-
1
-
-
20444363444
-
Kinetics of inclusion body formation studied in intact cells by FT - IR spectroscopy
-
Ami, D., A. Natalello, P. Gatti - Lafranconi, M. Lotti, and S. M. Doglia. 2005. Kinetics of inclusion body formation studied in intact cells by FT - IR spectroscopy. FEBS Lett 579: 3433-6.
-
(2005)
FEBS Lett
, vol.579
, pp. 3433-3436
-
-
Ami, D.1
Natalello, A.2
Gatti-Lafranconi, P.3
Lotti, M.4
Doglia, S.M.5
-
2
-
-
33646589053
-
Structural analysis of protein inclusion bodies by Fourier transform infrared microspectroscopy
-
Ami, D., A. Natalello, G. Taylor, G. Tonon, and S. M. Doglia. 2006. Structural analysis of protein inclusion bodies by Fourier transform infrared microspectroscopy . Biochim Biophys Acta 1764: 793-9.
-
(2006)
Biochim Biophys Acta
, vol.1764
, pp. 793-799
-
-
Ami, D.1
Natalello, A.2
Taylor, G.3
Tonon, G.4
Doglia, S.M.5
-
3
-
-
0034700129
-
Multiple quantum solid - state NMR indicates a parallel, not antiparallel, organization of ß - sheets in Alzheimer ' s ß - amyloid fi brils
-
Antzutkin, O. N., J. J. Balbach, R. D. Leapman, N. W. Rizzo, J. Reed, and R. Tycko. 2000. Multiple quantum solid - state NMR indicates a parallel, not antiparallel, organization of ß - sheets in Alzheimer ' s ß - amyloid fi brils. Proc Natl Acad Sci U S A 97: 13045-50.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 13045-50
-
-
Antzutkin, O.N.1
Balbach, J.J.2
Leapman, R.D.3
Rizzo, N.W.4
Reed, J.5
Tycko, R.6
-
4
-
-
0344672542
-
Structure and dynamics of membrane proteins as studied by infrared spectroscopy
-
Arrondo, J. L. R., and F. M. Goni. 1999. Structure and dynamics of membrane proteins as studied by infrared spectroscopy. Prog Biophys Mol Biol 72: 367-405.
-
(1999)
Prog Biophys Mol Biol
, vol.72
, pp. 367-405
-
-
Arrondo, J.L.R.1
Goni, F.M.2
-
5
-
-
0027354020
-
Quantitative studies of the structure of proteins in solution by Fourier - transform infrared spectroscopy
-
Arrondo, J. L. R., A. Muga, J. Castresana, and F. M. Goni. 1993. Quantitative studies of the structure of proteins in solution by Fourier - transform infrared spectroscopy . Prog Biophys Mol Biol 59: 23-56.
-
(1993)
Prog Biophys Mol Biol
, vol.59
, pp. 23-56
-
-
Arrondo, J.L.R.1
Muga, A.2
Castresana, J.3
Goni, F.M.4
-
6
-
-
0034473318
-
The infrared absorption of amino acid side chains
-
Barth, A. 2000. The infrared absorption of amino acid side chains. Prog Biophys Mol Biol 74: 141-73.
-
(2000)
Prog Biophys Mol Biol
, vol.74
, pp. 141-173
-
-
Barth, A.1
-
7
-
-
34548165708
-
Infrared spectroscopy of proteins
-
Barth, A. 2007. Infrared spectroscopy of proteins. Biochim Biophys Acta 1767: 1073-101.
-
(2007)
Biochim Biophys Acta
, vol.1767
, pp. 1073-1101
-
-
Barth, A.1
-
8
-
-
0036880493
-
What vibrations tell us about proteins
-
Barth, A., and C. Zscherp. 2002. What vibrations tell us about proteins. Q Rev Biophys 35: 369-430.
-
(2002)
Q Rev Biophys
, vol.35
, pp. 369-430
-
-
Barth, A.1
Zscherp, C.2
-
9
-
-
0033584169
-
Identifi cation of beta - turn and random coil amide III infrared bands for secondary structure estimation of proteins
-
Cai, S. W., and B. R. Singh. 1999. Identifi cation of beta - turn and random coil amide III infrared bands for secondary structure estimation of proteins. Biophys Chem 80: 7-20.
-
(1999)
Biophys Chem
, vol.80
, pp. 7-20
-
-
Cai, S.W.1
Singh, B.R.2
-
10
-
-
1542357647
-
A distinct utility of the amide III infrared band for secondary structure estimation of aqueous protein solutions using partial least squares methods
-
Cai, S. W., and B. R. Singh. 2004. A distinct utility of the amide III infrared band for secondary structure estimation of aqueous protein solutions using partial least squares methods. Biochemistry 43: 2541-9.
-
(2004)
Biochemistry
, vol.43
, pp. 2541-2549
-
-
Cai, S.W.1
Singh, B.R.2
-
11
-
-
33746377894
-
Protein misfolding, functional amyloid, and human disease
-
Chiti, F., and C. M. Dobson. 2006. Protein misfolding, functional amyloid, and human disease. Annu Rev Biochem 75: 333-66.
-
(2006)
Annu Rev Biochem
, vol.75
, pp. 333-366
-
-
Chiti, F.1
Dobson, C.M.2
-
12
-
-
0032978519
-
The nucleation of monomeric parallel ß - sheet - like structures and their self - assembly in aqueous solution
-
Chitnumsub, P., W. R. Fiori, H. A. Lashuel, H. Diaz, and J. W. Kelly. 1999. The nucleation of monomeric parallel ß - sheet - like structures and their self - assembly in aqueous solution. Bioorg Med Chem 7: 39-59.
