-
1
-
-
0027190489
-
Circadian rhythms in prokaryotes: luciferase as a reporter of circadian gene expression in cyanobacteria
-
Kondo T, Strayer CA, Kulkarni RD, Taylor W, Ishiura M, et al. (1993) Circadian rhythms in prokaryotes: luciferase as a reporter of circadian gene expression in cyanobacteria. Proc Natl Acad Sci U S A 90: 5672-5676.
-
(1993)
Proc Natl Acad Sci U S A
, vol.90
, pp. 5672-5676
-
-
Kondo, T.1
Strayer, C.A.2
Kulkarni, R.D.3
Taylor, W.4
Ishiura, M.5
-
2
-
-
1842456940
-
Cyanobacterial circadian clocks-timing is everything
-
Golden SS, Canales SR, (2003) Cyanobacterial circadian clocks-timing is everything. Nat Rev Microbiol 1: 191-199.
-
(2003)
Nat Rev Microbiol
, vol.1
, pp. 191-199
-
-
Golden, S.S.1
Canales, S.R.2
-
3
-
-
50849102663
-
A cyanobacterial circadian clockwork
-
Johnson CH, Mori T, Xu Y, (2008) A cyanobacterial circadian clockwork. Curr Biol 18: R816-R825.
-
(2008)
Curr Biol
, vol.18
-
-
Johnson, C.H.1
Mori, T.2
Xu, Y.3
-
4
-
-
78349307885
-
Simplicity and complexity in the cyanobacterial circadian clock mechanism
-
Dong G, Kim YI, Golden SS, (2010) Simplicity and complexity in the cyanobacterial circadian clock mechanism. Curr Opin Genet Dev 20: 619-625.
-
(2010)
Curr Opin Genet Dev
, vol.20
, pp. 619-625
-
-
Dong, G.1
Kim, Y.I.2
Golden, S.S.3
-
5
-
-
77949826561
-
Circadian gating of the cell cycle revealed in single cyanobacterial cells
-
Yang Q, Pando BF, Dong G, Golden SS, van Oudenaarden A, (2010) Circadian gating of the cell cycle revealed in single cyanobacterial cells. Science 327: 1522-1526.
-
(2010)
Science
, vol.327
, pp. 1522-1526
-
-
Yang, Q.1
Pando, B.F.2
Dong, G.3
Golden, S.S.4
van Oudenaarden, A.5
-
6
-
-
0033104504
-
Physical interactions among circadian clock proteins KaiA, KaiB and KaiC in cyanobacteria
-
Iwasaki H, Taniguchi Y, Ishiura M, Kondo T, (1999) Physical interactions among circadian clock proteins KaiA, KaiB and KaiC in cyanobacteria. Embo J 18: 1137-1145.
-
(1999)
Embo J
, vol.18
, pp. 1137-1145
-
-
Iwasaki, H.1
Taniguchi, Y.2
Ishiura, M.3
Kondo, T.4
-
7
-
-
0037881861
-
KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system
-
Kitayama Y, Iwasaki H, Nishiwaki T, Kondo T, (2003) KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system. Embo J 22: 2127-2134.
-
(2003)
Embo J
, vol.22
, pp. 2127-2134
-
-
Kitayama, Y.1
Iwasaki, H.2
Nishiwaki, T.3
Kondo, T.4
-
9
-
-
17244373578
-
Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro
-
Nakajima M, Imai K, Ito H, Nishiwaki T, Murayama Y, et al. (2005) Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro. Science 308: 414-415.
