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Volumn 122, Issue 13, 2000, Pages 2981-2987

Transition state structure and rate determination for the acylation stage of acetylcholinesterase catalyzed hydrolysis of (acetylthio)choline

Author keywords

[No Author keywords available]

Indexed keywords

ACETYLCHOLINESTERASE; ACETYLTHIOCHOLINE; ISOTOPE; SOLVENT;

EID: 0034607435     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja9933590     Document Type: Article
Times cited : (35)

References (46)
  • 1
    • 12944289413 scopus 로고    scopus 로고
    • note
    • Abbreviations: ACh, acetylcholine; AChE, acetylcholinesterase; Ala, alanine; ATCh, (acetylthio)choline; DTNB, 5,5′-dithiobis(2-nitrobenzoic acid); Glu, glutamate; Gln, glutamine; His, histidine; HuAChE, human AChE.; MAChE, mouse AChE; Ser, serine; TcAChE, Torpedo californica AChE; TX100, Triton X-100.
  • 5
  • 12
    • 0002643040 scopus 로고
    • Shafferman, A., Velan, B., Eds.; Plenum Press: New York and London
    • The sequence positions of amino acid residues are denoted by two numbers. The first number in normal type is the sequence position in mammalian AChE, and the number in italics and parentheses is the sequence position in Torpedo californica AChE. This dual numbering scheme follows the convention proposed in the following reference: Massoulié, J.; Sussman, J. L.; Doctor, B. P.; Soreq, H.; Velan, B.; Cygler, M.; Rotundo, R.; Shafferman, A.; Silman, I.; Taylor, P. In Multidiscliplinary Approaches to Cholinesterase Functions; Shafferman, A., Velan, B., Eds.; Plenum Press: New York and London, 1992; pp 285-288.
    • (1992) Multidiscliplinary Approaches to Cholinesterase Functions , pp. 285-288
    • Massoulié, J.1    Sussman, J.L.2    Doctor, B.P.3    Soreq, H.4    Velan, B.5    Cygler, M.6    Rotundo, R.7    Shafferman, A.8    Silman, I.9    Taylor, P.10
  • 14
    • 0028818897 scopus 로고
    • (b) The crystal structure of the complex of mouse AChE and the snake venom toxin fasciculin is found in the following: Bourne, Y.; Taylor, P.; Marchot, P. Cell 1995, 83, 503-512.
    • (1995) Cell , vol.83 , pp. 503-512
    • Bourne, Y.1    Taylor, P.2    Marchot, P.3
  • 15
    • 0001943648 scopus 로고
    • Quinn, D. M., Balasubramanian, A. S., Doctor, B. P., Taylor, P., Eds.; Plenum Press: New York and London
    • (c) Gentry and Doctor have compared the primary sequences of various esterases of the α/β hydrolase fold supergene family, which includes AChE: Gentry, M. K.; Doctor, B. P. In Enzymes of the Cholinesterase Family: Quinn, D. M., Balasubramanian, A. S., Doctor, B. P., Taylor, P., Eds.; Plenum Press: New York and London, 1995; pp 493-505.
    • (1995) Enzymes of the Cholinesterase Family , pp. 493-505
    • Gentry, M.K.1    Doctor, B.P.2
  • 16
    • 0002379632 scopus 로고
    • Cook, P. F., Ed.; CRC Press: Boca Raton
    • (a) Quinn, D. M.; Sutton, L. D. In Enzyme Mechanism from Isotope Effects; Cook, P. F., Ed.; CRC Press: Boca Raton, 1991; pp 73-126. Additional references to solvent isotope effect reviews can be found in this article.
    • (1991) Enzyme Mechanism from Isotope Effects , pp. 73-126
    • Quinn, D.M.1    Sutton, L.D.2
  • 17
    • 0001309736 scopus 로고
    • (b) Kiick has discussed the relationship between the curvature of proton inventories and commitment factors that are in turn estimated from substrate isotope effects: Kiick, D. M. J. Am. Chem. Soc. 1991, 113, 8499-8504.
    • (1991) J. Am. Chem. Soc. , vol.113 , pp. 8499-8504
    • Kiick, D.M.1
  • 18
    • 12944290951 scopus 로고    scopus 로고
    • note
    • 2O buffers are those that contain the same concentrations of all solutes.
  • 19
    • 1842359390 scopus 로고
    • Candour, R. D., Schowen, R. L., Eds.; Plenum Press: New York
    • (a) Hogg, J. L. In Transition States of Biochemical Processes; Candour, R. D., Schowen, R. L., Eds.; Plenum Press: New York, 1978; pp 201-224.
    • (1978) Transition States of Biochemical Processes , pp. 201-224
    • Hogg, J.L.1
  • 23
    • 0001260977 scopus 로고
