Receptor diversity and host interaction of bacteriophages infecting Salmonella enterica Serovar Typhimurium

PLoS ONE

Volumn 7, Issue 8, 2012, Pages

  Shin, Hakdong ^a   Lee, Ju Hoon ^b   Kim, Hyeryen ^a   Choi, Younho ^a   Heu, Sunggi ^c   Ryu, Sangryeol ^a  

^a Seoul National University   (South Korea)

^b Kyung Hee University   (South Korea)

^c National Institute of Animal Science   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

O ANTIGEN; OUTER MEMBRANE PROTEIN; OUTER MEMBRANE PROTEIN BTUB; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL FLAGELLUM; BACTERIOPHAGE; CROSS RESISTANCE; HOST PATHOGEN INTERACTION; NONHUMAN; SALMONELLA TYPHIMURIUM; STRAIN DIFFERENCE; TRANSMISSION ELECTRON MICROSCOPY;

BACTERIAL PROTEINS; BACTERIOPHAGES; FOOD MICROBIOLOGY; HOST-PATHOGEN INTERACTIONS; MULTIGENE FAMILY; RECEPTORS, CELL SURFACE; SALMONELLA TYPHIMURIUM;

EID: 84865162684     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0043392     Document Type: Article

References (70)

1. García P, Martínez B, Obeso JM, Rodríguez A, (2008) Bacteriophages and their application in food safety. Lett Appl Microbiol 47: 479-485.
2. O'Flaherty S, Ross RP, Coffey A, (2009) Bacteriophage and their lysins for elimination of infectious bacteria. FEMS Microbiol Rev 33: 801-819.
3. Cann AJ (1993) Principles of Molecular Virology. New York: Harcourt Brace and Co. Publ. 224 p.
4. Bruttin A, Brussow H, (2005) Human volunteers receiving Escherichia coli phage T4 orally: a safety test of phage therapy. Antimicrob Agents Chemother 49: 2874-2878.
5. Cairns BJ, Payne RJH, (2008) Bacteriophage Therapy and the Mutant Selection Window. Antimicrob Agents Chemother 52: 4344-4350.
6. CDC (2007) Bacterial Foodborne and Diarrheal Disease National Case Surveillance, Annual Report 2005. US Department of Health and Human Services, CDC.
7. Mead PS, Slutsker L, Dietz V, McCaig LF, Bresee JS, et al. (1999) Food-related illness and death in the United States. US Department of Health and Human Services, CDC.
8. CDC (2008) Salmonella Surveillance: Annual Summary, 2006. US Department of Health and Human Services, CDC.
9. McLaughlin MR, King RA, (2008) Characterization of Salmonella bacteriophages isolated from swine lagoon effluent. Curr Microbiol 56: 208-213.
10. Higgins JP, Andreatti Filho RL, Higgins SE, Wolfenden AD, Tellez G, et al. (2008) Evaluation of Salmonella-lytic properties of bacteriophages isolated from commercial broiler houses. Avian Dis 52: 139-142.
11. McLaughlin MR, Balaa MF, Sims J, King R, (2006) Isolation of Salmonella bacteriophages from swine effluent lagoons. J Environ Qual 35: 522-528.
12. O'Flynn G, Coffey A, Fitzgerald GF, Ross RP, (2006) The newly isolated lytic bacteriophages st104a and st104b are highly virulent against Salmonella enterica. J Appl Microbiol 101: 251-259.
13. Kagawa H, Ono N, Enomoto M, Komeda Y, (1984) Bacteriophage chi sensitivity and motility of Escherichia coli K-12 and Salmonella typhimurium Fla- mutants possessing the hook structure. J Bacteriol 157: 649-654.
14. Atterbury RJ, Van Bergen MAP, Ortiz F, Lovell MA, Harris JA, et al. (2007) Bacteriophage therapy to reduce Salmonella colonization of broiler chickens. Appl Environ Microbiol 73: 4543-4549.
