-
1
-
-
13044279382
-
-
Springer-Verlag, New York
-
VanHolde, K.E. Chromatin (Springer-Verlag, New York, 1988).
-
(1988)
Chromatin
-
-
VanHolde, K.E.1
-
2
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 A resolution
-
Luger, K., Mader, A.W., Richmond, R.K., Sargent, D.F. & Richmond, T.J. Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature 389, 251-260 (1997).
-
(1997)
Nature
, vol.389
, pp. 251-260
-
-
Luger, K.1
Mader, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
3
-
-
0842302172
-
Folding of the DNA double helix in chromatin-like structures from simian virus 40
-
Germond, J.E., Hirt, B., Oudet, P., Gross-Bellark, M. & Chambon, P. Folding of the DNA double helix in chromatin-like structures from simian virus 40. Proc. Natl. Acad. Sci. USA 72, 1843-1847 (1975).
-
(1975)
Proc. Natl. Acad. Sci. USA
, vol.72
, pp. 1843-1847
-
-
Germond, J.E.1
Hirt, B.2
Oudet, P.3
Gross-Bellark, M.4
Chambon, P.5
-
4
-
-
0004050816
-
-
Academic Press, London
-
Wolffe, A. Chromatin (Academic Press, London, 1998).
-
(1998)
Chromatin
-
-
Wolffe, A.1
-
5
-
-
0034602688
-
Pulling a single chromatin fiber reveals the forces that maintain its higher-order structure
-
Cui, Y. & Bustamante, C. Pulling a single chromatin fiber reveals the forces that maintain its higher-order structure. Proc. Natl. Acad. Sci. USA 97, 127-132 (2000).
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 127-132
-
-
Cui, Y.1
Bustamante, C.2
-
6
-
-
0037133348
-
Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA
-
Brower-Toland, B.D. et al. Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA. Proc. Natl. Acad. Sci. USA 99, 1960-1965 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 1960-1965
-
-
Brower-Toland, B.D.1
-
7
-
-
0037133216
-
New insights into unwrapping DNA from the nucleosome from a single-molecule optical tweezers method
-
Hayes, J.J. & Hansen, J.C. New insights into unwrapping DNA from the nucleosome from a single-molecule optical tweezers method. Proc. Natl. Acad. Sci. USA 99, 1752-1754 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 1752-1754
-
-
Hayes, J.J.1
Hansen, J.C.2
-
8
-
-
0029937922
-
The elasticity of a single supercoiled DNA molecule
-
Strick, T.R., Allemand, J.F., Bensimon, D., Bensimon, A. & Croquette, V. The elasticity of a single supercoiled DNA molecule. Science 271, 1835-1837 (1996).
-
(1996)
Science
, vol.271
, pp. 1835-1837
-
-
Strick, T.R.1
Allemand, J.F.2
Bensimon, D.3
Bensimon, A.4
Croquette, V.5
-
9
-
-
0022234831
-
Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: A model system for study of higher order structure
-
Simpson, R.T., Thoma, F. & Brubaker, J.M. Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: a model system for study of higher order structure. Cell 42, 799-808 (1985).
-
(1985)
Cell
, vol.42
, pp. 799-808
-
-
Simpson, R.T.1
Thoma, F.2
Brubaker, J.M.3
-
10
-
-
34250169198
-
Paradox lost: Nucleosome structure and dynamics by the DNA minicircle approach
-
eds. Zlatanova, J. & Leuba, S.H. Elsevier, London
-
Prunell, A. & Sivolob, A. Paradox lost: nucleosome structure and dynamics by the DNA minicircle approach. in Chromatin Structure and Dynamics: State-of-the-Art Vol. 39 (eds. Zlatanova, J. & Leuba, S.H.) 45-73 (Elsevier, London, 2004).
-
(2004)
Chromatin Structure and Dynamics: State-of-the-Art
, vol.39
, pp. 45-73
-
-
Prunell, A.1
Sivolob, A.2
-
11
-
-
2942596544
-
Network of dynamic interactions between histone H1 and high-mobility-group proteins in chromatin
-
Catez, F. et al. Network of dynamic interactions between histone H1 and high-mobility-group proteins in chromatin. Mol. Cell. Biol. 24, 4321-4328 (2004).
