-
1
-
-
0032549142
-
Structural basis of plasticity in T cell receptor recognition of a self peptide-MHC antigen
-
Garcia KC, Degano M, Pease L, Huang M, Peterson PA, et al. (1998) Structural basis of plasticity in T cell receptor recognition of a self peptide-MHC antigen. Science 279: 1166-1172.
-
(1998)
Science
, vol.279
, pp. 1166-1172
-
-
Garcia, K.C.1
Degano, M.2
Pease, L.3
Huang, M.4
Peterson, P.A.5
-
2
-
-
0037377309
-
Comparison of overlapping peptide sets for detection of antiviral CD8 and CD4 T cell responses
-
Draenert R, Altfeld M, Brander C, Basgoz N, Corcoran C, et al. (2003) Comparison of overlapping peptide sets for detection of antiviral CD8 and CD4 T cell responses. J Immunol Methods 275: 19-29.
-
(2003)
J Immunol Methods
, vol.275
, pp. 19-29
-
-
Draenert, R.1
Altfeld, M.2
Brander, C.3
Basgoz, N.4
Corcoran, C.5
-
3
-
-
70449416038
-
Prediction of MHC-peptide binding: a systematic and comprehensive overview
-
Lafuente EM, Reche PA, (2009) Prediction of MHC-peptide binding: a systematic and comprehensive overview. Curr Pharm Des 15: 3209-3220.
-
(2009)
Curr Pharm Des
, vol.15
, pp. 3209-3220
-
-
Lafuente, E.M.1
Reche, P.A.2
-
4
-
-
77956881280
-
Computational analysis and modeling of cleavage by the immunoproteasome and the constitutive proteasome
-
Diez-Rivero CM, Lafuente EM, Reche PA, (2010) Computational analysis and modeling of cleavage by the immunoproteasome and the constitutive proteasome. BMC Bioinformatics 11: 479.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 479
-
-
Diez-Rivero, C.M.1
Lafuente, E.M.2
Reche, P.A.3
-
5
-
-
77949368187
-
Quantitative modeling of peptide binding to TAP using support vector machine
-
Diez-Rivero CM, Chenlo B, Zuluaga P, Reche PA, (2010) Quantitative modeling of peptide binding to TAP using support vector machine. Proteins 78: 63-72.
-
(2010)
Proteins
, vol.78
, pp. 63-72
-
-
Diez-Rivero, C.M.1
Chenlo, B.2
Zuluaga, P.3
Reche, P.A.4
-
6
-
-
20844434026
-
Modeling the MHC class I pathway by combining predictions of proteasomal cleavage, TAP transport and MHC class I binding
-
Tenzer S, Peters B, Bulik S, Schoor O, Lemmel C, et al. (2005) Modeling the MHC class I pathway by combining predictions of proteasomal cleavage, TAP transport and MHC class I binding. Cell Mol Life Sci 62: 1025-1037.
-
(2005)
Cell Mol Life Sci
, vol.62
, pp. 1025-1037
-
-
Tenzer, S.1
Peters, B.2
Bulik, S.3
Schoor, O.4
Lemmel, C.5
-
7
-
-
0242581356
-
Genome-wide characterization of a viral cytotoxic T lymphocyte epitope repertoire
-
Zhong W, Reche PA, Lai CC, Reinhold B, Reinherz EL, (2003) Genome-wide characterization of a viral cytotoxic T lymphocyte epitope repertoire. J Biol Chem 278: 45135-45144.
-
(2003)
J Biol Chem
, vol.278
, pp. 45135-45144
-
-
Zhong, W.1
Reche, P.A.2
Lai, C.C.3
Reinhold, B.4
Reinherz, E.L.5
-
8
-
-
23644443226
-
Integrated modeling of the major events in the MHC class I antigen processing pathway
-
Donnes P, Kohlbacher O, (2005) Integrated modeling of the major events in the MHC class I antigen processing pathway. Protein Sci 14: 2132-2140.
