Image quality issues

EEG - fMRI: Physiological Basis, Technique, and Applications

Volumn , Issue , 2010, Pages 173-199

  Carmichael, David ^a  

^a UNIVERSITY COLLEGE LONDON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84865444825     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-3-540-87919-0_10     Document Type: Chapter

References (116)

1. Ahn CB, Kim JH, Cho ZH (1986) High speed spiral scan echo planar imaging. IEEE Trans Med Imaging 5(1):2-5
2. Ashburner J, Friston K (2004) Rigid body registration. In: Frackowiak RSJ, Friston KJ, Frith CD, Dolan RJ, Price CJ, Zeki S, Ashburner J, Penny W (eds) Human brain function. Elsevier, Amsterdam, pp 635-653
3. Bandettini PA, Wong EC, Jesmanowicz A, Hinks RS, Hyde JS (1994) Spin-echo and gradientecho EPI of human brain activation using BOLD contrast: a comparative study at 1.5 T. NMR Biomed 7:12-20
4. Baumann SB, Noll DC (1999) A modified electrode cap for EEG recordings in MRI scanners. Clin Neurophysiol 110:2189-2193
5. Benar C, Aghakhani Y, Wang Y, Izenberg A, Al Asmi A, Dubeau F, Gotman J (2003) Quality of EEG in simultaneous EEG-fMRI for epilepsy. Clin Neurophysiol 114:569-580
6. Biswal B, Yetkin FZ, Haughton VM, Hyde JS (1995) Functional connectivity in the motor cortex of resting human brain using echo-planar MRI. Magn Reson Med 34:537-541
7. Block KT, Frahm J (2005) Spiral imaging: a critical appraisal. J Magn Reson Imaging 21:657-668
8. Bonmassar G, Hadjikhani N, Ives JR, Hinton D, Belliveau JW (2001) Influence of EEG electrodes on the BOLD fMRI signal. Hum Brain Mapp 14:108-115
9. Bornert P, Jensen D (1994) Single-shot-double-echo EPI. Magn Reson Imaging 12:1033-1038
10. Butts K, Riederer SJ, Ehman RL, Thompson RM, Jack CR (1994) Interleaved echo planar imaging on a standard MRI system. Magn Reson Med 31:67-72
11. Carlson JW, Minemura T (1993) Imaging time reduction through multiple receiver coil data acquisition and image reconstruction. Magn Reson Med 29:681-687
12. Carmichael DW, Priest AN, De Vita E, Ordidge RJ (2005) Common SENSE (sensitivity encoding using hardware common to all MR scanners): a new method for single-shot segmented echo planar imaging. Magn Reson Med 54:402-410
13. Chen NK, Wyrwicz AM (1999) Correction for EPI distortions using multi-echo gradient-echo imaging. Magn Reson Med 41:1206-1213
14. Cho ZH, Kim DJ, Kim YK (1988) Total inhomogeneity correction including chemical shifts and susceptibility by view angle tilting. Med Phys 15:7-11
15. Cohen MS, Weisskoff RM, Rzedzian RR, Kantor HL (1990) Sensory stimulation by time-varying magnetic fields. Magn Reson Med 14:409-414
16. Constable RT, Spencer DD (1999) Composite image formation in z-shimmed functional MR imaging. Magn Reson Med 42:110-117
17. Constantinides CD, Atalar E, McVeigh ER (1997) Signal-to-noise measurements in magnitude images from NMR phased arrays. Magn Reson Med 38:852-857
18. Cusack R, Russell B, Cox SM, De Panfilis C, Schwarzbauer C, Ansorge R (2005) An evaluation of the use of passive shimming to improve frontal sensitivity in fMRI. Neuroimage 24:82-91
19. De Graaf RA, Nicolay K, Garwood M (1996) Single-shot, B1-insensitive slice selection with a gradient-modulated adiabatic pulse, BISS-8. Magn Reson Med 35:652-657
