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Volumn 7, Issue 9, 2012, Pages

NAP1-Assisted Nucleosome Assembly on DNA Measured in Real Time by Single-Molecule Magnetic Tweezers

Author keywords

[No Author keywords available]

Indexed keywords

DNA; DOUBLE STRANDED DNA; HISTONE H3; HISTONE H4; NUCLEOSOME ASSEMBLY PROTEIN 1;

EID: 84866721910     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0046306     Document Type: Article
Times cited : (31)

References (41)
  • 1
    • 0017331464 scopus 로고
    • Structure of chromatin
    • Kornberg RD, (1977) Structure of chromatin. Ann Rev Biochem 46: 931-954.
    • (1977) Ann Rev Biochem , vol.46 , pp. 931-954
    • Kornberg, R.D.1
  • 2
    • 1842411320 scopus 로고    scopus 로고
    • Crystal structure of the nucleosome core particle at 2.8 A resolution
    • Luger K, Mäder AW, Richmond RK, Sargent DF, Richmond TJ, (1997) Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature 389: 251-260.
    • (1997) Nature , vol.389 , pp. 251-260
    • Luger, K.1    Mäder, A.W.2    Richmond, R.K.3    Sargent, D.F.4    Richmond, T.J.5
  • 4
    • 0019984769 scopus 로고
    • Role of histone pairs H2A,H2B and H3,H4 in the self-assembly of nucleosome core particles
    • Daban JR, Cantor CR, (1982) Role of histone pairs H2A,H2B and H3,H4 in the self-assembly of nucleosome core particles. Journal of molecular biology 156: 771-789.
    • (1982) Journal of Molecular Biology , vol.156 , pp. 771-789
    • Daban, J.R.1    Cantor, C.R.2
  • 5
    • 0026079369 scopus 로고
    • Stepwise assembly of chromatin during DNA replication in vitro
    • Smith S, Stillman B, (1991) Stepwise assembly of chromatin during DNA replication in vitro. The EMBO journal 10: 971-980.
    • (1991) The EMBO Journal , vol.10 , pp. 971-980
    • Smith, S.1    Stillman, B.2
  • 7
    • 0018782954 scopus 로고
    • H3.H4 tetramer directs DNA and core histone octamer assembly in the nucleosome core particle
    • Jorcano JL, Ruiz-Carrillo A, (1979) H3.H4 tetramer directs DNA and core histone octamer assembly in the nucleosome core particle. Biochemistry 18: 768-774.
    • (1979) Biochemistry , vol.18 , pp. 768-774
    • Jorcano, J.L.1    Ruiz-Carrillo, A.2
  • 8
    • 0024372060 scopus 로고
    • Purification and characterization of CAF-I, a human cell factor required for chromatin assembly during DNA replication in vitro
    • Smith S, Stillman B, (1989) Purification and characterization of CAF-I, a human cell factor required for chromatin assembly during DNA replication in vitro. Cell 58: 15-25.
    • (1989) Cell , vol.58 , pp. 15-25
    • Smith, S.1    Stillman, B.2
  • 9
  • 10
    • 0029946736 scopus 로고    scopus 로고
    • Drosophila NAP-1 is a core histone chaperone that functions in ATP-facilitated assembly of regularly spaced nucleosomal arrays
    • Ito T, Bulger M, Kobayashi R, Kadonaga JT, (1996) Drosophila NAP-1 is a core histone chaperone that functions in ATP-facilitated assembly of regularly spaced nucleosomal arrays. Molecular and cellular biology 16: 3112-3124.
    • (1996) Molecular and Cellular Biology , vol.16 , pp. 3112-3124
    • Ito, T.1    Bulger, M.2    Kobayashi, R.3    Kadonaga, J.T.4
  • 12
    • 0035920211 scopus 로고    scopus 로고
    • Multistep chromatin assembly on supercoiled plasmid DNA by nucleosome assembly protein-1 and ATP-utilizing chromatin assembly and remodeling factor
    • Nakagawa T, Bulger M, Muramatsu M, Ito T, (2001) Multistep chromatin assembly on supercoiled plasmid DNA by nucleosome assembly protein-1 and ATP-utilizing chromatin assembly and remodeling factor. The Journal of biological chemistry 276: 27384-27391.