-
(2005)
Protein Sci
, vol.14
, pp. 2132-2140
-
-
Donnes, P.1
Kohlbacher, O.2
-
9
-
-
78149297469
-
Computer aided selection of candidate vaccine antigens
-
Flower DR, Macdonald IK, Ramakrishnan K, Davies MN, Doytchinova IA, (2010) Computer aided selection of candidate vaccine antigens. Immunome Res 6Suppl 2: S1.
-
(2010)
Immunome Res
, vol.6
-
-
Flower, D.R.1
Macdonald, I.K.2
Ramakrishnan, K.3
Davies, M.N.4
Doytchinova, I.A.5
-
11
-
-
0027250808
-
How does HIV cause AIDS?
-
Weiss RA, (1993) How does HIV cause AIDS? Science 260: 1273-1279.
-
(1993)
Science
, vol.260
, pp. 1273-1279
-
-
Weiss, R.A.1
-
13
-
-
23144443082
-
PEPVAC: a web server for multi-epitope vaccine development based on the prediction of supertypic MHC ligands
-
Reche PA, Reinherz EL, (2005) PEPVAC: a web server for multi-epitope vaccine development based on the prediction of supertypic MHC ligands. Nucleic Acids Res 33: W138-142.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Reche, P.A.1
Reinherz, E.L.2
-
14
-
-
79959549305
-
Sources of diversity in T cell epitope discovery
-
Chang CX, Dai L, Tan ZW, Choo JA, Bertoletti A, et al. (2011) Sources of diversity in T cell epitope discovery. Front Biosci 17: 3014-3035.
-
(2011)
Front Biosci
, vol.17
, pp. 3014-3035
-
-
Chang, C.X.1
Dai, L.2
Tan, Z.W.3
Choo, J.A.4
Bertoletti, A.5
-
15
-
-
0037342270
-
Quantitating protein synthesis, degradation, and endogenous antigen processing
-
Princiotta MF, Finzi D, Qian SB, Gibbs J, Schuchmann S, et al. (2003) Quantitating protein synthesis, degradation, and endogenous antigen processing. Immunity 18: 343-354.
-
(2003)
Immunity
, vol.18
, pp. 343-354
-
-
Princiotta, M.F.1
Finzi, D.2
Qian, S.B.3
Gibbs, J.4
Schuchmann, S.5
-
16
-
-
0035399848
-
Not such a dismal science: the economics of protein synthesis, folding, degradation and antigen processing
-
Yewdell JW, (2001) Not such a dismal science: the economics of protein synthesis, folding, degradation and antigen processing. Trends Cell Biol 11: 294-297.
-
(2001)
Trends Cell Biol
, vol.11
, pp. 294-297
-
-
Yewdell, J.W.1
-
17
-
-
0035500453
-
Cutting edge: neosynthesis is required for the presentation of a T cell epitope from a long-lived viral protein
-
Khan S, de Giuli R, Schmidtke G, Bruns M, Buchmeier M, et al. (2001) Cutting edge: neosynthesis is required for the presentation of a T cell epitope from a long-lived viral protein. J Immunol 167: 4801-4804.
-
(2001)
J Immunol
, vol.167
, pp. 4801-4804
-
-
Khan, S.1
de Giuli, R.2
Schmidtke, G.3
Bruns, M.4
Buchmeier, M.5
-
18
-
-
33745301876
-
Tight linkage between translation and MHC class I peptide ligand generation implies specialized antigen processing for defective ribosomal products
-
Qian SB, Reits E, Neefjes J, Deslich JM, Bennink JR, et al. (2006) Tight linkage between translation and MHC class I peptide ligand generation implies specialized antigen processing for defective ribosomal products. J Immunol 177: 227-233.
-
(2006)
J Immunol
, vol.177
, pp. 227-233
-
-
Qian, S.B.1
Reits, E.2
Neefjes, J.3
Deslich, J.M.4
Bennink, J.R.5
-
19
-
-
0034643348
-
The major substrates for TAP in vivo are derived from newly synthesized proteins
-
Reits E, A J, Vos JC, Grommé M, Neefjes J (2000) The major substrates for TAP in vivo are derived from newly synthesized proteins. Nature: 774-778.