-
(1999)
Bioorg Med Chem
, vol.7
, pp. 39-59
-
-
Chitnumsub, P.1
Fiori, W.R.2
Lashuel, H.A.3
Diaz, H.4
Kelly, J.W.5
-
13
-
-
0025357111
-
Protein secondary structures in water from 2Nd - derivative amide - I infrared - spectra
-
Dong, A., P. Huang, and W. S. Caughey. 1990. Protein secondary structures in water from 2Nd - derivative amide - I infrared - spectra. Biochemistry 29: 3303-8.
-
(1990)
Biochemistry
, vol.29
, pp. 3303-3308
-
-
Dong, A.1
Huang, P.2
Caughey, W.S.3
-
14
-
-
0031573469
-
Spectroscopic study of secondary structure and thermal denaturation of recombinant human factor XIII in aqueous solution
-
Dong, A., B. Kendrick, L. kreilgard, J. Matsuura, M. C. Manning, and J. F. Carpenter. 1997. Spectroscopic study of secondary structure and thermal denaturation of recombinant human factor XIII in aqueous solution. Arch Biochem Biophys 347: 213-20.
-
(1997)
Arch Biochem Biophys
, vol.347
, pp. 213-220
-
-
Dong, A.1
Kendrick, B.2
kreilgard, L.3
Matsuura, J.4
Manning, M.C.5
Carpenter, J.F.6
-
15
-
-
0030249365
-
Differences in conformational dynamics of ribonucleases A and S as observed by infrared spectroscopy and hydrogen - deuterium exchange
-
Dong, A., R. M. Hyslop, and D. L. Pringle. 1996. Differences in conformational dynamics of ribonucleases A and S as observed by infrared spectroscopy and hydrogen - deuterium exchange. Arch Biochem Biophys 333: 275-81.
-
(1996)
Arch Biochem Biophys
, vol.333
, pp. 275-281
-
-
Dong, A.1
Hyslop, R.M.2
Pringle, D.L.3
-
16
-
-
84885552670
-
Structural analysis of proteins by infrared spectroscopy, pp. 9-23. In G. Pifat - Mrzljak (ed.), Supramolecular Structure and Function 5
-
Echabe, I., and J. L. R. Arrondo. 1997. Structural analysis of proteins by infrared spectroscopy, pp. 9-23. In G. Pifat - Mrzljak (ed.), Supramolecular Structure and Function 5. Balaban Publishers, Rehovot, Israel.
-
(1997)
Balaban Publishers, Rehovot, Israel.
-
-
Echabe, I.1
Arrondo, J.L.R.2
-
17
-
-
0026453127
-
Fibril formation by primate, rodent, and Dutch - hemorrhagic analogs of Alzheimer amyloid ß - protein
-
Fraser, P. E., J. T. Nguyen, H. Inouye, W. K. Surewicz, D. J. Selkoe, M. B. Podlisny, and D. A. Kirschner. 1992. Fibril formation by primate, rodent, and Dutch - hemorrhagic analogs of Alzheimer amyloid ß - protein. Biochemistry 31: 10716-23.
-
(1992)
Biochemistry
, vol.31
, pp. 10716-23
-
-
Fraser, P.E.1
Nguyen, J.T.2
Inouye, H.3
Surewicz, W.K.4
Selkoe, D.J.5
Podlisny, M.B.6
Kirschner, D.A.7
-
18
-
-
0028709475
-
Determination of soluble and membrane protein structure by Fourier transform infrared spectroscopy
-
Goormaghtigh, E., V. Cabiaux, and J. M. Ruysschaert. 1994. Determination of soluble and membrane protein structure by Fourier transform infrared spectroscopy. III. Secondary structures. Subcell Biochem 23: 405-50.
-
(1994)
III. Secondary structures. Subcell Biochem
, vol.23
, pp. 405-450
-
-
Goormaghtigh, E.1
Cabiaux, V.2
Ruysschaert, J.M.3
-
19
-
-
0032968077
-
Attenuated total refl ection infrared spectroscopy of proteins and lipids in biological membranes
-
Goormaghtigh, E., V. Raussens, and J. M. Ruysschaert. 1999. Attenuated total refl ection infrared spectroscopy of proteins and lipids in biological membranes. Biochim Biophys Acta 1422: 105-85.
-
(1999)
Biochim Biophys Acta
, vol.1422
, pp. 105-185
-
-
Goormaghtigh, E.1
Raussens, V.2
Ruysschaert, J.M.3
-
20
-
-
0038305931
-
Transition from natively unfolded to folded state induced by desiccation in an anhydrobiotic nematode protein
-
Goyal, K., L. Tisi, A. Basran, J. Browne, A. Burnell, J. Zurdo, and A. Tunnacliffe. 2003. Transition from natively unfolded to folded state induced by desiccation in an anhydrobiotic nematode protein. J Biol Chem 278: 12977-84.
-
(2003)
J Biol Chem
, vol.278
, pp. 12977-84
-
-
Goyal, K.1
Tisi, L.2
Basran, A.3
Browne, J.4
Burnell, A.5
Zurdo, J.6
Tunnacliffe, A.7
-
21
-
-
0030670258
-
The effects of chain length and thermal denaturation on helix - forming peptides: a mode - specifi c analysis using 2D FT - IR
-
Graff, D. K., B. PastranaRios, S. Y. Venyaminov, and F. G. Prendergast. 1997. The effects of chain length and thermal denaturation on helix - forming peptides: a mode - specifi c analysis using 2D FT - IR. J Am Chem Soc 119: 11282-94.
