-
1
-
-
39049135439
-
Quantitative trait loci affecting milk yield and protein percentage in a three-country Brown Swiss population
-
Bagnato A., Schiavini F., Rossoni A., Maltecca C., Dolezal M., Medugorac I., Sölkner J., Russo V., Fontanesi L., Friedmann A., Soller M., Lipkin E. Quantitative trait loci affecting milk yield and protein percentage in a three-country Brown Swiss population. J. Dairy Sci. 2008, 91:767-783.
-
(2008)
J. Dairy Sci.
, vol.91
, pp. 767-783
-
-
Bagnato, A.1
Schiavini, F.2
Rossoni, A.3
Maltecca, C.4
Dolezal, M.5
Medugorac, I.6
Sölkner, J.7
Russo, V.8
Fontanesi, L.9
Friedmann, A.10
Soller, M.11
Lipkin, E.12
-
2
-
-
8544233572
-
Multiple quantitative trait loci mapping with cofactors and application of alternative variants of the false discovery rate in an enlarged granddaughter design
-
Bennewitz J., Reinsch N., Guiard V., Fritz S., Thomsen H., Looft C., Kühn C., Schwerin M., Weimann C., Erhardt G., Reinhardt F., Reents R., Boichard D., Kalm E. Multiple quantitative trait loci mapping with cofactors and application of alternative variants of the false discovery rate in an enlarged granddaughter design. Genetics 2004, 168:1019-1027.
-
(2004)
Genetics
, vol.168
, pp. 1019-1027
-
-
Bennewitz, J.1
Reinsch, N.2
Guiard, V.3
Fritz, S.4
Thomsen, H.5
Looft, C.6
Kühn, C.7
Schwerin, M.8
Weimann, C.9
Erhardt, G.10
Reinhardt, F.11
Reents, R.12
Boichard, D.13
Kalm, E.14
-
3
-
-
0038305610
-
Detection of genes influencing economic traits in three French dairy cattle breeds
-
Boichard D., Grohs C., Bourgeois F., Cerqueira F., Faugeras R., Neau A., Rupp R., Amigues Y., Boscher M.Y., Leveziel H. Detection of genes influencing economic traits in three French dairy cattle breeds. Genet. Sel. Evol. 2003, 35:77-101.
-
(2003)
Genet. Sel. Evol.
, vol.35
, pp. 77-101
-
-
Boichard, D.1
Grohs, C.2
Bourgeois, F.3
Cerqueira, F.4
Faugeras, R.5
Neau, A.6
Rupp, R.7
Amigues, Y.8
Boscher, M.Y.9
Leveziel, H.10
-
4
-
-
49749141656
-
A genome scan to detect quantitative trait loci for economically important traits in Holstein cattle using two methods and a dense single nucleotide polymorphism map
-
Daetwyler H.D., Schenkel F.S., Sargolzaei M., Robinson J.A.B. A genome scan to detect quantitative trait loci for economically important traits in Holstein cattle using two methods and a dense single nucleotide polymorphism map. J. Dairy Sci. 2008, 91:3225-3236.
-
(2008)
J. Dairy Sci.
, vol.91
, pp. 3225-3236
-
-
Daetwyler, H.D.1
Schenkel, F.S.2
Sargolzaei, M.3
Robinson, J.A.B.4
-
5
-
-
79960140387
-
paran: Horn's test of principal components/factors
-
R package version 1.4.3.
-
Dinno, A. 2010. paran: Horn's test of principal components/factors. R package version 1.4.3. http://www.cran.r-project.org/web/packages/paran/index.html.
-
(2010)
-
-
Dinno, A.1
-
6
-
-
0012302897
-
Multiple lactation random regression test-day model for Simmental and Brown Swiss in Germany and Austria
-
Emmerling R., Lidauer M., Mäntysaari E.A. Multiple lactation random regression test-day model for Simmental and Brown Swiss in Germany and Austria. Interbull Bull. 2002, 29:111-117.