20. Debener S, Mullinger KJ, Niazy RK, Bowtell RW (2008) Properties of the ballistocardiogram artefact as revealed by EEG recordings at 1. 5, 3 and 7 T static magnetic field strength. Int J Psychophysiol 67:189-199
21. Deichmann R, Gottfried JA, Hutton C, Turner R (2003) Optimized EPI for fMRI studies of the orbitofrontal cortex. Neuroimage 19:430-441
22. Deichmann R, Josephs O, Hutton C, Corfield DR, Turner R (2002) Compensation of susceptibility-induced BOLD sensitivity losses in echo-planar fMRI imaging. Neuroimage 15:120-135
23. Dietrich O, Raya JG, Reeder SB, Reiser MF, Schoenberg SO (2007) Measurement of signalto-noise ratios in MR images: influence of multichannel coils, parallel imaging, and reconstruction filters. J Magn Reson Imaging 26:375-385
24. Duong TQ, Yacoub E, Adriany G, Hu X, Ugurbil K, Vaughan JT, Merkle H, Kim SG (2002) Highresolution, spin-echo BOLD, and CBF fMRI at 4 and 7 T. Magn Reson Med 48:589-593
25. Duyn JH, Yang Y, Frank JA, Van Der Veen JW (1998) Simple correction method for k-space trajectory deviations in MRI. J Magn Reson 132:150-153
26. Feinberg DA, Hale JD, Watts JC, Kaufman L, Mark A (1986) Halving MR imaging time by conjugation: demonstration at 3.5 kG. Radiology 161:527-531
27. Feinberg DA, Kiefer B, Johnson G (1995) GRASE improves spatial resolution in single shot imaging. Magn Reson Med 33:529-533
28. Feinberg DA, Oshio K (1994) Phase errors in multi-shot echo planar imaging. Magn Reson Med 32:535-539
29. Feinberg DA, Reese TG, Wedeen VJ (2002) Simultaneous echo refocusing in EPI. Magn Reson Med 48:1-5
30. Fernandez-Seara MA, Wang Z, Wang J, Rao HY, Guenther M, Feinberg DA, Detre JA (2005) Continuous arterial spin labeling perfusion measurements using single shot 3D GRASE at 3 T. Magn Reson Med 54:1241-1247
31. Fischer H, Ladebeck R (1998) Echo-planar imaging image artefacts. In: Schmitt F, Stehling MK, Turner R (eds) Echo-planar imaging. Springer, Berlin, pp 180-200
32. Fox MD, Raichle ME (2007) Spontaneous fluctuations in brain activity observed with functional magnetic resonance imaging. Nat Rev Neurosci 8:700-711
33. Frahm J, Merboldt KD, Hanicke W (1993) Functional MRI of human brain activation at high spatial resolution. Magn Reson Med 29:139-144
34. Frahm J, Merboldt KD, Hanicke W (1988) Direct FLASH MR imaging of magnetic field inhomogeneities by gradient compensation. Magn Reson Med 6:474-480
35. Friedman L, Glover GH (2006) Report on a multicenter fMRI quality assurance protocol. J Magn Reson Imaging 23:827-839
36. Friedman L, Stern H, Brown GG, Mathalon DH, Turner J, Glover GH, Gollub RL, Lauriello J, Lim KO, Cannon T, Greve DN, Bockholt HJ, Belger A, Mueller B, Doty MJ, He J, Wells W, Smyth P, Pieper S, Kim S, Kubicki M, Vangel M, Potkin SG (2007) Test-retest and between-site reliability in a multicenter fMRI study. Hum Brain Mapp 29:958-972
37. Friston KJ, Williams S, Howard R, Frackowiak RS, Turner R (1996) Movement-related effects in fMRI time-series. Magn Reson Med 35:346-355
38. Garwood M, Delabarre L (2001) The return of the frequency sweep: designing adiabatic pulses for contemporary NMR. J Magn Reson 153:155-177
