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Volumn 7, Issue 8, 2012, Pages

Quantifying the rhythm of KaiB-C interaction for in vitro cyanobacterial circadian clock

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; PROTEIN KAIB; PROTEIN KAIC; SERINE; UNCLASSIFIED DRUG;

EID: 84864972806     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0042581     Document Type: Article
Times cited : (14)

References (42)
  • 1
    • 0027190489 scopus 로고
    • Circadian rhythms in prokaryotes: luciferase as a reporter of circadian gene expression in cyanobacteria
    • Kondo T, Strayer CA, Kulkarni RD, Taylor W, Ishiura M, et al. (1993) Circadian rhythms in prokaryotes: luciferase as a reporter of circadian gene expression in cyanobacteria. Proc Natl Acad Sci U S A 90: 5672-5676.
    • (1993) Proc Natl Acad Sci U S A , vol.90 , pp. 5672-5676
    • Kondo, T.1    Strayer, C.A.2    Kulkarni, R.D.3    Taylor, W.4    Ishiura, M.5
  • 2
    • 1842456940 scopus 로고    scopus 로고
    • Cyanobacterial circadian clocks-timing is everything
    • Golden SS, Canales SR, (2003) Cyanobacterial circadian clocks-timing is everything. Nat Rev Microbiol 1: 191-199.
    • (2003) Nat Rev Microbiol , vol.1 , pp. 191-199
    • Golden, S.S.1    Canales, S.R.2
  • 3
    • 50849102663 scopus 로고    scopus 로고
    • A cyanobacterial circadian clockwork
    • Johnson CH, Mori T, Xu Y, (2008) A cyanobacterial circadian clockwork. Curr Biol 18: R816-R825.
    • (2008) Curr Biol , vol.18
    • Johnson, C.H.1    Mori, T.2    Xu, Y.3
  • 4
    • 78349307885 scopus 로고    scopus 로고
    • Simplicity and complexity in the cyanobacterial circadian clock mechanism
    • Dong G, Kim YI, Golden SS, (2010) Simplicity and complexity in the cyanobacterial circadian clock mechanism. Curr Opin Genet Dev 20: 619-625.
    • (2010) Curr Opin Genet Dev , vol.20 , pp. 619-625
    • Dong, G.1    Kim, Y.I.2    Golden, S.S.3
  • 5
    • 77949826561 scopus 로고    scopus 로고
    • Circadian gating of the cell cycle revealed in single cyanobacterial cells
    • Yang Q, Pando BF, Dong G, Golden SS, van Oudenaarden A, (2010) Circadian gating of the cell cycle revealed in single cyanobacterial cells. Science 327: 1522-1526.
    • (2010) Science , vol.327 , pp. 1522-1526
    • Yang, Q.1    Pando, B.F.2    Dong, G.3    Golden, S.S.4    van Oudenaarden, A.5
  • 6
    • 0033104504 scopus 로고    scopus 로고
    • Physical interactions among circadian clock proteins KaiA, KaiB and KaiC in cyanobacteria
    • Iwasaki H, Taniguchi Y, Ishiura M, Kondo T, (1999) Physical interactions among circadian clock proteins KaiA, KaiB and KaiC in cyanobacteria. Embo J 18: 1137-1145.
    • (1999) Embo J , vol.18 , pp. 1137-1145
    • Iwasaki, H.1    Taniguchi, Y.2    Ishiura, M.3    Kondo, T.4
  • 7
    • 0037881861 scopus 로고    scopus 로고
    • KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system
    • Kitayama Y, Iwasaki H, Nishiwaki T, Kondo T, (2003) KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system. Embo J 22: 2127-2134.
    • (2003) Embo J , vol.22 , pp. 2127-2134
    • Kitayama, Y.1    Iwasaki, H.2    Nishiwaki, T.3    Kondo, T.4
  • 9
    • 17244373578 scopus 로고    scopus 로고
    • Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro
    • Nakajima M, Imai K, Ito H, Nishiwaki T, Murayama Y, et al. (2005) Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro. Science 308: 414-415.
    • (2005) Science , vol.308 , pp. 414-415
    • Nakajima, M.1    Imai, K.2    Ito, H.3    Nishiwaki, T.4    Murayama, Y.5
  • 11
    • 0034602708 scopus 로고    scopus 로고
    • Nucleotide binding and autophosphorylation of the clock protein KaiC as a circadian timing process of cyanobacteria
    • Nishiwaki T, Iwasaki H, Ishiura M, Kondo T, (2000) Nucleotide binding and autophosphorylation of the clock protein KaiC as a circadian timing process of cyanobacteria. Proc Natl Acad Sci U S A 97: 495-499.