15. Andreatti Filho RL, Higgins JP, Higgins SE, Gaona G, Wolfenden AD, et al. (2007) Ability of bacteriophages isolated from different sources to reduce Salmonella enterica serovar Enteritidis in vitro and in vivo. Poult Sci 86: 1904-1909.
16. Greer GG, (2005) Bacteriophage control of foodborne bacteria. J Food Prot 68: 1102-1111.
17. Carey-Smith GV, Billington C, Cornelius AJ, Hudson JA, Heinemann JA, (2006) Isolation and characterization of bacteriophages infecting Salmonella spp. FEMS Microbiol Lett 258: 182-186.
18. Ye J, Kostrzynska M, Dunfield K, Warriner K, (2010) Control of Salmonella on sprouting mung bean and alfalfa seeds by using a biocontrol preparation based on antagonistic bacteria and lytic bacteriophages. J Food Prot 73: 9-17.
19. Chan RK, Botstein D, Watanabe T, Ogata Y, (1972) Specialized transduction of tetracycline resistance by phage P22 in Salmonella typhimurium: II. Properties of a high-frequency-transducing lysate. Virol 50: 883-898.
20. Hudson JA, Billington C, Carey-Smith G, Greening G, (2005) Bacteriophages as biocontrol agents in food. J Food Prot 68: 426-437.
21. Zhang J, Kraft BL, Pan Y, Wall SK, Saez AC, et al. (2010) Development of an anti-Salmonella phage cocktail with increased host range. Foodborne Pathog Dis 7: 1415-1419.
22. Mahichi F, Synnott AJ, Yamamichi K, Osada T, Tanji Y, (2009) Site-specific recombination of T2 phage using IP008 long tail fiber genes provides a targeted method for expanding host range while retaining lytic activity. FEMS Microbiol Lett 295: 211-217.
23. Casjens SR, Gilcrease EB, Winn-Stapley DA, Schicklmaier P, Schmieger H, et al. (2005) The generalized transducing Salmonella bacteriophage es18: complete genome sequence and dna packaging strategy. J Bacteriol 187: 1091-1104.
24. Ricci V, Piddock LJV, (2010) Exploiting the role of TolC in pathogenicity: identification of a bacteriophage for eradication of Salmonella serovars from poultry. Appl Environ Microbiol 76: 1704-1706.
25. Hong J, Kim K-P, Heu S, Lee SJ, Adhya S, et al. (2008) Identification of host receptor and receptor-binding module of a newly sequenced T5-like phage EPS7. FEMS Microbiol Lett 289: 202-209.
26. Kim M, Ryu S, (2011) Characterization of a T5-like coliphage SPC35 and differential development of resistance to SPC35 in Salmonella Typhimurium and Escherichia coli. Appl Environ Microbiol 77: 2042-2050.
27. Ho TD, Slauch JM, (2001) OmpC is the receptor for Gifsy-1 and Gifsy-2 bacteriophages of Salmonella. J Bacteriol 183: 1495-1498.
28. Pickard D, Toribio AL, Petty NK, de Tonder A, Yu L, et al. (2010) A conserved acetyl esterase domain targets diverse bacteriophage to the Vi capsular receptor of Salmonella enterica serovar Typhi. J Bacteriol 192: 5746-5754.
29. Salgado CJ, Zayas M, Villafane R, (2004) Homology Between Two Different Salmonella phages: Salmonella enterica serovar Typhimurium phage P22 and Salmonella enterica serovar Anatum var. 15+ phage ε34. Virus Genes 29: 87-98.
30. Erickson M, Newman D, Helm RA, Dino A, Calcutt M, et al. (2009) Competition among isolates of Salmonella enterica ssp. enterica serovar Typhimurium: role of prophage/phage in archived cultures. FEMS Microbiol Lett 294: 37-44.
31. Datsenko KA, Wanner BL, (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A 97: 6640-6645.