39. Garwood M, Ugurbil K, Rath AR, Bendall MR, Ross BD, Mitchell SL, Merkle H (1989) Magnetic resonance imaging with adiabatic pulses using a single surface coil for RF transmission and signal detection. Magn Reson Med 9:25-34
40. Glover GH, Law CS (2001) Spiral-in/out BOLD fMRI for increased SNR and reduced susceptibility artifacts. Magn Reson Med 46:515-522
41. Glover GH, Li TQ, Ress D (2000) Image-based method for retrospective correction of physiological motion effects in fMRI: RETROICOR. Magn Reson Med 44:162-167
42. Griswold MA, Jakob PM, Heidemann RM, Nittka M, Jellus V, Wang J, Kiefer B, Haase A (2002) Generalized autocalibrating partially parallel acquisitions (GRAPPA) 121. Magn Reson Med 47:1202-1210
43. Gruetter R (1993) Automatic, localized in vivo adjustment of all first- and second-order shim coils. Magn Reson Med 29:804-811
44. Gruetter R, Tkac I (2000) Field mapping without reference scan using asymmetric echo-planar techniques. Magn Reson Med 43:319-323
45. Haacke EM, Brown RW, Thompson MR, Venkatesan R (1999) The continuous and discrete Fourier transforms. In: Magnetic resonance imaging: physical principles and sequence design. Wiley, New York, pp 207-230
46. Hamandi K, Salek-Haddadi A, Fish DR, Lemieux L (2004) EEG/functional MRI in epilepsy: the Queen Square Experience. J Clin Neurophysiol 21:241-248
47. Hennel F, Nedelec JF (1995) Interleaved asymmetric echo-planar imaging. Magn Reson Med 34:520-524
48. Hoult DI, Lauterbur PC (1976) The signal to noise ratio of the nuclear magnetic resonance experiment. J Magn Reson 34:425-433
49. Hu X, Le TH (1996) Artifact reduction in EPI with phase-encoded reference scan. Magn Reson Med 36:166-171
50. Hutchinson M, Raff U (1988) Fast MRI data acquisition using multiple detectors. Magn Reson Med 6:87-91
51. Hutton C, Bork A, Josephs O, Deichmann R, Ashburner J, Turner R (2002) Image distortion correction in fMRI: a quantitative evaluation. Neuroimage 16:217-240
52. Jacobs J, Kobayashi E, Boor R, Muhle H, Stephan W, Hawco C, Dubeau F, Jansen O, Stephani U, Gotman J, Siniatchkin M (2007) Hemodynamic responses to interictal epileptiform discharges in children with symptomatic epilepsy. Epilepsia 48:2068-2078
53. Jezzard P, Balaban RS (1995) Correction for geometric distortion in echo planar images from B0 field variations 50. Magn Reson Med 34:65-73
54. Jezzard P, Clare S (1999) Sources of distortion in functional MRI data. Hum Brain Mapp 8:80-85
55. Josephs O, Weiskopf N, Deichmann R, Turner R (2000) Trajectory measurement and generalised reconstruction in rectilinear EPI. In: Proc 8th Int Meet ISMRM, Denver, CO, USA, 1-7 April 2000
56. Kleinschmidt A, Bruhn H, Kruger G, Merboldt KD, Stoppe G, Frahm J (1999) Effects of sedation, stimulation, and placebo on cerebral blood oxygenation: a magnetic resonance neuroimaging study of psychotropic drug action. NMR Biomed 12:286-292
57. Krakow K, Allen PJ, Symms MR, Lemieux L, Josephs O, Fish DR (2000) EEG recording during fMRI experiments: image quality. Hum Brain Mapp 10:10-15
58. Lamberton F, Delcroix N, Grenier D, Mazoyer B, Joliot M (2007) A new EPI-based dynamic field mapping method: application to retrospective geometrical distortion corrections. J Magn Reson Imaging 26:747-755