    • (2000) Proc Natl Acad Sci U S A , vol.97 , pp. 495-499
    • Nishiwaki, T.1    Iwasaki, H.2    Ishiura, M.3    Kondo, T.4
  • 12
    • 0037180437 scopus 로고    scopus 로고
    • Structure and function from the circadian clock protein KaiA of Synechococcus elongatus: a potential clock input mechanism
    • Williams SB, Vakonakis I, Golden SS, LiWang AC, (2002) Structure and function from the circadian clock protein KaiA of Synechococcus elongatus: a potential clock input mechanism. Proc Natl Acad Sci U S A 99: 15357-15362.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 15357-15362
    • Williams, S.B.1    Vakonakis, I.2    Golden, S.S.3    LiWang, A.C.4
  • 13
    • 34548382214 scopus 로고    scopus 로고
    • A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria
    • Nishiwaki T, Satomi Y, Kitayama Y, Terauchi K, Kiyohara R, et al. (2007) A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria. Embo J 26: 4029-4037.
    • (2007) Embo J , vol.26 , pp. 4029-4037
    • Nishiwaki, T.1    Satomi, Y.2    Kitayama, Y.3    Terauchi, K.4    Kiyohara, R.5
  • 14
    • 37549018348 scopus 로고    scopus 로고
    • Ordered phosphorylation governs oscillation of a three-protein circadian clock
    • Rust MJ, Markson JS, Lane WS, Fisher DS, O'Shea EK, (2007) Ordered phosphorylation governs oscillation of a three-protein circadian clock. Science 318: 809-812.
    • (2007) Science , vol.318 , pp. 809-812
    • Rust, M.J.1    Markson, J.S.2    Lane, W.S.3    Fisher, D.S.4    O'Shea, E.K.5
  • 15
    • 56949083657 scopus 로고    scopus 로고
    • How a cyanobacterium tells time
    • Dong G, Golden SS, (2008) How a cyanobacterium tells time. Curr Opin Microbiol 11: 541-546.
    • (2008) Curr Opin Microbiol , vol.11 , pp. 541-546
    • Dong, G.1    Golden, S.S.2
  • 16
  • 17
    • 33746147001 scopus 로고    scopus 로고
    • Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro
    • Kageyama H, Nishiwaki T, Nakajima M, Iwasaki H, Oyama T, et al. (2006) Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro. Mol Cell 23: 161-171.
    • (2006) Mol Cell , vol.23 , pp. 161-171
    • Kageyama, H.1    Nishiwaki, T.2    Nakajima, M.3    Iwasaki, H.4    Oyama, T.5
  • 18
    • 48249084897 scopus 로고    scopus 로고
    • A cyanobacterial circadian clock based on the Kai oscillator
    • Kondo T, (2007) A cyanobacterial circadian clock based on the Kai oscillator. Cold Spring Harb Symp Quant Biol 72: 47-55.
    • (2007) Cold Spring Harb Symp Quant Biol , vol.72 , pp. 47-55
    • Kondo, T.1
  • 19
    • 84856241465 scopus 로고    scopus 로고
    • Fluorescence correlation spectroscopy to monitor Kai protein-based circadian oscillations in real time
    • Goda K, Ito H, Kondo T, Oyama T, (2012) Fluorescence correlation spectroscopy to monitor Kai protein-based circadian oscillations in real time. J Biol Chem 287 (5): 3241-3248.
    • (2012) J Biol Chem , vol.287 , Issue.5 , pp. 3241-3248
    • Goda, K.1    Ito, H.2    Kondo, T.3    Oyama, T.4
  • 23
    • 55849125779 scopus 로고    scopus 로고
    • Monomer-shuffling and allosteric transition in KaiC circadian oscillation
    • Yoda M, Eguchi K, Terada TP, Sasai M, (2007) Monomer-shuffling and allosteric transition in KaiC circadian oscillation. PLoS ONE 2: e408.
    • (2007) PLoS ONE , vol.2
    • Yoda, M.1    Eguchi, K.2    Terada, T.P.3    Sasai, M.4
  • 24
    • 73449087995 scopus 로고    scopus 로고
    • Circadian KaiC phosphorylation: a multi-layer network
    • Li C, Chen X, Wang P, Wang W, (2009) Circadian KaiC phosphorylation: a multi-layer network. PLoS Comput Biol 5: e1000568.