32. Cherepanov PP, Wackernagel W, (1995) Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant. Gene 158: 9-14.
33. Chang AC, Cohen SN, (1978) Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid. J Bacteriol 134: 1141-1156.
34. Soncini FC, Vescovi EG, Groisman EA, (1995) Transcriptional autoregulation of the Salmonella typhimurium phoPQ operon. J Bacteriol 177: 4364-4371.
35. Fauquet C (2005) Virus taxonomy: classification and nomenclature of viruses: 8th report of the International Committee on the Taxonomy of Viruses. San Diego: Elsevier Academic Press.
36. Hwang S, Kim M, Ryu S, Jeon B, (2011) Regulation of oxidative stress response by CosR, an essential response regulator in Campylobacter jejuni. PLoS ONE 6: e22300.
37. Ogushi K-I, Wada A, Niidome T, Mori N, Oishi K, et al. (2001) Salmonella enteritidis FliC (flagella filament protein) induces human β-defensin-2 mRNA production by caco-2 cells. J Biol Chem 276: 30521-30526.
38. Kutsukake K, Nakashima H, Tominaga A, Abo T, (2006) Two DNA invertases contribute to flagellar phase variation in Salmonella enterica serovar Typhimurium strain LT2. J Bacteriol 188: 950-957.
39. Jiang SC, Kellogg CA, Paul JH, (1998) Characterization of marine temperate phage-host systems isolated from Mamala bay, Oahu, Hawaii. Appl Environ Microbiol 64: 535-542.
40. Ackermann HW, DuBow MS (1987) Viruses of prokaryotes, vol. 1. General properties of bacteriophages. CRC Press, Boca Raton, FL.
41. Hofer B, Ruge M, Dreiseikelmann B, (1995) The superinfection exclusion gene (sieA) of bacteriophage P22: identification and overexpression of the gene and localization of the gene product. J Bacteriol 177: 3080-3086.
42. Berngruber TW, Weissing FJ, Gandon S, (2010) Inhibition of superinfection and the evolution of viral latency. J Virol 84: 10200-10208.
43. Guo L, Lim KB, Gunn JS, Bainbridge B, Darveau RP, et al. (1997) Regulation of lipid a modifications by Salmonella typhimurium virulence genes phoP-phoQ. Science 276: 250-253.
44. Ernst RK, Guina T, Miller SI, (2001) Salmonella typhimurium outer membrane remodeling: role in resistance to host innate immunity. Microbes Infect 3: 1327-1334.
45. Heller K, Braun V, (1982) Polymannose O-antigens of Escherichia coli, the binding sites for the reversible adsorption of bacteriophage T5+ via the L-shaped tail fibers. J Virol 41: 222-227.
46. Wang J, Jiang Y, Vincent M, Sun Y, Yu H, et al. (2005) Complete genome sequence of bacteriophage T5. Virology 332: 45-65.
47. Samuel ADT, Pitta TP, Ryu WS, Danese PN, Leung ECW, et al. (1999) Flagellar determinants of bacterial sensitivity to x-phage. Proc Natl Acad Sci U S A 96: 9863-9866.
48. Schade SZ, Adler J, Ris H, (1967) How bacteriophage chi attacks motile bacteria. J Virol 1: 599-609.
49. Chang JT, Schmid MF, Haase-Pettingell C, Weigele PR, King JA, et al. (2010) Visualizing the structural changes of bacteriophage epsilon15 and its Salmonella host during infection. J Mol Biol 402: 731-740.
50. Jiang W, Chang J, Jakana J, Weigele P, King J, et al. (2006) Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus. Nature 439: 612-616.
51. Israel V, Rosen H, Levine M, (1972) Binding of bacteriophage P22 tail parts to cells. J Virol 10: 1152-1158.
