-
1
-
-
18744382506
-
ProTest: Selection of best-fit models of protein evolution
-
Abascal, F., Zardoya, R., and Posada, D. (2005). ProTest: selection of best-fit models of protein evolution. Bioinformatics 21, 2104-2105.
-
(2005)
Bioinformatics
, vol.21
, pp. 2104-2105
-
-
Abascal, F.1
Zardoya, R.2
Posada, D.3
-
2
-
-
0029974748
-
Model of amino acid substitution in proteins encoded by mitochondrial DNA
-
Adachi, J., and Hasegawa, M. (1996). Model of amino acid substitution in proteins encoded by mitochondrial DNA. J Mol Evol 42, 459-468.
-
(1996)
J Mol Evol
, vol.42
, pp. 459-468
-
-
Adachi, J.1
Hasegawa, M.2
-
3
-
-
0016355478
-
A new look at the statistical model identification
-
Akaike, H. (1974). A new look at the statistical model identification. IEEE Trans Autom Contr 19, 716-723.
-
(1974)
IEEE Trans Autom Contr
, vol.19
, pp. 716-723
-
-
Akaike, H.1
-
4
-
-
33745947603
-
Molecular phylogeny of silkmoths reveals the origin of domesticated silkmoth, Bombyx mori from Chinese Bombyx mandarina and paternal inheritance of Antheraea proylei mitochondrial DNA
-
Arunkumar, K.P., Metta, M., and Nagaraju, J. (2006). Molecular phylogeny of silkmoths reveals the origin of domesticated silkmoth, Bombyx mori from Chinese Bombyx mandarina and paternal inheritance of Antheraea proylei mitochondrial DNA. Mol Phylogenet Evol 40, 419-427.
-
(2006)
Mol Phylogenet Evol
, vol.40
, pp. 419-427
-
-
Arunkumar, K.P.1
Metta, M.2
Nagaraju, J.3
-
5
-
-
0027898410
-
The mitochondrial genome of the mosquito Anopheles gambiae: DNA sequence, genome organization and comparisons with mitochondrial sequences of other insects
-
Beard, C.B., Mills, D., and Collins, F.H. (1993). The mitochondrial genome of the mosquito Anopheles gambiae: DNA sequence, genome organization and comparisons with mitochondrial sequences of other insects. Insect Mol Biol 2, 103-124.
-
(1993)
Insect Mol Biol
, vol.2
, pp. 103-124
-
-
Beard, C.B.1
Mills, D.2
Collins, F.H.3
-
6
-
-
0033561361
-
Animal mitochondrial genomes
-
Boore, J.L. (1999). Animal mitochondrial genomes. Nucleic Acids Res 27, 1767-1780.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1767-1780
-
-
Boore, J.L.1
-
7
-
-
0035543637
-
Structure and evolution of the mitochondrial DNA complete control region in the Drosophila subobscura subgroup
-
Brehm, A., Harris, D.J., Hernández, M., Cabrera, V.M., Larruga, J.M., Pinto, F.M., and Gonzá lez, A.M. (2001). Structure and evolution of the mitochondrial DNA complete control region in the Drosophila subobscura subgroup. Insect Mol Biol 10, 573-578.
-
(2001)
Insect Mol Biol
, vol.10
, pp. 573-578
-
-
Brehm, A.1
Harris, D.J.2
Hernández, M.3
Cabrera, V.M.4
Larruga, J.M.5
Pinto, F.M.6
González, A.M.7
-
8
-
-
36148999042
-
The mitochondrial genome of the screamer Louse Bothriometopus (Phthiraptera: Ischnocera): effects of extensive gene rearrangements on the evolution of the genome
-
Cameron, S.L., Johnson, K.P., and Whiting, M.F. (2007). The mitochondrial genome of the screamer Louse Bothriometopus (Phthiraptera: Ischnocera): effects of extensive gene rearrangements on the evolution of the genome. J Mol Evol 65, 589-604.
-
(2007)
J Mol Evol
, vol.65
, pp. 589-604
-
-
Cameron, S.L.1
Johnson, K.P.2
Whiting, M.F.3
-
9
-
-
37549067395
-
The complete mitochondrial genome of the tobacco hornworm, Manduca sexta, (Insecta: Lepidoptera: Sphingidae), and an examination of mitochondrial gene variability within butterflies and moths
-
Cameron, S.L., and Whiting, M.F. (2008). The complete mitochondrial genome of the tobacco hornworm, Manduca sexta, (Insecta: Lepidoptera: Sphingidae), and an examination of mitochondrial gene variability within butterflies and moths. Gene 408, 112-123.
