145
-
Clinical usefulness of HLAMatchmaker in HLA epitope matching for organ transplantation
-
Duquesnoy RJ: Clinical usefulness of HLAMatchmaker in HLA epitope matching for organ transplantation. Curr Opin Immunol 2008, 20(5):594-601.
-
(2008)
Curr Opin Immunol
, vol.20
, Issue.5
, pp. 594-601
-
-
Duquesnoy, R.J.1
-
15
-
-
4444282360
-
Scoring for HLA matching? A clinical test of HistoCheck
-
author reply 369
-
Shaw BE, Barber LD, Madrigal JA, Cleaver S, Marsh SG: Scoring for HLA matching? A clinical test of HistoCheck. Bone Marrow Transplant 2004, 34(4):367-368; author reply 369.
-
(2004)
Bone Marrow Transplant
, vol.34
, Issue.4
, pp. 367-368
-
-
Shaw, B.E.1
Barber, L.D.2
Madrigal, J.A.3
Cleaver, S.4
Marsh, S.G.5
-
16
-
-
0034213423
-
Crystal structure of an NK cell immunoglobulin-like receptor in complex with its class I MHC ligand
-
DOI 10.1038/35014520
-
Boyington J, Motyka S, Schuck P, Brooks A, Sun P: Crystal structure of an NK cell immunoglobulin-like receptor in complex with its class I MHC ligand. Nature 2000, 405(6786):537-543. (Pubitemid 30367719)
-
(2000)
Nature
, vol.405
, Issue.6786
, pp. 537-543
-
-
Boylngton, J.C.1
Motykat, S.A.2
Schuckt, P.3
Brooks, A.G.4
Sun, P.D.5
-
17
-
-
0033526774
-
Structure of Human Histocompatibility Leukocyte Antigen (Hla)-Cw4, a Ligand for the Kir2d Natural Killer Cell Inhibitory Receptor
-
Fan QR, Wiley DC: Structure of Human Histocompatibility Leukocyte Antigen (Hla)-Cw4, a Ligand for the Kir2d Natural Killer Cell Inhibitory Receptor. The Journal of Experimental Medicine 1999, 190:113-124.
-
(1999)
The Journal of Experimental Medicine
, vol.190
, pp. 113-124
-
-
Fan, Q.R.1
Wiley, D.C.2
-
18
-
-
39549084433
-
NetMHCpan, a method for quantitative predictions of peptide binding to any HLAA and -B locus protein of known sequence
-
Nielsen M, Lundegaard C, Blicher T, Lamberth K, Harndahl M, Justesen S, Røder G, Peters B, Sette A, Lund O, Buus S: NetMHCpan, a method for quantitative predictions of peptide binding to any HLAA and -B locus protein of known sequence. PLoS ONE 2007, 2 (8):e796.
-
(2007)
PLoS ONE
, vol.2
, Issue.8
-
-
Nielsen, M.1
Lundegaard, C.2
Blicher, T.3
Lamberth, K.4
Harndahl, M.5
Justesen, S.6
Røder, G.7
Peters, B.8
Sette, A.9
Lund, O.10
Buus, S.11
-
19
-
-
2142738304
-
WebLogo: A sequence logo generator
-
DOI 10.1101/gr.849004
-
Crooks GE, Hon G, Chandonia JM, Brenner SE:WebLogo: a sequence logo generator. Genome Res 2004, 14 (6):1188-90. (Pubitemid 38811555)
-
(2004)
Genome Research
, vol.14
, Issue.6
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.-M.3
Brenner, S.E.4
-
20
-
-
0038161052
-
Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations
-
DOI 10.1016/S0022-2836(03)00670-3
-
Gray JJ, Moughon S, Wang C, Schueler-Furman O, Kuhlman B, Rohl CA, Baker D: Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations. J Mol Biol 2003, 331:281-299. (Pubitemid 36870793)
-
(2003)
Journal of Molecular Biology
, vol.331
, Issue.1
, pp. 281-299
-
-
Gray, J.J.1
Moughon, S.2
Wang, C.3
Schueler-Furman, O.4
Kuhlman, B.5
Rohl, C.A.6
Baker, D.7
-
21
-
-
0345306764
-
Design of a Novel Globular Protein Fold with Atomic-Level Accuracy
-
DOI 10.1126/science.1089427
-
Kuhlman B, Dantas G, Ireton GC, Varani G, Stoddard BL, Baker D: Design of a novel globular protein fold with atomic-level accuracy. Science 2003, 302(5649):1364-1368. (Pubitemid 37452172)
-
(2003)
Science
, vol.302
, Issue.5649
, pp. 1364-1368
-
-
Kuhlman, B.1
Dantas, G.2
Ireton, G.C.3
Varani, G.4
Stoddard, B.L.5
Baker, D.6
-
22
-
-
0031585984
-
Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and Bayesian scoring functions
-
DOI 10.1006/jmbi.1997.0959
-
Simons KT, Kooperberg C, Huang E, Baker D: Assembly of protein tertiary structures from fragments with similar local sequences using simlated annealing and Bayesian scoring functions. J Mol Biol 1997, 268:209-225. (Pubitemid 27192690)
-
(1997)
Journal of Molecular Biology
, vol.268
, Issue.1
, pp. 209-225
-
-
Simons, K.T.1
Kooperberg, C.2
Huang, E.3
Baker, D.4
-
23
-
-
34548861782
-
Protein-Protein Docking with Backbone Flexibility
-
DOI 10.1016/j.jmb.2007.07.050, PII S0022283607010030
-
Wang C, Bradley P, Baker D: Protein-protein docking with backbone flexibility. J Mol Biol 2007, 373(2):503-519. (Pubitemid 47445567)
-
(2007)
Journal of Molecular Biology
, vol.373
, Issue.2
, pp. 503-519
-
-
Wang, C.1
Bradley, P.2
Baker, D.3
-
24
-
-
14644438345
-
Progress and challenges in high-resolution refinement of protein structure models
-
DOI 10.1002/prot.20376
-
Misura KMS, Baker D: Progress and challenges in high-resolution refinement of protein structure models. Proteins 2005, 59:15-29. (Pubitemid 40316474)
-
(2005)
Proteins: Structure, Function and Genetics
, vol.59
, Issue.1
, pp. 15-29
-
-
Misura, K.M.S.1
Baker, D.2
-
25
-
-
5744249209
-
Equations of State Calculations by Fast Computing Machines
-
Metropolis NA, Rosenbluth AW, Rosenbluth NM, Teller AH, Teller E: Equations of State Calculations by Fast Computing Machines. J. Chem. Phys. 1953, 21:1087-1091.
-
(1953)
J. Chem. Phys.
, vol.21
, pp. 1087-1091
-
-
Metropolis, N.A.1
Rosenbluth, A.W.2
Rosenbluth, N.M.3
Teller, A.H.4
Teller, E.5
-
26
-
-
0025008168
-
Sequence logos: A new way to display consensus sequences
-
Schneider TD, Stephens RM: Sequence logos: a new way to display consensus sequences. Nucleic Acids Res 1990, 18 (20):6097-6100.
-
(1990)
Nucleic Acids Res
, vol.18
, Issue.20
, pp. 6097-6100
-
-
Schneider, T.D.1
Stephens, R.M.2
-
27
-
-
0025952277
-
Divergence measures based on the Shannon entropy
-
Lin J: Divergence measures based on the Shannon entropy. IEEE Transactions on Information theory 1991, 37:145-151.
-
(1991)
IEEE Transactions on Information Theory
, vol.37
, pp. 145-151
-
-
Lin, J.1
|