-
(2002)
Interbull Bull.
, vol.29
, pp. 111-117
-
-
Emmerling, R.1
Lidauer, M.2
Mäntysaari, E.A.3
-
7
-
-
12144285594
-
Assessing the impact of population stratification on genetic association studies
-
Freedman M.L., Reich D., Penney K.L., McDonald G.J., Mignault A.A., Patterson N., Gabriel S.B., Topol E.J., Smoller J.W., Pato C.N., Pato M.T., Petryshen T.L., Kolonel L.N., Lander E.S., Sklar P., Henderson B., Hirschhorn J.N., Altshuler D. Assessing the impact of population stratification on genetic association studies. Nat. Genet. 2004, 36:388-393.
-
(2004)
Nat. Genet.
, vol.36
, pp. 388-393
-
-
Freedman, M.L.1
Reich, D.2
Penney, K.L.3
McDonald, G.J.4
Mignault, A.A.5
Patterson, N.6
Gabriel, S.B.7
Topol, E.J.8
Smoller, J.W.9
Pato, C.N.10
Pato, M.T.11
Petryshen, T.L.12
Kolonel, L.N.13
Lander, E.S.14
Sklar, P.15
Henderson, B.16
Hirschhorn, J.N.17
Altshuler, D.18
-
8
-
-
77949854404
-
Deregressing estimated breeding values and weighting information for genomic regression analyses
-
Garrick D.J., Taylor J.F., Fernando R.L. Deregressing estimated breeding values and weighting information for genomic regression analyses. Genet. Sel. Evol. 2009, 41:55.
-
(2009)
Genet. Sel. Evol.
, vol.41
, pp. 55
-
-
Garrick, D.J.1
Taylor, J.F.2
Fernando, R.L.3
-
9
-
-
33947400230
-
A simple method to approximate gene content in large pedigree populations: Application to the myostatin gene in dual-purpose Belgian Blue cattle
-
Gengler N., Mayeres P., Szydlowski M. A simple method to approximate gene content in large pedigree populations: Application to the myostatin gene in dual-purpose Belgian Blue cattle. Animal 2007, 1:21-28.
-
(2007)
Animal
, vol.1
, pp. 21-28
-
-
Gengler, N.1
Mayeres, P.2
Szydlowski, M.3
-
10
-
-
65449132092
-
Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds
-
Gibbs R.A., Taylor J.F., Van Tassell C.P., Barendse W., Eversole K.A, Gill C.A., Green R.D., Hamernik D.L., Kappes S.M., Lien S., Matukumalli L.K., McEwan J.C., Nazareth L.V., Schnabel R.D., Weinstock G.M., Wheeler D.A., Ajmone-Marsan P., Boettcher P.J., Caetano A.R., Garcia J.F., Hanotte O., Mariani P., Skow L.C., Sonstegard T.S., Williams J.L., Diallo B., Hailemariam L., Martinez M.L., Morris C.A., Silva L.O.C., Spelman R.J., Mulatu W., Zhao K., Abbey C.A., Agaba M., Araujo F.R., Bunch R.J., Burton J., Gorni C., Olivier H., Harrison B.E., Luff B., Machado M.A., Mwakaya J., Plastow G., Sim W., Smith T., Thomas M.B., Valentini A., Williams P., Womack J., Woolliams J.A., Liu Y., Qin X., Worley K.C., Gao C., Jiang H., Moore S.S., Ren Y., Song X.-Z., Bustamante C.D., Hernandez R.D., Muzny D.M., Patil S., San Lucas A., Fu Q., Kent M.P., Vega R., Matukumalli A., McWilliam S., Sclep G., Bryc K., Choi J., Gao H., Grefenstette J.J., Murdoch B., Stella A., Villa-Angulo R., Wright M., Aerts J., Jann O., Negrini R., Goddard M.E., Hayes B.J., Bradley D.G., Barbosa Da Silva M., Lau L.P.L., Liu G.E., Lynn D.J., Panzitta F., Dodds K.G. Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds. Science 2009, 324:528-532.