-
(2008)
Gene
, vol.408
, pp. 112-123
-
-
Cameron, S.L.1
Whiting, M.F.2
-
10
-
-
2942571539
-
The comparative RNA web (CRW) site: An online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
-
Cannone, J.J., Subramanian, S., Schnare, M.N., Collett, J.R., D'Souza, L.M., Du, Y., Feng, B., Lin, N., Madabusi, L.V., and Muller, K.M. (2002). The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC Bioinformatics 3, 1471-2105.
-
(2002)
BMC Bioinformatics
, vol.3
, pp. 1471-2105
-
-
Cannone, J.J.1
Subramanian, S.2
Schnare, M.N.3
Collett, J.R.4
D'Souza, L.M.5
Du, Y.6
Feng, B.7
Lin, N.8
Madabusi, L.V.9
Muller, K.M.10
-
11
-
-
33947577385
-
The complete nucleotide sequence and gene organization of the mitochondrial genome of the bumblebee
-
Cha, S.Y., Yoon, H.J., Lee, E.M., Yoon, M.H., Hwang, J.S., Jin, B.R., Han, Y.S., and Kim, I. (2007). The complete nucleotide sequence and gene organization of the mitochondrial genome of the bumblebee, Bombus ignitus (Hymenoptera: Apidae). Gene 392, 206-220.
-
(2007)
Bombus Ignitus (Hymenoptera: Apidae). Gene
, vol.392
, pp. 206-220
-
-
Cha, S.Y.1
Yoon, H.J.2
Lee, E.M.3
Yoon, M.H.4
Hwang, J.S.5
Jin, B.R.6
Han, Y.S.7
Kim, I.8
-
12
-
-
0022271984
-
The mitochondrial DNA molecular of Drosophila yakuba: Nucleotide sequence, gene organization, and genetic code
-
Clary, D.O., and Wolstenholme, D.R. (1985). The mitochondrial DNA molecular of Drosophila yakuba: nucleotide sequence, gene organization, and genetic code. J Mol Evol 22, 252-271.
-
(1985)
J Mol Evol
, vol.22
, pp. 252-271
-
-
Clary, D.O.1
Wolstenholme, D.R.2
-
13
-
-
0023080967
-
Drosophila mitochondrial DNA: Conserved sequences in the A+ T-rich region and supporting evidence for a secondary structure model of the small ribosomal RNA
-
Clary, D.O., and Wolstenholme, D.R. (1987). Drosophila mitochondrial DNA: conserved sequences in the A+ T-rich region and supporting evidence for a secondary structure model of the small ribosomal RNA. J Mol Evol 25, 116-125.
-
(1987)
J Mol Evol
, vol.25
, pp. 116-125
-
-
Clary, D.O.1
Wolstenholme, D.R.2
-
14
-
-
33645452236
-
Partial mitochondrial genome sequence of Ostrinia nubilalis and Ostrinia furnicalis
-
Coates, B.S., Sumerford, D.V., Hellmich, R.L., and Lewis, L.C. (2005). Partial mitochondrial genome sequence of Ostrinia nubilalis and Ostrinia furnicalis. Int J Biol Sci 1, 13-18.
-
(2005)
Int J Biol Sci
, vol.1
, pp. 13-18
-
-
Coates, B.S.1
Sumerford, D.V.2
Hellmich, R.L.3
Lewis, L.C.4
-
15
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar, R.C. (2004). MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32, 1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
16
-
-
78149467933
-
The mitochondrial genome of the butterfly Papilio xuthus (Lepidoptera: Papilionidae) and related phylogenetic analyses
-
Feng, X., Liu, D.F., Wang, N.X., Zhu, C.D., and Jiang, G.F. (2010). The mitochondrial genome of the butterfly Papilio xuthus (Lepidoptera: Papilionidae) and related phylogenetic analyses. Mol Biol Rep 37, 3877-3888.
-
(2010)
Mol Biol Rep
, vol.37
, pp. 3877-3888
-
-
Feng, X.1
Liu, D.F.2
Wang, N.X.3
Zhu, C.D.4
Jiang, G.F.5
-
17
-
-
33847708768
-
The complete mitochondrial genome of the Mormon cricket (Anabrus simplex: Tettigoniidae: Orthoptera) and an analysis of control region variability
-
Fenn, J.D., Cameron, S.L., and Whiting, M.F. (2007). The complete mitochondrial genome of the Mormon cricket (Anabrus simplex: Tettigoniidae: Orthoptera) and an analysis of control region variability. Insect Mol Biol 16, 239-252.
-
(2007)
Insect Mol Biol
, vol.16
, pp. 239-252
-
-
Fenn, J.D.1
Cameron, S.L.2
Whiting, M.F.3
-
18
-
-
0010634369
-
Identification of 5,9-dimethylheptadecane as a sex pheromone of the moth Leucoptera scitella
-
Francke, W., Franke, S., Toth, M., Szö cs, G., Guerin, P., and Arn, H. (1987). Identification of 5,9-dimethylheptadecane as a sex pheromone of the moth Leucoptera scitella. Naturwissenschaften 74, 143-144.