52. Kruger DH, Schroeder C, (1981) Bacteriophage T3 and bacteriophage T7 virus-host cell interactions. Microbiol Rev 45: 9-51.
53. Serwer P, Hayes SJ, Thomas JA, Demeler B, Hardies SC, (2009) Isolation of novel large and aggregating bacteriophages. Methods Mol Biol 501: 55-66.
54. Lee J-H, Shin H, Kim H, Ryu S, (2011) Complete genome sequence of Salmonella bacteriophage SPN3US. J Virol 85: 13470-13471.
55. Santos SB, Kropinski AM, Ceyssens P-J, Ackermann H-W, Villegas A, et al. (2011) Genomic and proteomic characterization of the broad-host-range Salmonella phage PVP-SE1: creation of a new phage genus. J Virol 85: 11265-11273.
56. Park M, Lee J-H, Shin H, Kim M, Choi J, et al. (2012) Characterization and comparative genomic analysis of a novel bacteriophage, SFP10, simultaneously inhibiting both Salmonella enterica and Escherichia coli O157: H7. Appl Environ Microbiol 78: 58-69.
57. Anany H, Lingohr E, Villegas A, Ackermann H-W, She Y-M, et al. (2011) A Shigella boydii bacteriophage which resembles Salmonella phage ViI. Virol J 8: 242.
58. Paul JH, (2008) Prophages in marine bacteria: dangerous molecular time bombs or the key to survival in the seas? ISME J 2: 579-589.
59. Villafane R, Zayas M, Gilcrease E, Kropinski A, Casjens S, (2008) Genomic analysis of bacteriophage ε34 of Salmonella enterica serovar Anatum (15+). BMC Microbiol 8: 227-239.
60. Kropinski AM, Kovalyova IV, Billington SJ, Patrick AN, Butts BD, et al. (2007) The genome of ε15, a serotype-converting, Group E1 Salmonella enterica-specific bacteriophage. Virol 369: 234-244.
61. Shin H, Lee J-H, Lim JA, Kim H, Ryu S, (2012) Complete genome sequence of Salmonella enterica serovar typhimurium bacteriophage SPN1S. J Virol 86: 1284-1285.
62. Labrie SJ, Samson JE, Moineau S, (2010) Bacteriophage resistance mechanisms. Nat Rev Micro 8: 317-327.
63. Deveau H, Barrangou R, Garneau JE, Labonté J, Fremaux C, et al. (2008) Phage response to CRISPR-encoded resistance in Streptococcus thermophilus. J Bacteriol 190: 1390-1400.
64. Wilson GG, Murray NE, (1991) Restriction and modification systems. Annu Rev Genet 25: 585-627.
65. Hill C, Pierce K, Klaenhammer TR, (1989) The conjugative plasmid pTR2030 encodes two bacteriophage defense mechanisms in lactococci, restriction modification (R+/M+) and abortive infection (Hsp+). Appl Environ Microb 55: 2416-2419.
66. Zhang X, Kelly SM, Bollen WS, Curtiss R, (1997) Characterization and immunogenicity of Salmonella typhimurium SL1344 and UK-1 Δcrp and Δcdt deletion mutants. Infect Immun 65: 5381-5387.
67. McClelland M, Sanderson KE, Spieth J, Clifton SW, Latreille P, et al. (2001) Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. Nature 413: 852-856.
68. Poppe C, Smart N, Khakhria R, Johnson W, Spika J, et al. (1998) Salmonella typhimurium DT104: a virulent and drug-resistant pathogen. Can Vet J 39: 559-565.
69. Hayashi K, Morooka N, Yamamoto Y, Fujita K, Isono K, et al. (2006) Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol Syst Biol 2: 2006.0007.
70. Durfee T, Nelson R, Baldwin S, Plunkett G, Burland V, et al. (2008) The complete genome sequence of Escherichia coli DH10B: Insights into the biology of a laboratory workhorse. J Bacteriol 190: 2597-2606.