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 4321-4328
-
-
Catez, F.1
-
12
-
-
3042760021
-
Global nature of dynamic protein-chromatin interactions in vivo: Three-dimensional genome scanning and dynamic interaction networks of chromatin proteins
-
Phair, R.D. et al. Global nature of dynamic protein-chromatin interactions in vivo: three-dimensional genome scanning and dynamic interaction networks of chromatin proteins. Mol. Cell. Biol. 24, 6393-6402 (2004).
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 6393-6402
-
-
Phair, R.D.1
-
13
-
-
0242497812
-
Preferential binding of the histone (H3-H4)2 tetramer by NAP1 is mediated by the amino-terminal histone tails
-
McBryant, S.J. et al. Preferential binding of the histone (H3-H4)2 tetramer by NAP1 is mediated by the amino-terminal histone tails. J. Biol. Chem. 278, 44574-44583 (2003).
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 44574-44583
-
-
McBryant, S.J.1
-
14
-
-
0027960444
-
Three-dimensional structure of extended chromatin fibers as revealed by tapping-mode scanning force microscopy
-
Leuba, S.H. et al. Three-dimensional structure of extended chromatin fibers as revealed by tapping-mode scanning force microscopy. Proc. Natl. Acad. Sci. USA 91, 11621-11625 (1994).
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 11621-11625
-
-
Leuba, S.H.1
-
15
-
-
11744306627
-
Elasticity model of a supercoiled DNA molecule
-
Bouchiat, C. & Mezard, M. Elasticity model of a supercoiled DNA molecule. Phys. Rev. Lett. 80, 1556-1559 (1998).
-
(1998)
Phys. Rev. Lett.
, vol.80
, pp. 1556-1559
-
-
Bouchiat, C.1
Mezard, M.2
-
16
-
-
0035509641
-
Chromatin: A tunable spring at work inside chromosomes
-
Ben-Haim, E., Lesne, A. & Victor, J.M. Chromatin: a tunable spring at work inside chromosomes. Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 64, 051921 (2001).
-
(2001)
Phys. Rev. E Stat. Nonlin. Soft Matter Phys.
, vol.64
, pp. 051921
-
-
Ben-Haim, E.1
Lesne, A.2
Victor, J.M.3
-
17
-
-
0035066656
-
DNA folding: Structural and mechanical properties of the two-angle model for chromatin
-
Schiessel, H., Gelbart, W.M. & Bruinsma, R. DNA folding: structural and mechanical properties of the two-angle model for chromatin. Biophys. J. 80, 1940-1956 (2001).
-
(2001)
Biophys. J.
, vol.80
, pp. 1940-1956
-
-
Schiessel, H.1
Gelbart, W.M.2
Bruinsma, R.3
-
18
-
-
0027517831
-
A chromatin folding model that incorporates linker variability generates fibers resembling native structures
-
Woodcock, C.L., Grigoriev, S.A., Horowitz, R.A. & Whitaker, N. A chromatin folding model that incorporates linker variability generates fibers resembling native structures. Proc. Natl. Acad. Sci. USA 90, 9021-9025 (1993).
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 9021-9025
-
-
Woodcock, C.L.1
Grigoriev, S.A.2
Horowitz, R.A.3
Whitaker, N.4
-
19
-
-
41349087453
-
How the chromatin fiber deals with topological constraints?
-
Barbi, M., Mozziconacci, J. & Victor, J.M. How the chromatin fiber deals with topological constraints? Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 71, 031910 (2005).
-
(2005)
Phys. Rev. E Stat. Nonlin. Soft Matter Phys.
, vol.71
, pp. 031910
-
-
Barbi, M.1
Mozziconacci, J.2
Victor, J.M.3
-
20
-
-
21844436803
-
X-ray structure of a tetranucleosome and its implications for the chromatin fiber
-
Schalch, T., Duda, S., Sargent, D.F. & Richmond, T.J. X-ray structure of a tetranucleosome and its implications for the chromatin fiber. Nature 436, 138-141 (2005).
-
(2005)
Nature
, vol.436
, pp. 138-141
-
-
Schalch, T.1
Duda, S.2
Sargent, D.F.3
Richmond, T.J.4
-
21
-
-
0033593241
-
Nucleosome dynamics. III. Histone tail-dependent fluctuation of nucleosomes between open and closed DNA conformations. Implications for chromatin dynamics and the linking number paradox. A relaxation study of mononucleosomes on DNA minicircles
-
De Lucia, F., Alilat, M., Sivolob, A. & Prunell, A. Nucleosome dynamics. III. Histone tail-dependent fluctuation of nucleosomes between open and closed DNA conformations. Implications for chromatin dynamics and the linking number paradox. A relaxation study of mononucleosomes on DNA minicircles. J. Mol. Biol. 285, 1101-1119 (1999).