-
(2009)
Science
, vol.324
, pp. 528-532
-
-
Gibbs, R.A.1
Taylor, J.F.2
Van Tassell, C.P.3
Barendse, W.4
.Eversole, K.A.5
Gill, C.A.6
Green, R.D.7
Hamernik, D.L.8
Kappes, S.M.9
Lien, S.10
Matukumalli, L.K.11
McEwan, J.C.12
Nazareth, L.V.13
Schnabel, R.D.14
Weinstock, G.M.15
Wheeler, D.A.16
Ajmone-Marsan, P.17
Boettcher, P.J.18
Caetano, A.R.19
Garcia, J.F.20
Hanotte, O.21
Mariani, P.22
Skow, L.C.23
Sonstegard, T.S.24
Williams, J.L.25
Diallo, B.26
Hailemariam, L.27
Martinez, M.L.28
Morris, C.A.29
Silva, L.O.C.30
Spelman, R.J.31
Mulatu, W.32
Zhao, K.33
Abbey, C.A.34
Agaba, M.35
Araujo, F.R.36
Bunch, R.J.37
Burton, J.38
Gorni, C.39
Olivier, H.40
Harrison, B.E.41
Luff, B.42
Machado, M.A.43
Mwakaya, J.44
Plastow, G.45
Sim, W.46
Smith, T.47
Thomas, M.B.48
Valentini, A.49
Williams, P.50
Womack, J.51
Woolliams, J.A.52
Liu, Y.53
Qin, X.54
Worley, K.C.55
Gao, C.56
Jiang, H.57
Moore, S.S.58
Ren, Y.59
Song, X.-Z.60
Bustamante, C.D.61
Hernandez, R.D.62
Muzny, D.M.63
Patil, S.64
San Lucas, A.65
Fu, Q.66
Kent, M.P.67
Vega, R.68
Matukumalli, A.69
McWilliam, S.70
Sclep, G.71
Bryc, K.72
Choi, J.73
Gao, H.74
Grefenstette, J.J.75
Murdoch, B.76
Stella, A.77
Villa-Angulo, R.78
Wright, M.79
Aerts, J.80
Jann, O.81
Negrini, R.82
Goddard, M.E.83
Hayes, B.J.84
Bradley, D.G.85
Barbosa Da Silva, M.86
Lau, L.P.L.87
Liu, G.E.88
Lynn, D.J.89
Panzitta, F.90
Dodds, K.G.91
more..
-
11
-
-
0036175484
-
Positional candidate cloning of a QTL in dairy cattle: Identification of a missense mutation in the bovine DGAT1 gene with major effect on milk yield and composition
-
Grisart B., Coppieters W., Farnir F., Karim L., Ford C., Berzi P., Cambisano N., Mni M., Reid S., Simon P., Spelman R., Georges M., Snell R. Positional candidate cloning of a QTL in dairy cattle: Identification of a missense mutation in the bovine DGAT1 gene with major effect on milk yield and composition. Genome Res. 2002, 12:222-231.
-
(2002)
Genome Res.
, vol.12
, pp. 222-231
-
-
Grisart, B.1
Coppieters, W.2
Farnir, F.3
Karim, L.4
Ford, C.5
Berzi, P.6
Cambisano, N.7
Mni, M.8
Reid, S.9
Simon, P.10
Spelman, R.11
Georges, M.12
Snell, R.13
-
12
-
-
8644267207
-
A rationale and test for the number of factors in factor analysis
-
Horn J.L. A rationale and test for the number of factors in factor analysis. Psychometrika 1965, 30:179-185.
-
(1965)
Psychometrika
, vol.30
, pp. 179-185
-
-
Horn, J.L.1
-
14
-
-
2342505318
-
The varimax method of factor analysis.