-
(1997)
J Am Chem Soc
, vol.119
, pp. 11282-94
-
-
Graff, D.K.1
Pastranarios, B.2
Venyaminov, S.Y.3
Prendergast, S.Y.4
-
22
-
-
0028062558
-
Analysis of polypeptide and protein structures using Fourier transform infrared spectroscopy
-
Haris, P. I., and D. Chapman. 1994. Analysis of polypeptide and protein structures using Fourier transform infrared spectroscopy. Methods Mol Biol 22: 183-202.
-
(1994)
Methods Mol Biol
, vol.22
, pp. 183-202
-
-
Haris, P.I.1
Chapman, D.2
-
23
-
-
0032818805
-
FTIR spectroscopic characterization of protein structure in aqueous and non - aqueous media
-
Haris, P. I., and F. Severcan. 1999. FTIR spectroscopic characterization of protein structure in aqueous and non - aqueous media. J Mol Catal B Enzym 7: 207-21.
-
(1999)
J Mol Catal B Enzym
, vol.7
, pp. 207-221
-
-
Haris, P.I.1
Severcan, F.2
-
24
-
-
0039182128
-
FTIR - spectroscopy of multistranded coiled coil proteins
-
Heimburg, T., J. Schunemann, K. Weber, and N. Geisler. 1999. FTIR - spectroscopy of multistranded coiled coil proteins. Biochemistry 38: 12727-34.
-
(1999)
Biochemistry
, vol.38
, pp. 12727-34
-
-
Heimburg, T.1
Schunemann, J.2
Weber, K.3
Geisler, N.4
-
25
-
-
0035997270
-
Automatic amide I frequency selection for rapid quantifi cation of protein secondary structure from Fourier transform infrared spectra of proteins
-
Hering, J. A., P. R. Innocent, and P. I. Haris. 2002. Automatic amide I frequency selection for rapid quantifi cation of protein secondary structure from Fourier transform infrared spectra of proteins. Proteomics 2: 839-49.
-
(2002)
Proteomics
, vol.2
, pp. 839-849
-
-
Hering, J.A.1
Innocent, P.R.2
Haris, P.I.3
-
26
-
-
9144274018
-
Role of individual methionines in the fi brillation of methionine - oxidized a - synuclein
-
Hokenson, M. J., V. N. Uversky, J. Goers, G. Yamin, L. A. Munishkina, and A. L. Fink. 2004. Role of individual methionines in the fi brillation of methionine - oxidized a - synuclein. Biochemistry 43: 4621-33.
-
(2004)
Biochemistry
, vol.43
, pp. 4621-4633
-
-
Hokenson, M.J.1
Uversky, V.N.2
Goers, J.3
Yamin, G.4
Munishkina, L.A.5
Fink, A.L.6
-
27
-
-
17044381327
-
Fibril conformation as the basis of species - and strain - dependent seeding specifi city of mammalian prion amyloids
-
Jones, E. M., and W. K. Surewicz. 2005. Fibril conformation as the basis of species - and strain - dependent seeding specifi city of mammalian prion amyloids. Cell 121: 63-72.
-
(2005)
Cell
, vol.121
, pp. 63-72
-
-
Jones, E.M.1
Surewicz, W.K.2
-
28
-
-
0035811052
-
Lifetimes of intermediates in the ß - sheet to a - helix transition of ß - lactoglobulin by using a diffusional IR mixer
-
Kauffmann, E., N. C. Darnton, R. H. Austin, C. Batt, and K. Gerwert. 2001. Lifetimes of intermediates in the ß - sheet to a - helix transition of ß - lactoglobulin by using a diffusional IR mixer. Proc Natl Acad Sci U S A 98: 6646-9.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 6646-6649
-
-
Kauffmann, E.1
Darnton, N.C.2
Austin, R.H.3
Batt, C.4
Gerwert, K.5
-
29
-
-
0000337013
-
Fourier self - deconvolution - a method for resolving intrinsically overlapped bands
-
Kauppinen, J. K., D. J. Moffatt, H. H. Mantsch, and D. G. Cameron. 1981. Fourier self - deconvolution - a method for resolving intrinsically overlapped bands. Appl Spectrosc 35: 271-6.
-
(1981)
Appl Spectrosc
, vol.35
, pp. 271-276
-
-
Kauppinen, J.K.1
Moffatt, D.J.2
Mantsch, H.H.3
Cameron, D.G.4
-
30
-
-
0034076545
-
Do parallel ß - helix proteins have a unique Fourier transform infrared spectrum
-
Khurana, R., and A. L. Fink. 2000. Do parallel ß - helix proteins have a unique Fourier transform infrared spectrum? Biophys J 78: 994-1000.
-
(2000)
Biophys J
, vol.78
, pp. 994-1000
-
-
Khurana, R.1
Fink, A.L.2
-
31
-
-
51649090393
-
Dehydration of main - chain amides in the fi nal folding step of single - chain monellin revealed by time - resolved infrared spectroscopy
-
Kimura, T., A. Maeda, S. Nishiguchi, K. Ishimori, I. Morishima, T. Konno, Y. Goto, and S. Takahashi. 2008. Dehydration of main - chain amides in the fi nal folding step of single - chain monellin revealed by time - resolved infrared spectroscopy . Proc Natl Acad Sci U S A 105: 13391-6.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 13391-6
-
-
Kimura, T.1
Maeda, A.2
Nishiguchi, S.3
Ishimori, K.4
Morishima, I.5
Konno, T.6
Goto, Y.7
Takahashi, S.8
-
32
-
-
0035814332
-
Differentiation of beta - sheet - forming structures: ab initio - based simulations of IR absorption and vibrational CD for model peptide and protein ß - sheets
-
Kubelka, J., and T. A. Keiderling. 2001. Differentiation of beta - sheet - forming structures: ab initio - based simulations of IR absorption and vibrational CD for model peptide and protein ß - sheets. J Am Chem Soc 123: 12048-58.