    • The following references provide precedents for linear proton inventories for the chemical steps of AChE catalysis; (a) Pryor, A. N.; Selwood, T.; Leu, L.-S.; Andracki, M. A.; Lee, B. H.; Rao, M.; Rosenberry, T.; Doctor, B. P.; Silman, I.; Quinn, D. M. J. Am. Chem. Soc. 1992, 114, 3896-3900. (b) Kovach, I. M.; Larson, M.; Schowen, R. L. J. Am. Chem. Soc. 1986, 108, 3054-3056. (c) Acheson, S. A.; Dedopoulou, D.; Quinn, D. M. J. Am. Chem. Soc. 1987, 109, 239-245.
    • (1992) J. Am. Chem. Soc. , vol.114 , pp. 3896-3900
    • Pryor, A.N.1    Selwood, T.2    Leu, L.-S.3    Andracki, M.A.4    Lee, B.H.5    Rao, M.6    Rosenberry, T.7    Doctor, B.P.8    Silman, I.9    Quinn, D.M.10
  • 24
    • 0001248978 scopus 로고
    • The following references provide precedents for linear proton inventories for the chemical steps of AChE catalysis; (a) Pryor, A. N.; Selwood, T.; Leu, L.-S.; Andracki, M. A.; Lee, B. H.; Rao, M.; Rosenberry, T.; Doctor, B. P.; Silman, I.; Quinn, D. M. J. Am. Chem. Soc. 1992, 114, 3896-3900. (b) Kovach, I. M.; Larson, M.; Schowen, R. L. J. Am. Chem. Soc. 1986, 108, 3054-3056. (c) Acheson, S. A.; Dedopoulou, D.; Quinn, D. M. J. Am. Chem. Soc. 1987, 109, 239-245.
    • (1986) J. Am. Chem. Soc. , vol.108 , pp. 3054-3056
    • Kovach, I.M.1    Larson, M.2    Schowen, R.L.3
  • 25
    • 0009805678 scopus 로고
    • The following references provide precedents for linear proton inventories for the chemical steps of AChE catalysis; (a) Pryor, A. N.; Selwood, T.; Leu, L.-S.; Andracki, M. A.; Lee, B. H.; Rao, M.; Rosenberry, T.; Doctor, B. P.; Silman, I.; Quinn, D. M. J. Am. Chem. Soc. 1992, 114, 3896-3900. (b) Kovach, I. M.; Larson, M.; Schowen, R. L. J. Am. Chem. Soc. 1986, 108, 3054-3056. (c) Acheson, S. A.; Dedopoulou, D.; Quinn, D. M. J. Am. Chem. Soc. 1987, 109, 239-245.
    • (1987) J. Am. Chem. Soc. , vol.109 , pp. 239-245
    • Acheson, S.A.1    Dedopoulou, D.2    Quinn, D.M.3
  • 27
    • 0002590285 scopus 로고
    • Cleland, W. W., O'Leary, M. H., Northrop, D. B., Eds.; University Park: Baltimore
    • (b) Northrop, D. B. In Isotope Effects on Enzyme-Catalyzed Reactions; Cleland, W. W., O'Leary, M. H., Northrop, D. B., Eds.; University Park: Baltimore, 1977; pp 122-152.
    • (1977) Isotope Effects on Enzyme-Catalyzed Reactions , pp. 122-152
    • Northrop, D.B.1
  • 28
    • 12944258501 scopus 로고    scopus 로고
    • note
    • 3 = 1/(1 + C); cf. refs 2d and 10a.
  • 30
    • 0003558028 scopus 로고
    • John Wiley: New York and London
    • The modest normal β-deuterium isotope effect calculated according to eq 8 arises from the mass dependence of the frequency of collisions of the respective isotopic (acetylthio)cholines with the enzyme: Leffler, J. E.; Grunwald, E. Rates and Equilibria in Organic Reactions, John Wiley: New York and London, 1963; pp 57-59.
    • (1963) Rates and Equilibria in Organic Reactions , pp. 57-59
    • Leffler, J.E.1    Grunwald, E.2
  • 34
    • 12944268671 scopus 로고    scopus 로고
    • note
    • -1 and f = 0.68.
  • 36
    • 0027982960 scopus 로고
    • Loh, S. N.; Markley, J. L. Biochemistry 1994, 33, 1029-1036. A notable feature of the fractionation factors reported by Loh and Markley is that their average value is ∼0.8, which will generate a diminutive solvent isotope effect of ∼1.2. Moreover, unless there is a palpable shift from this value in the transition state of an enzymic reaction (a supposition for which there is no evidence), the wide variation of fractionation factors reported by Loh and Markley is of no relevance to the interpretation of solvent deuterium kinetic isotope effects.
    • (1994) Biochemistry , vol.33 , pp. 1029-1036
    • Loh, S.N.1    Markley, J.L.2
  • 46
    • 12944300113 scopus 로고    scopus 로고
    • note
    • 2 distance at 1.48 Å, calculated according to eq 10 with f = 0.76 and D(1) = 1.413 Å; this procedure is the same as that used to generate the transition state model described in Table 2 and Figure 3. As before, this new transition state model bears appreciable structural similarity to its cognate tetrahedral intermediate, particularly with respect to bond angles in which the carbonyl carbon is the central atom.


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