    • (2009) PLoS Comput Biol , vol.5
    • Li, C.1    Chen, X.2    Wang, P.3    Wang, W.4
  • 25
    • 77958163101 scopus 로고    scopus 로고
    • A sequestration feedback determines dynamics and temperature entrainment of the KaiABC circadian clock
    • Brettschneider C, Rose RJ, Hertel S, Axmann IM, Heck AJ, et al. (2010) A sequestration feedback determines dynamics and temperature entrainment of the KaiABC circadian clock. Mol Syst Biol 6: 389.
    • (2010) Mol Syst Biol , vol.6 , pp. 389
    • Brettschneider, C.1    Rose, R.J.2    Hertel, S.3    Axmann, I.M.4    Heck, A.J.5
  • 26
    • 77957054558 scopus 로고    scopus 로고
    • Intermolecular associations determine the dynamics of the circadian KaiABC oscillator
    • Qin X, Byrne M, Mori T, Zou P, Williams DR, et al. (2010) Intermolecular associations determine the dynamics of the circadian KaiABC oscillator. Proc Natl Acad Sci U S A 107: 14805-14810.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 14805-14810
    • Qin, X.1    Byrne, M.2    Mori, T.3    Zou, P.4    Williams, D.R.5
  • 27
    • 33748441404 scopus 로고    scopus 로고
    • A model for the circadian rhythm of cyanobacteria that maintains oscillation without gene expression
    • Kurosawa G, Aihara K, Iwasa Y, (2006) A model for the circadian rhythm of cyanobacteria that maintains oscillation without gene expression. Biophys J 91: 2015-2023.
    • (2006) Biophys J , vol.91 , pp. 2015-2023
    • Kurosawa, G.1    Aihara, K.2    Iwasa, Y.3
  • 28
    • 40849145295 scopus 로고    scopus 로고
    • Assembly and disassembly dynamics of the cyanobacterial periodosome
    • Akiyama S, Nohara A, Ito K, Maeda Y, (2008) Assembly and disassembly dynamics of the cyanobacterial periodosome. Mol Cell 29: 703-716.
    • (2008) Mol Cell , vol.29 , pp. 703-716
    • Akiyama, S.1    Nohara, A.2    Ito, K.3    Maeda, Y.4
  • 29
  • 30
    • 0036138908 scopus 로고    scopus 로고
    • A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications
    • Nagai T, Ibata K, Park ES, Kubota M, Mikoshiba K, et al. (2002) A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications. Nat Biotechnol 20: 87-90.
    • (2002) Nat Biotechnol , vol.20 , pp. 87-90
    • Nagai, T.1    Ibata, K.2    Park, E.S.3    Kubota, M.4    Mikoshiba, K.5
  • 31
    • 33646593201 scopus 로고    scopus 로고
    • Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods
    • Pattanayek R, Williams DR, Pattanayek S, Xu Y, Mori T, et al. (2006) Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods. Embo J 25: 2017-2028.
    • (2006) Embo J , vol.25 , pp. 2017-2028
    • Pattanayek, R.1    Williams, D.R.2    Pattanayek, S.3    Xu, Y.4    Mori, T.5
  • 32
    • 51349134181 scopus 로고    scopus 로고
    • The day/night switch in KaiC, a central oscillator component of the circadian clock of cyanobacteria
    • Kim YI, Dong G, Carruthers CW Jr, Golden SS, LiWang A, (2008) The day/night switch in KaiC, a central oscillator component of the circadian clock of cyanobacteria. Proc Natl Acad Sci U S A 105: 12825-12830.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 12825-12830
    • Kim, Y.I.1    Dong, G.2    Carruthers Jr., C.W.3    Golden, S.S.4    LiWang, A.5
  • 33
    • 47049084270 scopus 로고    scopus 로고
    • Structural model of the circadian clock KaiB-KaiC complex and mechanism for modulation of KaiC phosphorylation
    • Pattanayek R, Williams DR, Pattanayek S, Mori T, Johnson CH, et al. (2008) Structural model of the circadian clock KaiB-KaiC complex and mechanism for modulation of KaiC phosphorylation. Embo J 27: 1767-1778.
    • (2008) Embo J , vol.27 , pp. 1767-1778
    • Pattanayek, R.1    Williams, D.R.2    Pattanayek, S.3    Mori, T.4    Johnson, C.H.5
  • 34
    • 0035963331 scopus 로고    scopus 로고
    • Spatio-temporal images of growth-factor-induced activation of Ras and Rap1
    • Mochizuki N, Yamashita S, Kurokawa K, Ohba Y, Nagai T, et al. (2001) Spatio-temporal images of growth-factor-induced activation of Ras and Rap1. Nature 411: 1065-1068.