-
(2001)
J Am Chem Soc
, vol.123
, pp. 12048-58
-
-
Kubelka, J.1
Keiderling, T.A.2
-
33
-
-
1542743970
-
Induced a - helix structure in AF1 of the androgen receptor upon binding transcription factor TFIIF
-
Kumar, R., R. Betney, J. Q. Li, E. B. Thompson, and I. J. Mcewan. 2004. Induced a - helix structure in AF1 of the androgen receptor upon binding transcription factor TFIIF. Biochemistry 43: 3008-13.
-
(2004)
Biochemistry
, vol.43
, pp. 3008-3013
-
-
Kumar, R.1
Betney, R.2
Li, J.Q.3
Thompson, E.B.4
Mcewan, I.J.5
-
34
-
-
9344227341
-
TATA box binding protein induces structure in the recombinant glucocorticoid receptor AF1 domain
-
Kumar, R., D. E. Volk, J. Q. Li, J. C. Lee, D. G. Gorenstein, and E. B. Thompson. 2004. TATA box binding protein induces structure in the recombinant glucocorticoid receptor AF1 domain. Proc Natl Acad Sci U S A 101: 16425-30.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 16425-30
-
-
Kumar, R.1
Volk, D.E.2
Li, J.Q.3
Lee, J.C.4
Gorenstein, D.G.5
Thompson, E.B.6
-
35
-
-
0142091396
-
Nucleation - dependent conformational conversion of the Y145Stop variant of human prion protein: structural clues for prion propagation
-
Kundu, B., N. R. Maiti, E. M. Jones, K. A. Surewicz, D. L. Vanik, and W. K. Surewicz. 2003. Nucleation - dependent conformational conversion of the Y145Stop variant of human prion protein: structural clues for prion propagation. Proc Natl Acad Sci U S A 100: 12069-74.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 12069-74
-
-
Kundu, B.1
Maiti, N.R.2
Jones, E.M.3
Surewicz, K.A.4
Vanik, D.L.5
Surewicz, W.K.6
-
36
-
-
0035949709
-
Solid - state NMR studies of the secondary structure of a mutant prion protein fragment of 55 residues that induces neurodegeneration
-
Laws, D. D., H. L. Bitter, K. Liu, H. L. Ball, K. Kaneko, H. Wille, F. E. Cohen, S. B. Prusiner, A. Pines, and D. E. Wemmer. 2001. Solid - state NMR studies of the secondary structure of a mutant prion protein fragment of 55 residues that induces neurodegeneration. Proc Natl Acad Sci U S A 98: 11686-90.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 11686-90
-
-
Laws, D.D.1
Bitter, H.L.2
Liu, K.3
Ball, H.L.4
Kaneko, K.5
Wille, H.6
Cohen, F.E.7
Prusiner, S.B.8
Pines, A.9
Wemmer, D.E.10
-
37
-
-
0035949542
-
Effect of familial Parkinson ' s disease point mutations A30P and A53T on the structural properties, aggregation, and fi brillation of human a - synuclein
-
Li, J., V. N. Uversky, and A. L. Fink. 2001. Effect of familial Parkinson ' s disease point mutations A30P and A53T on the structural properties, aggregation, and fi brillation of human a - synuclein. Biochemistry 40: 11604-13.
-
(2001)
Biochemistry
, vol.40
, pp. 11604-13
-
-
Li, J.1
Uversky, V.N.2
Fink, A.L.3
-
38
-
-
0036777533
-
Conformational behavior of human a - synuclein is modulated by familial Parkinson ' s disease point mutations A30P and A53T
-
Li, J., V. N. Uversky, and A. L. Fink. 2002. Conformational behavior of human a - synuclein is modulated by familial Parkinson ' s disease point mutations A30P and A53T. Neurotoxicology 23: 553-67.
-
(2002)
Neurotoxicology
, vol.23
, pp. 553-567
-
-
Li, J.1
Uversky, V.N.2
Fink, A.L.3
-
39
-
-
0029064280
-
Ftir spectroscopy of alanine - based peptides: assignment of the amide i ' modes for random coil and helix
-
Martinez, G., and G. Millhauser. 1995. Ftir spectroscopy of alanine - based peptides: assignment of the amide i ' modes for random coil and helix. J Struct Biol 114: 23-7.
-
(1995)
J Struct Biol
, vol.114
, pp. 23-27
-
-
Martinez, G.1
Millhauser, G.2
-
40
-
-
0037432332
-
Conformational behavior and aggregation of a - synuclein in organic solvents: modeling the effects of membranes
-
Munishkina, L. A., C. Phelan, V. N. Uversky, and A. L. Fink. 2003. Conformational behavior and aggregation of a - synuclein in organic solvents: modeling the effects of membranes. Biochemistry 42: 2720-30.
-
(2003)
Biochemistry
, vol.42
, pp. 2720-2730
-
-
Munishkina, L.A.1
Phelan, C.2
Uversky, V.N.3
Fink, A.L.4
-
41
-
-
12844274977
-
Secondary structure, conformational stability and glycosylation of a recombinant Candida rugosa lipase studied by Fourier - transform infrared spectroscopy
-
Natalello, A., D. Ami, S. Brocca, M. Lotti, and S. M. Doglia. 2005. Secondary structure, conformational stability and glycosylation of a recombinant Candida rugosa lipase studied by Fourier - transform infrared spectroscopy. Biochem J 385: 511-7.