-
(2005)
Science
, vol.308
, pp. 414-415
-
-
Nakajima, M.1
Imai, K.2
Ito, H.3
Nishiwaki, T.4
Murayama, Y.5
-
10
-
-
0037180442
-
KaiA-stimulated KaiC phosphorylation in circadian timing loops in cyanobacteria
-
Iwasaki H, Nishiwaki T, Kitayama Y, Nakajima M, Kondo T, (2002) KaiA-stimulated KaiC phosphorylation in circadian timing loops in cyanobacteria. Proc Natl Acad Sci U S A 99: 15788-15793.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 15788-15793
-
-
Iwasaki, H.1
Nishiwaki, T.2
Kitayama, Y.3
Nakajima, M.4
Kondo, T.5
-
11
-
-
0034602708
-
Nucleotide binding and autophosphorylation of the clock protein KaiC as a circadian timing process of cyanobacteria
-
Nishiwaki T, Iwasaki H, Ishiura M, Kondo T, (2000) Nucleotide binding and autophosphorylation of the clock protein KaiC as a circadian timing process of cyanobacteria. Proc Natl Acad Sci U S A 97: 495-499.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 495-499
-
-
Nishiwaki, T.1
Iwasaki, H.2
Ishiura, M.3
Kondo, T.4
-
12
-
-
0037180437
-
Structure and function from the circadian clock protein KaiA of Synechococcus elongatus: a potential clock input mechanism
-
Williams SB, Vakonakis I, Golden SS, LiWang AC, (2002) Structure and function from the circadian clock protein KaiA of Synechococcus elongatus: a potential clock input mechanism. Proc Natl Acad Sci U S A 99: 15357-15362.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 15357-15362
-
-
Williams, S.B.1
Vakonakis, I.2
Golden, S.S.3
LiWang, A.C.4
-
13
-
-
34548382214
-
A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria
-
Nishiwaki T, Satomi Y, Kitayama Y, Terauchi K, Kiyohara R, et al. (2007) A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria. Embo J 26: 4029-4037.
-
(2007)
Embo J
, vol.26
, pp. 4029-4037
-
-
Nishiwaki, T.1
Satomi, Y.2
Kitayama, Y.3
Terauchi, K.4
Kiyohara, R.5
-
14
-
-
37549018348
-
Ordered phosphorylation governs oscillation of a three-protein circadian clock
-
Rust MJ, Markson JS, Lane WS, Fisher DS, O'Shea EK, (2007) Ordered phosphorylation governs oscillation of a three-protein circadian clock. Science 318: 809-812.
-
(2007)
Science
, vol.318
, pp. 809-812
-
-
Rust, M.J.1
Markson, J.S.2
Lane, W.S.3
Fisher, D.S.4
O'Shea, E.K.5
-
15
-
-
56949083657
-
How a cyanobacterium tells time
-
Dong G, Golden SS, (2008) How a cyanobacterium tells time. Curr Opin Microbiol 11: 541-546.
-
(2008)
Curr Opin Microbiol
, vol.11
, pp. 541-546
-
-
Dong, G.1
Golden, S.S.2
-
16
-
-
34247232450
-
Elucidating the ticking of an in vitro circadian clockwork
-
Mori T, Williams DR, Byrne MO, Qin X, Egli M, et al. (2007) Elucidating the ticking of an in vitro circadian clockwork. PLoS Biol 5: e93.
-
(2007)
PLoS Biol
, vol.5
-
-
Mori, T.1
Williams, D.R.2
Byrne, M.O.3
Qin, X.4
Egli, M.5
-
17
-
-
33746147001
-
Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro
-
Kageyama H, Nishiwaki T, Nakajima M, Iwasaki H, Oyama T, et al. (2006) Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro. Mol Cell 23: 161-171.
-
(2006)
Mol Cell
, vol.23
, pp. 161-171
-
-
Kageyama, H.1
Nishiwaki, T.2
Nakajima, M.3
Iwasaki, H.4
Oyama, T.5
-
18
-
-
48249084897
-
A cyanobacterial circadian clock based on the Kai oscillator
-
Kondo T, (2007) A cyanobacterial circadian clock based on the Kai oscillator. Cold Spring Harb Symp Quant Biol 72: 47-55.