-
(1987)
Naturwissenschaften
, vol.74
, pp. 143-144
-
-
Francke, W.1
Franke, S.2
Toth, M.3
Szöcs, G.4
Guerin, P.5
Arn, H.6
-
19
-
-
33750442556
-
Characteristics of the nuclear (18S, 5.8S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of Apis mellifera (Insecta: Hymenoptera): structure, organization, and retrotransposable elements
-
Gillespie, J.J., Johnston, J.S., Cannone, J.J., and Gutell, R.R. (2006). Characteristics of the nuclear (18S, 5.8S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of Apis mellifera (Insecta: Hymenoptera): structure, organization, and retrotransposable elements. Insect Mol Biol 15, 657-686.
-
(2006)
Insect Mol Biol
, vol.15
, pp. 657-686
-
-
Gillespie, J.J.1
Johnston, J.S.2
Cannone, J.J.3
Gutell, R.R.4
-
20
-
-
84863607700
-
The complete mitochondrial genome of the oriental fruit moth Grapholita molesta (Busck Lepidoptera: Tortricidae)
-
Gong, Y.J., Shi, B.C., Kang, Z.J., Zhang, F., and Wei, S.J. (2011). The complete mitochondrial genome of the oriental fruit moth Grapholita molesta (Busck) (Lepidoptera: Tortricidae). Mol Biol Rep 39, 2893-2900.
-
(2011)
Mol Biol Rep
, vol.39
, pp. 2893-2900
-
-
Gong, Y.J.1
Shi, B.C.2
Kang, Z.J.3
Zhang, F.4
Wei, S.J.5
-
21
-
-
0002051540
-
BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall, T.A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
-
(1999)
Nucleic Acids Symp ser
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
22
-
-
68549089107
-
The complete nucleotide sequence of the mitochondrial genome of the cabbage butterfly Artogeia melete (Lepidoptera: Pieridae)
-
Hong, G.Y., Jiang, S.T., Yu, M., Yang, Y., Li, F., Xue, F.S., and Wei, Z.J. (2009). The complete nucleotide sequence of the mitochondrial genome of the cabbage butterfly, Artogeia melete (Lepidoptera: Pieridae). Acta Biochim Biophys Sin 41, 446-455.
-
(2009)
Acta Biochim Biophys Sin
, vol.41
, pp. 446-455
-
-
Hong, G.Y.1
Jiang, S.T.2
Yu, M.3
Yang, Y.4
Li, F.5
Xue, F.S.6
Wei, Z.J.7
-
23
-
-
41249094990
-
Complete nucleotide sequence and organization of the mitogenome of the silk moth Caligula boisduvalii (Lepidoptera: Saturniidae) and comparison with other lepidopteran insects
-
Hong, M.Y., Lee, E.M., Jo, Y.H., Park, H.C., Kim, S.R., Hwang, J.S., Jin, B.R., Kang, P.D., Kim, K.G., Han, Y.S., and Kim, I. (2008). Complete nucleotide sequence and organization of the mitogenome of the silk moth Caligula boisduvalii (Lepidoptera: Saturniidae) and comparison with other lepidopteran insects. Gene 30, 413:49-57.
-
(2008)
Gene
, vol.30
, Issue.413
, pp. 49-57
-
-
Hong, M.Y.1
Lee, E.M.2
Jo, Y.H.3
Park, H.C.4
Kim, S.R.5
Hwang, J.S.6
Jin, B.R.7
Kang, P.D.8
Kim, K.G.9
Han, Y.S.10
Kim, I.11
-
24
-
-
77952226095
-
The complete mitochondrial genome of the yellow coaster, Acraea issoria (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini): sequence, gene organization and a unique tRNA translocation event
-
Hu, J., Zhang, D.X., Hao, J.S., Huang, D.Y., Cameron, S., and Zhu, C.D. (2010). The complete mitochondrial genome of the yellow coaster, Acraea issoria (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini): sequence, gene organization and a unique tRNA translocation event. Mol Biol Rep 37, 431-3438.
-
(2010)
Mol Biol Rep
, vol.37
, pp. 431-3438
-
-
Hu, J.1
Zhang, D.X.2
Hao, J.S.3
Huang, D.Y.4
Cameron, S.5
Zhu, C.D.6
-
25
-
-
0034849408
-
MrBayes: Bayesian inference of phylogeny
-
Huelsenbeck, J.P., and Ronquist, F. (2001). MrBayes: bayesian inference of phylogeny. Bioinformatics 17, 754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
26
-
-
67651183821
-
Characterization of the complete mitochondrial genome of the giant silkworm moth, Eriogyna pyretorum (Lepidoptera: Saturniidae
-
Jiang, S., Hong, G., Yu, M., Li, N., Yang, Y., Liu, Y., and Wei, Z. (2009). Characterization of the complete mitochondrial genome of the giant silkworm moth, Eriogyna pyretorum (Lepidoptera: Saturniidae). Int J Biol Sci 5, 351-365.
