-
6
-
-
0033954256
-
-
10.1093/nar/28.1.235 1:CAS:528:DC%2BD3cXhvVKjt7w%3D
-
H. M. Berman J. Westbrook Z. Feng G. Gilliland T. N. Bhat H. Weissig I. N. Shindyalov P. E. Bourne 2000 Nucleic Acids Res. 28 235 10.1093/nar/28.1.235 1:CAS:528:DC%2BD3cXhvVKjt7w%3D
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
7
-
-
84865474878
-
-
A. R. Khokhlov (eds). USSR Moscow. [Computer Modeling Methods for Investigation of Polymers and Biopolymers]
-
A. V. Nemukhin, S. V. Lushchekina, S. D. Varfolomeev, in Metody komp'yuternogo modelirovaniya dlya issledovaniya polimerov i biopolimerov [Computer Modeling Methods for Investigation of Polymers and Biopolymers], Ed. A. R. Khokhlov, USSR, Moscow, 2009, p. 17 (in Russian).
-
(2009)
Metody Komp'yuternogo Modelirovaniya Dlya Issledovaniya Polimerov i Biopolimerov
, pp. 17
-
-
Nemukhin, A.V.1
Lushchekina, S.V.2
Varfolomeev, S.D.3
-
8
-
-
34047191046
-
QM/MM studies of enzymes
-
DOI 10.1016/j.cbpa.2007.01.684, PII S136759310700021X
-
H. M. Senn W. Thiel 2007 Curr. Opin. Chem. Biol. 11 182 10.1016/j.cbpa.2007.01.684 1:CAS:528:DC%2BD2sXjvFegurw%3D (Pubitemid 46528365)
-
(2007)
Current Opinion in Chemical Biology
, vol.11
, Issue.2
, pp. 182-187
-
-
Senn, H.M.1
Thiel, W.2
-
9
-
-
60349127442
-
-
10.1002/anie.200802019 1:CAS:528:DC%2BD1MXitFOqs7g%3D
-
H. M. Senn W. Thiel 2009 Angew. Chem. Int. Ed. Engl. 48 1198 10.1002/anie.200802019 1:CAS:528:DC%2BD1MXitFOqs7g%3D
-
(2009)
Angew. Chem. Int. Ed. Engl.
, vol.48
, pp. 1198
-
-
Senn, H.M.1
Thiel, W.2
-
10
-
-
33845282579
-
-
10.1021/cr00081a005 1:CAS:528:DyaL2sXlsV2kurs%3D
-
D. M. Quinn 1987 Chem. Rev. 87 955 10.1021/cr00081a005 1:CAS:528:DyaL2sXlsV2kurs%3D
-
(1987)
Chem. Rev.
, vol.87
, pp. 955
-
-
Quinn, D.M.1
-
13
-
-
0034607435
-
Transition state structure and rate determination for the acylation stage of acetylcholinesterase catalyzed hydrolysis of (acetylthio)choline
-
DOI 10.1021/ja9933590
-
S. Malany M. Sawai R. S. Sikorski J. Seravalli D. M. Quinn Z. Radic P. Taylor C. Kronman B. Velan A. Shafferman 2000 J. Am. Chem. Soc. 122 2981 10.1021/ja9933590 1:CAS:528:DC%2BD3cXhs12mtro%3D (Pubitemid 30207824)
-
(2000)
Journal of the American Chemical Society
, vol.122
, Issue.13
, pp. 2981-2987
-
-
Malany, S.1
Sawai, M.2
Sikorski, R.S.3
Seravalli, J.4
Quinn, D.M.5
Radic, Z.6
Taylor, P.7
Kronman, C.8
Velan, B.9
Shafferman, A.10
-
15
-
-
0026733022
-
-
1:CAS:528:DyaK38XkvVGru7o%3D
-
A. Shafferman C. Kronman Y. Flashner M. Leitner H. Grosfeld A. Ordentlich Y. Gozes S. Cohen N. Ariel D. Barak 1992 J. Biol. Chem. 267 17640 1:CAS:528:DyaK38XkvVGru7o%3D
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 17640
-
-
Shafferman, A.1
Kronman, C.2
Flashner, Y.3
Leitner, M.4
Grosfeld, H.5
Ordentlich, A.6
Gozes, Y.7
Cohen, S.8
Ariel, N.9
Barak, D.10
-
16
-
-
84865499768
-
-
S. D. Varfolomeev (eds). Rossiiskii universitet druzhby narodov Moscow. [Human Molecular Polymorphism]
-
S. D. Varfolomeev, I. N. Kurochkin, I. A. Gariev, in Molekulyarnyi polimorfizm cheloveka [Human Molecular Polymorphism], Ed. S. D. Varfolomeev, Rossiiskii universitet druzhby narodov, Moscow, 2007, p. 203 (in Russian).