-
(2000)
Nature
, pp. 774-778
-
-
Reits, E.A.J.1
Vos, J.C.2
Grommé, M.3
Neefjes, J.4
-
20
-
-
0030239693
-
Defective ribosomal products (DRiPs): a major source of antigenic peptides for MHC class I molecules?
-
Yewdell JW, Anton LC, Bennink JR, (1996) Defective ribosomal products (DRiPs): a major source of antigenic peptides for MHC class I molecules? J Immunol 157: 1823-1826.
-
(1996)
J Immunol
, vol.157
, pp. 1823-1826
-
-
Yewdell, J.W.1
Anton, L.C.2
Bennink, J.R.3
-
21
-
-
0017235955
-
Determination of molar ratios of vesicular stomatitis virus induced RNA species in BHK21 cells
-
Villarreal LP, Breindl M, Holland JJ, (1976) Determination of molar ratios of vesicular stomatitis virus induced RNA species in BHK21 cells. Biochemistry 15: 1663-1667.
-
(1976)
Biochemistry
, vol.15
, pp. 1663-1667
-
-
Villarreal, L.P.1
Breindl, M.2
Holland, J.J.3
-
22
-
-
0033046472
-
Immunodominance in major histocompatibility complex class I-restricted T lymphocyte responses
-
Yewdell JW, Bennink JR, (1999) Immunodominance in major histocompatibility complex class I-restricted T lymphocyte responses. Annu Rev Immunol 17: 51-88.
-
(1999)
Annu Rev Immunol
, vol.17
, pp. 51-88
-
-
Yewdell, J.W.1
Bennink, J.R.2
-
23
-
-
0035862326
-
Substantial differences in specificity of HIV-specific cytotoxic T cells in acute and chronic HIV infection
-
Goulder PJ, Altfeld MA, Rosenberg ES, Nguyen T, Tang Y, et al. (2001) Substantial differences in specificity of HIV-specific cytotoxic T cells in acute and chronic HIV infection. J Exp Med 193: 181-194.
-
(2001)
J Exp Med
, vol.193
, pp. 181-194
-
-
Goulder, P.J.1
Altfeld, M.A.2
Rosenberg, E.S.3
Nguyen, T.4
Tang, Y.5
-
24
-
-
0032055366
-
Superdominance among immunodominant H-2Kb-restricted epitopes and reversal by dendritic cell-mediated antigen delivery
-
Sandberg JK, Grufman P, Wolpert EZ, Franksson L, Chambers BJ, et al. (1998) Superdominance among immunodominant H-2Kb-restricted epitopes and reversal by dendritic cell-mediated antigen delivery. J Immunol 160: 3163-3169.
-
(1998)
J Immunol
, vol.160
, pp. 3163-3169
-
-
Sandberg, J.K.1
Grufman, P.2
Wolpert, E.Z.3
Franksson, L.4
Chambers, B.J.5
-
25
-
-
0029905742
-
Immunodominance of cytotoxic T lymphocyte epitopes co-injected in vivo and modulation by interleukin-12
-
Eberl G, Kessler B, Eberl LP, Brunda MJ, Valmori D, et al. (1996) Immunodominance of cytotoxic T lymphocyte epitopes co-injected in vivo and modulation by interleukin-12. Eur J Immunol 26: 2709-2716.
-
(1996)
Eur J Immunol
, vol.26
, pp. 2709-2716
-
-
Eberl, G.1
Kessler, B.2
Eberl, L.P.3
Brunda, M.J.4
Valmori, D.5
-
26
-
-
29244462802
-
Identification of protective and non-protective T cell epitopes in influenza
-
Epub 2005 Aug 2018
-
Crowe SR, Miller SC, Woodland DL (2006) Identification of protective and non-protective T cell epitopes in influenza. Vaccine 24: 452-456. Epub 2005 Aug 2018.