    • (2001) The Journal of Biological Chemistry , vol.276 , pp. 27384-27391
    • Nakagawa, T.1    Bulger, M.2    Muramatsu, M.3    Ito, T.4
  • 14
    • 22044436367 scopus 로고    scopus 로고
    • Forced unraveling of nucleosomes assembled on heterogeneous DNA using core histones, NAP-1, and ACF
    • Gemmen GJ, Sim R, Haushalter Ka, Ke PC, Kadonaga JT, et al. (2005) Forced unraveling of nucleosomes assembled on heterogeneous DNA using core histones, NAP-1, and ACF. Journal of molecular biology 351: 89-99.
    • (2005) Journal of Molecular Biology , vol.351 , pp. 89-99
    • Gemmen, G.J.1    Sim, R.2    Haushalter, K.3    Ke, P.C.4    Kadonaga, J.T.5
  • 17
    • 70350435635 scopus 로고    scopus 로고
    • 10 Years of Tension on Chromatin: Results From Single Molecule Force Spectroscopy
    • Chien F-T, van Noort J, (2009) 10 Years of Tension on Chromatin: Results From Single Molecule Force Spectroscopy. Current pharmaceutical biotechnology 10: 474-485.
    • (2009) Current Pharmaceutical Biotechnology , vol.10 , pp. 474-485
    • Chien, F.-T.1    van Noort, J.2
  • 19
    • 0031564634 scopus 로고    scopus 로고
    • Measurement of the linking number change in transcribing chromatin
    • Drabik CE, Nicita C, Lutter LC, (1997) Measurement of the linking number change in transcribing chromatin. Journal of molecular biology 267: 794-806.
    • (1997) Journal of Molecular Biology , vol.267 , pp. 794-806
    • Drabik, C.E.1    Nicita, C.2    Lutter, L.C.3
  • 20
    • 0037040974 scopus 로고    scopus 로고
    • Biochemical analysis of chromatin containing recombinant Drosophila core histones
    • Levenstein ME, Kadonaga JT, (2002) Biochemical analysis of chromatin containing recombinant Drosophila core histones. The Journal of biological chemistry 277: 8749-8754.
    • (2002) The Journal of Biological Chemistry , vol.277 , pp. 8749-8754
    • Levenstein, M.E.1    Kadonaga, J.T.2
  • 26
    • 73449148377 scopus 로고    scopus 로고
    • Nucleosome assembly depends on the torsion in the DNA molecule: a magnetic tweezers study
    • Gupta P, Zlatanova J, Tomschik M, (2009) Nucleosome assembly depends on the torsion in the DNA molecule: a magnetic tweezers study. Biophysical journal 97: 3150-3157.
    • (2009) Biophysical Journal , vol.97 , pp. 3150-3157
    • Gupta, P.1    Zlatanova, J.2    Tomschik, M.3
  • 30
    • 0022234831 scopus 로고
    • Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: a model system for study of higher order structure
    • Simpson RT, Thoma F, Brubaker JM, (1985) Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: a model system for study of higher order structure. Cell 42: 799-808.
    • (1985) Cell , vol.42 , pp. 799-808
    • Simpson, R.T.1    Thoma, F.2    Brubaker, J.M.3
  • 32
    • 0024503977 scopus 로고
    • Histone acetylation reduces nucleosome core particle linking number change
    • Norton VG, Imai BS, Yau P, Bradbury EM, (1989) Histone acetylation reduces nucleosome core particle linking number change. Cell 57: 449-457.
    • (1989) Cell , vol.57 , pp. 449-457
    • Norton, V.G.1    Imai, B.S.2    Yau, P.3    Bradbury, E.M.4
  • 33
    • 80051748137 scopus 로고    scopus 로고
    • Identification of a Rapidly Formed Nonnucleosomal Histone-DNA Intermediate that Is Converted into Chromatin by ACF
    • Torigoe SE, Urwin DL, Ishii H, Smith DE, Kadonaga JT, (2011) Identification of a Rapidly Formed Nonnucleosomal Histone-DNA Intermediate that Is Converted into Chromatin by ACF. Molecular Cell 43: 638-648.
    • (2011) Molecular Cell , vol.43 , pp. 638-648
    • Torigoe, S.E.1    Urwin, D.L.2    Ishii, H.3    Smith, D.E.4    Kadonaga, J.T.5
  • 34