-
PhD Diss. University of California, Berkeley.
-
Kaiser, H. F. 1956. The varimax method of factor analysis. PhD Diss. University of California, Berkeley.
-
(1956)
-
-
Kaiser, H.F.1
-
15
-
-
1442314052
-
Quantitative trait loci mapping in dairy cattle: Review and meta-analysis
-
Khatkar M.S., Thomson P.C., Tammen I., Raadsma H.W. Quantitative trait loci mapping in dairy cattle: Review and meta-analysis. Genet. Sel. Evol. 2004, 36:163-190.
-
(2004)
Genet. Sel. Evol.
, vol.36
, pp. 163-190
-
-
Khatkar, M.S.1
Thomson, P.C.2
Tammen, I.3
Raadsma, H.W.4
-
16
-
-
0028090414
-
Genetic dissection of complex traits
-
Lander E.S., Schork N.J. Genetic dissection of complex traits. Science 1994, 265:2037-2048.
-
(1994)
Science
, vol.265
, pp. 2037-2048
-
-
Lander, E.S.1
Schork, N.J.2
-
17
-
-
0032065226
-
Mapping of serum amylase-1 and quantitative trait loci for milk production traits to cattle chromosome 4
-
Lindersson M., Andersson-Eklund L., de Koning D.-J., Lundén A., Mäki-Tanila A., Andersson L. Mapping of serum amylase-1 and quantitative trait loci for milk production traits to cattle chromosome 4. J. Dairy Sci. 1998, 81:1454-1461.
-
(1998)
J. Dairy Sci.
, vol.81
, pp. 1454-1461
-
-
Lindersson, M.1
Andersson-Eklund, L.2
de Koning, D.-J.3
Lundén, A.4
Mäki-Tanila, A.5
Andersson, L.6
-
18
-
-
2142816799
-
Quantitative trait loci mapping for dairy cattle production traits using a maximum likelihood method
-
Liu Y., Jansen G.B., Lin C.Y. Quantitative trait loci mapping for dairy cattle production traits using a maximum likelihood method. J. Dairy Sci. 2004, 87:491-500.
-
(2004)
J. Dairy Sci.
, vol.87
, pp. 491-500
-
-
Liu, Y.1
Jansen, G.B.2
Lin, C.Y.3
-
19
-
-
0035140648
-
Detection of QTL for milk production on chromosomes 1 and 6 of Holstein cattle
-
Nadesalingam J., Plante Y., Gibson J.P. Detection of QTL for milk production on chromosomes 1 and 6 of Holstein cattle. Mamm. Genome 2001, 12:27-31.
-
(2001)
Mamm. Genome
, vol.12
, pp. 27-31
-
-
Nadesalingam, J.1
Plante, Y.2
Gibson, J.P.3
-
20
-
-
84865336369
-
A whole-genome population structure analysis within cattle breeds
-
PhD Diss. Ludwig-Maximilians-University Munich, Munich, Germany.
-
Neuditschko, M. 2011. A whole-genome population structure analysis within cattle breeds. PhD Diss. Ludwig-Maximilians-University Munich, Munich, Germany.
-
(2011)
-
-
Neuditschko, M.1
-
22
-
-
0035375269
-
Detection of quantitative trait loci affecting milk production traits on 10 chromosomes in Holstein cattle
-
Plante Y., Gibson J.P., Nadesalingam J., Mehrabani-Yeganeh H., Lefebvre S., Vandervoort G., Jansen G.B. Detection of quantitative trait loci affecting milk production traits on 10 chromosomes in Holstein cattle. J. Dairy Sci. 2001, 84:1516-1524.