-
(2005)
Biochem J
, vol.385
, pp. 511-517
-
-
Natalello, A.1
Ami, D.2
Brocca, S.3
Lotti, M.4
Doglia, S.M.5
-
42
-
-
33846243823
-
Role of fl avin mononucleotide in the thermostability and oligomerization of Escherichia coli stress - defense protein WrbA
-
Natalello, A., S. M. Doglia, J. Carey, and R. Grandori. 2007. Role of fl avin mononucleotide in the thermostability and oligomerization of Escherichia coli stress - defense protein WrbA. Biochemistry 46: 543-53.
-
(2007)
Biochemistry
, vol.46
, pp. 543-553
-
-
Natalello, A.1
Doglia, S.M.2
Carey, J.3
Grandori, R.4
-
43
-
-
48749090708
-
Conformational plasticity of the Gerstmann - Str ä ussler - Scheinker disease peptide as indicated by its multiple aggregation pathways
-
Natalello, A., V. V. Prokorov, F. Tagliavini, M. Morbin, G. Forloni, M. Beeg, C. Manzoni, L. Colombo, M. Gobbi, M. Salmona, and S. M. Doglia. 2008. Conformational plasticity of the Gerstmann - Str ä ussler - Scheinker disease peptide as indicated by its multiple aggregation pathways. J Mol Biol 381: 1349-61.
-
(2008)
J Mol Biol
, vol.381
, pp. 1349-1361
-
-
Natalello, A.1
Prokorov, V.V.2
Tagliavini, F.3
Morbin, M.4
Forloni, G.5
Beeg, M.6
Manzoni, C.7
Colombo, L.8
Gobbi, M.9
Salmona, M.10
Doglia, S.M.11
-
44
-
-
39649101910
-
Physical and chemical perturbations induce the formation of protein aggregates with different structural features
-
Natalello, A., R. Santarella, S. M. Doglia, and A. de Marco. 2008. Physical and chemical perturbations induce the formation of protein aggregates with different structural features. Protein Expr Purif 58: 356-61.
-
(2008)
Protein Expr Purif
, vol.58
, pp. 356-361
-
-
Natalello, A.1
Santarella, R.2
Doglia, S.M.3
de Marco, A.4
-
45
-
-
34548849769
-
Solvation and desolvation dynamics in apomyoglobin folding monitored by time - resolved infrared spectroscopy
-
Nishiguchi, S., Y. Goto, and S. Takahashi. 2007. Solvation and desolvation dynamics in apomyoglobin folding monitored by time - resolved infrared spectroscopy. J Mol Biol 373: 491-502.
-
(2007)
J Mol Biol
, vol.373
, pp. 491-502
-
-
Nishiguchi, S.1
Goto, Y.2
Takahashi, S.3
-
46
-
-
0036228355
-
Conformational changes and orientation of Humicola lanuginosa lipase on a solid hydrophobic surface: an in situ interface Fourier transform infrared - attenuated total refl ection study
-
Noinville, S., M. Revault, M. H. Baron, A. Tiss, S. Yapoudjian, M. Ivanova, and R. Verger. 2002. Conformational changes and orientation of Humicola lanuginosa lipase on a solid hydrophobic surface: an in situ interface Fourier transform infrared - attenuated total refl ection study. Biophys J 82: 2709-19.
-
(2002)
Biophys J
, vol.82
, pp. 2709-2719
-
-
Noinville, S.1
Revault, M.2
Baron, M.H.3
Tiss, A.4
Yapoudjian, S.5
Ivanova, M.6
Verger, R.7
-
47
-
-
0035822625
-
Mechanism of unfolding of a model helical peptide
-
Pastrana - Rios, B. 2001. Mechanism of unfolding of a model helical peptide. Biochemistry 40: 9074-81.
-
(2001)
Biochemistry
, vol.40
, pp. 9074-9081
-
-
Pastrana-Rios, B.1
-
48
-
-
0034650323
-
Spectroscopic methods for analysis of protein secondary structure
-
Pelton, J. T., and L. R. Mclean. 2000. Spectroscopic methods for analysis of protein secondary structure. Anal Biochem 277: 167-76.
-
(2000)
Anal Biochem
, vol.277
, pp. 167-176
-
-
Pelton, J.T.1
Mclean, L.R.2
-
49
-
-
43449118401
-
Time - resolved infrared spectroscopy of pH - Induced aggregation of the Alzheimer A ß 1-28 peptide
-
Peralvarez - Marin, A., A. Barth, and A. Graslund. 2008. Time - resolved infrared spectroscopy of pH - Induced aggregation of the Alzheimer A ß 1-28 peptide. J Mol Biol 379: 589-96.
-
(2008)
J Mol Biol
, vol.379
, pp. 589-596
-
-
Peralvarez-Marin, A.1
Barth, A.2
Graslund, A.3
-
50
-
-
0031070340
-
Infrared spectroscopy in aqueous solution: diffi culties and accuracy of water subtraction
-
Rahmelow, K., and W. Hubner. 1997. Infrared spectroscopy in aqueous solution: diffi culties and accuracy of water subtraction. Appl Spectrosc 51: 160-70.
-
(1997)
Appl Spectrosc
, vol.51
, pp. 160-170
-
-
Rahmelow, K.1
Hubner, W.2
-
51
-
-
33644867420
-
Association of a - synuclein and mutants with lipid membranes: spin - label ESR and polarized IR
-
Ramakrishnan, M., P. H. Jensen, and D. Marsh. 2006. Association of a - synuclein and mutants with lipid membranes: spin - label ESR and polarized IR. Biochemistry 45: 3386-95.