    • 84866700862 scopus 로고    scopus 로고
    • Craig John Benham, Stephen Harvey, Wilma K. Olson DWS and DS, editor New York, NY: Springer
    • Sivolob A, Lavelle C, Prunell A (2009) FLEXIBILITY OF NUCLEOSOMES ON. Craig John Benham, Stephen Harvey, Wilma K. Olson DWS and DS, editor New York, NY: Springer. p. 251-291.
    • (2009) FLEXIBILITY OF NUCLEOSOMES ON , pp. 251-291
    • Sivolob, A.1    Lavelle, C.2    Prunell, A.3
  • 35
    • 0033593241 scopus 로고    scopus 로고
    • Nucleosome dynamics. III. Histone tail-dependent fluctuation of nucleosomes between open and closed DNA conformations. Implications for chromatin dynamics and the linking number paradox. A relaxation study of mononucleosomes on DNA minicircles
    • De Lucia F, Alilat M, Sivolob A, Prunell A, (1999) Nucleosome dynamics. III. Histone tail-dependent fluctuation of nucleosomes between open and closed DNA conformations. Implications for chromatin dynamics and the linking number paradox. A relaxation study of mononucleosomes on DNA minicircles. Journal of molecular biology 285: 1101-1119.
    • (1999) Journal of Molecular Biology , vol.285 , pp. 1101-1119
    • de Lucia, F.1    Alilat, M.2    Sivolob, A.3    Prunell, A.4
  • 37
    • 79951484009 scopus 로고    scopus 로고
    • The histone chaperones Nap1 and Vps75 bind histones H3 and H4 in a tetrameric conformation
    • Bowman A, Ward R, Wiechens N, Singh V, El-Mkami H, et al. (2011) The histone chaperones Nap1 and Vps75 bind histones H3 and H4 in a tetrameric conformation. Molecular cell 41: 398-408.
    • (2011) Molecular Cell , vol.41 , pp. 398-408
    • Bowman, A.1    Ward, R.2    Wiechens, N.3    Singh, V.4    El-Mkami, H.5
  • 38
    • 77449157577 scopus 로고    scopus 로고
    • Probing the (H3-H4)2 histone tetramer structure using pulsed EPR spectroscopy combined with site-directed spin labelling
    • Bowman A, Ward R, El-Mkami H, Owen-Hughes T, Norman DG, (2010) Probing the (H3-H4)2 histone tetramer structure using pulsed EPR spectroscopy combined with site-directed spin labelling. Nucleic acids research 38: 695-707.
    • (2010) Nucleic Acids Research , vol.38 , pp. 695-707
    • Bowman, A.1    Ward, R.2    El-Mkami, H.3    Owen-Hughes, T.4    Norman, D.G.5
  • 39
    • 0029821228 scopus 로고    scopus 로고
    • Interaction of the histone (H3-H4)2 tetramer of the nucleosome with positively supercoiled DNA minicircles: Potential flipping of the protein from a left- to a right-handed superhelical form
    • Hamiche A, Carot V, Alilat M, De Lucia F, O'Donohue MF, et al. (1996) Interaction of the histone (H3-H4)2 tetramer of the nucleosome with positively supercoiled DNA minicircles: Potential flipping of the protein from a left- to a right-handed superhelical form. Proceedings of the National Academy of Sciences of the United States of America 93: 7588-7593.
    • (1996) Proceedings of the National Academy of Sciences of the United States of America , vol.93 , pp. 7588-7593
    • Hamiche, A.1    Carot, V.2    Alilat, M.3    de Lucia, F.4    O'Donohue, M.F.5
  • 40
    • 0032502688 scopus 로고    scopus 로고
    • The switch in the helical handedness of the histone (H3-H4)2 tetramer within a nucleoprotein particle requires a reorientation of the H3-H3 interface
    • Hamiche A, Richard-Foy H, (1998) The switch in the helical handedness of the histone (H3-H4)2 tetramer within a nucleoprotein particle requires a reorientation of the H3-H3 interface. The Journal of biological chemistry 273: 9261-9269.
    • (1998) The Journal of Biological Chemistry , vol.273 , pp. 9261-9269
    • Hamiche, A.1    Richard-Foy, H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.