59. Laufs H, Daunizeau J, Carmichael DW, Kleinschmidt A (2008) Recent advances in recording electrophysiological data simultaneously with magnetic resonance imaging. Neuroimage 40:515-528
60. Laufs H, Krakow K, Sterzer P, Eger E, Beyerle A, Salek-Haddadi A, Kleinschmidt A (2003) Electroencephalographic signatures of attentional and cognitive default modes in spontaneous brain activity fluctuations at rest. Proc Natl Acad Sci USA 100:11053-11058
61. Lemieux L, Allen PJ, Franconi F, Symms MR, Fish DR (1997) Recording of EEG during fMRI experiments: patient safety. Magn Reson Med 38:943-952
62. Lemieux L, Salek-Haddadi A, Lund TE, Laufs H, Carmichael D (2007) Modelling large motion events in fMRI studies of patients with epilepsy. Magn Reson Imaging 25:894-901
63. Liston AD, Lund TE, Salek-Haddadi A, Hamandi K, Friston KJ, Lemieux L (2006) Modelling cardiac signal as a confound in EEG-fMRI and its application in focal epilepsy studies. Neuroimage 30:827-834
64. Lund TE, Norgaard MD, Rostrup E, Rowe JB, Paulson OB (2005) Motion or activity: their role in intra- and inter-subject variation in fMRI. Neuroimage 26:960-964
65. Lutcke H, Merboldt KD, Frahm J (2006) The cost of parallel imaging in functional MRI of the human brain. Magn Reson Imaging 24:1-5
66. Mackenzie IS, Robinson EM, Wells AN, Wood B (1987) A simple field map for shimming. Magn Reson Med 5:262-268
67. Mansfield P (1977) Multi-planar image formation using NMR spin echoes. J Phys C 10:L55-L58
68. Mansfield P (1984) Spatial mapping of the chemical shift in NMR. Magn Reson Med 1:370-386
69. Mansfield P, Harvey PR (1993) Limits to neural stimulation in echo-planar imaging. Magn Reson Med 29:746-758
70. Menon RS, Thomas CG, Gati JS (1997) Investigation of BOLD contrast in fMRI using multi-shot EPI. NMR Biomed 10:179-182
71. Merboldt KD, Finsterbusch J, Frahm J (2000) Reducing inhomogeneity artifacts in functional MRI of human brain activation-thin sections vs gradient compensation. J Magn Reson 145:184-191
72. Miller KL, Hargreaves BA, Lee J, Ress D, De Charms RC, Pauly JM (2003) Functional brain imaging using a blood oxygenation sensitive steady state. Magn Reson Med 50:675-683
73. Miller KL, Hargreaves BA, Lee J, Ress D, De Charms RC, Pauly JM (2004) Functional brain imaging with BOSS FMRI. Conf Proc IEEE Eng Med Biol Soc 7:5234-5237
74. Miller KL, Smith SM, Jezzard P, Pauly JM (2006) High-resolution FMRI at 1.5T using balanced SSFP. Magn Reson Med 55:161-170
75. Morgan PS, Bowtell RW, McIntyre DJ, Worthington BS (2004) Correction of spatial distortion in EPI due to inhomogeneous static magnetic fields using the reversed gradient method. J Magn Reson Imaging 19:499-507
76. Mullinger K, Debener S, Coxon R, Bowtell R (2007) Effects of simultaneous EEG recording on MRI data quality at 1. 5, 3 and 7 tesla. Int J Psychophysiol 67:178-188
77. Munger P, Crelier GR, Peters TM, Pike GB (2000) An inverse problem approach to the correction of distortion in EPI images. IEEE Trans Med Imaging 19:681-689
78. Nair G, Duong TQ (2004) Echo-planar BOLD fMRI of mice on a narrow-bore 9.4 T magnet. Magn Reson Med 52:430-434