-
(2009)
Int J Biol Sci
, vol.5
, pp. 351-365
-
-
Jiang, S.1
Hong, G.2
Yu, M.3
Li, N.4
Yang, Y.5
Liu, Y.6
Wei, Z.7
-
27
-
-
4444293341
-
The mitochondrial genome of the blowfly Chrysomya chloropyga (Diptera: Calliphoridae
-
Junqueira, A.C.M., Lessinger, A.C., Torres, T.T., da Silva, F.R., Vettore, A.L., Arruda, P., and Espin, A.M.L.A. (2004).The mitochondrial genome of the blowfly Chrysomya chloropyga (Diptera: Calliphoridae). Gene 339, 7-15.
-
(2004)
Gene
, vol.339
, pp. 7-15
-
-
Junqueira, A.C.M.1
Lessinger, A.C.2
Torres, T.T.3
Da Silva, F.R.4
Vettore, A.L.5
Arruda, P.6
Espin, A.M.L.A.7
-
28
-
-
33645451073
-
The mitochondrial genome of the Korean hairstreak Coreana raphaelis (Lepidoptera: Lycaenidae)
-
Kim, I., Lee, E.M., Seol, K.Y., Yun, E.Y., Lee, Y.B., Hwang, J.S., and Jin, B.R. (2006). The mitochondrial genome of the Korean hairstreak, Coreana raphaelis (Lepidoptera: Lycaenidae). Insect Mol Biol 15, 217-225.
-
(2006)
Insect Mol Biol
, vol.15
, pp. 217-225
-
-
Kim, I.1
Lee, E.M.2
Seol, K.Y.3
Yun, E.Y.4
Lee, Y.B.5
Hwang, J.S.6
Jin, B.R.7
-
29
-
-
72449158660
-
Complete nucleotide sequence and organization of the mitogenome of the red-spotted apollo butterfly, Parnassius bremeri (Lepidoptera: Papilionidae) and comparison with other Lepidopteran insects
-
Kim, M.I., Baek, J.Y., Kim, M.J., Jeong, H.C., Kim, K.G., Bae, C.H., Han, Y.S., Jin, B.R., and Kim, I. (2009). Complete nucleotide sequence and organization of the mitogenome of the red-spotted apollo butterfly, Parnassius bremeri (Lepidoptera: Papilionidae) and comparison with other Lepidopteran insects. Mol Cells 28, 347-363.
-
(2009)
Mol Cells
, vol.28
, pp. 347-363
-
-
Kim, M.I.1
Baek, J.Y.2
Kim, M.J.3
Jeong, H.C.4
Kim, K.G.5
Bae, C.H.6
Han, Y.S.7
Jin, B.R.8
Kim, I.9
-
30
-
-
76649102127
-
Complete nucleotide sequence and organization of the mitogenome of endangered Eumenis autonoe (Lepidoptera: Nymphalidae
-
Kim, M.J., Wan, X.L., Kim, K.G., Hwang, J.S., and Kim, I. (2010). Complete nucleotide sequence and organization of the mitogenome of endangered Eumenis autonoe (Lepidoptera: Nymphalidae). African J Biotech 9, 735-754.
-
(2010)
African J Biotech
, vol.9
, pp. 735-754
-
-
Kim, M.J.1
Wan, X.L.2
Kim, K.G.3
Hwang, J.S.4
Kim, I.5
-
31
-
-
65149091662
-
The complete mitogenome sequence of the Japanese oak silkmoth Antheraea yamamai (Lepidoptera: Saturniidae)
-
Kim, S.R., Kim, M.I., Hong, M.Y., Kim, K.Y., Kang, P.D., Hwang, J.S., Han, Y.S., Jin, B.R., and Kim, I. (2009). The complete mitogenome sequence of the Japanese oak silkmoth, Antheraea yamamai (Lepidoptera: Saturniidae). Mol Biol Rep 36, 1871-1880.
-
(2009)
Mol Biol Rep
, vol.36
, pp. 1871-1880
-
-
Kim, S.R.1
Kim, M.I.2
Hong, M.Y.3
Kim, K.Y.4
Kang, P.D.5
Hwang, J.S.6
Han, Y.S.7
Jin, B.R.8
Kim, I.9
-
32
-
-
0033511651
-
Monitoring of the leafminer Leucoptera scitella Zell (Lepidoptera: Lyonetidae) by pheromene traps in Bulgaria
-
Koutinkova, H., Andreev, R., Subchev, M., Tóth,M., and Szô cs, G. (1999). Monitoring of the leafminer Leucoptera scitella Zell (Lepidoptera: Lyonetidae) by pheromene traps in Bulgaria. Acta Phytopathologica et Entomologica Hungarica 34, 327-331.