-
(2006)
Biochemistry
, vol.45
, pp. 3386-3395
-
-
Ramakrishnan, M.1
Jensen, P.H.2
Marsh, D.3
-
52
-
-
30344432688
-
Assessing protein disorder and induced folding
-
Receveur - Brechot, V., J. M. Bourhis, V. N. Uversky, B. Canard, and S. Longhi. 2006. Assessing protein disorder and induced folding. Proteins 62: 24-45.
-
(2006)
Proteins
, vol.62
, pp. 24-45
-
-
Receveur-Brechot, V.1
Bourhis, J.M.2
Uversky, V.N.3
Canard, B.4
Longhi, S.5
-
53
-
-
25444523218
-
DNA - induced secondary structure of the carboxyl - terminal domain of histone H1
-
Roque, A., I. Iloro, I. Ponte, J. L. R. Arrondo, and P. Suau. 2005. DNA - induced secondary structure of the carboxyl - terminal domain of histone H1. J Biol Chem 280: 32141-7.
-
(2005)
J Biol Chem
, vol.280
, pp. 32141-7
-
-
Roque, A.1
Iloro, I.2
Ponte, I.3
Arrondo, J.L.R.4
Suau, P.5
-
54
-
-
34548722169
-
Macromolecular crowding induces a molten globule state in the C - terminal domain of histone H1
-
Roque, A., I. Ponte, and P. Suau. 2007. Macromolecular crowding induces a molten globule state in the C - terminal domain of histone H1. Biophys J 93: 2170-7.
-
(2007)
Biophys J
, vol.93
, pp. 2170-2177
-
-
Roque, A.1
Ponte, I.2
Suau, P.3
-
55
-
-
49249102932
-
Phosphorylation of the carboxy - terminal domain of histone H1: effects on secondary structure and DNA condensation
-
Roque, A., I. Ponte, J. L. Arrondo, and P. Suau. 2008. Phosphorylation of the carboxy - terminal domain of histone H1: effects on secondary structure and DNA condensation. Nucleic Acids Res 36: 4719-26.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 4719-4726
-
-
Roque, A.1
Ponte, I.2
Arrondo, J.L.3
Suau, P.4
-
56
-
-
0032831759
-
Fourier transform infrared spectroscopy in analysis of protein deposits
-
Seshadri, S., R. Khurana, and A. L. Fink. 1999. Fourier transform infrared spectroscopy in analysis of protein deposits. Methods Enzymol 309: 559-76.
-
(1999)
Methods Enzymol
, vol.309
, pp. 559-576
-
-
Seshadri, S.1
Khurana, R.2
Fink, A.L.3
-
57
-
-
33745058355
-
Structural differences between TSEs strains investigated by FT - IR spectroscopy
-
Spassov, S., M. Beekes, and D. Naumann. 2006. Structural differences between TSEs strains investigated by FT - IR spectroscopy. Biochim Biophys Acta 1760: 1138-49.
-
(2006)
Biochim Biophys Acta
, vol.1760
, pp. 1138-1149
-
-
Spassov, S.1
Beekes, M.2
Naumann, D.3
-
58
-
-
0027492164
-
Determination of protein secondary structure by Fourier - transform infrared - spectroscopy - a critical - assessment
-
Surewicz, W. K., H. H. Mantsch, and D. Chapman. 1993. Determination of protein secondary structure by Fourier - transform infrared - spectroscopy - a critical - assessment . Biochemistry 32: 389-94.
-
(1993)
Biochemistry
, vol.32
, pp. 389-394
-
-
Surewicz, W.K.1
Mantsch, H.H.2
Chapman, D.3
-
59
-
-
0023837785
-
New insight into protein secondary structure from resolution - enhanced infrared spectra
-
Surewicz, W. K., and H. H. Mantsch. 1988. New insight into protein secondary structure from resolution - enhanced infrared spectra. Biochim Biophys Acta 952: 115-30.
-
(1988)
Biochim Biophys Acta
, vol.952
, pp. 115-130
-
-
Surewicz, W.K.1
Mantsch, H.H.2
-
60
-
-
0015438002
-
Infrared spectroscopy - conformation
-
Susi, H. 1972. Infrared spectroscopy - conformation. Methods Enzymol 26: 455-472.
-
(1972)
Methods Enzymol
, vol.26
, pp. 455-472
-
-
Susi, H.1
-
61
-
-
0022463740
-
Resolution - enhanced Fourier transform infrared spectroscopy of enzymes
-
Susi, H., and D. M. Byler. 1986. Resolution - enhanced Fourier transform infrared spectroscopy of enzymes. Methods Enzymol 130: 290-311.
-
(1986)
Methods Enzymol
, vol.130
, pp. 290-311
-
-
Susi, H.1
Byler, D.M.2
-
62
-
-
0023442501
-
Fourier - transform infrared study of proteins with parallel ß - chains
-
Susi, H., and D. M. Byler. 1987. Fourier - transform infrared study of proteins with parallel ß - chains. Arch Biochem Biophys 258: 465-9.
-
(1987)
Arch Biochem Biophys
, vol.258
, pp. 465-469
-
-
Susi, H.1
Byler, D.M.2
-
63
-
-
20444366970
-
Pressure - tuning FT - IR spectroscopic study on the helix - coil transition of Ala - rich oligopeptide in aqueous solution
-
Takekiyo, T., A. Shimizu, M. Kato, and Y. Taniguchi. 2005. Pressure - tuning FT - IR spectroscopic study on the helix - coil transition of Ala - rich oligopeptide in aqueous solution. Biochim Biophys Acta 1750: 1-4.