79. Norris DG, Zysset S, Mildner T, Wiggins CJ (2002) An investigation of the value of spin-echo-based fMRI using a Stroop color-word matching task and EPI at 3 T. Neuroimage 15:719-726
80. Ordidge R (1999) The development of echo-planar imaging (EPI):1977-1982. MAGMA 9;117-121
81. *-weighted MRI at 3 Tesla. Magn Reson Med 32:335-341
82. Ordidge RJ, Helpern JA, Qing ZX, Knight RA, Nagesh V (1994b) Correction of motional artifacts in diffusion-weighted MR images using navigator echoes. Magn Reson Imaging 12:455-460
83. Parkes LM, Schwarzbach JV, Bouts AA, Deckers RH, Pullens P, Kerskens CM, Norris DG (2005) Quantifying the spatial resolution of the gradient echo and spin echo BOLD response at 3 Tesla. Magn Reson Med 54:1465-1472
84. Poser BA, Versluis MJ, Hoogduin JM, Norris DG (2006) BOLD contrast sensitivity enhancement and artifact reduction with multiecho EPI: parallel-acquired inhomogeneity-desensitized fMRI. Magn Reson Med 55:1227-1235
85. Preston AR, Thomason ME, Ochsner KN, Cooper JC, Glover GH (2004) Comparison of spiral-in/out and spiral-out BOLD fMRI at 1.5 and 3 T. Neuroimage 21:291-301
86. Priest AN, Carmichael DW, De Vita E, Ordidge RJ (2004) Method for spatially interleaving two images to halve EPI readout times: two reduced acquisitions interleaved (TRAIL) Magn Reson Med 51:1212-1222
87. Priest AN, De Vita E, Thomas DL, Ordidge RJ (2006) EPI distortion correction from a simultaneously acquired distortion map using TRAIL. J Magn Reson Imaging 23:597-603
88. Pruessmann KP, Weiger M, Scheidegger MB, Boesiger P (1999) SENSE: sensitivity encoding for fast MRI 18. Magn Reson Med 42;952-962
89. Reber PJ, Wong EC, Buxton RB, Frank LR (1998) Correction of off resonance-related distortion in echo-planar imaging using EPI-based field maps. Magn Reson Med 39:328-330
90. Reeder SB, Atalar E, Bolster BD Jr, McVeigh ER (1997) Quantification and reduction of ghosting artifacts in interleaved echo-planar imaging. Magn Reson Med 38:429-439
91. Rzedzian R (1987) High speed, high resolution, spin echo imaging by mosaic scan and MESH. In: Proc 6th Annu Meet SMRM, New York, 17-21 Aug. 1987
92. Salek-Haddadi A, Diehl B, Hamandi K, Merschhemke M, Liston A, Friston K, Duncan JS, Fish DR, Lemieux L (2006) Hemodynamic correlates of epileptiform discharges: an EEG-fMRI study of 63 patients with focal epilepsy. Brain Res 1088:148-166
93. Salek-Haddadi A, Lemieux L, Merschhemke M, Diehl B, Allen PJ, Fish DR (2003) EEG quality during simultaneous functional MRI of interictal epileptiform discharges. Magn Reson Imaging 21:1159-1166
94. Sangill R, Wallentin M, Ostergaard L, Vestergaard-Poulsen P (2006) The impact of susceptibility gradients on cartesian and spiral EPI for BOLD fMRI. MAGMA 19:105-114
95. Scarff CJ, Reynolds A, Goodyear BG, Ponton CW, Dort JC, Eggermont JJ (2004) Simultaneous 3-T fMRI and high-density recording of human auditory evoked potentials. Neuroimage 23:1129-1142
96. Schmidt CF, Boesiger P, Ishai A (2005) Comparison of fMRI activation as measured with gradient- and spin-echo EPI during visual perception. Neuroimage 26:852-859
97. Schmithorst VJ, Dardzinski BJ, Holland SK (2001) Simultaneous correction of ghost and geometric distortion artifacts in EPI using a multiecho reference scan. IEEE Trans Med Imaging 20:535-539