-
(1999)
Acta Phytopathologica et Entomologica Hungarica
, vol.34
, pp. 327-331
-
-
Koutinkova, H.1
Andreev, R.2
Subchev, M.3
Tóth, M.4
Szôcs, G.5
-
33
-
-
38349086127
-
Lepidoptera phylogeny and systematics: The state of inventorying moth and butterfly diversity
-
Kristensen, N.P., Scoble, M.J., and Karsholt, O. (2007). Lepidoptera phylogeny and systematics: the state of inventorying moth and butterfly diversity. Zootaxa 1668, 699-747.
-
(2007)
Zootaxa
, vol.1668
, pp. 699-747
-
-
Kristensen, N.P.1
Scoble, M.J.2
Karsholt, O.3
-
34
-
-
85064942798
-
Phylogeny and paleontology
-
N.P. Kristensen, ed De Gruyter, Berlin and New York
-
Kristensen, N.P., and Skalski, A.W. (1999). Phylogeny and paleontology. In: Lepidoptera: Moths and Butterflies, Evolution, Systematics, and Biogeography, Handbook of Zoology Vol IV, Part 35. N.P. Kristensen, ed. (De Gruyter, Berlin and New York), pp. 7-25.
-
(1999)
Lepidoptera: Moths and Butterflies, Evolution, Systematics, and Biogeography, Handbook of Zoology
, vol.6
, Issue.PART 35
, pp. 7-25
-
-
Kristensen, N.P.1
Skalski, A.W.2
-
35
-
-
0021277009
-
A new method for calculating evolutionary substitution rates
-
Lanave, C., Preparata, G., Saccone, C., and Serio, G. (1984). A new method for calculating evolutionary substitution rates. J Mol Evol 20, 86-93.
-
(1984)
J Mol Evol
, vol.20
, pp. 86-93
-
-
Lanave, C.1
Preparata, G.2
Saccone, C.3
Serio, G.4
-
36
-
-
33646241532
-
The mitochondrial genome of the smaller tea tortrix Adoxophyes honmai (Lepidoptera: Tortricidae
-
Lee, E.S., Shin, K.S., Kim, M.S., Park, H., Cho, S., and Kim, C.B. (2006). The mitochondrial genome of the smaller tea tortrix Adoxophyes honmai (Lepidoptera: Tortricidae). Gene 373, 52-57.
-
(2006)
Gene
, vol.373
, pp. 52-57
-
-
Lee, E.S.1
Shin, K.S.2
Kim, M.S.3
Park, H.4
Cho, S.5
Kim, C.B.6
-
37
-
-
84867026437
-
Structural characteristics and phylogenetic analysis of the mitochondrial genome of the sugarcane borerDiatraea saccharalis (Lepidoptera: Crambidae)
-
Li, W., Zhang, X., Fan, Z., Yue, B., Huang, F., King, E., and Ran, J. (2010). Structural characteristics and phylogenetic analysis of the mitochondrial genome of the sugarcane borer, Diatraea saccharalis (Lepidoptera: Crambidae). DNA Cell Biol 00, 1-6.
-
(2010)
DNA Cell Biol
, vol.0
, pp. 1-6
-
-
Li, W.1
Zhang, X.2
Fan, Z.3
Yue, B.4
Huang, F.5
King, E.6
Ran, J.7
-
38
-
-
77952210932
-
The complete mitochon-drial genome of the fall webworm, Hyphantria cunea (Lepidoptera: Arctiidae
-
Liao, F., Wang, L., Wu, S., Li, Y.P., Zhao, L., Huang, G.M., Niu, C.J., Liu, Y.Q., and Li, M.G. (2010). The complete mitochon-drial genome of the fall webworm, Hyphantria cunea (Lepidoptera: Arctiidae). Int J Biol Sci 6, 172-186.
-
(2010)
Int J Biol Sci
, vol.6
, pp. 172-186
-
-
Liao, F.1
Wang, L.2
Wu, S.3
Li, Y.P.4
Zhao, L.5
Huang, G.M.6
Niu, C.J.7
Liu, Y.Q.8
Li, M.G.9
-
39
-
-
49649122025
-
The complete mitochondrial genome of the Chinese oak silkmoth Antheraea pernyi (Lepidoptera: Saturniidae)
-
Liu, Y.Q., Li, Y.P., Pan, M.H., Dai, F.Y., Zhu, X.W., Lu, C., and Xiang, Z.H. (2008). The complete mitochondrial genome of the Chinese oak silkmoth, Antheraea pernyi (Lepidoptera: Saturniidae). Acta Biochim Biophys Sin 40, 693-703.