-
(2007)
Molekulyarnyi Polimorfizm Cheloveka
, pp. 203
-
-
Varfolomeev, S.D.1
Kurochkin, I.N.2
Gariev, I.A.3
-
18
-
-
65549150767
-
-
[Dokl. Chem. (Engl. Transl.), 2009, 426]
-
S. V. Lushchekina A. V. Nemukhin D. I. Morozov S. D. Varfolomeev 2009 Dokl. AN 426 344 [Dokl. Chem. (Engl. Transl.), 2009, 426]
-
(2009)
Dokl. AN
, vol.426
, pp. 344
-
-
Lushchekina, S.V.1
Nemukhin, A.V.2
Morozov, D.I.3
Varfolomeev, S.D.4
-
20
-
-
77955917224
-
-
[Russ. Chem. Bull., Int. Ed., 2010, 56, 55]
-
S. V. Lushchekina, B. L. Grigorenko, D. I. Morozov, I. V. Polyakov, A. V. Nemukhin, S. D. Varfolomeev, Izv. Akad. Nauk. Ser. Khim., 2010, 56 [Russ. Chem. Bull., Int. Ed., 2010, 56, 55].
-
(2010)
Izv. Akad. Nauk. Ser. Khim.
, pp. 56
-
-
Lushchekina, S.V.1
Grigorenko, B.L.2
Morozov, D.I.3
Polyakov, I.V.4
Nemukhin, A.V.5
Varfolomeev, S.D.6
-
21
-
-
0021126688
-
-
1:CAS:528:DyaL2cXmt1Gltbg%3D
-
H. Froede I. Wilson 1984 J. Biol. Chem. 259 11010 1:CAS:528: DyaL2cXmt1Gltbg%3D
-
(1984)
J. Biol. Chem.
, vol.259
, pp. 11010
-
-
Froede, H.1
Wilson, I.2
-
22
-
-
0035873095
-
Short, strong hydrogen bonds at the active site of human acetylcholinesterase: Proton NMR studies
-
DOI 10.1021/bi010243j
-
M. A. Massiah C. Viragh P. M. Reddy I. M. Kovach J. Johnson T. L. Rosenberry A. S. Mildvan 2001 Biochemistry 40 5682 10.1021/bi010243j 1:CAS:528:DC%2BD3MXivVCgs78%3D (Pubitemid 32440872)
-
(2001)
Biochemistry
, vol.40
, Issue.19
, pp. 5682-5690
-
-
Massiah, M.A.1
Viragh, C.2
Reddy, P.M.3
Kovach, I.M.4
Johnson, J.5
Rosenberry, T.L.6
Mildvan, A.S.7
-
24
-
-
77954339384
-
-
10.1021/jp104258d 1:CAS:528:DC%2BC3cXnsFGntbk%3D
-
Y. Zhou S. Wang Y. Zhang 2010 J. Phys. Chem. B 114 8817 10.1021/jp104258d 1:CAS:528:DC%2BC3cXnsFGntbk%3D
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 8817
-
-
Zhou, Y.1
Wang, S.2
Zhang, Y.3
-
26
-
-
84865521264
-
Kholinesterazy cheloveka. Superkomp'yuternye vychisleniya v issledovanii mekhanizma deistviya i roli molekulyarnogo polimorfizma belkovoi molekuly
-
S. D. Varfolomeev (eds). Max Press Moscow. [Human Cholinesterases. High-Performance Computing for Studies of Mechanism of Action and Role in Molecular Polymorphism of Protein Molecule]
-
S. V. Lushchekina, B. L. Grigorenko, A. V. Nemukhin, S. D. Varfolomeev, Kholinesterazy cheloveka. Superkomp'yuternye vychisleniya v issledovanii mekhanizma deistviya i roli molekulyarnogo polimorfizma belkovoi molekuly [Human Cholinesterases. High-Performance Computing for Studies of Mechanism of Action and Role in Molecular Polymorphism of Protein Molecule] in Postgenomnye issledovaniya i tekhnologii [Postgenome Studies and Technologies], Ed. S. D. Varfolomeev, Max Press, Moscow, 2011, p. 15.