-
(2006)
Vaccine
, vol.24
, pp. 452-456
-
-
Crowe, S.R.1
Miller, S.C.2
Woodland, D.L.3
-
27
-
-
52049105157
-
Protective CD8 T cells against Plasmodium liver stages: immunobiology of an 'unnatural' immune response
-
Overstreet MG, Cockburn IA, Chen YC, Zavala F, (2008) Protective CD8 T cells against Plasmodium liver stages: immunobiology of an 'unnatural' immune response. Immunol Rev 225: 272-283.
-
(2008)
Immunol Rev
, vol.225
, pp. 272-283
-
-
Overstreet, M.G.1
Cockburn, I.A.2
Chen, Y.C.3
Zavala, F.4
-
28
-
-
0027462422
-
Immunity to intracellular bacteria
-
Kaufmann SH, (1993) Immunity to intracellular bacteria. Annu Rev Immunol 11: 129-163.
-
(1993)
Annu Rev Immunol
, vol.11
, pp. 129-163
-
-
Kaufmann, S.H.1
-
29
-
-
18744368784
-
EPIMHC: a curated database of MHC-binding peptides for customized computational vaccinology
-
Epub 2005 Jan 2118
-
Reche PA, Zhang H, Glutting JP, Reinherz EL (2005) EPIMHC: a curated database of MHC-binding peptides for customized computational vaccinology. Bioinformatics 21: 2140-2141. Epub 2005 Jan 2118.
-
(2005)
Bioinformatics
, vol.21
, pp. 2140-2141
-
-
Reche, P.A.1
Zhang, H.2
Glutting, J.P.3
Reinherz, E.L.4
-
30
-
-
20944447214
-
The immune epitope database and analysis resource: from vision to blueprint
-
Peters B, Sidney J, Bourne P, Bui H, Buus S, et al. (2005) The immune epitope database and analysis resource: from vision to blueprint. PLoS Biol 3: e91.
-
(2005)
PLoS Biol
, vol.3
-
-
Peters, B.1
Sidney, J.2
Bourne, P.3
Bui, H.4
Buus, S.5
-
31
-
-
48449095267
-
PVS: a web server for protein sequence variability analysis tuned to facilitate conserved epitope discovery
-
Epub 2008 Apr 2027
-
Garcia-Boronat M, Diez-Rivero CM, Reinherz EL, Reche PA (2008) PVS: a web server for protein sequence variability analysis tuned to facilitate conserved epitope discovery. Nucleic Acids Res 36: W35-41. Epub 2008 Apr 2027.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 35-41
-
-
Garcia-Boronat, M.1
Diez-Rivero, C.M.2
Reinherz, E.L.3
Reche, P.A.4
-
32
-
-
33748335464
-
Elicitation from virus-naive individuals of cytotoxic T lymphocytes directed against conserved HIV-1 epitopes
-
Reche PA, Keskin DB, Hussey RE, Ancuta P, Gabuzda D, et al. (2006) Elicitation from virus-naive individuals of cytotoxic T lymphocytes directed against conserved HIV-1 epitopes. Med Immunol 5: 1.
-
(2006)
Med Immunol
, vol.5
, pp. 1
-
-
Reche, P.A.1
Keskin, D.B.2
Hussey, R.E.3
Ancuta, P.4
Gabuzda, D.5
-
33
-
-
0034623005
-
T-Coffee: A novel method for fast and accurate multiple sequence alignment
-
Notredame C, Higgins DG, Heringa J, (2000) T-Coffee: A novel method for fast and accurate multiple sequence alignment. J Mol Biol 302: 205-217.
-
(2000)
J Mol Biol
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
34
-
-
0036727207
-
Prediction of MHC class I binding peptides using profile motifs
-
Reche PA, Glutting JP, Reinherz EL, (2002) Prediction of MHC class I binding peptides using profile motifs. Hum Immunol 63: 701-709.
-
(2002)
Hum Immunol
, vol.63
, pp. 701-709
-
-
Reche, P.A.1
Glutting, J.P.2
Reinherz, E.L.3
|