-
(2008)
Acta Biochim Biophys Sin
, vol.40
, pp. 693-703
-
-
Liu, Y.Q.1
Li, Y.P.2
Pan, M.H.3
Dai, F.Y.4
Zhu, X.W.5
Lu, C.6
Xiang, Z.H.7
-
40
-
-
0030854739
-
TRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
-
Lowe, T.M., and Eddy, S.R. (1997). tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res 25, 955-964.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
41
-
-
79551634105
-
Mitochondrial genome sequence and expression profiling for the legume pod borer Maruca vitrata (Lepidoptera: Crambidae
-
Margam, V.M., Coates, B.S., Hellmich, R.L., Agunbiade, T., Seufferheld, M.J., Sun, W., Ba, M.N., Sanon, A., Binso-Dabire, C.L., Baoua, I., Ishiyaku, M.F., Covas, F.G., Srinivasan, R., Armstrong, J., Murdock, L.L., and Pittendrigh, B.R. (2011). Mitochondrial genome sequence and expression profiling for the legume pod borer Maruca vitrata (Lepidoptera: Crambidae). PLoS One 6, e16444.
-
(2011)
PLoS One
, vol.6
-
-
Margam, V.M.1
Coates, B.S.2
Hellmich, R.L.3
Agunbiade, T.4
Seufferheld, M.J.5
Sun, W.6
Ba, M.N.7
Sanon, A.8
Binso-Dabire, C.L.9
Baoua, I.10
Ishiyaku, M.F.11
Covas, F.G.12
Srinivasan, R.13
Armstrong, J.14
Murdock, L.L.15
Pittendrigh, B.R.16
-
42
-
-
84985386629
-
Taxonomische Bearbeitung der westpalaearktischen Arten der Gattung Leucoptera Hübner [1825] s.l Lep.: Lyonetiidae)
-
Mey, W. (1994). Taxonomische Bearbeitung der westpalaearktischen Arten der Gattung Leucoptera Hübner, [1825], s.l. (Lep.: Lyonetiidae). Dtsch Entomologische Z N F 41, 173-234.
-
(1994)
Dtsch Entomologische Z N F
, vol.41
, pp. 173-234
-
-
Mey, W.1
-
43
-
-
0345526451
-
The mitochondrial genome of the olive fly Bactrocera oleae: Two haplotypes from distant geographic locations
-
Nardi, F., Caeapelli, A., Dallai, R., and Frati, F. (2003). The mitochondrial genome of the olive fly Bactrocera oleae: two haplotypes from distant geographic locations. Insect Mol Biol 12, 605-611.
-
(2003)
Insect Mol Biol
, vol.12
, pp. 605-611
-
-
Nardi, F.1
Caeapelli, A.2
Dallai, R.3
Frati, F.4
-
44
-
-
48749100085
-
Characterization of mitochondrial genome of Chinese wild mulberry silkworm Bomyx mandarina (Lepidoptera: Bombycidae)
-
Pan,M.H., Yu, Q.Y., Xia, Y.L., Dai, F.Y., Liu, Y.Q., Lu, C., Zhang, Z., and Xiang, Z.H. (2008). Characterization of mitochondrial genome of Chinese wild mulberry silkworm, Bomyx mandarina (Lepidoptera: Bombycidae). Sci China Ser C-Life Sci 51, 693-701.
-
(2008)
Sci China ser C-Life Sci
, vol.51
, pp. 693-701
-
-
Pan, M.H.1
Yu, Q.Y.2
Xia, Y.L.3
Dai, F.Y.4
Liu, Y.Q.5
Lu, C.6
Zhang, Z.7
Xiang, Z.H.8
-
45
-
-
0031773680
-
Modeltest: Testing the model of DNA substitution
-
Posada, D., Crandal, K.A. (1998). Modeltest: testing the model of DNA substitution. Bioinformatics 14, 817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandal, K.A.2
-
46
-
-
72949097264
-
Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study
-
Regier, J.C., Zwick, A., Cummings, M.P., Kawahara, A.Y., Cho, S., Weller, S., Roe, A., Baixeras, J., Brown, J.W., Parr, C., Davis, D.R., Epstein, M., Hallwachs, W., Hausmann, A., Janzen, D.H., Kitching, I.J., Solis, M.A., Yen, S.H., Bazinet, A.L., and Mitter, C. (2009). Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study. BMC Evol Biol 9, 280.
-
(2009)
BMC Evol Biol
, vol.9
, pp. 280
-
-
Regier, J.C.1
Zwick, A.2
Cummings, M.P.3
Kawahara, A.Y.4
Cho, S.5
Weller, S.6
Roe, A.7
Baixeras, J.8
Brown, J.W.9
Parr, C.10
Davis, D.R.11
Epstein, M.12
Hallwachs, W.13
Hausmann, A.14
Janzen, D.H.15
Kitching, I.J.16
Solis, M.A.17
Yen, S.H.18
Bazinet, A.L.19
Mitter, C.20
more..