-
(2011)
Postgenomnye Issledovaniya i Tekhnologii [Postgenome Studies and Technologies]
, pp. 15
-
-
Lushchekina, S.V.1
Grigorenko, B.L.2
Nemukhin, A.V.3
Varfolomeev, S.D.4
-
28
-
-
12944255678
-
-
10.1107/S0907444900010659 1:STN:280:DC%2BD3M7htlKnsQ%3D%3D
-
G. Kryger M. Harel K. Giles L. Toker B. Velan A. Lazar C. Kronman D. Barak N. Ariel A. Shafferman I. Silman J. L. Sussman 2000 Acta Crystallogr. D. Biol. Crystallogr. 56 1385 10.1107/S0907444900010659 1:STN:280: DC%2BD3M7htlKnsQ%3D%3D
-
(2000)
Acta Crystallogr. D. Biol. Crystallogr.
, vol.56
, pp. 1385
-
-
Kryger, G.1
Harel, M.2
Giles, K.3
Toker, L.4
Velan, B.5
Lazar, A.6
Kronman, C.7
Barak, D.8
Ariel, N.9
Shafferman, A.10
Silman, I.11
Sussman, J.L.12
-
29
-
-
0037015151
-
X-ray structures of Torpedo californica acetylcholinesterase complexed with (+)-huperzine A and (-)-huperzine B: Structural evidence for an active site rearrangement
-
DOI 10.1021/bi020151+
-
H. Dvir H. L. Jiang D. M. Wong M. Harel M. Chetrit X. C. He G. Y. Jin G. L. Yu X. C. Tang I. Silman D. L. Bai J. L. Sussman 2002 Biochemistry 41 10810 10.1021/bi020151+ 1:CAS:528:DC%2BD38XlvVGktbg%3D (Pubitemid 34971058)
-
(2002)
Biochemistry
, vol.41
, Issue.35
, pp. 10810-10818
-
-
Dvir, H.1
Jiang, H.L.2
Wong, D.M.3
Harel, M.4
Chetrit, M.5
He, X.C.6
Jin, G.Y.7
Yu, G.L.8
Tang, X.C.9
Silman, I.10
Bai, D.L.11
Sussman, J.L.12
-
31
-
-
57149147607
-
-
E. J. Bylaska, W. A. De Jong, N. Govind, K. Kowalski, T. P. Straatsma, M. Valiev, D. Wang, E. Apra, T. L. Windus, J. Hammond, P. Nichols, S. Hirata, M. T. Hackler, Y. Zhao, P.-D. Fan, R. J. Harrison, M. Dupuis, D. M. A. Smith, J. Nieplocha, V. Tipparaju, M. Krishnan, A. Vazquez-Mayagoitia, Q. Wu, T. V. Voorhis, A. A. Auer, M. Nooijen, L. D. Crosby, E. Brown, G. Cisneros, G. I. Fann, H. Fruchtl, J. Garza, K. Hirao, R. Kendall, J. A. Nichols, K. Tsemekhman, K. Wolinski, J. Anchell, D. Bernholdt, P. Borowski, T. Clark, D. Clerc, H. Dachsel, M. Deegan, K. Dyall, D. Elwood, E. Glendening, M. Gutowski, A. Hess, J. Jaffe, B. Johnson, J. Ju, R. Kobayashi, R. Kutteh, Z. Lin, R. Littlefield, X. Long, B. Meng, T. Nakajima, S. Niu, L. Pollack, M. Rosing, G. Sandrone, M. Stave, H. Taylor, G. Thomas, J. Van Lenthe, A. Wong, Z. Zhang (2009) NWChem, A Computational Chemistry Package for Parallel Computers.