-
(2007)
Cold Spring Harb Symp Quant Biol
, vol.72
, pp. 47-55
-
-
Kondo, T.1
-
19
-
-
84856241465
-
Fluorescence correlation spectroscopy to monitor Kai protein-based circadian oscillations in real time
-
Goda K, Ito H, Kondo T, Oyama T, (2012) Fluorescence correlation spectroscopy to monitor Kai protein-based circadian oscillations in real time. J Biol Chem 287 (5): 3241-3248.
-
(2012)
J Biol Chem
, vol.287
, Issue.5
, pp. 3241-3248
-
-
Goda, K.1
Ito, H.2
Kondo, T.3
Oyama, T.4
-
20
-
-
34250637942
-
An allosteric model of circadian KaiC phosphorylation
-
van Zon JS, Lubensky DK, Altena PR, ten Wolde PR, (2007) An allosteric model of circadian KaiC phosphorylation. Proc Natl Acad Sci U S A 104: 7420-7425.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 7420-7425
-
-
van Zon, J.S.1
Lubensky, D.K.2
Altena, P.R.3
ten Wolde, P.R.4
-
21
-
-
33746582415
-
Circadian rhythmicity by autocatalysis
-
Mehra A, Hong CI, Shi M, Loros JJ, Dunlap JC, et al. (2006) Circadian rhythmicity by autocatalysis. PLoS Comput Biol 2: e96.
-
(2006)
PLoS Comput Biol
, vol.2
-
-
Mehra, A.1
Hong, C.I.2
Shi, M.3
Loros, J.J.4
Dunlap, J.C.5
-
22
-
-
33947230522
-
Functioning and robustness of a bacterial circadian clock
-
Clodong S, Duhring U, Kronk L, Wilde A, Axmann I, et al. (2007) Functioning and robustness of a bacterial circadian clock. Mol Syst Biol 3: 90.
-
(2007)
Mol Syst Biol
, vol.3
, pp. 90
-
-
Clodong, S.1
Duhring, U.2
Kronk, L.3
Wilde, A.4
Axmann, I.5
-
23
-
-
55849125779
-
Monomer-shuffling and allosteric transition in KaiC circadian oscillation
-
Yoda M, Eguchi K, Terada TP, Sasai M, (2007) Monomer-shuffling and allosteric transition in KaiC circadian oscillation. PLoS ONE 2: e408.
-
(2007)
PLoS ONE
, vol.2
-
-
Yoda, M.1
Eguchi, K.2
Terada, T.P.3
Sasai, M.4
-
24
-
-
73449087995
-
Circadian KaiC phosphorylation: a multi-layer network
-
Li C, Chen X, Wang P, Wang W, (2009) Circadian KaiC phosphorylation: a multi-layer network. PLoS Comput Biol 5: e1000568.
-
(2009)
PLoS Comput Biol
, vol.5
-
-
Li, C.1
Chen, X.2
Wang, P.3
Wang, W.4
-
25
-
-
77958163101
-
A sequestration feedback determines dynamics and temperature entrainment of the KaiABC circadian clock
-
Brettschneider C, Rose RJ, Hertel S, Axmann IM, Heck AJ, et al. (2010) A sequestration feedback determines dynamics and temperature entrainment of the KaiABC circadian clock. Mol Syst Biol 6: 389.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 389
-
-
Brettschneider, C.1
Rose, R.J.2
Hertel, S.3
Axmann, I.M.4
Heck, A.J.5
-
26
-
-
77957054558
-
Intermolecular associations determine the dynamics of the circadian KaiABC oscillator
-
Qin X, Byrne M, Mori T, Zou P, Williams DR, et al. (2010) Intermolecular associations determine the dynamics of the circadian KaiABC oscillator. Proc Natl Acad Sci U S A 107: 14805-14810.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 14805-14810
-
-
Qin, X.1
Byrne, M.2
Mori, T.3
Zou, P.4
Williams, D.R.5
-
27
-
-
33748441404
-
A model for the circadian rhythm of cyanobacteria that maintains oscillation without gene expression
-
Kurosawa G, Aihara K, Iwasa Y, (2006) A model for the circadian rhythm of cyanobacteria that maintains oscillation without gene expression. Biophys J 91: 2015-2023.