-
47
-
-
48249119889
-
The complete mitochondrial genome of the bag-shelter moth Ochrogaster lunifer (Lepidoptera: Notodontidae
-
Salvato, P., Simonato, M., Battisti, A., and Negrisolo, E. (2008). The complete mitochondrial genome of the bag-shelter moth Ochrogaster lunifer (Lepidoptera: Notodontidae). BMC Genomics 9, 331-345.
-
(2008)
BMC Genomics
, vol.9
, pp. 331-345
-
-
Salvato, P.1
Simonato, M.2
Battisti, A.3
Negrisolo, E.4
-
48
-
-
0029877001
-
Comprehensive comparison of structural characteristics in eukaryotic cytoplasmic large subunit (23S-like) ribosomal RNA
-
Schnare, M.N., Damberger, S.H., Gray, M.W., and Gutell, R.R. (1996). Comprehensive comparison of structural characteristics in eukaryotic cytoplasmic large subunit (23S-like) ribosomal RNA. J Mol Biol 256, 701-719.
-
(1996)
J Mol Biol
, vol.256
, pp. 701-719
-
-
Schnare, M.N.1
Damberger, S.H.2
Gray, M.W.3
Gutell, R.R.4
-
49
-
-
18744397505
-
Arrangement and structural conservation of the mitochondrial control region of two species of Plecoptera: Utility of tandem repeat-containing regions in studies of population genetics and evolutionary history
-
Schultheis, A.S., Weigt, L.A., and Hendricks, A.C. (2002). Arrangement and structural conservation of the mitochondrial control region of two species of Plecoptera: utility of tandem repeat-containing regions in studies of population genetics and evolutionary history. Insect Mol Biol 11, 605-610.
-
(2002)
Insect Mol Biol
, vol.11
, pp. 605-610
-
-
Schultheis, A.S.1
Weigt, L.A.2
Hendricks, A.C.3
-
50
-
-
54149095095
-
A comparative analysis of mitochondrial genomes in Coleoptera (Arthropoda: Insecta) and genome descriptions of six new beetles
-
Sheffield, N.C., Song, H., Cameron, L., and Whiting, M.F. (2008). A comparative analysis of mitochondrial genomes in Coleoptera (Arthropoda: Insecta) and genome descriptions of six new beetles. Mol Biol Evol 25, 2499-2509.
-
(2008)
Mol Biol Evol
, vol.25
, pp. 2499-2509
-
-
Sheffield, N.C.1
Song, H.2
Cameron, L.3
Whiting, M.F.4
-
51
-
-
0028251187
-
Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain-reaction primers
-
Simon, C., Frati, F., Bekenbach, A., Crespi, B., Liu, H., and Flook P. (1994). Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain-reaction primers. Ann Entomol Soc Am 87, 651-701.
-
(1994)
Ann Entomol Soc Am
, vol.87
, pp. 651-701
-
-
Simon, C.1
Frati, F.2
Bekenbach, A.3
Crespi, B.4
Liu, H.5
Flook, P.6
-
52
-
-
0031539495
-
Michaelshaffera gen. n.-a pyraloid taxon lacking an abdominal tympanal organ (Lepidoptera: Pyralidae
-
Solis, M.A. (1997). Michaelshaffera gen. n.-a pyraloid taxon lacking an abdominal tympanal organ (Lepidoptera: Pyralidae). Entomol Scand 28, 391-402.
-
(1997)
Entomol Scand
, vol.28
, pp. 391-402
-
-
Solis, M.A.1
-
53
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihoodbased phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis, A. (2006). RAxML-VI-HPC: maximum likelihoodbased phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22, 2688-2690.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
54
-
-
0028491474
-
Structural compensation in a typical mitochondrial tRNAs
-
Steinberg, S., and Cedergren, R. (1994). Structural compensation in a typical mitochondrial tRNAs. Nat Struct Biol 1, 507-510.
-
(1994)
Nat Struct Biol
, vol.1
, pp. 507-510
-
-
Steinberg, S.1
Cedergren, R.2
-
55
-
-
0033060854
-
The mitochondrial genome: Structure, transcription, translation and replication
-
Taanman, J.W. (1999). The mitochondrial genome: structure, transcription, translation and replication. Biochim Biophys Acta 1410,103-123.
-
(1999)
Biochim Biophys Acta
, vol.1410
, pp. 103-123
-
-
Taanman, J.W.1
-
56
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28, 2731-2739.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
57
-
-
65349117585
-
The complete mitochondrial genome of Diadegma semiclausum (Hymenoptera: Ichneumonidae) indicates extensive independent evolutionary events
-
Wei, S.J., Shi, M., He, J.H., Sharkey, M.J., and Chen, X.X. (2009). The complete mitochondrial genome of Diadegma semiclausum (Hymenoptera: Ichneumonidae) indicates extensive independent evolutionary events. Genome 52, 308-319.