-
(2001)
J. Dairy Sci.
, vol.84
, pp. 1516-1524
-
-
Plante, Y.1
Gibson, J.P.2
Nadesalingam, J.3
Mehrabani-Yeganeh, H.4
Lefebvre, S.5
Vandervoort, G.6
Jansen, G.B.7
-
23
-
-
77958091897
-
Reconciling the analysis of IBD and IBS in complex trait studies
-
Powell J.E., Visscher P.M., Goddard M.E. Reconciling the analysis of IBD and IBS in complex trait studies. Nat. Rev. Genet. 2010, 11:800-805.
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 800-805
-
-
Powell, J.E.1
Visscher, P.M.2
Goddard, M.E.3
-
24
-
-
33746512512
-
Principal components analysis corrects for stratification in genome-wide association studies
-
Price A.L., Patterson N.J., Plenge R.M., Weinblatt M.E., Shadick N.A., Reich D. Principal components analysis corrects for stratification in genome-wide association studies. Nat. Genet. 2006, 38:904-909.
-
(2006)
Nat. Genet.
, vol.38
, pp. 904-909
-
-
Price, A.L.1
Patterson, N.J.2
Plenge, R.M.3
Weinblatt, M.E.4
Shadick, N.A.5
Reich, D.6
-
25
-
-
0033926805
-
Association mapping in structured populations
-
Pritchard J.K., Stephens M., Rosenberg N.A., Donnelly P. Association mapping in structured populations. Am. J. Hum. Genet. 2000, 67:170-181.
-
(2000)
Am. J. Hum. Genet.
, vol.67
, pp. 170-181
-
-
Pritchard, J.K.1
Stephens, M.2
Rosenberg, N.A.3
Donnelly, P.4
-
26
-
-
84856265264
-
Combining evidence of selection with association analysis increases power to detect regions influencing complex traits in dairy cattle
-
Schwarzenbacher H., Dolezal M., Flisikowski K., Seefried F., Wurmser C., Schlötterer C., Fries R. Combining evidence of selection with association analysis increases power to detect regions influencing complex traits in dairy cattle. BMC Genomics 2012, 13:48.
-
(2012)
BMC Genomics
, vol.13
, pp. 48
-
-
Schwarzenbacher, H.1
Dolezal, M.2
Flisikowski, K.3
Seefried, F.4
Wurmser, C.5
Schlötterer, C.6
Fries, R.7
-
27
-
-
0042424602
-
Statistical significance for genome-wide experiments
-
Storey J.D., Tibshirani R. Statistical significance for genome-wide experiments. Proc. Natl. Acad. Sci. USA 2003, 100:9440-9445.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 9440-9445
-
-
Storey, J.D.1
Tibshirani, R.2
-
28
-
-
70449376986
-
Effects of DGAT1 and GHR on milk yield and milk composition in the Chinese dairy population
-
Sun D., Jia J., Ma Y., Zhang Y., Wang Y., Yu Y., Zhang Y. Effects of DGAT1 and GHR on milk yield and milk composition in the Chinese dairy population. Anim. Genet. 2009, 40:997-1000.
-
(2009)
Anim. Genet.
, vol.40
, pp. 997-1000
-
-
Sun, D.1
Jia, J.2
Ma, Y.3
Zhang, Y.4
Wang, Y.5
Yu, Y.6
Zhang, Y.7
-
29
-
-
34548046772
-
A heuristic two-dimensional presentation of microsatellite-based data applied to dogs and wolves
-
Veit-Kensch C.E., Medugorac I., Jedrzejewski W., Bunevich A.N., Foerster M. A heuristic two-dimensional presentation of microsatellite-based data applied to dogs and wolves. Genet. Sel. Evol. 2007, 39:447-463.
-
(2007)
Genet. Sel. Evol.
, vol.39
, pp. 447-463
-
-
Veit-Kensch, C.E.1
Medugorac, I.2
Jedrzejewski, W.3
Bunevich, A.N.4
Foerster, M.5
-
30
-
-
0021566877
-
Estimating F-statistics for the analysis of population structure
-
Weir B.S., Cockerham C.C. Estimating F-statistics for the analysis of population structure. Evolution 1984, 38:1358-1370.