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 1101-1119
-
-
De Lucia, F.1
Alilat, M.2
Sivolob, A.3
Prunell, A.4
-
22
-
-
0032564478
-
Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher order folding and compaction of chromatin
-
Bednar, J. et al. Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher order folding and compaction of chromatin. Proc. Natl. Acad. Sci. USA 95, 14173-14178 (1998).
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 14173-14178
-
-
Bednar, J.1
-
23
-
-
0024292430
-
Chromatin reconstitution on small DNA rings. I
-
Goulet, I., Zivanovic, Y., Prunell, A. & Revet, B. Chromatin reconstitution on small DNA rings. I. J. Mol. Biol. 200, 253-266 (1988).
-
(1988)
J. Mol. Biol.
, vol.200
, pp. 253-266
-
-
Goulet, I.1
Zivanovic, Y.2
Prunell, A.3
Revet, B.4
-
25
-
-
0033593369
-
Nucleosome dynamics. II. High flexibility of nucleosome entering and exiting DNAs to positive crossing. An ethidium bromide fluorescence study of mononucleosomes on DNA minicircles
-
Sivolob, A., De Lucia, F., Revet, B. & Prunell, A. Nucleosome dynamics. II. High flexibility of nucleosome entering and exiting DNAs to positive crossing. An ethidium bromide fluorescence study of mononucleosomes on DNA minicircles. J. Mol. Biol. 285, 1081-1099 (1999).
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 1081-1099
-
-
Sivolob, A.1
De Lucia, F.2
Revet, B.3
Prunell, A.4
-
26
-
-
0037423733
-
Sequence-dependent nucleosome structural and dynamic polymorphism. Potential involvement of histone H2B N-terminal tail proximal domain
-
Sivolob, A., Lavelle, C. & Prunell, A. Sequence-dependent nucleosome structural and dynamic polymorphism. Potential involvement of histone H2B N-terminal tail proximal domain. J. Mol. Biol. 326, 49-63 (2003).
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 49-63
-
-
Sivolob, A.1
Lavelle, C.2
Prunell, A.3
-
27
-
-
0042622604
-
Linker histone-dependent organization and dynamics of nucleome entry/exit DNAs
-
Sivolob, A. & Prunell, A. Linker histone-dependent organization and dynamics of nucleome entry/exit DNAs. J. Mol. Biol. 331, 1025-1040 (2003).
-
(2003)
J. Mol. Biol.
, vol.331
, pp. 1025-1040
-
-
Sivolob, A.1
Prunell, A.2
-
28
-
-
0035804245
-
Direct observation of DNA rotation during transcription by Escherichia coli RNA polymerase
-
Harada, Y. et al. Direct observation of DNA rotation during transcription by Escherichia coli RNA polymerase. Nature 409, 113-115 (2001).
-
(2001)
Nature
, vol.409
, pp. 113-115
-
-
Harada, Y.1
-
30
-
-
0027200062
-
Knotting of a DNA chain during ring closure
-
Shaw, S.Y. & Wang, J.C. Knotting of a DNA chain during ring closure. Science 260, 533-536 (1993).
-
(1993)
Science
, vol.260
, pp. 533-536
-
-
Shaw, S.Y.1
Wang, J.C.2
-
31
-
-
0035810935
-
Preferential interreaction of the core histone tail domains with linker DNA
-
Angelov, D., Vitolo, J.M., Mutskov, V., Dimitrov, S. & Hayes, J.J. Preferential interreaction of the core histone tail domains with linker DNA. Proc. Natl. Acad. Sci. USA 98, 6599-6604 (2001).
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 6599-6604
-
-
Angelov, D.1
Vitolo, J.M.2
Mutskov, V.3
Dimitrov, S.4
Hayes, J.J.5
-
32
-
-
0019878241
-
The helical periodicity of DNA on the nucleosome
-
Klug, A. & Lutter, L.C. The helical periodicity of DNA on the nucleosome. Nucleic Acids Res. 9, 4267-4283 (1981).
-
(1981)
Nucleic Acids Res.
, vol.9
, pp. 4267-4283
-
-
Klug, A.1
Lutter, L.C.2
-
33
-
-
0031957859
-
A topological approach to nucleosome structure and dynamics: The linking number paradox and other issues
-
Prunell, A. A topological approach to nucleosome structure and dynamics: the linking number paradox and other issues. Biophys. J. 74, 2531-2544 (1998).