-
(2009)
Genome
, vol.52
, pp. 308-319
-
-
Wei, S.J.1
Shi, M.2
He, J.H.3
Sharkey, M.J.4
Chen, X.X.5
-
58
-
-
77953162605
-
The complete mitochondrial genome of Evania appendigaster (Hymenoptera: Evaniidae) has low A+ T content and a long intergenic spacer between atp8 and atp6
-
Wei, S.J., Tang, P., Zheng, L.H., Shi, M., and Chen, X.X. (2010). The complete mitochondrial genome of Evania appendigaster (Hymenoptera: Evaniidae) has low A+ T content and a long intergenic spacer between atp8 and atp6. Mol Biol Rep 37, 1931-1942.
-
(2010)
Mol Biol Rep
, vol.37
, pp. 1931-1942
-
-
Wei, S.J.1
Tang, P.2
Zheng, L.H.3
Shi, M.4
Chen, X.X.5
-
59
-
-
0027083319
-
Animal mitochondrial DNA: Structure and evolution
-
Wolstenholme, D.R. (1992). Animal mitochondrial DNA: structure and evolution. Int Rev Cytol 141,173-216.
-
(1992)
Int Rev Cytol
, vol.141
, pp. 173-216
-
-
Wolstenholme, D.R.1
-
60
-
-
67651096044
-
The complete nucleotide sequence of the mitochondrial genome of Phthonandria atrilineata (Lepidoptera: Geometridae
-
Yang, L., Wei, Z.J., Hong, G.Y., Jiang, S.T., and Wen, L.P. (2009). The complete nucleotide sequence of the mitochondrial genome of Phthonandria atrilineata (Lepidoptera: Geometridae). Mol Biol Rep 36, 1441-1449.
-
(2009)
Mol Biol Rep
, vol.36
, pp. 1441-1449
-
-
Yang, L.1
Wei, Z.J.2
Hong, G.Y.3
Jiang, S.T.4
Wen, L.P.5
-
61
-
-
77952713793
-
Complete mitochondrial genome of Teleogryllus emma (Orthoptera:- Gryllidae) with a new gene order in Orthoptera
-
Ye, W., Dang, J.P., Xie, L.D., and Huang, Y. (2008). Complete mitochondrial genome of Teleogryllus emma (Orthoptera:-Gryllidae) with a new gene order in Orthoptera. Zoolog Res 29, 236-244.
-
(2008)
Zoolog Res
, vol.29
, pp. 236-244
-
-
Ye, W.1
Dang, J.P.2
Xie, L.D.3
Huang, Y.4
-
62
-
-
0036667701
-
Significant levels of sequence divergence and gene rearrangements have occurred between the mitochondrial genomes of the wild mulberry silkmoth, Bombyx mandarina, and its close relative, the domesticated silkmoth, Bombyx mori
-
Yukuhiro, K., Sezutsu, H., Itoh, M., Shimizu, K., and Banno, Y. (2002). Significant levels of sequence divergence and gene rearrangements have occurred between the mitochondrial genomes of the wild mulberry silkmoth, Bombyx mandarina, and its close relative, the domesticated silkmoth, Bombyx mori. Mol Biol Evol 19, 1385-1389.
-
(2002)
Mol Biol Evol
, vol.19
, pp. 1385-1389
-
-
Yukuhiro, K.1
Sezutsu, H.2
Itoh, M.3
Shimizu, K.4
Banno, Y.5
-
63
-
-
0028909805
-
Evolution and structural conservation of the control region of insect mitochondrial DNA
-
Zhang, D.X., Szymura, J.M., and Hewitt, G.M. (1995). Evolution and structural conservation of the control region of insect mitochondrial DNA. J Mol Evol 40, 382-391.
-
(1995)
J Mol Evol
, vol.40
, pp. 382-391
-
-
Zhang, D.X.1
Szymura, J.M.2
Hewitt, G.M.3
-
64
-
-
80052442439
-
The complete mitochondrial genome of Spilonota lechriaspis Meyrick (Lepidoptera: Tortricidae
-
Zhao, J.L., Zhang, Y.Y., Luo, A.R., Jiang, G.F., Cameron, S.L., and Zhu, C.D. (2010). The complete mitochondrial genome of Spilonota lechriaspis Meyrick (Lepidoptera: Tortricidae). Mol Biol Rep 38, 3757-3764.
-
(2010)
Mol Biol Rep
, vol.38
, pp. 3757-3764
-
-
Zhao, J.L.1
Zhang, Y.Y.2
Luo, A.R.3
Jiang, G.F.4
Cameron, S.L.5
Zhu, C.D.6
-
65
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker, M. (2003). Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31, 3406-3415.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|