-
(2006)
Biophys J
, vol.91
, pp. 2015-2023
-
-
Kurosawa, G.1
Aihara, K.2
Iwasa, Y.3
-
28
-
-
40849145295
-
Assembly and disassembly dynamics of the cyanobacterial periodosome
-
Akiyama S, Nohara A, Ito K, Maeda Y, (2008) Assembly and disassembly dynamics of the cyanobacterial periodosome. Mol Cell 29: 703-716.
-
(2008)
Mol Cell
, vol.29
, pp. 703-716
-
-
Akiyama, S.1
Nohara, A.2
Ito, K.3
Maeda, Y.4
-
29
-
-
1842424983
-
An improved cyan fluorescent protein variant useful for FRET
-
Rizzo MA, Springer GH, Granada B, Piston DW, (2004) An improved cyan fluorescent protein variant useful for FRET. Nat Biotechnol 22: 445-449.
-
(2004)
Nat Biotechnol
, vol.22
, pp. 445-449
-
-
Rizzo, M.A.1
Springer, G.H.2
Granada, B.3
Piston, D.W.4
-
30
-
-
0036138908
-
A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications
-
Nagai T, Ibata K, Park ES, Kubota M, Mikoshiba K, et al. (2002) A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications. Nat Biotechnol 20: 87-90.
-
(2002)
Nat Biotechnol
, vol.20
, pp. 87-90
-
-
Nagai, T.1
Ibata, K.2
Park, E.S.3
Kubota, M.4
Mikoshiba, K.5
-
31
-
-
33646593201
-
Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods
-
Pattanayek R, Williams DR, Pattanayek S, Xu Y, Mori T, et al. (2006) Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods. Embo J 25: 2017-2028.
-
(2006)
Embo J
, vol.25
, pp. 2017-2028
-
-
Pattanayek, R.1
Williams, D.R.2
Pattanayek, S.3
Xu, Y.4
Mori, T.5
-
32
-
-
51349134181
-
The day/night switch in KaiC, a central oscillator component of the circadian clock of cyanobacteria
-
Kim YI, Dong G, Carruthers CW Jr, Golden SS, LiWang A, (2008) The day/night switch in KaiC, a central oscillator component of the circadian clock of cyanobacteria. Proc Natl Acad Sci U S A 105: 12825-12830.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 12825-12830
-
-
Kim, Y.I.1
Dong, G.2
Carruthers Jr., C.W.3
Golden, S.S.4
LiWang, A.5
-
33
-
-
47049084270
-
Structural model of the circadian clock KaiB-KaiC complex and mechanism for modulation of KaiC phosphorylation
-
Pattanayek R, Williams DR, Pattanayek S, Mori T, Johnson CH, et al. (2008) Structural model of the circadian clock KaiB-KaiC complex and mechanism for modulation of KaiC phosphorylation. Embo J 27: 1767-1778.
-
(2008)
Embo J
, vol.27
, pp. 1767-1778
-
-
Pattanayek, R.1
Williams, D.R.2
Pattanayek, S.3
Mori, T.4
Johnson, C.H.5
-
34
-
-
0035963331
-
Spatio-temporal images of growth-factor-induced activation of Ras and Rap1
-
Mochizuki N, Yamashita S, Kurokawa K, Ohba Y, Nagai T, et al. (2001) Spatio-temporal images of growth-factor-induced activation of Ras and Rap1. Nature 411: 1065-1068.