-
(2009)
NWChem, A Computational Chemistry Package for Parallel Computers
-
-
Bylaska, E.J.1
De Jong, W.A.2
Govind, N.3
Kowalski, K.4
Straatsma, T.P.5
Valiev, M.6
Wang, D.7
Apra, E.8
Windus, T.L.9
Hammond, J.10
Nichols, P.11
Hirata, S.12
Hackler, M.T.13
Zhao, Y.14
Fan, P.-D.15
Harrison, R.J.16
Dupuis, M.17
Smith, D.M.A.18
Nieplocha, J.19
Tipparaju, V.20
Krishnan, M.21
Vazquez-Mayagoitia, A.22
Wu, Q.23
Voorhis, T.V.24
Auer, A.A.25
Nooijen, M.26
Crosby, L.D.27
Brown, E.28
Cisneros, G.29
Fann, G.I.30
Fruchtl, H.31
Garza, J.32
Hirao, K.33
Kendall, R.34
Nichols, J.A.35
Tsemekhman, K.36
Wolinski, K.37
Anchell, J.38
Bernholdt, D.39
Borowski, P.40
Clark, T.41
Clerc, D.42
Dachsel, H.43
Deegan, M.44
Dyall, K.45
Elwood, D.46
Glendening, E.47
Gutowski, M.48
Hess, A.49
Jaffe, J.50
Johnson, B.51
Ju, J.52
Kobayashi, R.53
Kutteh, R.54
Lin, Z.55
Littlefield, R.56
Long, X.57
Meng, B.58
Nakajima, T.59
Niu, S.60
Pollack, L.61
Rosing, M.62
Sandrone, G.63
Stave, M.64
Taylor, H.65
Thomas, G.66
Van Lenthe, J.67
Wong, A.68
Zhang, Z.69
more..
-
32
-
-
27144551946
-
The reactant state for substrate-activated turnover of acetylthiocholine by butyrylcholinesterase is a tetrahedral intermediate
-
DOI 10.1021/ja052401q
-
J. R. Tormos K. L. Wiley J. Seravalli F. Nachon P. Masson Y. Nicolet D. M. Quinn 2005 J. Am. Chem. Soc. 127 14538 10.1021/ja052401q 1:CAS:528: DC%2BD2MXhtVGis7%2FN (Pubitemid 41510971)
-
(2005)
Journal of the American Chemical Society
, vol.127
, Issue.42
, pp. 14538-14539
-
-
Tormos, J.R.1
Wiley, K.L.2
Seravalli, J.3
Nachon, F.4
Masson, P.5
Nicolet, Y.6
Quinn, D.M.7
-
33
-
-
4243336395
-
-
[Russ. Chem. Bull., Int. Ed., 2001, 50, 1709]
-
S. D. Varfolomeev, K. G. Gurevich, Izv. Akad. Nauk. Ser. Khim., 2001, 1629 [Russ. Chem. Bull., Int. Ed., 2001, 50, 1709].
-
(2001)
Izv. Akad. Nauk. Ser. Khim.
, pp. 1629
-
-
Varfolomeev, S.D.1
Gurevich, K.G.2
-
34
-
-
27844526127
-
Catalytic centres of enzymes: Structural paradoxes, the phenomenon of structural unity and new reactions
-
DOI 10.1070/MC2004v014n05ABEH002020
-
S. D. Varfolomeev 2004 Mendeleev Commun. 14 185 10.1070/ MC2004v014n05ABEH002020 (Pubitemid 41646982)
-
(2004)
Mendeleev Communications
, vol.14
, Issue.5
, pp. 185-188
-
-
Varfolomeev, S.D.1
-
36
-
-
33749850939
-
Hierarchical classification of hydrolases catalytic sites
-
DOI 10.1093/bioinformatics/btl413
-
I. A. Gariev S. D. Varfolomeev 2006 Bioinformatics 22 2574 10.1093/bioinformatics/btl413 1:CAS:528:DC%2BD28XhtVyns7%2FP (Pubitemid 44560771)
-
(2006)
Bioinformatics
, vol.22
, Issue.20
, pp. 2574-2576
-
-
Gariev, I.A.1
Varfolomeev, S.D.2
|