-
(1998)
Biophys. J.
, vol.74
, pp. 2531-2544
-
-
Prunell, A.1
-
34
-
-
0024503977
-
Histone acetylation reduces nucleosome core particle linking number change
-
Norton, V.G., Imai, B.S., Yau, P. & Bradbury, E.M. Histone acetylation reduces nucleosome core particle linking number change. Cell 57, 449-457 (1989).
-
(1989)
Cell
, vol.57
, pp. 449-457
-
-
Norton, V.G.1
Imai, B.S.2
Yau, P.3
Bradbury, E.M.4
-
35
-
-
0346380962
-
Effects of DNA supercoiling on the topological properties of nucleosomes
-
Garner, M. M., Felsenfeld, G., O'Dea, M. H. & Gellert, M. Effects of DNA supercoiling on the topological properties of nucleosomes. Proc. Natl. Acad. Sci. USA 84, 2620-2623 (1987).
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 2620-2623
-
-
Garner, M.M.1
Felsenfeld, G.2
O'Dea, M.H.3
Gellert, M.4
-
36
-
-
0027495603
-
Effect of positive supercoiling on DNA compaction by nucleosome cores
-
Clark, D.J., Ghirlando, R., Felsenfeld, G. & Eisenberg, H. Effect of positive supercoiling on DNA compaction by nucleosome cores. J. Mol. Biol. 234, 297-301 (1993).
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 297-301
-
-
Clark, D.J.1
Ghirlando, R.2
Felsenfeld, G.3
Eisenberg, H.4
-
37
-
-
0034649663
-
Dynamic binding of histone H1 to chromatin in live cells
-
Misteli, T., Gunjan, A., Hock, R., Bustin, M. & Brown, D.T. Dynamic binding of histone H1 to chromatin in live cells. Nature 408, 877-881 (2000).
-
(2000)
Nature
, vol.408
, pp. 877-881
-
-
Misteli, T.1
Gunjan, A.2
Hock, R.3
Bustin, M.4
Brown, D.T.5
-
38
-
-
0023433855
-
Supercoiling of the DNA template during transcription
-
Liu, L.F. & Wang, J.C. Supercoiling of the DNA template during transcription. Proc. Natl. Acad. Sci. USA 84, 7024-7027 (1987).
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 7024-7027
-
-
Liu, L.F.1
Wang, J.C.2
-
39
-
-
14644388222
-
The dynamics of histone H1 function in chromatin
-
Bustin, M., Catez, F. & Lim, J.H. The dynamics of histone H1 function in chromatin. Mol. Cell 17, 617-620 (2005).
-
(2005)
Mol. Cell
, vol.17
, pp. 617-620
-
-
Bustin, M.1
Catez, F.2
Lim, J.H.3
-
40
-
-
0027412701
-
Assembly and structural properties of subsaturated chromatin arrays
-
Hansen, J.C. & Lohr, D. Assembly and structural properties of subsaturated chromatin arrays. J. Biol. Chem. 268, 5840-5848 (1993).
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 5840-5848
-
-
Hansen, J.C.1
Lohr, D.2
-
41
-
-
16644374792
-
Twisting and untwisting a single DNA molecule covered by RecA protein
-
Fulconis, R. et al. Twisting and untwisting a single DNA molecule covered by RecA protein. Biophys. J. 87, 2552-2563 (2004).
-
(2004)
Biophys. J.
, vol.87
, pp. 2552-2563
-
-
Fulconis, R.1
-
42
-
-
0026642219
-
Mobile nucleosomes-a general behavior
-
Meersseman, G., Pennings, S. & Bradbury, E.M. Mobile nucleosomes-a general behavior. EMBO J. 11, 2951-2959 (1992).
-
(1992)
EMBO J.
, vol.11
, pp. 2951-2959
-
-
Meersseman, G.1
Pennings, S.2
Bradbury, E.M.3
-
43
-
-
0037379723
-
X-ray diffraction characterization of the dense phases formed by nucleosome core particles
-
Mangenot, S., Leforestier, A., Durand, D. & Livolant, F. X-ray diffraction characterization of the dense phases formed by nucleosome core particles. Biophys. J. 84, 2570-2584 (2003).
-
(2003)
Biophys. J.
, vol.84
, pp. 2570-2584
-
-
Mangenot, S.1
Leforestier, A.2
Durand, D.3
Livolant, F.4
|