-
(2005)
Biochim Biophys Acta
, vol.1750
, pp. 1-4
-
-
Takekiyo, T.1
Shimizu, A.2
Kato, M.3
Taniguchi, Y.4
-
64
-
-
0031402313
-
Infrared spectroscopy of proteins and peptides in lipid bilayers
-
Tamm, L. K., and S. A. Tatulian. 1997. Infrared spectroscopy of proteins and peptides in lipid bilayers. Q Rev Biophys 30: 365-429.
-
(1997)
Q Rev Biophys
, vol.30
, pp. 365-429
-
-
Tamm, L.K.1
Tatulian, S.A.2
-
65
-
-
0031584275
-
Structural changes in a secretory phospholipase A2 induced by membrane binding: a clue to interfacial activation
-
Tatulian, S. A., R.L. Biltonen, and L. K. Tamm. 1997. Structural changes in a secretory phospholipase A2 induced by membrane binding: a clue to interfacial activation? J Mol Biol 268: 809-15.
-
(1997)
J Mol Biol
, vol.268
, pp. 809-815
-
-
Tatulian, S.A.1
Biltonen, R.L.2
Tamm, L.K.3
-
66
-
-
34347397758
-
Structure and function of a mitochondrial late embryogenesis abundant protein are revealed by desiccation
-
Tolleter, D., M. Jaquinod, C. Mangavel, C. Passirani, P. Saulnier, S. Manon, E. Teyssier, N. Payet, M. H. Avelange - Macherel, and D. Macherel. 2007. Structure and function of a mitochondrial late embryogenesis abundant protein are revealed by desiccation. Plant Cell 19: 1580-9.
-
(2007)
Plant Cell
, vol.19
, pp. 1580-1589
-
-
Tolleter, D.1
Jaquinod, M.2
Mangavel, C.3
Passirani, C.4
Saulnier, P.5
Manon, S.6
Teyssier, E.7
Payet, N.8
Avelange-Macherel, M.H.9
Macherel, D.10
-
67
-
-
0001443463
-
Effects of hydration on the structure, vibrational wavenumbers, vibrational force fi eld and resonance Raman intensities of N - methylacetamide
-
Torii, H., T. Tatsumi, and M. Tasumi. 1998. Effects of hydration on the structure, vibrational wavenumbers, vibrational force fi eld and resonance Raman intensities of N - methylacetamide. J Raman Spectrosc 29: 537-46.
-
(1998)
J Raman Spectrosc
, vol.29
, pp. 537-546
-
-
Torii, H.1
Tatsumi, T.2
Tasumi, M.3
-
68
-
-
0035815664
-
Evidence for a partially folded intermediate in a - synuclein fi bril formation
-
Uversky, V. N., J. Li, and A. L. Fink. 2001. Evidence for a partially folded intermediate in a - synuclein fi bril formation. J Biol Chem 276: 10737-44.
-
(2001)
J Biol Chem
, vol.276
, pp. 10737-44
-
-
Uversky, V.N.1
Li, J.2
Fink, A.L.3
-
69
-
-
0037023699
-
Biophysical properties of the synucleins and their propensities to fi brillate: inhibition of a - synuclein assembly by beta - and gamma - synucleins
-
Uversky, V. N., J. Li, P. Souillac, I. S. Millett, S. Doniach, R. Jakes, M. Goedert, and A. L. Fink. 2002. Biophysical properties of the synucleins and their propensities to fi brillate: inhibition of a - synuclein assembly by beta - and gamma - synucleins. J Biol Chem 277: 11970-8.
-
(2002)
J Biol Chem
, vol.277
, pp. 11970-8
-
-
Uversky, V.N.1
Li, J.2
Souillac, P.3
Millett, I.S.4
Doniach, S.5
Jakes, R.6
Goedert, M.7
Fink, A.L.8
-
70
-
-
48249097986
-
Intrinsically disordered proteins in human diseases: introducing the D2 concept
-
Uversky, V. N., C. J. Oldfi eld, and A. K. Dunker. 2008. Intrinsically disordered proteins in human diseases: introducing the D2 concept. Annu Rev Biophys 37: 215-46.
-
(2008)
Annu Rev Biophys
, vol.37
, pp. 215-246
-
-
Uversky, V.N.1
Oldfi eld, C.J.2
Dunker, A.K.3
-
71
-
-
0035887070
-
Fourier transform infrared spectrometric analysis of protein conformation: effect of sampling method and stress factors
-
van de Weert, M., P. I. Haris, W. E. Hennink, and D. J. A. Crommelin. 2001. Fourier transform infrared spectrometric analysis of protein conformation: effect of sampling method and stress factors. Anal Biochem 297: 160-9.
-
(2001)
Anal Biochem
, vol.297
, pp. 160-169
-
-
van de Weert, M.1
Haris, P.I.2
Hennink, D.J.A.3
Crommelin, D.J.A.4
-
72
-
-
0345085739
-
Fourier - transform infrared spectroscopy study of dehydrated lipases from Candida antarctica B and Pseudomonas cepacia
-
Vecchio, G., F. Zambianchi, P. Zacchetti, F. Secundo, and G. Carrea. 1999. Fourier - transform infrared spectroscopy study of dehydrated lipases from Candida antarctica B and Pseudomonas cepacia. Biotechnol Bioeng 64: 545-51.