98. Schmitt F, Stehling MK, Turner R (eds) (1998) Echo-planar imaging. Springer, Berlin
99. Shen J, Rothman DL (1997) Adiabatic slice-selective excitation for surface coils. J Magn Reson 124:72-79
100. Sled JG, Pike GB (1998) Standing-wave and RF penetration artifacts caused by elliptic geometry: an electrodynamic analysis of MRI. IEEE Trans Med Imaging 17:653-662
101. Sodickson DK, Manning WJ (1997) Simultaneous acquisition of spatial harmonics (SMASH): fast imaging with radiofrequency coil arrays. Magn Reson Med 38:591-603
102. Stevens TK, Ives JR, Klassen LM, Bartha R (2007) MR compatibility of EEG scalp electrodes at 4 Tesla. J Magn Reson Imaging 25:872-877
103. Turner R, Ordidge RJ (2000) Technical challenges of functional magnetic resonance imaging. IEEE Eng Med Biol Mag 19:42-54
104. Van Gelderen P, De Zwart JA, Starewicz P, Hinks RS, Duyn JH (2007) Real-time shimming to compensate for respiration-induced B0 fluctuations. Magn Reson Med 57:362-368
105. Vasios CE, Angelone LM, Purdon PL, Ahveninen J, Belliveau JW, Bonmassar G (2006) EEG/(f) MRI measurements at 7 Tesla using a new EEG cap ("InkCap"). Neuroimage 33:1082-1092
106. Wan X, Gullberg GT, Parker DL, Zeng GL (1997) Reduction of geometric and intensity distortions in echo-planar imaging using a multireference scan. Magn Reson Med 37:932-942
107. Ward HA, Riederer SJ, Jack CR Jr. (2002) Real-time autoshimming for echo planar timecourse imaging. Magn Reson Med 48:771-780
108. Weiskopf N, Hutton C, Josephs O, Deichmann R (2006) Optimal EPI parameters for reduction of susceptibility-induced BOLD sensitivity losses: a whole-brain analysis at 3 T and 1.5 T. Neuroimage 33:493-504
109. Weiskopf N, Hutton C, Josephs O, Turner R, Deichmann R (2007) Optimized EPI for fMRI studies of the orbitofrontal cortex: compensation of susceptibility-induced gradients in the readout direction. MAGMA 20:39-49
110. Weiskopf N, Klose U, Birbaumer N, Mathiak K (2005) Single-shot compensation of image distortions and BOLD contrast optimization using multi-echo EPI for real-time fMRI. Neuroimage 24:1068-1079
111. Weisskoff RM (1996) Simple measurement of scanner stability for functional NMR imaging of activation in the brain. Magn Reson Med 36:643-645
112. Wielopolski PA, Schmitt F, Stehling MK (1998) Echo-planar pulse sequences. In: Schmitt F, Stehling MK, Turner R (eds) Echo-planar imaging. Springer, Berlin, pp 65-134
113. Wilson JL, Jenkinson M, Jezzard P (2003) Protocol to determine the optimal intraoral passive shim for minimisation of susceptibility artifact in human inferior frontal cortex 3. Neuroimage 19:1802-1811
114. Wilson JL, Jezzard P (2003) Utilization of an intra-oral diamagnetic passive shim in functional MRI of the inferior frontal cortex. Magn Reson Med 50:1089-1094
115. Zaitsev M, Hennig J, Speck O (2004) Point spread function mapping with parallel imaging techniques and high acceleration factors: fast, robust, and flexible method for echo-planar imaging distortion correction. Magn Reson Med 52:1156-1166
116. Zhong K, Leupold J, Hennig J, Speck O (2007) Systematic investigation of balanced steady-state free precession for functional MRI in the human visual cortex at 3 Tesla. Magn Reson Med 57:67-73