-
(1984)
Evolution
, vol.38
, pp. 1358-1370
-
-
Weir, B.S.1
Cockerham, C.C.2
-
31
-
-
0141462810
-
Population-wide analysis of a QTL affecting milk-fat production in the Israeli Holstein population
-
Weller J.I., Golik M., Seroussi E., Ezra E., Ron M. Population-wide analysis of a QTL affecting milk-fat production in the Israeli Holstein population. J. Dairy Sci. 2003, 86:2219-2227.
-
(2003)
J. Dairy Sci.
, vol.86
, pp. 2219-2227
-
-
Weller, J.I.1
Golik, M.2
Seroussi, E.3
Ezra, E.4
Ron, M.5
-
33
-
-
0037047067
-
Association of a lysine-232/alanine polymorphism in a bovine gene encoding acyl-CoA:diacylglycerol acyltransferase (DGAT1) with variation at a quantitative trait locus for milk fat content
-
Winter A., Krämer W., Werner F.A.O., Kollers S., Kata S., Durstewitz G., Buitkamp J., Womack J.E., Thaller G., Fries R. Association of a lysine-232/alanine polymorphism in a bovine gene encoding acyl-CoA:diacylglycerol acyltransferase (DGAT1) with variation at a quantitative trait locus for milk fat content. Proc. Natl. Acad. Sci. USA 2002, 99:9300-9305.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 9300-9305
-
-
Winter, A.1
Krämer, W.2
Werner, F.A.O.3
Kollers, S.4
Kata, S.5
Durstewitz, G.6
Buitkamp, J.7
Womack, J.E.8
Thaller, G.9
Fries, R.10
-
34
-
-
0038768198
-
A genetic history of the Brown Swiss cattle in the United States
-
Yoder D.M., Lush J.L. A genetic history of the Brown Swiss cattle in the United States. J. Hered. 1937, 28:154-160.
-
(1937)
J. Hered.
, vol.28
, pp. 154-160
-
-
Yoder, D.M.1
Lush, J.L.2
-
35
-
-
31744440502
-
A unified mixed-model method for association mapping that accounts for multiple levels of relatedness
-
Yu J., Pressoir G., Briggs W.H., Vroh Bi I., Yamasaki M., Doebley J.F., McMullen M.D., Gaut B.S., Nielsen D.M., Holland J.B., Kresovich S., Buckler E.S. A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nat. Genet. 2006, 38:203-208.
-
(2006)
Nat. Genet.
, vol.38
, pp. 203-208
-
-
Yu, J.1
Pressoir, G.2
Briggs, W.H.3
Vroh Bi, I.4
Yamasaki, M.5
Doebley, J.F.6
McMullen, M.D.7
Gaut, B.S.8
Nielsen, D.M.9
Holland, J.B.10
Kresovich, S.11
Buckler, E.S.12
-
36
-
-
70450183883
-
Software engineering the mixed model for genome-wide association studies on large samples
-
Zhang Z., Buckler E.S., Casstevens T.M., Bradbury P.J. Software engineering the mixed model for genome-wide association studies on large samples. Brief. Bioinform. 2009, 10:664-675.
-
(2009)
Brief. Bioinform.
, vol.10
, pp. 664-675
-
-
Zhang, Z.1
Buckler, E.S.2
Casstevens, T.M.3
Bradbury, P.J.4
-
37
-
-
40749128980
-
A unified association analysis approach for family and unrelated samples correcting for stratification
-
Zhu X., Li S., Cooper R.S., Elston R.C. A unified association analysis approach for family and unrelated samples correcting for stratification. Am. J. Hum. Genet. 2008, 82:352-365.
-
(2008)
Am. J. Hum. Genet.
, vol.82
, pp. 352-365
-
-
Zhu, X.1
Li, S.2
Cooper, R.S.3
Elston, R.C.4
|