-
(1999)
Biotechnol Bioeng
, vol.64
, pp. 545-551
-
-
Vecchio, G.1
Zambianchi, F.2
Zacchetti, P.3
Secundo, F.4
Carrea, G.5
-
73
-
-
0031150139
-
Water (H 2 O and D 2 O) molar absorptivity in the 1000-4000 cm - 1 range and quantitative infrared spectroscopy of aqueous solutions
-
Venyaminov, S. Y., and F. G. Prendergast. 1997. Water (H 2 O and D 2 O) molar absorptivity in the 1000-4000 cm - 1 range and quantitative infrared spectroscopy of aqueous solutions. Anal Biochem 248: 234-45.
-
(1997)
Anal Biochem
, vol.248
, pp. 234-245
-
-
Venyaminov, S.Y.1
Prendergast, F.G.2
-
74
-
-
0035824542
-
DNA - induced alpha - helical structure in the NH2 - terminal domain of histone H1
-
Vila, R., I. Ponte, M. Collado, J. L. R. Arrondo, M. A. Jimenez, M. Rico, and P. Suau. 2001. DNA - induced alpha - helical structure in the NH2 - terminal domain of histone H1. J Biol Chem 276: 46429-35.
-
(2001)
J Biol Chem
, vol.276
, pp. 46429-35
-
-
Vila, R.1
Ponte, I.2
Collado, M.3
Arrondo, J.L.R.4
Jimenez, M.A.5
Rico, M.6
Suau, P.7
-
75
-
-
0035903114
-
Induction of secondary structure in a COOH - terminal peptide of histone H1 by interaction with the DNA - an infrared spectroscopy study
-
Vila, R., I. Ponte, M. Collado, J. L. R. Arrondo, and P. Suau. 2001. Induction of secondary structure in a COOH - terminal peptide of histone H1 by interaction with the DNA - an infrared spectroscopy study. J Biol Chem 276: 30898-903.
-
(2001)
J Biol Chem
, vol.276
, pp. 30898-903
-
-
Vila, R.1
Ponte, I.2
Collado, M.3
Arrondo, J.L.R.4
Suau, P.5
-
76
-
-
0037370999
-
The hydration of amides in helices; a comprehensive picture from molecular dynamics, IR, and NMR
-
Walsh, S. T. R., R. P. Cheng, W. W. Wright, D. O. V. Alonso, V. Daggett, J. M. Vanderkooi, and W. F. DeGrado. 2003. The hydration of amides in helices; a comprehensive picture from molecular dynamics, IR, and NMR. Protein Sci 12: 520-31.
-
(2003)
Protein Sci
, vol.12
, pp. 520-531
-
-
Walsh, S.T.R.1
Cheng, R.P.2
Wright, W.W.3
Alonso, D.O.V.4
Daggett, V.5
Vanderkooi, J.M.6
DeGrado, W.F.7
-
77
-
-
33744536180
-
Infrared spectra and molar absorption coeffi - cients of the 20 alpha amino acids in aqueous solutions in the spectral range from 1800 to 500 cm( - 1)
-
Wolpert, M., and P. Hellwig. 2006. Infrared spectra and molar absorption coeffi - cients of the 20 alpha amino acids in aqueous solutions in the spectral range from 1800 to 500 cm( - 1). Spectrochim Acta A Mol Biomol Spectrosc 64: 987-1001.
-
(2006)
Spectrochim Acta A Mol Biomol Spectrosc
, vol.64
, pp. 987-1001
-
-
Wolpert, M.1
Hellwig, P.2
-
78
-
-
0032477320
-
Regulation of ß - sheet structures within amyloid - like ß - sheet assemblage from tripeptide derivatives
-
Yamada, N., K. Ariga, M. Naito, K. Matsubara, and E. Koyama. 1998. Regulation of ß - sheet structures within amyloid - like ß - sheet assemblage from tripeptide derivatives . J Am Chem Soc 120: 12192-9.
-
(1998)
J Am Chem Soc
, vol.120
, pp. 12192-9
-
-
Yamada, N.1
Ariga, K.2
Naito, M.3
Matsubara, K.4
Koyama, E.5
-
79
-
-
0030687509
-
Characterization of alanine - rich peptides, Ac - (AAKAA)(n) - GY - NH2 (n = 1 - 4), using vibrational circular dichroism and Fourier transform infrared
-
Yoder, G., P. Pancoska, and T. A. Keiderling. 1997. Characterization of alanine - rich peptides, Ac - (AAKAA)(n) - GY - NH2 (n = 1 - 4), using vibrational circular dichroism and Fourier transform infrared. Conformational determination and thermal unfolding. Biochemistry 36: 15123-33.
-
(1997)
Conformational determination and thermal unfolding. Biochemistry
, vol.36
, pp. 15123-33
-
-
Yoder, G.1
Pancoska, P.2
Keiderling, T.A.3
-
80
-
-
9344243513
-
FTIR reveals structural differences between native ß - sheet proteins and amyloid fi brils
-
Zandomeneghi, G., M. R. H. Krebs, M. G. McCammon, and M. Fandrich. 2004. FTIR reveals structural differences between native ß - sheet proteins and amyloid fi brils. Protein Sci 13: 3314-21.
-
(2004)
Protein Sci
, vol.13
, pp. 3314-3321
-
-
Zandomeneghi, G.1
Krebs, M.R.H.2
McCammon, M.G.3
Fandrich, M.4
-
81
-
-
15744400209
-
Probing conformational changes of proteins by quantitative second - derivative infrared spectroscopy
-
Zhang, J., and Y. B. Yan. 2005. Probing conformational changes of proteins by quantitative second - derivative infrared spectroscopy. Anal Biochem 340: 89-98.
-
(2005)
Anal Biochem
, vol.340
, pp. 89-98
-
-
Zhang, J.1
Yan, Y.B.2
|