    • (2001) Nature , vol.411 , pp. 1065-1068
    • Mochizuki, N.1    Yamashita, S.2    Kurokawa, K.3    Ohba, Y.4    Nagai, T.5
  • 35
    • 0035442412 scopus 로고    scopus 로고
    • The use of FRET imaging microscopy to detect protein-protein interactions and protein conformational changes in vivo
    • Truong K, Ikura M, (2001) The use of FRET imaging microscopy to detect protein-protein interactions and protein conformational changes in vivo. Curr Opin Struct Biol 11: 573-578.
    • (2001) Curr Opin Struct Biol , vol.11 , pp. 573-578
    • Truong, K.1    Ikura, M.2
  • 36
    • 41149123332 scopus 로고    scopus 로고
    • ATPase activity and its temperature compensation of the cyanobacterial clock protein KaiC
    • Murakami R, Miyake A, Iwase R, Hayashi F, Uzumaki T, et al. (2008) ATPase activity and its temperature compensation of the cyanobacterial clock protein KaiC. Genes Cells 13: 387-395.
    • (2008) Genes Cells , vol.13 , pp. 387-395
    • Murakami, R.1    Miyake, A.2    Iwase, R.3    Hayashi, F.4    Uzumaki, T.5
  • 37
    • 36049042660 scopus 로고    scopus 로고
    • ATPase activity of KaiC determines the basic timing for circadian clock of cyanobacteria
    • Terauchi K, Kitayama Y, Nishiwaki T, Miwa K, Murayama Y, et al. (2007) ATPase activity of KaiC determines the basic timing for circadian clock of cyanobacteria. Proc Natl Acad Sci U S A 104: 16377-16381.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 16377-16381
    • Terauchi, K.1    Kitayama, Y.2    Nishiwaki, T.3    Miwa, K.4    Murayama, Y.5
  • 38
    • 35848958822 scopus 로고    scopus 로고
    • Autonomous synchronization of the circadian KaiC phosphorylation rhythm
    • Ito H, Kageyama H, Mutsuda M, Nakajima M, Oyama T, et al. (2007) Autonomous synchronization of the circadian KaiC phosphorylation rhythm. Nat Struct Mol Biol 14: 1084-1088.
    • (2007) Nat Struct Mol Biol , vol.14 , pp. 1084-1088
    • Ito, H.1    Kageyama, H.2    Mutsuda, M.3    Nakajima, M.4    Oyama, T.5
  • 39
    • 12244296161 scopus 로고    scopus 로고
    • No transcription-translation feedback in circadian rhythm of KaiC phosphorylation
    • Tomita J, Nakajima M, Kondo T, Iwasaki H, (2005) No transcription-translation feedback in circadian rhythm of KaiC phosphorylation. Science 307: 251-254.
    • (2005) Science , vol.307 , pp. 251-254
    • Tomita, J.1    Nakajima, M.2    Kondo, T.3    Iwasaki, H.4
  • 40
    • 38449111863 scopus 로고    scopus 로고
    • Systems biology. A clock with a flip switch
    • Poon AC, Ferrell JE Jr, (2007) Systems biology. A clock with a flip switch. Science 318: 757-758.
    • (2007) Science , vol.318 , pp. 757-758
    • Poon, A.C.1    Ferrell Jr., J.E.2
  • 41
    • 71349084249 scopus 로고    scopus 로고
    • The molecular clockwork of a protein-based circadian oscillator
    • Markson JS, O'Shea EK, (2009) The molecular clockwork of a protein-based circadian oscillator. FEBS Lett 583: 3938-3947.
    • (2009) FEBS Lett , vol.583 , pp. 3938-3947
    • Markson, J.S.1    O'Shea, E.K.2
  • 42
    • 4644310259 scopus 로고    scopus 로고
    • Role of KaiC phosphorylation in the circadian clock system of Synechococcus elongatus PCC 7942
    • Nishiwaki T, Satomi Y, Nakajima M, Lee C, Kiyohara R, et al. (2004) Role of KaiC phosphorylation in the circadian clock system of Synechococcus elongatus PCC 7942. Proc Natl Acad Sci U S A 101: 13927-13932.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 13927-13932
    • Nishiwaki, T.1    Satomi, Y.2    Nakajima, M.3    Lee, C.4    Kiyohara, R.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.