-
(2001)
Nature
, vol.411
, pp. 1065-1068
-
-
Mochizuki, N.1
Yamashita, S.2
Kurokawa, K.3
Ohba, Y.4
Nagai, T.5
-
35
-
-
0035442412
-
The use of FRET imaging microscopy to detect protein-protein interactions and protein conformational changes in vivo
-
Truong K, Ikura M, (2001) The use of FRET imaging microscopy to detect protein-protein interactions and protein conformational changes in vivo. Curr Opin Struct Biol 11: 573-578.
-
(2001)
Curr Opin Struct Biol
, vol.11
, pp. 573-578
-
-
Truong, K.1
Ikura, M.2
-
36
-
-
41149123332
-
ATPase activity and its temperature compensation of the cyanobacterial clock protein KaiC
-
Murakami R, Miyake A, Iwase R, Hayashi F, Uzumaki T, et al. (2008) ATPase activity and its temperature compensation of the cyanobacterial clock protein KaiC. Genes Cells 13: 387-395.
-
(2008)
Genes Cells
, vol.13
, pp. 387-395
-
-
Murakami, R.1
Miyake, A.2
Iwase, R.3
Hayashi, F.4
Uzumaki, T.5
-
37
-
-
36049042660
-
ATPase activity of KaiC determines the basic timing for circadian clock of cyanobacteria
-
Terauchi K, Kitayama Y, Nishiwaki T, Miwa K, Murayama Y, et al. (2007) ATPase activity of KaiC determines the basic timing for circadian clock of cyanobacteria. Proc Natl Acad Sci U S A 104: 16377-16381.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 16377-16381
-
-
Terauchi, K.1
Kitayama, Y.2
Nishiwaki, T.3
Miwa, K.4
Murayama, Y.5
-
38
-
-
35848958822
-
Autonomous synchronization of the circadian KaiC phosphorylation rhythm
-
Ito H, Kageyama H, Mutsuda M, Nakajima M, Oyama T, et al. (2007) Autonomous synchronization of the circadian KaiC phosphorylation rhythm. Nat Struct Mol Biol 14: 1084-1088.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 1084-1088
-
-
Ito, H.1
Kageyama, H.2
Mutsuda, M.3
Nakajima, M.4
Oyama, T.5
-
39
-
-
12244296161
-
No transcription-translation feedback in circadian rhythm of KaiC phosphorylation
-
Tomita J, Nakajima M, Kondo T, Iwasaki H, (2005) No transcription-translation feedback in circadian rhythm of KaiC phosphorylation. Science 307: 251-254.
-
(2005)
Science
, vol.307
, pp. 251-254
-
-
Tomita, J.1
Nakajima, M.2
Kondo, T.3
Iwasaki, H.4
-
40
-
-
38449111863
-
Systems biology. A clock with a flip switch
-
Poon AC, Ferrell JE Jr, (2007) Systems biology. A clock with a flip switch. Science 318: 757-758.
-
(2007)
Science
, vol.318
, pp. 757-758
-
-
Poon, A.C.1
Ferrell Jr., J.E.2
-
41
-
-
71349084249
-
The molecular clockwork of a protein-based circadian oscillator
-
Markson JS, O'Shea EK, (2009) The molecular clockwork of a protein-based circadian oscillator. FEBS Lett 583: 3938-3947.
-
(2009)
FEBS Lett
, vol.583
, pp. 3938-3947
-
-
Markson, J.S.1
O'Shea, E.K.2
-
42
-
-
4644310259
-
Role of KaiC phosphorylation in the circadian clock system of Synechococcus elongatus PCC 7942
-
Nishiwaki T, Satomi Y, Nakajima M, Lee C, Kiyohara R, et al. (2004) Role of KaiC phosphorylation in the circadian clock system of Synechococcus elongatus PCC 7942. Proc Natl Acad Sci U S A 101: 13927-13932.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 13927-13932
-
-
Nishiwaki, T.1
Satomi, Y.2
Nakajima, M.3
Lee, C.4
Kiyohara, R.5
|